Ca_05004, Ca_05004_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_05004
Unique NameCa_05004_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length411
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:33072274..33073064 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR381Pisum sativum Cameor genome v1aPisum sativum
capsR382Pisum sativum Cameor genome v1aPisum sativum
capsR427Pisum sativum Cameor genome v1aPisum sativum
cavuR392Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR434Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR440Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR512Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0652Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0331Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0383Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0765Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL284Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL558Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR353Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR375Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR400Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR425Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR402Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR428Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR409Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR438Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR463Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR372Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR421Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR187Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR215Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL031Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL277Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL546Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR378Cicer arietinum
cacarR393Cicer arietinum
cacarR411Cicer arietinum
cacarR428Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_022780289.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg55706.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan04g205200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va04G060160.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.2g196520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.009G113100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat05G0065300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Tiffany.R1.2g159440.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_28489Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun09g189100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004501028.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_05004-CDS1Ca_05004-CDS1Cicer arietinumCDS
Ca_05004-CDS2Ca_05004-CDS2Cicer arietinumCDS
Ca_05004-CDS3Ca_05004-CDS3Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_05004_v1.0_kabuliCa_05004_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_05004 vs. SwissProt
Match: EPFL2_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.097e-19
Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = 1
Query:   49 ILCLILFASTSFFPHLVFMAEGRAISNVNQVAKKGMEENGSMLVEKFQIGSRPPKCER-RCIKCGHCEAVQVPIVPSKVQIHR----SHYSEATLITYSSTRGDGLSNYKPISWKCKCGDYFFNP 408
