Ca_07439, Ca_07439_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_07439
Unique NameCa_07439_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length948
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:38863659..38865579 -Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR378Pisum sativum Cameor genome v1aPisum sativum
capsR406Pisum sativum Cameor genome v1aPisum sativum
cavuR376Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR445Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR451Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR495Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0666Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0025Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0035Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0230Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0394Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0768Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL040Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL570Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR348Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR372Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR378Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR379Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR427Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR430Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR413Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR417Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR480Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR364Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR414Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL262Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL561Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR380Cicer arietinum
cacarR418Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Va04G018770.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_07439-CDS1Ca_07439-CDS1Cicer arietinumCDS
Ca_07439-CDS2Ca_07439-CDS2Cicer arietinumCDS
Ca_07439-CDS3Ca_07439-CDS3Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_07439_v1.0_kabuliCa_07439_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_07439 vs. SwissProt
Match: POD1_ARATH (Protein POLLEN DEFECTIVE IN GUIDANCE 1 OS=Arabidopsis thaliana GN=POD1 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.007e-43
Identity = 118/330 (35.76%), Postives = 170/330 (51.52%), Query Frame = 1
Query:    1 MALRTAGTKLSFEVLRRTPLDEEEVSLLHRSKSD-----LTTLPDXXXXXXXXXXXXXXLLDPVDSVANSDDPHR--ITEAPLTNGRSCNGFELHAMSYCATGGCVVCEEATEASVCAVTSAPEGGSAFPTSVRGGV---EGFNFGELRQRNVNGGSTEDLAASVVGDDGGIEKDNFSGGIEKDNCSDGIGKEDCSVKASPVEKPI----------NVSERSVLTKSETVESVEWKRIMAEDPNYVFTVDKSPVAYFLEEMYNGNSLRSTTTLGNEIERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRILMTIWRILKTR 930
