Ca_04951, Ca_04951_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_04951
Unique NameCa_04951_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length618
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:32475955..32480156 +Cicer arietinum CDC Frontier genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum CDC Frontier genome v1.02013-01-01
InterProScan analysis for kabuli C. arietinum unigenes2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot2019-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR381Pisum sativum Cameor genome v1aPisum sativum
capsR436Pisum sativum Cameor genome v1aPisum sativum
cavuR381Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR444Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR423Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR517Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0699Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0707Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0099Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0339Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0392Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0479Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0531Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0907Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0959Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL041Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL201Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL687Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR385Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR401Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR422Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR403Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR423Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR419Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR438Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR452Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR496Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR355Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR369Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR413Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR186Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL560Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL761Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR377Cicer arietinum
cacarR393Cicer arietinum
cacarR427Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.009G057900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat05G0054100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan09g024300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat5g017120.1Pisum sativum Cameor genome v1aPisum sativum
Va04G069020.4Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_12379Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014644281.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.2g162960.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun09g245800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.2g200520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-KK1_019189Cajanus cajan Asha genome v1.0Cajanus cajan
evm.model.Chr09.1305.1.62113175Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
jg55824.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004500956.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_04951-CDS1Ca_04951-CDS1Cicer arietinumCDS
Ca_04951-CDS2Ca_04951-CDS2Cicer arietinumCDS
Ca_04951-CDS3Ca_04951-CDS3Cicer arietinumCDS
Ca_04951-CDS4Ca_04951-CDS4Cicer arietinumCDS
Ca_04951-CDS5Ca_04951-CDS5Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_04951_v1.0_kabuliCa_04951_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_04951 vs. TrEMBL
Match: I1K7R8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 7.606e-74
Identity = 159/229 (69.43%), Postives = 171/229 (74.67%), Query Frame = 1
Query:    1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPI--FSRRDIXXXXXXXXXXXXXX--IDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612
            MPLP  VS  SS +GT LST+TA+SS PPKRNVS SP P    SRRDI                IDIGISGPKDWLKEQKKK+SK+LLAPVDASR+ LRSAYL LTETDAAYTDEDL K QQLF SAARDCVPQDRNSFV  QANTGVEVCTFRL+VKNAASLLG KDPVKL+AEALLDNLI                    R+KIA+AVSDTI+ LDKFEQGI+DCLE
Sbjct:    1 MPLPTVVSPFSSSSGTFLSTVTARSSLPPKRNVSPSPSPFSTLSRRDIALLSFFSLSLSAPSSAIDIGISGPKDWLKEQKKKASKYLLAPVDASRQILRSAYLTLTETDAAYTDEDLEKMQQLFISAARDCVPQDRNSFVTLQANTGVEVCTFRLIVKNAASLLGNKDPVKLKAEALLDNLIRSFTSVSGLASETNIQLASDRKKIADAVSDTISDLDKFEQGIRDCLE 229          
BLAST of Ca_04951 vs. TrEMBL
Match: C6TLM7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 3.775e-73
Identity = 158/229 (69.00%), Postives = 170/229 (74.24%), Query Frame = 1
Query:    1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPI--FSRRDIXXXXXXXXXXXXXX--IDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612
            MPLP  VS  SS +GT LST+TA+SS PPKRNVS SP P    SRRDI                IDIGISGPKDWLKEQKKK+SK+LLAPVDASR+ LRSAYL LTETDAAYTDEDL K QQLF SAARDCVPQDRNSFV  QANTGVEVCTFRL+VKNAASLLG KDPV L+AEALLDNLI                    R+KIA+AVSDTI+ LDKFEQGI+DCLE
Sbjct:    1 MPLPTVVSPFSSSSGTFLSTVTARSSLPPKRNVSPSPSPFSTLSRRDIALLSFFSLSLSAPSSAIDIGISGPKDWLKEQKKKASKYLLAPVDASRQILRSAYLTLTETDAAYTDEDLEKMQQLFISAARDCVPQDRNSFVTLQANTGVEVCTFRLIVKNAASLLGNKDPVMLKAEALLDNLIRSFTSVSGLASETNIQLASDRKKIADAVSDTISDLDKFEQGIRDCLE 229          
BLAST of Ca_04951 vs. TrEMBL
Match: I1JTB2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.484e-69
Identity = 149/227 (65.64%), Postives = 166/227 (73.13%), Query Frame = 1
Query:    1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPIFSRRDIXXXXXXXXXXXXXX--IDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612
