Ca_04837, Ca_04837_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_04837 vs. TrEMBL
Match: I3SCR3_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 1.507e-76 Identity = 168/228 (73.68%), Postives = 189/228 (82.89%), Query Frame = 1 Query: 1 MYYSS-TMKSHLRPP--LPKSPVR-RTRNVLPSSDSVSLQTPPGSLTKSQKPVRSPEIRPEYRTMSCEFKALARMVREEFGKQPDTTEESTIGNSCGVKSGVLFERGRLYDEYSARRNERLKRKKGVMVDREVNTAVK-PKVS--HRSLGVTVESGKKSASRKLGSLRKSVSAAYSTEVSETPRYMLRSMTKENKKPPLA-SRFDNKLGTVGEKKIGAPRRGGRITYY 660 MYYSS TMKSHLRPP +PKSP+R RTR VL DS SLQTPPGSLTKS+K V+SPE+RPEYRT++ EF+AL+RMVR+EFGK PD EE NSC KSGVLF+RG+ YDEYSARRNERLKRKKGV VD T++K PKV+ H LGVTVESGKK+ +RKLGSLRKSVSAAYS EVSETPRYMLRSMTKENKKPPLA SRFD + TVGEKK+GA RR G+I+YY Sbjct: 1 MYYSSSTMKSHLRPPRPIPKSPMRLRTRTVL---DSPSLQTPPGSLTKSRKLVQSPELRPEYRTIASEFRALSRMVRDEFGK-PDP-EEIAGTNSCNPKSGVLFQRGKFYDEYSARRNERLKRKKGVTVDEINTTSIKQPKVNNHHNVLGVTVESGKKNTARKLGSLRKSVSAAYSAEVSETPRYMLRSMTKENKKPPLAGSRFDKSV-TVGEKKVGASRRVGKISYY 222
BLAST of Ca_04837 vs. TrEMBL
Match: K7KSJ4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 3.051e-61 Identity = 136/215 (63.26%), Postives = 164/215 (76.28%), Query Frame = 1 Query: 1 MYYSSTMKSHLRPPLPKSPVR-RTRNVLPSSDSVSLQTPPGSLTKSQKPVRSPEIRPEYRTMSCEFKALARMVREEFGKQPDTTEESTIGNSCGVKSGVLFERGRLYDEYSARRNERLKRKKGVMVDREVNTAVKPKVSHRSLGVTVESGKKSAS-RKLGSLRKSVSAAYSTEVSETPRYMLRSMTKENKKPPLASRFDNKLGTVGEKKIGAPRR 639 MY +STMKS +PPLP+SP+R R + + SS+S++LQTPPGSLTKSQKPV SP +RPEYRT+SCE +AL +MVR+EF K +E++ N S VLFERGR YDEYSARRNERL RKKGV E K K H SLGVT+ESGKKS+S RK+G+LRKS+SAAYS+ VSETPRYMLRSMTKENKKPPLA++FD + G+KK+G R Sbjct: 67 MYAASTMKSMYKPPLPRSPIRLRPSHAVHSSNSIALQTPPGSLTKSQKPVISPNMRPEYRTISCELRALTKMVRDEFSKA--NSEKAASAN-----SSVLFERGRFYDEYSARRNERLMRKKGVTAVDE----GKAKPVH-SLGVTMESGKKSSSVRKMGTLRKSISAAYSSGVSETPRYMLRSMTKENKKPPLAAKFDKSV-VAGDKKMGTRAR 268
BLAST of Ca_04837 vs. TrEMBL
Match: C6TBL8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 1.514e-60 Identity = 135/215 (62.79%), Postives = 163/215 (75.81%), Query Frame = 1 Query: 1 MYYSSTMKSHLRPPLPKSPVR-RTRNVLPSSDSVSLQTPPGSLTKSQKPVRSPEIRPEYRTMSCEFKALARMVREEFGKQPDTTEESTIGNSCGVKSGVLFERGRLYDEYSARRNERLKRKKGVMVDREVNTAVKPKVSHRSLGVTVESGKKSAS-RKLGSLRKSVSAAYSTEVSETPRYMLRSMTKENKKPPLASRFDNKLGTVGEKKIGAPRR 639 MY +STMKS +PPLP+SP+R R + + SS+S++LQTPPGSLTKSQKPV SP +RPEYRT+SCE +AL +MVR+EF K +E++ N S VLFERGR YDEYSARRNERL RKKGV E K K H SLGVT+ESGKKS+S RK+G+LRKS+ AAYS+ VSETPRYMLRSMTKENKKPPLA++FD + G+KK+G R Sbjct: 1 MYAASTMKSMYKPPLPRSPIRLRPSHAVHSSNSIALQTPPGSLTKSQKPVISPNMRPEYRTISCELRALTKMVRDEFSKA--NSEKAASAN-----SSVLFERGRFYDEYSARRNERLMRKKGVTAVDE----GKAKPVH-SLGVTMESGKKSSSVRKMGTLRKSIFAAYSSGVSETPRYMLRSMTKENKKPPLAAKFDKSV-VAGDKKMGTRAR 202