            MA+R++G KLSFE+L +    E + + + RS SD     + +                  ++ V+++  + D H   IT +    G +   FE + ++Y   GG                S   GG    T + G      GFNFGELRQRNVNG               G   + +S  +  D     +  E+ SV+ SP E P           +    +V+ + +T  S++WK+++A+DP+++    +SP+ YF+EE+Y G SLRSTTT GN+IERER+YDTIFRLPWRCE LID GFFVC +SFLSLLT+MP R+L+      K R
Sbjct:    1 MAIRSSGRKLSFEILSQNSSFENDDTSIRRSSSDPITGNVASESPRDYGKRKRSKKKKKKVNQVETILENGDSHSTIITGSSGDFGETTTMFE-NRLNYYGGGG----------------SGSSGGGCVVTLLDGQTVHHNGFNFGELRQRNVNGSVD------------GSNDERWSDTLSSDK---KLYMEETSVELSPSENPPFQEVQHQFPRSEINGNVVRRLDTEASLDWKQLVADDPDFLSAETRSPMKYFMEEIYGGISLRSTTTPGNDIERERIYDTIFRLPWRCEVLIDTGFFVCVNSFLSLLTVMPIRVLLIFMDAFKNR 298          
BLAST of Ca_07439 vs. TrEMBL
Match: G7J479_MEDTR (TAPT1-like protein OS=Medicago truncatula GN=MTR_3g076580 PE=4 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 8.344e-106
Identity = 215/321 (66.98%), Postives = 234/321 (72.90%), Query Frame = 1
Query:    1 MALRTAGTKLSFEVLRRTPLDEEEVSLLHRSKSDLTTLPDXXXXXXXXXXXXXXLLDPVDSVANSDDPHRITEAPLTNGRSCNG----FELHAMSYCATGGCVVCEEATEASVCAVTSAPEGGSAFPTSVRGGVEGFNFGELRQRNVNGGSTEDLAASVVGDDGGIEKDNFSGGIEKDNCSDGIGKEDCSVKASPVEKPINVS---ERSVLTKSETVESVEWKRIMAEDPNYVFTVDKSPVAYFLEEMYNGNSLRSTTTLGNEIERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRILMTIWRILKTRFASF 942
            MALRT  TKLSFEVLRRTP  EE+ SLLHRSKSD    PD              LLDPV   ANS DPHR T++P+ NG  CNG    FEL AM Y  TGG VVCEE +E SVC         S FPT+VR  VEGFNFGELRQRNVNGGS+EDL AS++GDD  I K+                KEDC  + SP+EKP  +    ERSVLTK+ET+ESV+WKRIM EDPNYVF VDKSPVAYFLEEMYNGNSLRSTTTLGNEIERE+VYDTIFRLPWRCE LIDVGFFVCFDSFLSLLTIMPTRILMTIWR+LKTRF+ F
Sbjct:    1 MALRTGNTKLSFEVLRRTPSFEEQESLLHRSKSD----PDRKKRKHRRKKK---LLDPV---ANSVDPHRETKSPIQNGIVCNGNGFGFELDAMRYSGTGGSVVCEELSEPSVC---------STFPTNVRCSVEGFNFGELRQRNVNGGSSEDLVASLIGDDNSIGKE----------------KEDCVKQMSPMEKPTKIESERERSVLTKAETIESVDWKRIMEEDPNYVFKVDKSPVAYFLEEMYNGNSLRSTTTLGNEIEREKVYDTIFRLPWRCELLIDVGFFVCFDSFLSLLTIMPTRILMTIWRLLKTRFSPF 286          
BLAST of Ca_07439 vs. TrEMBL
Match: I1KCA1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 320.472 bits (820), Expect = 4.760e-85
Identity = 182/318 (57.23%), Postives = 208/318 (65.41%), Query Frame = 1
Query:    1 MALRTAGTKLSFEVL----RRTPLDEEEVSLLHRSKSDLTTLPDXXXXXXXXXXXXXXLLDPVDSVANSDDPHRITEAPLTNGRSCNGFELHAMSYCATGG---CVVCEEATEA-SVCAVTSAPEGGSAFPTSVRGGVEGFNFGELRQRNVNGGSTEDLAASVVGDDGGIEKDNFSGGIEKDNCSDGIGKEDCSVKASPVEKPINVSERSVLTKSETVESVEWKRIMAEDPNYVFTVDKSPVAYFLEEMYNGNSLRSTTTLGNEIERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRILMTIWRILKTR 930
            MALR  G K+SFEVL    +  P +       HR+      L                    +D   +S DPH +   PL NG +CNGFEL A  YC  GG    VVCEE  EA SVCAV  A E  S   T+VRGG+EGFNFGELRQRNVN GS+ED+AA VV  D                      KED  V ASPVEKP N  +R+V+ K ETVES++WKRIMAEDPN+V++V+KSPV+YFLEEM+NGNSLRSTTTLGNE ERERVYDTIFRLPWRCE LIDVGFFVCFDSFLSLLT+MP RI+MTIWR+LKTR
