Ca_07445, Ca_07445_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_07445
Unique NameCa_07445_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length300
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:38927889..38928407 -Cicer arietinum CDC Frontier genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum CDC Frontier genome v1.02013-01-01
Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot2019-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR378Pisum sativum Cameor genome v1aPisum sativum
capsR406Pisum sativum Cameor genome v1aPisum sativum
cavuR376Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR445Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR451Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR495Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0651Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0666Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0025Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0035Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0230Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0394Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0768Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL040Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL570Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR348Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR372Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR378Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR379Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR427Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR430Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR420Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR409Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR417Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR480Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR364Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR414Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL262Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL561Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR380Cicer arietinum
cacarR418Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-KK1_008838Cajanus cajan Asha genome v1.0Cajanus cajan
LR48_mrnaVigan04g067300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Hedin2.R1.2g089320.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_15789Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.009G173800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg52855.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr09.136Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.2g073480.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat05G0344700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Va04G018340.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014645010.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun09g093900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004501815.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_07445-CDS1Ca_07445-CDS1Cicer arietinumCDS
Ca_07445-CDS2Ca_07445-CDS2Cicer arietinumCDS
Ca_07445-CDS3Ca_07445-CDS3Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_07445_v1.0_kabuliCa_07445_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_07445 vs. SwissProt
Match: PCH2_ARATH (Pachytene checkpoint protein 2 homolog OS=Arabidopsis thaliana GN=At4g24710 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.703e-25
Identity = 52/96 (54.17%), Postives = 72/96 (75.00%), Query Frame = 1 
Query:   10 GILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD 297
            GI++S + C  + +P+++S K +L+  + H+  T     KQL+E A+ CEG+SGRSLRKLPFLAHAALA+P+  +P  FLCTMIETAKRE+SE P+
Sbjct:  372 GIISSFQGCDGLSIPSFSSLKEKLSESEVHDTNTVPWFCKQLIEAAKGCEGLSGRSLRKLPFLAHAALADPYSHDPSNFLCTMIETAKREKSEQPE 467
[Close]
BLAST of Ca_07445 vs. SwissProt