            MPL   VS   S + T LST+ A+SS PPKRNVS SPF   SRR I                I+IG+SGPK+WLK+QKKK+SK+LLAP+DASR+ LRSAYL LTETDAAYTDEDL K QQLF SAARDCVPQDRNSFV FQANTGVEVCTFRL+VKNAASLLG KDPVKL+AEALLDNLI                    R+KIA+AVSDTI+ LDKFE GI+DCLE
Sbjct:    1 MPLSTVVSPFCSSSATFLSTVIARSSLPPKRNVSPSPFSTLSRRGIALLSFLSLSLSAPASAIEIGMSGPKNWLKDQKKKASKYLLAPIDASRQILRSAYLTLTETDAAYTDEDLEKIQQLFISAARDCVPQDRNSFVTFQANTGVEVCTFRLIVKNAASLLGNKDPVKLKAEALLDNLIRSFTSVSGMASKTNIQLASDRKKIADAVSDTISDLDKFELGIRDCLE 227          
BLAST of Ca_04951 vs. TrEMBL
Match: C6T537_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 4.319e-69
Identity = 148/227 (65.20%), Postives = 166/227 (73.13%), Query Frame = 1
Query:    1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPIFSRRDIXXXXXXXXXXXXXX--IDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612
            MPL   VS   S + T LST+ A+SS PPKRNVS SPF   SRR I                I+IG+SGPK+WLK+QKKK+SK+LLAP+DASR+ LRSAYL LTETDAAYTDEDL K +QLF SAARDCVPQDRNSFV FQANTGVEVCTFRL+VKNAASLLG KDPVKL+AEALLDNLI                    R+KIA+AVSDTI+ LDKFE GI+DCLE
Sbjct:    1 MPLSTVVSPFCSSSATFLSTVIARSSLPPKRNVSPSPFSTLSRRGIALLSFLSLSLSAPASAIEIGMSGPKNWLKDQKKKASKYLLAPIDASRQILRSAYLTLTETDAAYTDEDLEKIRQLFISAARDCVPQDRNSFVTFQANTGVEVCTFRLIVKNAASLLGNKDPVKLKAEALLDNLIRSFTSVSGMASKTNIQLASDRKKIADAVSDTISDLDKFELGIRDCLE 227          
BLAST of Ca_04951 vs. TrEMBL
Match: I1JTB1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 5.640e-69
Identity = 147/225 (65.33%), Postives = 163/225 (72.44%), Query Frame = 1
Query:    1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPIFSRRDIXXXXXXXXXXXXXXIDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612
            MPL   VS   S + T LST+ A+SS PPKRNVS SPF   SRR I                I I+GPK+WLK+QKKK+SK+LLAP+DASR+ LRSAYL LTETDAAYTDEDL K QQLF SAARDCVPQDRNSFV FQANTGVEVCTFRL+VKNAASLLG KDPVKL+AEALLDNLI                    R+KIA+AVSDTI+ LDKFE GI+DCLE
Sbjct:    1 MPLSTVVSPFCSSSATFLSTVIARSSLPPKRNVSPSPFSTLSRRGIALLSFLSLSLSAPASAIEIAGPKNWLKDQKKKASKYLLAPIDASRQILRSAYLTLTETDAAYTDEDLEKIQQLFISAARDCVPQDRNSFVTFQANTGVEVCTFRLIVKNAASLLGNKDPVKLKAEALLDNLIRSFTSVSGMASKTNIQLASDRKKIADAVSDTISDLDKFELGIRDCLE 225          
BLAST of Ca_04951 vs. TrEMBL
Match: C6SX97_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 1.814e-67
Identity = 147/225 (65.33%), Postives = 162/225 (72.00%), Query Frame = 1
Query:    1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPIFSRRDIXXXXXXXXXXXXXXIDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612
            MPL   VS   S + T LST+ A+SS PPKRNVS SPF   SRR I                I I GPK+WLK+QKKK+SK+LLAP+DASR+ LRSAYL LTETDAAYTDEDL K QQLF SAARDCVPQDRNSFV FQANTGVEVCTFRL+VKNAASLLG KDPVKL+AEALLDNLI                    R+KIA+AVSDTI+ LDKFE GI+DCLE