Sbjct:    1 MALRNDGRKISFEVLSVEGQSDPTERNHKKRRHRASKKKKKL--------------------LDRAGDSFDPHSV---PLENGGACNGFELDASRYCCGGGGGSFVVCEEVREAESVCAVAEAREAESEEATAVRGGMEGFNFGELRQRNVNCGSSEDIAAYVVVRDE---------------------KEDGGVNASPVEKPTNEPDRNVVKKLETVESLDWKRIMAEDPNFVYSVEKSPVSYFLEEMHNGNSLRSTTTLGNEKERERVYDTIFRLPWRCELLIDVGFFVCFDSFLSLLTVMPARIMMTIWRLLKTR 274          
BLAST of Ca_07439 vs. TrEMBL
Match: I1JXD0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 319.316 bits (817), Expect = 1.060e-84
Identity = 187/316 (59.18%), Postives = 210/316 (66.46%), Query Frame = 1
Query:    1 MALRTAGTKLSFEVLRRTPLDEEEVSLLHRSKSDLTTLPDXXXXXXXXXXXXXXLLDPVDSVANSDDPHRITEAPLTNGRSCNGFELHAMSYCATGG-----CVVCEEATEA-SVCAVTSAPEGGSAFPTSVRGGVEGFNFGELRQRNVNGGSTEDLAASVVGDDGGIEKDNFSGGIEKDNCSDGIGKEDCSVKASPVEKPINVSERSVLTKSETVESVEWKRIMAEDPNYVFTVDKSPVAYFLEEMYNGNSLRSTTTLGNEIERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRILMTIWRILKTR 930
            MALR  G K+SFEVL  +  DE + +  +R K                      LLD  DS  +S DP     APL NG +CNGFEL A  YC  GG      VVCEE  EA SVCAV  A    S   T+VRGG+EGFNFGELRQRNVN GS+EDLAASVV  D                      KED  V ASPVEK  N  +R+V+ K ETVES++WKRIMAEDPN+VF+V+KSPV+YFLEEM+NGNSLRSTTTLGNE ERERVYDTIFRLPWRCE LIDVGFFVCFDSFLSLLT+MP RI+MTIWR+LKTR
Sbjct:    1 MALRNGGRKISFEVL--SVEDESDPTERNRKKR-----------RHRASKKKKKLLDRADS--DSADPR---SAPLENGGACNGFELDASRYCGGGGGGGGSVVVCEEVREAESVCAVAEARGAESEEATAVRGGIEGFNFGELRQRNVNCGSSEDLAASVVVRDE---------------------KEDGGVNASPVEKATNEPDRNVVKKLETVESLDWKRIMAEDPNFVFSVEKSPVSYFLEEMHNGNSLRSTTTLGNEKERERVYDTIFRLPWRCELLIDVGFFVCFDSFLSLLTVMPARIMMTIWRLLKTR 277          
BLAST of Ca_07439 vs. TrEMBL
Match: M5XAV8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003049mg PE=4 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.157e-53
Identity = 143/322 (44.41%), Postives = 179/322 (55.59%), Query Frame = 1
Query:    1 MALRTAGTKLSFEVLRRTPLDEEEVSLLHRSKSDLTTLPDXXXXXXXXXXXXXXLLD-----------PVDSVANSDDPHRITEAP-LTNGRSCNGFELHAMSYCATGGCVVCEEATEASVCAVTSAPEGGSAFPTSVRGGVEGFNFGELRQRNVNGGSTEDLAASVVGDDGGIEKDNFSGGIEKDNCSDGIGKEDCSVKASPVEKPINVSERSVLTKSETVESVEWKRIMAEDPNYVFTVDKSPVAYFLEEMYNGNSLRSTTTLGNEIERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRILMTIWRILKTR 930
            MAL++ G  LSF++L R    +EE ++ +RS SD                      +           P ++  ++  PH  +     T+G + +G E    SY  T   V+C   TE S       PE      T+           ELRQR VNG      A  VVG     E    S  IE ++      KED  V+A  V K  +    + + K +T ES++WKR+MAEDPNY+F+VDKSPV YF+EEM NGNSLRSTTTLGNE ERERVYDTIFRLPWRCE LIDVGFFVCFDSFLSLLTIMPTRI+MT+WR+L +R
Sbjct:    1 MALKSTGRNLSFDILSRNGSLDEEEAIFYRSNSDPIQSNHHNNDKPARRKRKKKKKNTTTTHSSIPESPTNATVSNSFPHNSSSKNGETSGINGSGLEF---SYSQT---VLCPATTEVS------DPEFQKLRGTA-----------ELRQRPVNGS-----AGGVVG-----ETQTTSFRIEAED------KEDSGVEAGSVSKQRSEPNGNAVPKLQTAESLDWKRLMAEDPNYLFSVDKSPVKYFMEEMSNGNSLRSTTTLGNEKERERVYDTIFRLPWRCELLIDVGFFVCFDSFLSLLTIMPTRIVMTLWRLLNSR 283          