            +L L++  ST    H   MA GR   +  +  K G ++   M+  +  IGSRPP+CER RC  CGHCEA+QVP  P + ++H     S  S +  I    TRGD  +NYKP+SWKCKCG+  +NP
Sbjct:   11 LLILLILNST----HFSLMANGRPEPDSVEFTKSGDQDVKMMM--RGLIGSRPPRCERVRCRSCGHCEAIQVPTNP-QTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128          
BLAST of Ca_05004 vs. SwissProt
Match: EPFL1_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana GN=EPFL1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.530e-12
Identity = 33/99 (33.33%), Postives = 53/99 (53.54%), Query Frame = 1
Query:  121 ISNVNQVAKKGMEENGSMLVEKFQIGSRPPKCERRCIKCGHCEAVQVPIVPSKVQIHRSHYSEATLITYSS---TRGDGLSNYKPISWKCKCGDYFFNP 408
            +S+  Q  +  +    +++ +K ++GS PP C  RC  C  C A+QVP +P++ +  R +      +   S   T  D  SNYKP+ WKC C  +F+NP
Sbjct:   24 VSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122          
BLAST of Ca_05004 vs. TrEMBL
Match: G7J405_MEDTR (EPIDERMAL PATTERNING FACTOR-like protein OS=Medicago truncatula GN=MTR_3g110550 PE=4 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 7.694e-51
Identity = 105/139 (75.54%), Postives = 112/139 (80.58%), Query Frame = 1
Query:    1 MSRT-QMYLCCHKCRQI--ILCLILFASTSFFPHLVFMAEGRAISNVNQVAKKGMEENGSMLVEKFQIGSRPPKCERRCIKCGHCEAVQVPIVPSKVQIHRSHYSEATLITYSSTRGDGLSNYKPISWKCKCGDYFFNP 408
            MSRT +M L CHK  QI  I+C+ILFASTS     +FMAEGR ISN+N+VAK GMEENGSML EK QIGSRPPKCERRC  C HCEAVQVPIVPSKVQIHRSHY  A      S+RGDGLSNYKPISWKCKCGDYFFNP
Sbjct:    1 MSRTSKMSLSCHKYTQIFIIICIILFASTS-----IFMAEGRPISNLNEVAKNGMEENGSMLAEKLQIGSRPPKCERRCRSCVHCEAVQVPIVPSKVQIHRSHYDSAAY----SSRGDGLSNYKPISWKCKCGDYFFNP 130          
BLAST of Ca_05004 vs. TrEMBL
Match: K7KIZ5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.010e-34
Identity = 82/140 (58.57%), Postives = 101/140 (72.14%), Query Frame = 1
Query:    1 MSRTQMYLCCHKCRQI-ILCLILFASTSFFPHLVFMAEGRAISNVNQVAKKGMEENGSMLVEKFQIGSRPPKCERRCIKCGHCEAVQVPIVPSKVQIHRSHYSEA---TLITYSSTRGDGLSNYKPISWKCKCGDYFFNP 408
            MS TQ+ + CHK RQI  +CLILFA       +VF A+GRAIS+  +VA+   E++  ++V K +IGSRPPKCE+RC  CGHCEAVQVP+ P ++Q HR HYS A     +TYSS R D LSNYKP+SWKCKCGDY FNP
Sbjct:    1 MSITQVCVSCHKYRQITFICLILFA-------IVFTAQGRAISSFIEVAQ---EKDMRIMVAKPRIGSRPPKCEKRCNTCGHCEAVQVPVAP-QIQTHRRHYSSARATKAVTYSS-RDDHLSNYKPMSWKCKCGDYLFNP 128          
BLAST of Ca_05004 vs. TrEMBL
Match: I1K9I6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 8.546e-34
Identity = 81/141 (57.45%), Postives = 95/141 (67.38%), Query Frame = 1
Query:    1 MSRTQMYLCCHKCRQI-ILCLILFASTSFFPHLVFMAEGRAISNVNQVAKKGMEENGSMLVEKFQIGSRPPKCERRCIKCGHCEAVQVPIVPSKVQIH-RSHYSE---ATLITYSSTRGDGLSNYKPISWKCKCGDYFFNP 408
            M  TQ+ + CHK RQI  +CLILFA       +VF  +GR IS+  +VA K M     ++V K +IGSRPPKCE+RC  CGHCEAVQVP+VP   Q H R HYS       +TYSS RGD LSNYKP+SWKCKCGDY FNP
Sbjct:    1 MGITQVCVSCHKYRQITFICLILFA-------IVFTTQGRTISSFVEVAPKEMR----IMVAKPRIGSRPPKCEKRCSSCGHCEAVQVPVVPQIFQTHRRRHYSSERATKAVTYSS-RGDDLSNYKPMSWKCKCGDYLFNP 129          
BLAST of Ca_05004 vs. TrEMBL
Match: A5AE93_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001850 PE=4 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.012e-26
Identity = 67/126 (53.17%), Postives = 86/126 (68.25%), Query Frame = 1
Query:   40 RQIILCLILFASTSFFPHLVFMAEGRAISN-VNQVAK--KGMEENGSMLVEKFQIGSRPPKCERRCIKCGHCEAVQVPIVPSKVQIHRSHYSEATLITYSSTRGDGLSNYKPISWKCKCGDYFFNP 408