Sbjct:    1 MPLSTVVSPFCSSSATFLSTVIARSSLPPKRNVSPSPFSTLSRRGIALLSFLSLSLSAPASAIEI-GPKNWLKDQKKKASKYLLAPIDASRQILRSAYLTLTETDAAYTDEDLEKIQQLFISAARDCVPQDRNSFVTFQANTGVEVCTFRLIVKNAASLLGNKDPVKLKAEALLDNLIRSFTSVSGMASKTNIQLASDRKKIADAVSDTISDLDKFELGIRDCLE 224          
BLAST of Ca_04951 vs. TrEMBL
Match: I1JTB0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 5.292e-59
Identity = 127/179 (70.95%), Postives = 138/179 (77.09%), Query Frame = 1
Query:    1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPIFSRRDIXXXXXXXXXXXXXXIDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLIR 534
            MPL   VS   S + T LST+ A+SS PPKRNVS SPF   SRR I                I I GPK+WLK+QKKK+SK+LLAP+DASR+ LRSAYL LTETDAAYTDEDL K QQLF SAARDCVPQDRNSFV FQANTGVEVCTFRL+VKNAASLLG KDPVKL+AEALLDNLIR
Sbjct:    1 MPLSTVVSPFCSSSATFLSTVIARSSLPPKRNVSPSPFSTLSRRGIALLSFLSLSLSAPASAIEI-GPKNWLKDQKKKASKYLLAPIDASRQILRSAYLTLTETDAAYTDEDLEKIQQLFISAARDCVPQDRNSFVTFQANTGVEVCTFRLIVKNAASLLGNKDPVKLKAEALLDNLIR 178          
BLAST of Ca_04951 vs. TrEMBL
Match: M5XGH7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010740mg PE=4 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 3.005e-54
Identity = 123/223 (55.16%), Postives = 153/223 (68.61%), Query Frame = 1
Query:   52 STITAQSSFPPKRN--VSHSPFP--------IFSRRDIXXXXXXXXXXXXXXID------IGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612
            ST+TA SSFPPK    +S+  F         + SRRD+               D       GISGPKDWL+EQKKK+S+FLLAP+DASRE+L +A+  LT TD+  T+E++ + Q+LF+SAARDCVP DRNSFVAFQANTGVEVCTFRL+VKNAASLLG KDPVKLEAE++L++LI                    R+K+A+++ DTI+SLDKFEQGIKDCLE
Sbjct:   15 STVTAISSFPPKPKPPISNHNFSSNHEISNFLRSRRDVALLSFIALIPSLSRPDPAFGLSFGISGPKDWLREQKKKASRFLLAPIDASRESLLTAHRILTATDSNSTNEEIEEVQRLFKSAARDCVPDDRNSFVAFQANTGVEVCTFRLVVKNAASLLGDKDPVKLEAESMLNDLIRSFTSLNVLVNETDVQFASERKKVADSLMDTISSLDKFEQGIKDCLE 237          
BLAST of Ca_04951 vs. TrEMBL
Match: B9R7U3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1594350 PE=4 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.948e-53
Identity = 126/235 (53.62%), Postives = 151/235 (64.26%), Query Frame = 1
Query:   52 STITAQSSFPPKRNVS----------HSPFPI-FSRRD------IXXXXXXXXXXXXXXIDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETD----------AAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLEI 615
            ST  +   FPPK ++S          H P PI  SRRD      +                IGISGPKDWLKEQKKKSSKFLLAP+DASRE LRSAYL L+E D          + Y++++L + Q L RSAARDCVPQDRNSFVAFQANTGVEVCTFRL+VKNAASLL KKDPVKLEAE +L++LI                    R++IA+A+  T++SL+KFEQG+KDCLE+
Sbjct:    9 STSISPPPFPPKPSISNHNLLSKCHHHLPSPIEISRRDAALLSVLALVSSLSQPAPATAFSIGISGPKDWLKEQKKKSSKFLLAPIDASREILRSAYLLLSERDLFSLLIAASESGYSNKELQEVQTLLRSAARDCVPQDRNSFVAFQANTGVEVCTFRLIVKNAASLLDKKDPVKLEAEVMLNDLIRSFTSLTGLANEANILIASDRKEIADALMKTLSSLNKFEQGVKDCLEV 243          
BLAST of Ca_04951 vs. TrEMBL