BLAST of Ca_04837 vs. TrEMBL
Match: I1JSV6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 2.583e-60 Identity = 135/218 (61.93%), Postives = 158/218 (72.48%), Query Frame = 1 Query: 1 MYYSSTMKSHLRPPLPKSPVR-RTRNVLPSSDSVSLQTPPGSLTKSQKPVRSPEIRPEYRTMSCEFKALARMVREEFGKQPDTTEESTIGNSCGVKSGVLFERGRLYDEYSARRNERLKRKKGVMVDREVNTAVKPKVSHRSLGVTVESGKKSASRKLGSLRKSVSAAYSTEVSETPRYMLRSMTKENKKPPLASRFDNKLGTVGEKKIGAPRRGGRI 651 MY +ST+KS +PPLP+SP+R R + SS+S++LQTPPGSLTKSQKPV SP IRPEYRT+SCE AL +MVR+EF K S VLFERGR YDEYSARRNERL RKKGV E KP RSLGVT+ESGKK++ RK+G+LRKS+SAAYS+ VS TPRYMLRSMTKENKKPPLA++FD + GEKK+G RG RI Sbjct: 1 MYSASTIKSVYKPPLPRSPIRLRPSHAAHSSNSIALQTPPGSLTKSQKPVLSPNIRPEYRTISCELWALTKMVRDEFSK--------VNSEKAATNSSVLFERGRFYDEYSARRNERLMRKKGVTAVDEGKA--KPV---RSLGVTMESGKKTSVRKMGTLRKSISAAYSSGVSGTPRYMLRSMTKENKKPPLAAKFDKSV-VAGEKKMGT--RGRRI 202
BLAST of Ca_04837 vs. TrEMBL
Match: C6SXS5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 1.085e-58 Identity = 133/218 (61.01%), Postives = 157/218 (72.02%), Query Frame = 1 Query: 1 MYYSSTMKSHLRPPLPKSPVR-RTRNVLPSSDSVSLQTPPGSLTKSQKPVRSPEIRPEYRTMSCEFKALARMVREEFGKQPDTTEESTIGNSCGVKSGVLFERGRLYDEYSARRNERLKRKKGVMVDREVNTAVKPKVSHRSLGVTVESGKKSASRKLGSLRKSVSAAYSTEVSETPRYMLRSMTKENKKPPLASRFDNKLGTVGEKKIGAPRRGGRI 651 MY +ST+KS +PPLP+SP+R R + SS+S++LQTPPGSLTKSQKPV S IRPEYRT+SCE AL +MVR+EF K S VLFERGR YDEYSARRNERL RKKGV E KP RSLGVT+ESGKK++ RK+G+LRKS+SAAYS+ VS TPRYMLRSMTKENKKPPLA++FD + GEKK+G RG +I Sbjct: 1 MYSASTIKSVYKPPLPRSPIRLRPSHAAYSSNSIALQTPPGSLTKSQKPVLSLNIRPEYRTISCELWALTKMVRDEFSK--------VNSEKAATNSSVLFERGRFYDEYSARRNERLMRKKGVTAVDEGKA--KPV---RSLGVTMESGKKTSVRKMGTLRKSISAAYSSGVSGTPRYMLRSMTKENKKPPLAAKFDKSV-VAGEKKMGT--RGRKI 202
BLAST of Ca_04837 vs. TrEMBL
Match: E5GBZ2_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 8.618e-48 Identity = 121/221 (54.75%), Postives = 147/221 (66.52%), Query Frame = 1 Query: 13 STMKSHLRPPLPKSPVR-RTRNVLPSSDSVSLQTPPGSLTKSQKPVR-----SPEIRPEYRTMSCEFKALARMVREEFGKQPDTTEESTIGNSCGVKSGVLFERGRLYDEYSARRNERLKRKKGVMVDREVNTAVKPKVSHRSLGVTVESGKKSASRKL-GSLRKSVSAAYSTEVSET-PRYMLRSMTKENKKPPLASRFDNKLGTVGEKKIGAPRRGGRI 651 S M+S RPPL +SP+R R+R V S+ + S+QTPPGSLTKSQK +R E+RPEYRT+SCE +ALA MVR E G +E + +G+ V S LFERGR YDEYSARRNERLK++K EV T +LGVTVES K+ +S+KL SLRKSVSAAYS E SET PRY+LRSM KENKKPPL + + GE+K+ RR RI Sbjct: 2 SKMRSDRRPPLARSPLRLRSRRVPQSNSTTSIQTPPGSLTKSQKMIRPSDLQESELRPEYRTISCELRALASMVRMELGCIE--SEGNGVGDKLSVNSSSLFERGRFYDEYSARRNERLKKRKKAETVAEVKTPY-------NLGVTVESSKRQSSKKLVNSLRKSVSAAYSAERSETAPRYLLRSMMKENKKPPLPVNLEKSMIGGGERKM-VTRRARRI 212