Match: PCH2_ORYSJ (Pachytene checkpoint protein 2 homolog OS=Oryza sativa subsp. japonica GN=Os04g0479000 PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 2.402e-15
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSE 288
            +R GILT ++   ++ L +Y S     + P+  +   S+ L   L + AE CEG+SGR+LRKLPFLAHA++ANP  C+   FL  +I+TA+RE SE
Sbjct:  373 LRVGILTHTQGGNSLCLLSYFSLMENQHCPEVADPHGSVHLSGLLHKAAEICEGLSGRTLRKLPFLAHASVANPSCCDASAFLHALIQTAQRELSE 468
[Close]
BLAST of Ca_07445 vs. SwissProt
Match: PCH2_ORYSI (Pachytene checkpoint protein 2 homolog OS=Oryza sativa subsp. indica GN=OsI_16324 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.402e-15
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSE 288
            +R GILT ++   ++ L +Y S     + P+  +   S+ L   L + AE CEG+SGR+LRKLPFLAHA++ANP  C+   FL  +I+TA+RE SE
Sbjct:  373 LRVGILTHTQGGNSLCLLSYFSLMENQHCPEVADPHGSVHLSGLLHKAAEICEGLSGRTLRKLPFLAHASVANPSCCDASAFLHALIQTAQRELSE 468
[Close]
BLAST of Ca_07445 vs. TrEMBL
Match: G7J4A8_MEDTR (Thyroid receptor-interacting protein OS=Medicago truncatula GN=MTR_3g076930 PE=4 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 2.455e-44
Identity = 88/99 (88.89%), Postives = 94/99 (94.95%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD 297
            MRTGILT+ EDCKNI+LPNYASAK R+NAPDFHE TT MQL K+LVETAEACEGMSGRSLRKLPFLAHAALANPF+CNPIKFLCTMI+TAKRERSELPD
Sbjct:  363 MRTGILTNFEDCKNIMLPNYASAKQRMNAPDFHEATTFMQLCKKLVETAEACEGMSGRSLRKLPFLAHAALANPFDCNPIKFLCTMIDTAKRERSELPD 461
[Close]
BLAST of Ca_07445 vs. TrEMBL
Match: I1KCB2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.218e-43
Identity = 87/99 (87.88%), Postives = 91/99 (91.92%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD 297
            MRTGILTS +DCKN++ PNYASAK RLN PDFHE  T MQL KQL+ETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD
Sbjct:  350 MRTGILTSLQDCKNVMFPNYASAKDRLNTPDFHEDATFMQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD 448
[Close]
BLAST of Ca_07445 vs. TrEMBL
Match: I1JXC0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 8.730e-42
Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD 297
            MRTGILTS +DCKN +LP+YASAK RLN  DFHE  T MQL KQL+ETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTM+ETAKRERSELPD
Sbjct:  350 MRTGILTSLQDCKNAMLPHYASAKDRLNTLDFHEDATFMQLCKQLLETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMVETAKRERSELPD 448
[Close]
BLAST of Ca_07445 vs. TrEMBL
Match: M5W9C8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005496mg PE=4 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 5.869e-30
Identity = 64/99 (64.65%), Postives = 83/99 (83.84%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD 297
            +RTGIL++ EDC++++LPNY S K +LN P+  +  T + + KQL+ETAEACEG+SGRSLRKLPFL HAALA+P+ C+P KFL TMI+TA+RERSELPD
Sbjct:  360 IRTGILSNFEDCESLMLPNYGSLKEKLNMPEVQDART-LHMCKQLLETAEACEGLSGRSLRKLPFLGHAALASPYGCDPSKFLSTMIDTARRERSELPD 457
[Close]
BLAST of Ca_07445 vs. TrEMBL
Match: B9RAU0_RICCO (Thyroid hormone receptor interactor, putative OS=Ricinus communis GN=RCOM_1508630 PE=4 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.561e-27
Identity = 59/99 (59.60%), Postives = 79/99 (79.80%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD 297
            +RTGI+++ +D  N+VLPNY + K ++N     E  T ++L KQL+E AEACEG+SGRSLRKLPFLAHAAL++P+ C+P KFL TM++ A+RERSELPD
Sbjct:  362 IRTGIISNFQDPDNLVLPNYPTLKEKMNGSAAQEAQTPVKLGKQLLEAAEACEGLSGRSLRKLPFLAHAALSDPYSCDPSKFLSTMMDAARRERSELPD 460
[Close]
BLAST of Ca_07445 vs. TrEMBL
Match: A9PDV0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_728506 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 6.074e-27
Identity = 58/99 (58.59%), Postives = 77/99 (77.78%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD 297
            +RTGI+++ +D   ++LPNY++ + +LNAPD  E    +   KQL+E AEACEGMSGRSLRKLPFLAHAAL+NP  C+  +FLC MI+TA+RE SELP+
Sbjct:  366 LRTGIISNFQDSDYLMLPNYSTLREKLNAPDIQEAQPVLPFCKQLLEAAEACEGMSGRSLRKLPFLAHAALSNPNSCDASEFLCAMIDTARREHSELPE 464
