Ca_04951, Ca_04951_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_04951 vs. TrEMBL
Match: I1K7R8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 7.606e-74 Identity = 159/229 (69.43%), Postives = 171/229 (74.67%), Query Frame = 1 Query: 1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPI--FSRRDIXXXXXXXXXXXXXX--IDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612 MPLP VS SS +GT LST+TA+SS PPKRNVS SP P SRRDI IDIGISGPKDWLKEQKKK+SK+LLAPVDASR+ LRSAYL LTETDAAYTDEDL K QQLF SAARDCVPQDRNSFV QANTGVEVCTFRL+VKNAASLLG KDPVKL+AEALLDNLI R+KIA+AVSDTI+ LDKFEQGI+DCLE Sbjct: 1 MPLPTVVSPFSSSSGTFLSTVTARSSLPPKRNVSPSPSPFSTLSRRDIALLSFFSLSLSAPSSAIDIGISGPKDWLKEQKKKASKYLLAPVDASRQILRSAYLTLTETDAAYTDEDLEKMQQLFISAARDCVPQDRNSFVTLQANTGVEVCTFRLIVKNAASLLGNKDPVKLKAEALLDNLIRSFTSVSGLASETNIQLASDRKKIADAVSDTISDLDKFEQGIRDCLE 229
BLAST of Ca_04951 vs. TrEMBL
Match: C6TLM7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 3.775e-73 Identity = 158/229 (69.00%), Postives = 170/229 (74.24%), Query Frame = 1 Query: 1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPI--FSRRDIXXXXXXXXXXXXXX--IDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612 MPLP VS SS +GT LST+TA+SS PPKRNVS SP P SRRDI IDIGISGPKDWLKEQKKK+SK+LLAPVDASR+ LRSAYL LTETDAAYTDEDL K QQLF SAARDCVPQDRNSFV QANTGVEVCTFRL+VKNAASLLG KDPV L+AEALLDNLI R+KIA+AVSDTI+ LDKFEQGI+DCLE Sbjct: 1 MPLPTVVSPFSSSSGTFLSTVTARSSLPPKRNVSPSPSPFSTLSRRDIALLSFFSLSLSAPSSAIDIGISGPKDWLKEQKKKASKYLLAPVDASRQILRSAYLTLTETDAAYTDEDLEKMQQLFISAARDCVPQDRNSFVTLQANTGVEVCTFRLIVKNAASLLGNKDPVMLKAEALLDNLIRSFTSVSGLASETNIQLASDRKKIADAVSDTISDLDKFEQGIRDCLE 229
BLAST of Ca_04951 vs. TrEMBL
Match: I1JTB2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.484e-69 Identity = 149/227 (65.64%), Postives = 166/227 (73.13%), Query Frame = 1 Query: 1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPIFSRRDIXXXXXXXXXXXXXX--IDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612 MPL VS S + T LST+ A+SS PPKRNVS SPF SRR I I+IG+SGPK+WLK+QKKK+SK+LLAP+DASR+ LRSAYL LTETDAAYTDEDL K QQLF SAARDCVPQDRNSFV FQANTGVEVCTFRL+VKNAASLLG KDPVKL+AEALLDNLI R+KIA+AVSDTI+ LDKFE GI+DCLE Sbjct: 1 MPLSTVVSPFCSSSATFLSTVIARSSLPPKRNVSPSPFSTLSRRGIALLSFLSLSLSAPASAIEIGMSGPKNWLKDQKKKASKYLLAPIDASRQILRSAYLTLTETDAAYTDEDLEKIQQLFISAARDCVPQDRNSFVTFQANTGVEVCTFRLIVKNAASLLGNKDPVKLKAEALLDNLIRSFTSVSGMASKTNIQLASDRKKIADAVSDTISDLDKFELGIRDCLE 227
BLAST of Ca_04951 vs. TrEMBL
Match: C6T537_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 4.319e-69 Identity = 148/227 (65.20%), Postives = 166/227 (73.13%), Query Frame = 1 Query: 1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPIFSRRDIXXXXXXXXXXXXXX--IDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612 MPL VS S + T LST+ A+SS PPKRNVS SPF SRR I I+IG+SGPK+WLK+QKKK+SK+LLAP+DASR+ LRSAYL LTETDAAYTDEDL K +QLF SAARDCVPQDRNSFV FQANTGVEVCTFRL+VKNAASLLG KDPVKL+AEALLDNLI R+KIA+AVSDTI+ LDKFE GI+DCLE Sbjct: 1 MPLSTVVSPFCSSSATFLSTVIARSSLPPKRNVSPSPFSTLSRRGIALLSFLSLSLSAPASAIEIGMSGPKNWLKDQKKKASKYLLAPIDASRQILRSAYLTLTETDAAYTDEDLEKIRQLFISAARDCVPQDRNSFVTFQANTGVEVCTFRLIVKNAASLLGNKDPVKLKAEALLDNLIRSFTSVSGMASKTNIQLASDRKKIADAVSDTISDLDKFELGIRDCLE 227