            RQ+I+ L++  +++F     FMAEGR +S  V  VA+  KG EE   M+V + QIGSRPP+C+RRC  CGHCEAVQVPIVP       SH+  A  + YS  RGD +SNYKP++WKCKCG+  FNP
Sbjct:  415 RQLIISLLILLASNFTQER-FMAEGRLVSKLVGXVAQTYKGREE---MVVMRNQIGSRPPRCQRRCSSCGHCEAVQVPIVPQLHSHRTSHFYAAPTVEYS--RGDYISNYKPMTWKCKCGNAIFNP 534          
BLAST of Ca_05004 vs. TrEMBL
Match: B9R6S9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1584940 PE=4 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.368e-23
Identity = 59/136 (43.38%), Postives = 78/136 (57.35%), Query Frame = 1
Query:    1 MSRTQMYLCCHKCRQIILCLILFASTSFFPHLVFMAEGRAISNVNQVAKKGMEENGSMLVEKFQIGSRPPKCERRCIKCGHCEAVQVPIVPSKVQIHRSHYSEATLITYSSTRGDGLSNYKPISWKCKCGDYFFNP 408
            M   Q    C++ R + + L LF   S    + F+AEGRAI    +   +  E +  M V    IGS PP+C+RRC  CGHCEAVQVP+    V   RS +    +   + +RGDG+SNYKP+SWKCKCG+  FNP
Sbjct:    1 MGSAQFCYFCNRNRHLTISL-LFLLLSCSTLVRFVAEGRAIPKPLESETQKEEMDEKMAVRSRVIGSTPPRCDRRCNSCGHCEAVQVPVTTRIVSHKRSAHLSTAISNIAYSRGDGISNYKPMSWKCKCGNLIFNP 135          
BLAST of Ca_05004 vs. TrEMBL
Match: B9T176_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0338850 PE=4 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.280e-21
Identity = 55/130 (42.31%), Postives = 75/130 (57.69%), Query Frame = 1
Query:   19 YLCCHKCRQIILCLILFASTSFFPHLVFMAEGRAISNVNQVAKKGMEENGSMLVEKFQIGSRPPKCERRCIKCGHCEAVQVPIVPSKVQIHRSHYSEATLITYSSTRGDGLSNYKPISWKCKCGDYFFNP 408
            +L C +   + +   +F   S    + F AEGRA       ++   EE    ++ + QIGSRPP+CE+RC  CGHCEA+QVP  P ++     +YS +T    +  RGD  SNYKP+SWKCKCGD  FNP
Sbjct:   11 FLLCQRLGYVTISF-MFLLISSSTQVRFKAEGRATPKSASFSQTVNEEK---MLMRSQIGSRPPRCEKRCSTCGHCEAIQVPTNP-QINHGNRNYSSSTFSNVAYARGDDASNYKPMSWKCKCGDLIFNP 135          
BLAST of Ca_05004 vs. TrEMBL
Match: A5AQ12_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037684 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.672e-21
Identity = 57/121 (47.11%), Postives = 80/121 (66.12%), Query Frame = 1
Query:   49 ILCLILFASTSFFPHLVFMAEGRAISNVNQVAKKGMEENGSMLVEKFQIGSRPPKCERRCIKCGHCEAVQVPIVPSKVQIHRSHYSEATLI-TYSSTRGDGLSNYKPISWKCKCGDYFFNP 408
            +L L++ +ST     L FMAEGRA+        + + E  +++  + QIGSRPPKCERRC  CGHCEA+QVP  P   Q+   + + +T++ T + +RGD  SNYKP+SWKCKCG++ FNP
Sbjct:   20 LLFLLILSSTQ----LKFMAEGRAVLFKPVGFSQPVSEEKAIV--RAQIGSRPPKCERRCNSCGHCEAIQVPANP---QVKTPNTNSSTVVGTIAYSRGDDNSNYKPMSWKCKCGNFVFNP 131          
BLAST of Ca_05004 vs. TrEMBL
Match: E0CNW2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g08350 PE=4 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.183e-21
Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 1
Query:  172 MLVEKFQIGSRPPKCERRCIKCGHCEAVQVPIVPSKVQIHRSHYSEATLITYSSTRGDGLSNYKPISWKCKCGDYFFNP 408
            M+V + QIGSRPP+C+RRC  CGHCEAVQVPIVP       SH+  A  + YS  RGD +SNYKP++WKCKCG+  FNP
Sbjct:    1 MVVMRNQIGSRPPRCQRRCSSCGHCEAVQVPIVPQLHSHRTSHFYAAPTVEYS--RGDYISNYKPMTWKCKCGNAIFNP 77          
BLAST of Ca_05004 vs. TrEMBL
Match: M5XQI3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026285mg PE=4 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 8.297e-21
Identity = 62/143 (43.36%), Postives = 75/143 (52.45%), Query Frame = 1
Query:   10 TQMYLCCHKCRQIILCLILFASTSFFPHLVFMAEGRAISNVNQVAKKGMEENGSMLVEKFQIGSRPPKCERRCIKCGHCEAVQVPIVPSKVQIHRSHYSEATL----------ITYSSTRGDGLSNYKPISWKCKCGDYFFNP 408