Match: B9IBG3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_824462 PE=4 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 4.797e-52
Identity = 105/163 (64.42%), Postives = 129/163 (79.14%), Query Frame = 1
Query:  184 IGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612
            +GISGPKDWLK+QKKK++K++LAP+DASRE LRSAYL LT++   + +E L + Q+L +SAARDCVPQDRNSFVAFQANTGVEVCTFRL+VKNAASLL K DP KLEAEA+LD+LI                    R+K+A+A+ +TI+SLDKFEQG+KDCLE
Sbjct:   58 VGISGPKDWLKDQKKKTAKYILAPIDASREILRSAYLLLTDSQPEFKEEKLEEVQRLLKSAARDCVPQDRNSFVAFQANTGVEVCTFRLIVKNAASLLDKNDPAKLEAEAILDDLIRSFTSLDGLANEANVQLASDRQKVADALMNTISSLDKFEQGVKDCLE 220          
The following BLAST results are available for this feature:
BLAST of Ca_04951 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
I1K7R8_SOYBN7.606e-7469.43Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6TLM7_SOYBN3.775e-7369.00Putative uncharacterized protein OS=Glycine max PE... [more]
I1JTB2_SOYBN1.484e-6965.64Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6T537_SOYBN4.319e-6965.20Putative uncharacterized protein OS=Glycine max PE... [more]
I1JTB1_SOYBN5.640e-6965.33Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6SX97_SOYBN1.814e-6765.33Uncharacterized protein OS=Glycine max PE=2 SV=1[more]
I1JTB0_SOYBN5.292e-5970.95Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
M5XGH7_PRUPE3.005e-5455.16Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9R7U3_RICCO1.948e-5353.62Putative uncharacterized protein OS=Ricinus commun... [more]
B9IBG3_POPTR4.797e-5264.42Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]

Pages

back to top
BLAST of Ca_04951 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 46..59
score
NoneNo IPR availableCOILcoilcoiled-coilcoord: 37..58
score
NoneNo IPR availableSEGsegsegcoord: 38..51
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_04951_v1.0_kabuli ID=Ca_04951_v1.0_kabuli; Name=Ca_04951; organism=Cicer arietinum; type=mRNA; length=618bp
ATGCCGTTACCAGCAACCGTTTCTGCTCTCAGCTCTTTCACAGGGACCTT
ATCCACCATAACCGCGCAATCTTCATTCCCTCCAAAACGCAACGTTTCAC
ATTCCCCTTTTCCGATTTTCTCTCGCAGAGACATAGCATTCCTTTCCTTC
CTCTCTCTCTCTGCACCTGCCTCCGCCATTGACATTGGCATTTCAGGACC
AAAGGATTGGTTAAAAGAGCAAAAGAAGAAATCCTCAAAGTTCTTATTAG
CACCCGTCGATGCCTCTCGCGAAACACTTCGTTCTGCTTATCTTTTCCTC
ACGGAAACCGACGCTGCTTATACCGATGAGGATTTACCGAAATTTCAGCA
GCTATTCAGATCTGCTGCTAGGGATTGCGTTCCACAGGATAGGAATTCTT
TCGTCGCTTTCCAAGCTAACACCGGAGTAGAGGTGTGCACGTTTCGGTTG
CTTGTGAAGAACGCAGCCTCCTTGCTTGGAAAAAAGGATCCTGTAAAGTT
AGAAGCTGAAGCTTTGTTAGATAATCTTATAAGGAGAAAGATAGCAAATG
CTGTATCGGATACAATAACAAGCCTTGACAAATTTGAGCAAGGAATTAAG
GATTGCCTAGAAATCTGA
back to top

protein sequence of Ca_04951_v1.0_kabuli

>Ca_04951_v1.0_kabuli ID=Ca_04951_v1.0_kabuli; Name=Ca_04951_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=205bp
MPLPATVSALSSFTGTLSTITAQSSFPPKRNVSHSPFPIFSRRDIAFLSF
LSLSAPASAIDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFL
TETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRL
LVKNAASLLGKKDPVKLEAEALLDNLIRRKIANAVSDTITSLDKFEQGIK
DCLEI
back to top

mRNA from alignment at Ca5:32475955..32480156+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_04951_v1.0_kabuli ID=Ca_04951_v1.0_kabuli; Name=Ca_04951; organism=Cicer arietinum; type=mRNA; length=4202bp; location=Sequence derived from: Ca5:32475955..32480156+ (Cicer arietinum
ATGCCGTTACCAGCAACCGTTTCTGCTCTCAGCTCTTTCACAGGGACCTT ATCCACCATAACCGCGCAATCTTCATTCCCTCCAAAACGCAACGTTTCAC ATTCCCCTTTTCCGATTTTCTCTCGCAGAGACATAGCATTCCTTTCCTTC CTCTCTCTCTCTGCACCTGCCTCCGCCATTGACATTGGCATTTGTAAGCA CCAATGCTCTTCAATCATTTTCTTGTTCTTCCTGTATTTAGAATCAATAA ACCCTAACGTTTGAAACCGTTTCGCAGCAGGACCAAAGGATTGGTTAAAA GAGCAAAAGAAGAAATCCTCAAAGTTCTTATTAGCACCCGTCGATGCCTC TCGCGAAACACTTCGTTCTGCTTATCTTTTCCTCAGTACGATTTTTTCTT TCCTTTTCTCTATGCATTGACACACACATTGTTTCTTATCTTATTAGGGT TTGCTTCTGTTATTTTTCATAGCGGAAACCGACGCTGCTTATACCGATGA GGATTTACCGAAATTTCAGCAGCTATTCAGATCTGCTGCTAGGGATTGCG TTCCACAGGATAGGAATTCTTTCGTCGCTTTCCAAGCTAACACCGGAGTA GAGGTTCCTCTTCGCCATTTACTGCAATACATACAAATTTGAATGCCTCG AAAATTAGGATTCGGATGACACATTAGGAAAATTGGTAGAAAACGACGCC GGTTTTGTGTATTAATTATCAAAGGGCTTGCAAGTTCAAAATACTCACGA GTCATTCATTAAATTGATTATTGTTATTACACTTTAAATGGAAGGTGTCG TTTGAAAGGTCACTGATACATGTGTTATATTCAATTACTTAAGTGTTGTG TCTGATGTTAAGAGTCTCGTATTGGATGAAATAAGTGGTGGTTAATTGCC ATCCTCCAAGTCAGTTTTGTGGGGTTGTGTAAGACTCGACCCAAATTATA AGATCTAATGTTTGTGTCTGTGTTTCGTAAGTTATAATCACAGGACATTT TTTTTAACATCATTGTTATCTTTTAGACTTAGTGGATGCTTTATTCCCTT TTTCTCAAAAAGAATGTCAGTTCAAGTGAAAATATTTTTCCACAAAATAA TTTTTTCACCTTCAATATCTTTTTATATGCACAGGTGTGCACGTTTCGGT TGCTTGTGAAGAACGCAGCCTCCTTGCTTGGAAAAAAGGATCCTGTAAAG TTAGAAGCTGAAGCTTTGTTAGATAATCTTATAAGGTATCCACTTTCCAA CATCTATGTGTTATACATCAATTAGTGTCCATCAAATCCTTTTTTTACAC CAAATATTTCATTTTTTAGTCCCTGTGGTTCAAGTATCCACGCTATTTGA GAATACTGTGAAGCAAACGATTGGATTGGATAAGTTAATTTTACTTTATA ACTAAAGAAAGTGGATTATCCCAATCGAATTGTTTTTGGTTCCATTGTTC TATATTATTGTATTTTTAGTCAAGTCTCCGTATCTATGATGCTCTATTGC CACTTCTTTGTTTTGAAGCAATCAATTTGAAGTGCAATATATATTTGGCA TATTTAGTTTCCAGCATCTAATTCTTCACGTGGACTGAATCTTATGTCTG GCATATTAACATTTGTTTCTTTTTATGTATGAAACTCTTAATGACTACCT ACTCTCTACCTAACTTCATTCTTTTTACTCCCTCCGTCTCACAATGGGTG CTACTTTAATAAGAAAGTTCTCTTAAAATGAGTGTTATTCTCAATTTTCA ATGTAACTTTAATTATTTTTTTCTAATTGTACTCTTCAATTATTAATACT ACACTACATCCAAAGTATTAATTCTATTTTGCATTTATGATAGTGAGAAA TACTCAAATACACCAATAGATAGGAAGAATAATTTCGTAAAATATTCTTT CTTTTACTTAGTCATTTTTTAATATGCGTCACATGAGCAAAAGTGACATT CATTGTGAGACAAAGAGAGTACCAATCTAACATATTAACCTTTGTTTCTT TCTAAGTCAGAAACTCTTATTGACTACTTATTCTCTTCTTAACTTCATTC TTTTTACCAATTAAGATGCAGGACAAAGGTAGGTAGGCATGTAGGTCATA CATAGTTATATTTTGGTTTTGATGACTGCGTTAGTTTTGACAGCAATTGG TATTTGAAATATTATTTAGTAATTTTTTATAAACTTTTGGTAATTCTGGT ACAGTTATGTTCATATGAGCATAATATATGGATTACGAAAGTTCTAGAAG ATTGTTTACTTGACAGACCTAGTTTCAGCAAGCCTATGAAAGGGTTTGCT TTGTGTAAATGAAGATTAAGTTCTTGTTTTAAGTTATGAATATTATTCAA