BLAST of Ca_04951 vs. TrEMBL
Match: I1JTB1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 5.640e-69 Identity = 147/225 (65.33%), Postives = 163/225 (72.44%), Query Frame = 1 Query: 1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPIFSRRDIXXXXXXXXXXXXXXIDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612 MPL VS S + T LST+ A+SS PPKRNVS SPF SRR I I I+GPK+WLK+QKKK+SK+LLAP+DASR+ LRSAYL LTETDAAYTDEDL K QQLF SAARDCVPQDRNSFV FQANTGVEVCTFRL+VKNAASLLG KDPVKL+AEALLDNLI R+KIA+AVSDTI+ LDKFE GI+DCLE Sbjct: 1 MPLSTVVSPFCSSSATFLSTVIARSSLPPKRNVSPSPFSTLSRRGIALLSFLSLSLSAPASAIEIAGPKNWLKDQKKKASKYLLAPIDASRQILRSAYLTLTETDAAYTDEDLEKIQQLFISAARDCVPQDRNSFVTFQANTGVEVCTFRLIVKNAASLLGNKDPVKLKAEALLDNLIRSFTSVSGMASKTNIQLASDRKKIADAVSDTISDLDKFELGIRDCLE 225
BLAST of Ca_04951 vs. TrEMBL
Match: C6SX97_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 1.814e-67 Identity = 147/225 (65.33%), Postives = 162/225 (72.00%), Query Frame = 1 Query: 1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPIFSRRDIXXXXXXXXXXXXXXIDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612 MPL VS S + T LST+ A+SS PPKRNVS SPF SRR I I I GPK+WLK+QKKK+SK+LLAP+DASR+ LRSAYL LTETDAAYTDEDL K QQLF SAARDCVPQDRNSFV FQANTGVEVCTFRL+VKNAASLLG KDPVKL+AEALLDNLI R+KIA+AVSDTI+ LDKFE GI+DCLE Sbjct: 1 MPLSTVVSPFCSSSATFLSTVIARSSLPPKRNVSPSPFSTLSRRGIALLSFLSLSLSAPASAIEI-GPKNWLKDQKKKASKYLLAPIDASRQILRSAYLTLTETDAAYTDEDLEKIQQLFISAARDCVPQDRNSFVTFQANTGVEVCTFRLIVKNAASLLGNKDPVKLKAEALLDNLIRSFTSVSGMASKTNIQLASDRKKIADAVSDTISDLDKFELGIRDCLE 224
BLAST of Ca_04951 vs. TrEMBL
Match: I1JTB0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 5.292e-59 Identity = 127/179 (70.95%), Postives = 138/179 (77.09%), Query Frame = 1 Query: 1 MPLPATVSALSSFTGT-LSTITAQSSFPPKRNVSHSPFPIFSRRDIXXXXXXXXXXXXXXIDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLIR 534 MPL VS S + T LST+ A+SS PPKRNVS SPF SRR I I I GPK+WLK+QKKK+SK+LLAP+DASR+ LRSAYL LTETDAAYTDEDL K QQLF SAARDCVPQDRNSFV FQANTGVEVCTFRL+VKNAASLLG KDPVKL+AEALLDNLIR Sbjct: 1 MPLSTVVSPFCSSSATFLSTVIARSSLPPKRNVSPSPFSTLSRRGIALLSFLSLSLSAPASAIEI-GPKNWLKDQKKKASKYLLAPIDASRQILRSAYLTLTETDAAYTDEDLEKIQQLFISAARDCVPQDRNSFVTFQANTGVEVCTFRLIVKNAASLLGNKDPVKLKAEALLDNLIR 178
BLAST of Ca_04951 vs. TrEMBL
Match: M5XGH7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010740mg PE=4 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 3.005e-54 Identity = 123/223 (55.16%), Postives = 153/223 (68.61%), Query Frame = 1 Query: 52 STITAQSSFPPKRN--VSHSPFP--------IFSRRDIXXXXXXXXXXXXXXID------IGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612 ST+TA SSFPPK +S+ F + SRRD+ D GISGPKDWL+EQKKK+S+FLLAP+DASRE+L +A+ LT TD+ T+E++ + Q+LF+SAARDCVP DRNSFVAFQANTGVEVCTFRL+VKNAASLLG KDPVKLEAE++L++LI R+K+A+++ DTI+SLDKFEQGIKDCLE Sbjct: 15 STVTAISSFPPKPKPPISNHNFSSNHEISNFLRSRRDVALLSFIALIPSLSRPDPAFGLSFGISGPKDWLREQKKKASRFLLAPIDASRESLLTAHRILTATDSNSTNEEIEEVQRLFKSAARDCVPDDRNSFVAFQANTGVEVCTFRLVVKNAASLLGDKDPVKLEAESMLNDLIRSFTSLNVLVNETDVQFASERKKVADSLMDTISSLDKFEQGIKDCLE 237