BLAST of Ca_04837 vs. TrEMBL
Match: B9H5H3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_652202 PE=4 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 3.621e-46 Identity = 114/212 (53.77%), Postives = 139/212 (65.57%), Query Frame = 1 Query: 13 STMKSHLRPPLPKSPVR-RTRNVLPSSDSVSLQTPPGSLTKSQKPVRS-----PEIRPEYRTMSCEFKALARMVREEFGKQPDTTEESTIGNSCGVKSGVLFERGRLYDEYSARRNERLKRKKGVMVDREVNTAVKPKVSHRSLGVTVESGKKSASRKLGSLRKSVSAAYSTEVSETPRYMLRSMTKENKKPPLASRFDNKLGTVGEKKIGA 630 S M++ +PPL KSP+R R R VL S+S +LQTPPGSLTKSQKP R ++RPEY ++SCE +ALA+MVR+EFG T +G S S LFERGR Y+EYSARRN+RLKRKKG +T K + +LGVTVES K+ +RKL S RKSVS A E +ETPRY+LRSM KENKKPPL K GE+K+ A Sbjct: 2 SRMRTDRKPPLAKSPIRIRPRRVL-RSESTTLQTPPGSLTKSQKPNRKLDTEDSDLRPEYHSISCELRALAKMVRDEFGNGESTN--GGVGKSLSANSSPLFERGRFYEEYSARRNDRLKRKKG-------DTGDDMKTPY-NLGVTVESSKRRYTRKLESARKSVSDACLVERNETPRYLLRSMNKENKKPPLPVYSFEKSVLAGERKVAA 202
BLAST of Ca_04837 vs. TrEMBL
Match: B9R8M7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1600960 PE=4 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 5.228e-45 Identity = 112/212 (52.83%), Postives = 136/212 (64.15%), Query Frame = 1 Query: 19 MKSHLRPPLPKSPVR-RTRNVLPSSDSVSLQTPPGSLTKSQKPVRSPE-----IRPEYRTMSCEFKALARMVREEFGKQPDTTEESTIGNSCGVKSGVLFERGRLYDEYSARRNERLKRKKGVMVDREVNTAVKPKVSHRSLGVTVESGKKSASRKLGSLRKSVSAAYSTEVSETPRYMLRSMTKENKKPPLASRFDNKLGTVGEKKIGAPR 636 MK +PPL KSP+R R VL S+ + SLQ+PPGSL KSQK P+ +RPEYR++S E +ALARMV++EFGK+ T S S LFERGR YD YSARRNERLKRK G + V T +LGV +ES KK ++KL SLRKSVSAAYS E SE PRY LRS++KENKKPPL ++ + EKK+GA R Sbjct: 1 MKYDRKPPLAKSPIRVRPGRVLRSTTTTSLQSPPGSLIKSQKLNPGPDMEELDLRPEYRSISWELRALARMVQDEFGKENATNAGER--KSLSANSSPLFERGRFYDVYSARRNERLKRKTGETGEEGVKTP-------HNLGVNIESSKKRDTKKLQSLRKSVSAAYSVESSEIPRYSLRSLSKENKKPPLPVNYEKSV-LANEKKVGARR 202
BLAST of Ca_04837 vs. TrEMBL
Match: E0CQR0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00040 PE=4 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 9.229e-42 Identity = 107/212 (50.47%), Postives = 138/212 (65.09%), Query Frame = 1 Query: 13 STMKSHLRPPLPKSPVR-RTRNVLPSSDSVSLQTPPGSLTKS---QKPVRSPEIRPEYRTMSCEFKALARMVREEFGKQPDTTEESTIGNSCGVKSGVLFERGRLYDEYSARRNERLKRKKGVMVDREVNTAVKPKVSHRSLGVTVESGKKSASRKLGSLRKSVSAAYSTEVSETPRYMLRSMTKENKKPPLASRFDNKLGTVGEKKIGAPR 