BLAST of Ca_07439 vs. TrEMBL
Match: D7T8I0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g06070 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.108e-49
Identity = 144/336 (42.86%), Postives = 180/336 (53.57%), Query Frame = 1
Query:    1 MALRTAGTKLSFEVLRRTPLDEEEVSLLHRSKSD----------------LTTLPDXXXXXXXXXXXXXXLLDPV-----DSVANSDDPHRITEAPLTNGRSCNGFELHAMSYCATGGCVVCEEATEASVCAVTSAPEGGSAFPTSVRGGVEGFNFGELRQRNVNG-GSTEDLAASVV----GDDGGIEKDNFSGGIEKDNCSDGIGKEDCSVKASPVEKPINVSERSVLTKSETVESVEWKRIMAEDPNYVFTVDKSPVAYFLEEMYNGNSLRSTTTLGNEIERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRILMTIWRILKTR 930
            M LR  G KLSFE+L  +   E+E +L +RS SD                     +                DPV     DSV   DDP R+      NG   NGF+++  +Y       V EE    SV  V   PE  S F  ++RG  +G    ELRQR+VNG G  E++A S V     ++ GIE    S G ++   + GI K+                        ++ ES++WKR M EDP Y  +++KSP+ YF+EEMY+GNSL+STTTLGNE ERERVYDTIFRLPWRCE LIDVGFFVC DSFLSLLTIMPTRILM +WR+L  R
Sbjct:    1 MDLRRGGRKLSFEILSASNSIEDEETLSYRSNSDPIHEDAGVSPSESRTNRRKRKNKGSKKKKKTITCPIDEDPVTDKGIDSVF--DDPARVV---FENGSCPNGFDVNYQNYSMQSVVTVLEE----SVRTVLQVPE--SEFQ-NLRG--DGHLLAELRQRSVNGSGGGEEVAGSQVDVNVAEESGIEVS--SSGKQRGEPNGGIVKQ-----------------------LDSAESLDWKRFMVEDPTYSSSLEKSPLKYFMEEMYSGNSLQSTTTLGNEKERERVYDTIFRLPWRCELLIDVGFFVCLDSFLSLLTIMPTRILMALWRLLNAR 297          
BLAST of Ca_07439 vs. TrEMBL
Match: B9HVS7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_805090 PE=4 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.121e-44
Identity = 125/314 (39.81%), Postives = 162/314 (51.59%), Query Frame = 1
Query:    1 MALRTAGTKLSFEVLRRTPLDEE-EVSLLHRSKSDLTTLPDXXXXXXXXXXXXXXLLDPVDSVANSDDPHRITEAPLTNGRSCNGFELHAMSYCATGGCVVCEEATEASVCAVTSAPEGGSAFPTSVRGGVEGFNFGELRQRNVNGGSTEDLAASVVGDDGGIEKDNFSGGIE---KDNCSDGIGKEDCSVKASPVEKPINVSERSVLTKSETVESVEWKRIMAEDPNYVFTVDKSPVAYFLEEMYNGNSLRSTTTLGNEIERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRILMTIWRILKTR 930
            MA R++G KLSFE+L  +   EE E   L   +SD    P                    DS+ +S        + + N    +   +       +GG VVC   +E              A    V G       GELRQRNV                      NF+G +E   ++N S+  G E+   ++ P          SV+TK ET ES++W ++MA+DPNY+F+++KSPV YF++EM  G SLRSTTTLG+E ERE+VYDTIFRLPWRCE LIDVGFFVC DSFLSLLTIMPT+ILM +WR    R
Sbjct:    1 MAWRSSGRKLSFEILNHSSSHEEKEDQYLVNYQSDPVEKPYRKKKKHKRKHKPLHPEIHEDSITHS-------YSVVHNSHHTDNGNIQNSYIVGSGGSVVCSTVSEV------------GAEIQRVYGN------GELRQRNV----------------------NFAGVVETAVEENASEESGVEEKQRRSEP-------PNGSVVTKLETAESLDWNKLMADDPNYLFSMEKSPVKYFMDEMNKGISLRSTTTLGSEKEREKVYDTIFRLPWRCELLIDVGFFVCLDSFLSLLTIMPTKILMILWRFPSAR 260          
BLAST of Ca_07439 vs. TrEMBL
Match: K4C5T6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc06g051430.2 PE=4 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.688e-43
Identity = 129/328 (39.33%), Postives = 166/328 (50.61%), Query Frame = 1