BLAST of Ca_04951 vs. TrEMBL
Match: B9R7U3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1594350 PE=4 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 1.948e-53 Identity = 126/235 (53.62%), Postives = 151/235 (64.26%), Query Frame = 1 Query: 52 STITAQSSFPPKRNVS----------HSPFPI-FSRRD------IXXXXXXXXXXXXXXIDIGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETD----------AAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLEI 615 ST + FPPK ++S H P PI SRRD + IGISGPKDWLKEQKKKSSKFLLAP+DASRE LRSAYL L+E D + Y++++L + Q L RSAARDCVPQDRNSFVAFQANTGVEVCTFRL+VKNAASLL KKDPVKLEAE +L++LI R++IA+A+ T++SL+KFEQG+KDCLE+ Sbjct: 9 STSISPPPFPPKPSISNHNLLSKCHHHLPSPIEISRRDAALLSVLALVSSLSQPAPATAFSIGISGPKDWLKEQKKKSSKFLLAPIDASREILRSAYLLLSERDLFSLLIAASESGYSNKELQEVQTLLRSAARDCVPQDRNSFVAFQANTGVEVCTFRLIVKNAASLLDKKDPVKLEAEVMLNDLIRSFTSLTGLANEANILIASDRKEIADALMKTLSSLNKFEQGVKDCLEV 243
BLAST of Ca_04951 vs. TrEMBL
Match: B9IBG3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_824462 PE=4 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 4.797e-52 Identity = 105/163 (64.42%), Postives = 129/163 (79.14%), Query Frame = 1 Query: 184 IGISGPKDWLKEQKKKSSKFLLAPVDASRETLRSAYLFLTETDAAYTDEDLPKFQQLFRSAARDCVPQDRNSFVAFQANTGVEVCTFRLLVKNAASLLGKKDPVKLEAEALLDNLI--------------------RRKIANAVSDTITSLDKFEQGIKDCLE 612 +GISGPKDWLK+QKKK++K++LAP+DASRE LRSAYL LT++ + +E L + Q+L +SAARDCVPQDRNSFVAFQANTGVEVCTFRL+VKNAASLL K DP KLEAEA+LD+LI R+K+A+A+ +TI+SLDKFEQG+KDCLE Sbjct: 58 VGISGPKDWLKDQKKKTAKYILAPIDASREILRSAYLLLTDSQPEFKEEKLEEVQRLLKSAARDCVPQDRNSFVAFQANTGVEVCTFRLIVKNAASLLDKNDPAKLEAEAILDDLIRSFTSLDGLANEANVQLASDRQKVADALMNTISSLDKFEQGVKDCLE 220 The following BLAST results are available for this feature:
BLAST of Ca_04951 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_04951 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_04951_v1.0_kabuli ID=Ca_04951_v1.0_kabuli; Name=Ca_04951; organism=Cicer arietinum; type=mRNA; length=618bpback to top protein sequence of Ca_04951_v1.0_kabuli >Ca_04951_v1.0_kabuli ID=Ca_04951_v1.0_kabuli; Name=Ca_04951_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=205bpback to top mRNA from alignment at Ca5:32475955..32480156+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_04951_v1.0_kabuli ID=Ca_04951_v1.0_kabuli; Name=Ca_04951; organism=Cicer arietinum; type=mRNA; length=4202bp; location=Sequence derived from: Ca5:32475955..32480156+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:32475955..32480156+ >Ca_04951_v1.0_kabuli ID=Ca_04951_v1.0_kabuli; Name=Ca_04951; organism=Cicer arietinum; type=CDS; length=618bp; location=Sequence derived from: Ca5:32475955..32480156+ (Cicer arietinumback to top |