[Close]
BLAST of Ca_07445 vs. TrEMBL
Match: K4DGF3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc12g076320.1 PE=4 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.266e-24
Identity = 61/99 (61.62%), Postives = 75/99 (75.76%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD 297
            +RTGIL++S+D   +VLP+YAS K +++     E      L KQL+E AEACEGMSGRSLRKLPFLAHAALANP+ C P KFL  M++TAKRERSEL +
Sbjct:   48 LRTGILSNSQDGGCLVLPSYASLKEKMSEVVSTESQMFPHLGKQLLEAAEACEGMSGRSLRKLPFLAHAALANPYSCEPGKFLHVMMQTAKRERSELSE 146
[Close]
BLAST of Ca_07445 vs. TrEMBL
Match: D7SHI6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g09320 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 8.209e-24
Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRE 279
            +R GILT+S++C  + L +Y   K +LN     E   S  L KQL+E AEACEG+SGRSLRKLPFLAHAALANP+ C+P KFLCTM +TAKRE
Sbjct:  356 VRAGILTNSQECDRLSLLSYTGLKEKLNVAQIEEPGNS-HLCKQLLEAAEACEGLSGRSLRKLPFLAHAALANPYSCDPSKFLCTMTDTAKRE 447
[Close]
BLAST of Ca_07445 vs. TrEMBL
Match: D7MGN6_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_492371 PE=4 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 6.949e-23
Identity = 52/96 (54.17%), Postives = 71/96 (73.96%), Query Frame = 1 
Query:   10 GILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD 297
            GI++S + C  + +P+++S K + N  + H+  T     KQL+E A+ CEG+SGRSLRKLPFLAHAALA+P+  +P  FLCTMIETAKRE+SE P+
Sbjct:  382 GIISSFQGCDGLSIPSFSSLKEKANESEVHDINTVPWFCKQLIEAAKGCEGLSGRSLRKLPFLAHAALADPYSHDPSNFLCTMIETAKREKSEQPE 477
[Close]
BLAST of Ca_07445 vs. TrEMBL
Match: B9IEZ9_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_252336 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.185e-22
Identity = 53/96 (55.21%), Postives = 73/96 (76.04%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSE 288
            +RTGI+++ +   ++VLP+Y++ + +LNAP   E    +   KQL+E AEACEGMSGRSLRKLPFLAH AL++P+ CN  +FLC MI+TA+RE SE
Sbjct:  317 LRTGIVSNFQGSDHLVLPDYSTLREKLNAPT--EAQPVLNFCKQLLEAAEACEGMSGRSLRKLPFLAHGALSDPYSCNASEFLCAMIDTARREHSE 410
[Close]
BLAST of Ca_07445 vs. DB:Swiss
Match: PCH2_ARATH (Pachytene checkpoint protein 2 homolog OS=Arabidopsis thaliana OX=3702 GN=PCH2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.607e-30
Identity = 52/99 (52.53%), Postives = 73/99 (73.74%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD 297
            +  GI++S + C  + +P+++S K +L+  + H+  T     KQL+E A+ CEG+SGRSLRKLPFLAHAALA+P+  +P  FLCTMIETAKRE+SE P+
Sbjct:  369 ISKGIISSFQGCDGLSIPSFSSLKEKLSESEVHDTNTVPWFCKQLIEAAKGCEGLSGRSLRKLPFLAHAALADPYSHDPSNFLCTMIETAKREKSEQPE 467
[Close]
BLAST of Ca_07445 vs. DB:Swiss
Match: PCH2_ORYSJ (Pachytene checkpoint protein 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=CRC1 PE=1 SV=4)

HSP 1 Score: 82.0333 bits (201), Expect = 1.742e-18
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSE 288
            +R GILT ++   ++ L +Y S     + P+  +   S+ L   L + AE CEG+SGR+LRKLPFLAHA++ANP  C+   FL  +I+TA+RE SE
Sbjct:  377 LRVGILTHTQGGNSLCLLSYFSLMENQHCPEVADPHGSVHLSGLLHKAAEICEGLSGRTLRKLPFLAHASVANPSCCDASAFLHALIQTAQRELSE 472
[Close]
BLAST of Ca_07445 vs. DB:Swiss
Match: PCH2_ORYSI (Pachytene checkpoint protein 2 homolog OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16324 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 2.856e-18
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1 
Query:    1 MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSE 288
            +R GILT ++   ++ L +Y S     + P+  +   S+ L   L + AE CEG+SGR+LRKLPFLAHA++ANP  C+   FL  +I+TA+RE SE
Sbjct:  373 LRVGILTHTQGGNSLCLLSYFSLMENQHCPEVADPHGSVHLSGLLHKAAEICEGLSGRTLRKLPFLAHASVANPSCCDASAFLHALIQTAQRELSE 468
The following BLAST results are available for this feature:
BLAST of Ca_07445 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
PCH2_ARATH5.703e-2554.17Pachytene checkpoint protein 2 homolog OS=Arabidop... [more]