            TQ   C H+ R +I+ + L   +S   HL FMAE   + N  Q                  IGSRPP+CE RC  CGHC AVQVP+ P +VQ H    S  +L          + YS  RGD ++NYKPISWKCKCGD  FNP
Sbjct:    1 TQNCACWHRNRHLIISIFLLLVSSS-THLRFMAEAGVVVNARQ------------------IGSRPPRCESRCSACGHCVAVQVPVSP-QVQGHSKIRSHGSLPDSTRTSPKNVAYS--RGDDITNYKPISWKCKCGDLLFNP 121          
BLAST of Ca_05004 vs. TrEMBL
Match: C8YZB7_CAPAN (UPA25 OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.414e-20
Identity = 61/141 (43.26%), Postives = 84/141 (59.57%), Query Frame = 1
Query:    1 MSRTQMYLCCHKCRQIILCLILFASTSFFPHLVFMAEGRAISNVNQ-VAKKGMEENGSMLVEKFQIGSRPPKCERRCIKCGHCEAVQVPIVPS----KVQIHRSHYSEATLITYSSTRGDGLSNYKPISWKCKCGDYFFNP 408
            M  +Q+ L  H+  Q I+ L+L    S   H+   AEGR I  +   + ++  EE   +L  +  IGSRPP+CE RC  CG CEAVQVPIVP+    + +I + +      + YS  RGD +SNYKP+ WKCKCG++FFNP
Sbjct:    1 MGCSQLLLFWHRNLQTIIFLLLLF-ISGLTHVRLTAEGRRILKLQTGITQRKNEEK--VLKMRSLIGSRPPRCEGRCRNCGPCEAVQVPIVPALKHQQTRISQLNAIPKFFLAYS--RGDDISNYKPMCWKCKCGNFFFNP 136          
BLAST of Ca_05004 vs. DB:Swiss
Match: EPFL2_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.214e-23
Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = 1
Query:   91 HLVFMAEGRAISNVNQVAKKGMEENGSMLVEKFQIGSRPPKCER-RCIKCGHCEAVQVPIVP-----SKVQIHRSHYSEATLITYSSTRGDGLSNYKPISWKCKCGDYFFNP 408
            H   MA GR   +  +  K G ++   M+  +  IGSRPP+CER RC  CGHCEA+QVP  P     S +    S  SE   + Y  TRGD  +NYKP+SWKCKCG+  +NP
Sbjct:   21 HFSLMANGRPEPDSVEFTKSGDQDVKMMM--RGLIGSRPPRCERVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDY--TRGDDSTNYKPMSWKCKCGNSIYNP 128          
BLAST of Ca_05004 vs. DB:Swiss
Match: EPFL1_ARATH (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.496e-14
Identity = 33/99 (33.33%), Postives = 53/99 (53.54%), Query Frame = 1
Query:  121 ISNVNQVAKKGMEENGSMLVEKFQIGSRPPKCERRCIKCGHCEAVQVPIVPSKVQIHRSHYSEATLITYSS---TRGDGLSNYKPISWKCKCGDYFFNP 408
            +S+  Q  +  +    +++ +K ++GS PP C  RC  C  C A+QVP +P++ +  R +      +   S   T  D  SNYKP+ WKC C  +F+NP
Sbjct:   24 VSSFLQPIQPPISPQVALIEDKARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYSNYKPMGWKCHCNGHFYNP 122          
The following BLAST results are available for this feature:
BLAST of Ca_05004 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
EPFL2_ARATH2.097e-1943.20EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arab... [more]
EPFL1_ARATH5.530e-1233.33EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arab... [more]
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BLAST of Ca_05004 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7J405_MEDTR7.694e-5175.54EPIDERMAL PATTERNING FACTOR-like protein OS=Medica... [more]
K7KIZ5_SOYBN1.010e-3458.57Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1K9I6_SOYBN8.546e-3457.45Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A5AE93_VITVI1.012e-2653.17Putative uncharacterized protein OS=Vitis vinifera... [more]
B9R6S9_RICCO1.368e-2343.38Putative uncharacterized protein OS=Ricinus commun... [more]
B9T176_RICCO1.280e-2142.31Putative uncharacterized protein OS=Ricinus commun... [more]
A5AQ12_VITVI1.672e-2147.11Putative uncharacterized protein OS=Vitis vinifera... [more]
E0CNW2_VITVI2.183e-2160.76Putative uncharacterized protein OS=Vitis vinifera... [more]
M5XQI3_PRUPE8.297e-2143.36Uncharacterized protein (Fragment) OS=Prunus persi... [more]