GGGTTTTCCCCTGTTGTGGTAGCTAATAAATATATAATAAAGCCATTGAT GAGCATTTACCCATTGTCTTAAGCTTTGACGAGAGTAAATTCTGTGTTCA ATCCTTGTTTAATTTAAATAAAATTGATTAGAATTTAGAGCACATGGTAA CAGTGGACCTTTCCATTGTGTATGCTTCAAGTTCAAGTGTCTCTATCCAA TATCCATGATACGAGCCTCAGCTAGCTCGTTAAGGTTCTAGGAGAGTATA ATAACTTAAAATTAAAACTATAACAGCAGATAAAAACAAATATATAAACA CAAGAAATCAAGAAAGTTACTATTACTTATTATAATATCATGAAAGATTT CCAATATTGGGATCACCGCAATGATATTTAATGAGTCTGGATTAATTATC CTTAAGATTGATTCTCTTTTGAAGGTGAATTATCTTATTATAGGTAATGC TTCCTCTCTAGATACAAAAACCGTGACAAATTAAGGGTGTGTTTGTTTCG GAGTTGCAAAATATATTTCTTAAAGCATCTCCAACGGTGTACTCAACATG GGTTCATTAAATAGGGTCTACTGTGCCACATCATCTTGAAGCAACTCATT CATTTTTTACCTGAGAGAACTGTGATGACAGTTTGTCACAACTCCAACCG TGAAATCGCCAAAAACTGAATTTTACGTAACTACACGTTGGCGGACGAAA TTATTTAGTTACCGTTGGAGATGCTCTTAGAATAAGAGGTTGGAAATAAA TGTATGCATGTTTGTTATAATGGAATAAATAATTATTCCTATTATACCTG GGAGTTTTTTTTCCCATGAAGGTAGGAATTCTATCCCCAAGCTATTATGG TGCGAAAGTTATTCCCATGAAGACTGGAATAATTTGTGTGTGTAAAATAC TATGTAACCTCCACTAACCCCACTAGCTCCATAAAATAACTTCCAAACTT CCACTCCAAGTGCACAAATGTTTTTTTATCATAACATTTATTTATTAATT AGTAATTTAAAAAAAAATTATTCCCAGGAATTTAAATTATTATCCAAATA GTTTTATTAAACTTTCCATGGAAAAAGATTTCCATGAGAACAAATACTGA TAGTTTTTCCAAGGAATGTTGATCCTGGGAACAAATTTTGTAACCATGAA ACAGACACACCCTAAATCAATTTCTAGTCTCATGCTAATAGTATTTAAAT TGAACTCTTTAAGTTTTGTCATAATTCATGGCTTCTCAAAAGATGAGAGT TAGACCTTGGCACTCGACAGAGTTTCTATTCTATCCTGTAGATTAAACGT TGTCTGCTACCTTTTTTTGTTTACTTCCCTCTAAATTTCTTATGTGCCAA GTGCTAACTTCGTGTATTATGATACCCAAAGCATTATCTTTTGCCTTTTT TTTTTAATATCCTTTGATGTCAAAATGCATAACAATTACCAAATTTCATG ATATAAGATGGTGCCTGTTTCCCATATTTCTTCTTATCTGCAGATCTTTC ACCTCTATCAGTGGGATGGCAAATGAAACCAACATTGGACTTGCATCAGA TAGGTATCTCTTCAATAATAGTATCCAGGATAACGGCGGTATACTATATA ATAGTTTAAAAGAATCTTCTTTATGCTATCATTGGAAAAAAAATTGGACC TGTATTGTCGCCCTTTTTGTGTGAATCAACTTACCTTTATGTTTATTATT CCGGCACCTCTAACTGAGATTATCAAATAAACGACTTGCATCTGAAATCA ATCTTTTTTTCCTTCAGGAGAAAGATAGCAAATGCTGTATCGGATACAAT AACAAGCCTTGACAAATTTGAGCAAGGAATTAAGGATTGCCTAGAAATCT GA
back to top

Coding sequence (CDS) from alignment at Ca5:32475955..32480156+

>Ca_04951_v1.0_kabuli ID=Ca_04951_v1.0_kabuli; Name=Ca_04951; organism=Cicer arietinum; type=CDS; length=618bp; location=Sequence derived from: Ca5:32475955..32480156+ (Cicer arietinum
ATGCCGTTACCAGCAACCGTTTCTGCTCTCAGCTCTTTCACAGGGACCTT
ATCCACCATAACCGCGCAATCTTCATTCCCTCCAAAACGCAACGTTTCAC
ATTCCCCTTTTCCGATTTTCTCTCGCAGAGACATAGCATTCCTTTCCTTC
CTCTCTCTCTCTGCACCTGCCTCCGCCATTGACATTGGCATTTCAGGACC
AAAGGATTGGTTAAAAGAGCAAAAGAAGAAATCCTCAAAGTTCTTATTAG
CACCCGTCGATGCCTCTCGCGAAACACTTCGTTCTGCTTATCTTTTCCTC
ACGGAAACCGACGCTGCTTATACCGATGAGGATTTACCGAAATTTCAGCA
GCTATTCAGATCTGCTGCTAGGGATTGCGTTCCACAGGATAGGAATTCTT
TCGTCGCTTTCCAAGCTAACACCGGAGTAGAGGTGTGCACGTTTCGGTTG
CTTGTGAAGAACGCAGCCTCCTTGCTTGGAAAAAAGGATCCTGTAAAGTT
AGAAGCTGAAGCTTTGTTAGATAATCTTATAAGGAGAAAGATAGCAAATG
CTGTATCGGATACAATAACAAGCCTTGACAAATTTGAGCAAGGAATTAAG
GATTGCCTAGAAATCTGA
back to top