636 S M+S+ +PPL SP++ R+R VL SS + ++QTPPGSLTK+ + + +RPEY T+SCE +ALA++VR E G ++E N+ G S LFERGR YDEYSARRNERLKRKKG T K ++ LGVTVE K+ ++K SLRKSV AA S + SE PRY+LRS TKENKKPP+ + K G++KIGA R Sbjct: 2 SKMRSNGKPPLGNSPIQLRSRRVLRSS-ATTIQTPPGSLTKTLNRTQVIEESGLRPEYLTISCELQALAKIVRNELGN--GSSENVGFPNTFGANSSPLFERGRFYDEYSARRNERLKRKKG-------ETGDVGKTPYK-LGVTVEPSKRRDTKKFESLRKSVPAALSVDRSENPRYLLRSSTKENKKPPMPFNVE-KSAVAGDRKIGARR 201
BLAST of Ca_04837 vs. TrEMBL
Match: B9GQ14_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_830000 PE=4 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 3.507e-41 Identity = 106/211 (50.24%), Postives = 128/211 (60.66%), Query Frame = 1 Query: 13 STMKSHLRPPLPKSPVRRTRNVLPSSDSVSLQTPPGSLTKSQKPVRS-----PEIRPEYRTMSCEFKALARMVREEFGKQPDTTEESTIGNSCGVKSGVLFERGRLYDEYSARRNERLKRKKGVMVDREVNTAVKPKVSHRSLGVTVESGKKSASRKLGSLRKSVSAAYSTEVSETPRYMLRSMTKENKKPPLASRFDNKLGTVGEKKIGA 630 S MK+ +PPL KSP R S+S + QTPPGSL KSQ+P R ++RPEY+++S E +ALA+M R EFG + +G S S LFERGR Y+EYS RRNERLKRKKG EV T +LGVT+ES K+ S+KL SLRKSVSAAY E +E RYMLRSM KENKKPPL K E+K+ A Sbjct: 2 SRMKTVGKPPLAKSPTRLRPRRSIRSESTTSQTPPGSLAKSQRPNRKWDMEESDLRPEYQSISWELRALAKMARGEFGN--GESSNGGVGRSLSANSSPLFERGRFYEEYSVRRNERLKRKKGD-TGNEVKTPC-------NLGVTIESSKRRDSKKLESLRKSVSAAYCVERNENSRYMLRSMNKENKKPPLPVYNYEKSVLASERKVTA 202 The following BLAST results are available for this feature:
BLAST of Ca_04837 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 24
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BLAST of Ca_04837 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_04837_v1.0_kabuli ID=Ca_04837_v1.0_kabuli; Name=Ca_04837; organism=Cicer arietinum; type=mRNA; length=663bpback to top protein sequence of Ca_04837_v1.0_kabuli >Ca_04837_v1.0_kabuli ID=Ca_04837_v1.0_kabuli; Name=Ca_04837_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=220bpback to top mRNA from alignment at Ca5:31357353..31358391- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_04837_v1.0_kabuli ID=Ca_04837_v1.0_kabuli; Name=Ca_04837; organism=Cicer arietinum; type=mRNA; length=1039bp; location=Sequence derived from: Ca5:31357353..31358391- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:31357353..31358391- >Ca_04837_v1.0_kabuli ID=Ca_04837_v1.0_kabuli; Name=Ca_04837; organism=Cicer arietinum; type=CDS; length=663bp; location=Sequence derived from: Ca5:31357353..31358391- (Cicer arietinumback to top |