C8YZB7_CAPAN2.414e-2043.26UPA25 OS=Capsicum annuum PE=2 SV=1[more]

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BLAST of Ca_05004 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
EPFL2_ARATH3.214e-2345.54EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arab... [more]
EPFL1_ARATH1.496e-1433.33EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arab... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 15..35
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_05004_v1.0_kabuli ID=Ca_05004_v1.0_kabuli; Name=Ca_05004; organism=Cicer arietinum; type=mRNA; length=411bp
ATGAGCAGAACTCAAATGTATCTCTGCTGCCACAAATGTAGACAAATCAT
TCTATGTCTCATTCTCTTTGCTTCAACTTCTTTCTTCCCTCATCTTGTTT
TCATGGCTGAAGGAAGAGCAATTTCAAATGTCAATCAAGTTGCAAAGAAG
GGTATGGAAGAGAATGGATCAATGTTGGTAGAGAAATTTCAAATAGGGTC
AAGGCCTCCAAAATGCGAAAGAAGATGCATAAAATGTGGACATTGTGAAG
CAGTTCAAGTACCTATTGTACCATCTAAAGTTCAAATCCATAGAAGCCAT
TATTCAGAAGCAACTTTAATTACTTACTCTTCAACAAGAGGAGATGGCCT
TTCAAACTACAAACCTATAAGTTGGAAGTGCAAATGTGGGGATTACTTTT
TCAATCCTTGA
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protein sequence of Ca_05004_v1.0_kabuli

>Ca_05004_v1.0_kabuli ID=Ca_05004_v1.0_kabuli; Name=Ca_05004_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=136bp
MSRTQMYLCCHKCRQIILCLILFASTSFFPHLVFMAEGRAISNVNQVAKK
GMEENGSMLVEKFQIGSRPPKCERRCIKCGHCEAVQVPIVPSKVQIHRSH
YSEATLITYSSTRGDGLSNYKPISWKCKCGDYFFNP
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mRNA from alignment at Ca5:33072274..33073064-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_05004_v1.0_kabuli ID=Ca_05004_v1.0_kabuli; Name=Ca_05004; organism=Cicer arietinum; type=mRNA; length=791bp; location=Sequence derived from: Ca5:33072274..33073064- (Cicer arietinum
ATGAGCAGAACTCAAATGTATCTCTGCTGCCACAAATGTAGACAAATCAT TCTATGTCTCATTCTCTTTGCTTCAACTTCTTTCTTCCCTCATCTTGTTT TCATGGCTGAAGGTTAGTTATTTCTTGTTTCATCAATCACATAATACATG ATGATTTCTTCATTACTTGAAAAGAAAAAAAAGTACTTTTGTTCTTTTTT TCTTTCCAAATCCAACTTTGCTTATTTTTAATTTTGTCTATGATATTGAT ATGCTTGCAGGAAGAGCAATTTCAAATGTCAATCAAGTTGCAAAGGTACA AACTAAAAATCCTAAAGTGTATTAATATATTTCTTTATATAAATTTTTTT CTTTTCAACAAACGTTAAATTTTTTTTTTGCTAGAATTGTGAAAAATATT TTTATTGTTTAAGTCAACATTTTTTTCTTTCTCTTTAGACACTAATTAGT TCTTCTTTATCCTAATAAGTTACTAGTAGTATGTTTAATTAATGCGTGAT ACTTACTATATATTTAAAAATGTGTAGAAGGGTATGGAAGAGAATGGATC AATGTTGGTAGAGAAATTTCAAATAGGGTCAAGGCCTCCAAAATGCGAAA GAAGATGCATAAAATGTGGACATTGTGAAGCAGTTCAAGTACCTATTGTA CCATCTAAAGTTCAAATCCATAGAAGCCATTATTCAGAAGCAACTTTAAT TACTTACTCTTCAACAAGAGGAGATGGCCTTTCAAACTACAAACCTATAA GTTGGAAGTGCAAATGTGGGGATTACTTTTTCAATCCTTGA
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Coding sequence (CDS) from alignment at Ca5:33072274..33073064-

>Ca_05004_v1.0_kabuli ID=Ca_05004_v1.0_kabuli; Name=Ca_05004; organism=Cicer arietinum; type=CDS; length=411bp; location=Sequence derived from: Ca5:33072274..33073064- (Cicer arietinum
ATGAGCAGAACTCAAATGTATCTCTGCTGCCACAAATGTAGACAAATCAT
TCTATGTCTCATTCTCTTTGCTTCAACTTCTTTCTTCCCTCATCTTGTTT
TCATGGCTGAAGGAAGAGCAATTTCAAATGTCAATCAAGTTGCAAAGAAG
GGTATGGAAGAGAATGGATCAATGTTGGTAGAGAAATTTCAAATAGGGTC
AAGGCCTCCAAAATGCGAAAGAAGATGCATAAAATGTGGACATTGTGAAG
CAGTTCAAGTACCTATTGTACCATCTAAAGTTCAAATCCATAGAAGCCAT
TATTCAGAAGCAACTTTAATTACTTACTCTTCAACAAGAGGAGATGGCCT
TTCAAACTACAAACCTATAAGTTGGAAGTGCAAATGTGGGGATTACTTTT
TCAATCCTTGA
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