Query:    1 MALRTAGTKLSFEVLRRTPLDEEE------VSLLHRSKSD----LTTLPDXXXXXXXXXXXXXXLLDPVDSVANSDDPHRITEAPLTNGRSCNGFELHAMSYCATGGCVVCEEATEA------SVCAVTSAPEGGSAFPTSVRGGVEGFNFGELRQRNV--NGGSTEDLAASVVGDDGGIEKDNFSGGIEKDNCSDGIGKEDCSVKASPVEKPINVSERSVLTKSETVESVEWKRIMAEDPNYVFTVDKSPVAYFLEEMYNGNSLRSTTTLGNEIERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRILMTIWRILKTR 930
            MALR+ G K+SF++L     D++       +    RS SD    +  + D                    +  ++     +T+  L        F  +  S   +   VVCEE          S C+V+S               V G  FGELRQRNV  NG S E + +  +      E+++ S             KE  S   S VE  +N+   +  +  + V S++WKR+MAEDPN  F VDKSPV  F+EEMY GNSLRST  LGNE ERERVYDTIFRLPWRCE LI+VG FVC DSFLSLLT+MPTR++M  WR LKTR
Sbjct:    1 MALRSTGRKISFDILSTFLSDDDYDYDSSIIPTCLRSNSDPSPQIIPIDDATSPTGIRKKKKKKKKHRRITEHSTISEFSVTDEELDRSFPVGEFNGYCYSVAQSSSVVVCEEPEAMPPPMPHSSCSVSS---------------VTGLPFGELRQRNVMVNGVSEESVGSPQIA-----ERESESV------------KELESRSNSRVEMDLNMDGIAGRSLEKEV-SLDWKRLMAEDPNQTFPVDKSPVKCFMEEMYAGNSLRSTVALGNEKERERVYDTIFRLPWRCELLINVGVFVCLDSFLSLLTVMPTRLIMICWRFLKTR 295          
BLAST of Ca_07439 vs. TrEMBL
Match: R0GDB4_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10019980mg PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.219e-41
Identity = 116/327 (35.47%), Postives = 166/327 (50.76%), Query Frame = 1
Query:    1 MALRTAGTKLSFEVLRRTPLDEEEVSLLH----RSKSDLTTLPDXXXXXXXXXXXXXXLLD--PVDSVANSDDPHRITEAPLTNGRSCNGFELHAM-----SYCATGGCVVCEEATEASVCAVTSAPEGGSAFPTSVRGGV---EGFNFGELRQRNVNGG---STEDLAASVVGDDGGIEKDNFSGGIEKDNCSDGIGKEDCSVKASPVEKPINVSERSVLTKSETVESVEWKRIMAEDPNYVFTVDKSPVAYFLEEMYNGNSLRSTTTLGNEIERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRILMTIWRILKTR 930
            MA+R++G KLSFE+L R+   E + +LL     RS SD  T  D                +   V+++    + H    + +  G SC+  E   M     +Y   G                     GG    T + G      GFNFGELRQRNVNG    S ++  +  V  D  +  D  S  +           E+   +    + P +      + + +T  S++WK+++A+DP+++    +SP+AYF+EE+Y G SLRSTTT GN+IERER+YDTIFRLPWRCE LI+ GFFVC +SFLSL+T+MP R+L+  W   K R
Sbjct:    1 MAIRSSGRKLSFEILSRSSSFENDDTLLQSSIRRSSSDPITRNDAVESPKRKRSKRKKKKNNNKVETILEDGESH----STIVEGSSCDFGETSTMFENRLNYYGGGS--------------------GGGCVVTLLDGQTVHHNGFNFGELRQRNVNGSIDSSNDERWSDTVSSDKKLYMDETSAELSTS--------ENPPFQEVQHQFPRSEINGDAVRRLDTEASLDWKQLVADDPDFLSAETRSPMAYFMEEIYGGISLRSTTTPGNDIERERIYDTIFRLPWRCEVLINTGFFVCVNSFLSLMTVMPIRVLLIFWDTFKKR 295          
BLAST of Ca_07439 vs. TrEMBL
Match: D7KW85_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475928 PE=4 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.734e-40
Identity = 114/318 (35.85%), Postives = 169/318 (53.14%), Query Frame = 1
Query:    1 MALRTAGTKLSFEVLRRTPLDEEEVSLLHRSKSDLTTLPDXXXXXXXXXXXXXXLL-----DPVDSVANSDDPHRITEAPLTNGRSCNGFELHAMSYCATGGCVVCEEATEASVCAVTSAPEGGSAFPTSVRGGVEGFNFGELRQRNVNG---GSTEDLAASVVGDDGGIEKDNFSGGIEKDNCSDGIGKEDCSVKASPVEKPINVSERSVLTKSETVESVEWKRIMAEDPNYVFTVDKSPVAYFLEEMYNGNSLRSTTTLGNEIERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRILMTIWRILKTR 930