PCH2_ORYSJ2.402e-1544.79Pachytene checkpoint protein 2 homolog OS=Oryza sa... [more]
PCH2_ORYSI2.402e-1544.79Pachytene checkpoint protein 2 homolog OS=Oryza sa... [more]
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BLAST of Ca_07445 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 22
Match NameE-valueIdentityDescription
G7J4A8_MEDTR2.455e-4488.89Thyroid receptor-interacting protein OS=Medicago t... [more]
I1KCB2_SOYBN1.218e-4387.88Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1JXC0_SOYBN8.730e-4285.86Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
M5W9C8_PRUPE5.869e-3064.65Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9RAU0_RICCO3.561e-2759.60Thyroid hormone receptor interactor, putative OS=R... [more]
A9PDV0_POPTR6.074e-2758.59Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
K4DGF3_SOLLC1.266e-2461.62Uncharacterized protein OS=Solanum lycopersicum GN... [more]
D7SHI6_VITVI8.209e-2461.29Putative uncharacterized protein OS=Vitis vinifera... [more]
D7MGN6_ARALL6.949e-2354.17Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9IEZ9_POPTR1.185e-2255.21Predicted protein (Fragment) OS=Populus trichocarp... [more]

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BLAST of Ca_07445 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
PCH2_ARATH3.607e-3052.53Pachytene checkpoint protein 2 homolog OS=Arabidop... [more]
PCH2_ORYSJ1.742e-1844.79Pachytene checkpoint protein 2 homolog OS=Oryza sa... [more]
PCH2_ORYSI2.856e-1844.79Pachytene checkpoint protein 2 homolog OS=Oryza sa... [more]
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Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_07445_v1.0_kabuli ID=Ca_07445_v1.0_kabuli; Name=Ca_07445; organism=Cicer arietinum; type=mRNA; length=300bp
ATGCGTACAGGGATATTAACTAGTTCTGAGGATTGTAAGAATATTGTGCT
TCCAAATTATGCTAGTGCAAAACCGAGGTTGAACGCACCAGATTTTCATG
AGGGTACTACATCCATGCAACTGTTCAAGCAATTAGTTGAAACTGCAGAA
GCATGTGAGGGAATGAGTGGAAGGTCTCTCAGAAAGCTTCCATTTTTGGC
ACATGCTGCACTTGCAAATCCTTTTGAATGCAACCCCATCAAGTTCTTAT
GTACAATGATAGAAACAGCAAAAAGGGAGCGCTCTGAGCTTCCTGACTAA
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protein sequence of Ca_07445_v1.0_kabuli

>Ca_07445_v1.0_kabuli ID=Ca_07445_v1.0_kabuli; Name=Ca_07445_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=99bp
MRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAE
ACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD
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mRNA from alignment at Ca5:38927889..38928407-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_07445_v1.0_kabuli ID=Ca_07445_v1.0_kabuli; Name=Ca_07445; organism=Cicer arietinum; type=mRNA; length=519bp; location=Sequence derived from: Ca5:38927889..38928407- (Cicer arietinum
ATGCGTACAGGGATATTAACTAGTTCTGAGGTGCAAATAGATCTAATTTT
TGTCCTGGAATATTTTTTGAAAATGAAAGGCATGGATTTTCTAATCTTTA
TTCGGATTCAAATATTTTAGTTTGTTAGTCTTATGGATAATCATGCTGAC
TTGGTTAGGATTGTAAGAATATTGTGCTTCCAAATTATGCTAGTGCAAAA
CCGAGGTTGAACGCACCAGATTTTCATGAGGGTACTACATCCATGCAACT
GTTCAAGCAATTAGTTGAAACTGCAGAAGCATGTGAGGTAGGAAAAAATA
TAATATTTCTCGATCCTTAACCTCACAATCTATCGGTTGACTTTTATATC
TCAACTGTTGTGTTTGATCCGTCTATAGGGAATGAGTGGAAGGTCTCTCA
GAAAGCTTCCATTTTTGGCACATGCTGCACTTGCAAATCCTTTTGAATGC
AACCCCATCAAGTTCTTATGTACAATGATAGAAACAGCAAAAAGGGAGCG
CTCTGAGCTTCCTGACTAA
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Coding sequence (CDS) from alignment at Ca5:38927889..38928407-

>Ca_07445_v1.0_kabuli ID=Ca_07445_v1.0_kabuli; Name=Ca_07445; organism=Cicer arietinum; type=CDS; length=300bp; location=Sequence derived from: Ca5:38927889..38928407- (Cicer arietinum
ATGCGTACAGGGATATTAACTAGTTCTGAGGATTGTAAGAATATTGTGCT
TCCAAATTATGCTAGTGCAAAACCGAGGTTGAACGCACCAGATTTTCATG
AGGGTACTACATCCATGCAACTGTTCAAGCAATTAGTTGAAACTGCAGAA
GCATGTGAGGGAATGAGTGGAAGGTCTCTCAGAAAGCTTCCATTTTTGGC
ACATGCTGCACTTGCAAATCCTTTTGAATGCAACCCCATCAAGTTCTTAT
GTACAATGATAGAAACAGCAAAAAGGGAGCGCTCTGAGCTTCCTGACTAA
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