            MA+R++G KLSFE+L R+   E + + + RS SD  T  D                     + V+++  + D H  T      G +   FE + ++Y   GG         +  C VT   +G +           GFNFGELRQRNVNG   GS ++  +  +  D  +  +  S  +           E+   +    + P +    +V+ + +T  S++WK+++A+DP+++    +SP+ YF+EE+Y G SLRSTTT GN++ERER+YDTIFRLPWRCE LID GFFVC +SFLSLLT+MP R+L+      K R
Sbjct:    1 MAIRSSGRKLSFEILSRSSSFENDDTSIRRSSSDPITGNDASESLRDYGKRKRSKKKKKNNNKVETILENGDSHS-TIVTGDFGETKTMFE-NRLNYYGGGG------GGSSGGCVVTLL-DGQTVHHN-------GFNFGELRQRNVNGSVDGSNDERWSDTMSSDKKLYMEETSVELSSS--------ENPPFQEVQHQFPRSEVNGNVVRRLDTEASLDWKQLVADDPDFLSAETRSPMKYFMEEIYGGISLRSTTTPGNDVERERIYDTIFRLPWRCEVLIDTGFFVCVNSFLSLLTVMPIRVLLIFMDAFKNR 294          
BLAST of Ca_07439 vs. TrEMBL
Match: M4CJ86_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra004270 PE=4 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.960e-38
Identity = 112/325 (34.46%), Postives = 162/325 (49.85%), Query Frame = 1
Query:    1 MALRTAGTKLSFEVLRRTPLDEEEVSLLHRSKSDLTTLPDXXXXXXXXXXXXXXLL-----DPVDSVANSDDPHRITEAPLTNGRSCNGFEL----HAMSYCATGGCVVCEEATEASVCAVTSAPEGGSAFPTSVRGGVEGFNFGELRQRNVNGGSTEDLAASVVGDDGGIEKDNFSGGIEKDNCSDGIGKEDCSVKASPVEKPINVSERS------VLTKSETVESVEWKRIMAEDPNYVFTVDKSPVAYFLEEMYNGNSLRSTTTLGNEIERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRILMTIWRILKTR 930
            M +R+ G KLSFE+L  + L+++ +  + RS SD  +  D                     + V+++  + DP + T     +  SC+  E     + ++Y   GG                    GGS   T       GF+FG+LRQRNVNG S +        +    EK+N                        P E+  N   RS      V+T+ +T  S++WK++MA+DP+++    +SP+ YF+ E+Y G SLRSTTT GN++ERER+YD IFRLPWRCE L+  GFFVC +SFLSLLT+MP R+L+T W   K R
Sbjct:    1 MTVRSTGRKLSFEIL--SSLEDDSLPPIPRSSSDPISRNDSTESSSPKRRRHRKKKKHNNNNKVETIPENGDP-QFTSVEDPSWASCDEGERSVFENRLNYFGGGG--------------------GGSTVVTQTIQH-NGFSFGKLRQRNVNGSSIDSTNDERFSETMASEKEN-----------------------PPFEEVQNQFPRSETNGNVVVTRLDTESSLDWKQLMADDPDFLSAETRSPMKYFMGEIYGGVSLRSTTTSGNDVERERIYDMIFRLPWRCEVLLHTGFFVCVNSFLSLLTVMPIRVLLTFWGAFKKR 278          
BLAST of Ca_07439 vs. DB:Swiss
Match: POD1_ARATH (Protein POLLEN DEFECTIVE IN GUIDANCE 1 OS=Arabidopsis thaliana OX=3702 GN=POD1 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.656e-46
Identity = 125/327 (38.23%), Postives = 173/327 (52.91%), Query Frame = 1
Query:    1 MALRTAGTKLSFEVLRRTPLDEEEVSLLHRSKSD-----LTTLPDXXXXXXXXXXXXXXLLDPVDSVANSDDPHR--ITEAPLTNGRSCNGFELHAMSYCATGGCVVCEEATEASVCAVTSAPEGGSAFPTSVRGGVEGFNFGELRQRNVNGGSTEDLAASVVGDDGGIEKDNFSGGIEKDNCSDGIGKEDCSVKASPVEKPINVSERSVLTKSE----------TVESVEWKRIMAEDPNYVFTVDKSPVAYFLEEMYNGNSLRSTTTLGNEIERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRILMTIWRILKTR 930
            MA+R++G KLSFE+L +    E + + + RS SD     + +   R   K + SK+KKK ++ V+++  + D H   IT +    G +   FE     Y            +    C VT   +G +           GFNFGELRQRNVNG        SV G +     D  S           +  E+ SV+ SP E P     +    +SE          T  S++WK+++A+DP+++    +SP+ YF+EE+Y G SLRSTTT GN+IERER+YDTIFRLPWRCE LID GFFVC +SFLSLLT+MP R+L+      K R
Sbjct:    1 MAIRSSGRKLSFEILSQNSSFENDDTSIRRSSSDPITGNVASESPRDYGKRKRSKKKKKKVNQVETILENGDSHSTIITGSSGDFGETTTMFENRLNYYGGG------GSGSSGGGCVVT-LLDGQTVHH-------NGFNFGELRQRNVNG--------SVDGSNDERWSDTLSS-------DKKLYMEETSVELSPSENPPFQEVQHQFPRSEINGNVVRRLDTEASLDWKQLVADDPDFLSAETRSPMKYFMEEIYGGISLRSTTTPGNDIERERIYDTIFRLPWRCEVLIDTGFFVCVNSFLSLLTVMPIRVLLIFMDAFKNR 298          
BLAST of Ca_07439 vs. DB:Swiss
Match: TAPT1_DICDI (Protein TAPT1 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0277313 PE=3 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 8.385e-8
Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 1
Query:  703 AYFLEEMYNGNSLRSTTTLGNE----IERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRILMTIWRILKTRFA 936
             Y  +E++ G        L NE    ++RE+VY+ +  +PW  E LI  GF VCFDSFL L T +P R  ++  + L + F+
Sbjct:  390 TYLYDEIHGG-------YLSNEANDTLKREQVYNFV-HVPWELEKLISFGFLVCFDSFLFLFTFLPIRFFLSFLKFLISPFS 463          
The following BLAST results are available for this feature:
BLAST of Ca_07439 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
POD1_ARATH1.007e-4335.76Protein POLLEN DEFECTIVE IN GUIDANCE 1 OS=Arabidop... [more]
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BLAST of Ca_07439 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7J479_MEDTR8.344e-10666.98TAPT1-like protein OS=Medicago truncatula GN=MTR_3... [more]
I1KCA1_SOYBN4.760e-8557.23Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
I1JXD0_SOYBN1.060e-8459.18Uncharacterized protein OS=Glycine max PE=4 SV=2[more]
M5XAV8_PRUPE2.157e-5344.41Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
D7T8I0_VITVI1.108e-4942.86Putative uncharacterized protein OS=Vitis vinifera... [more]
B9HVS7_POPTR3.121e-4439.81Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
K4C5T6_SOLLC7.688e-4339.33Uncharacterized protein OS=Solanum lycopersicum GN... [more]
R0GDB4_9BRAS4.219e-4135.47Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
D7KW85_ARALL2.734e-4035.85Putative uncharacterized protein OS=Arabidopsis ly... [more]
M4CJ86_BRARP1.960e-3834.46Uncharacterized protein OS=Brassica rapa subsp. pe... [more]

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BLAST of Ca_07439 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
POD1_ARATH3.656e-4638.23Protein POLLEN DEFECTIVE IN GUIDANCE 1 OS=Arabidop... [more]
TAPT1_DICDI8.385e-836.59Protein TAPT1 homolog OS=Dictyostelium discoideum ... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008010Membrane protein,Tapt1/CMV receptorPANTHERPTHR13317FAMILY NOT NAMEDcoord: 230..308
score: 1.4
NoneNo IPR availablePANTHERPTHR13317:SF4SUBFAMILY NOT NAMEDcoord: 230..308
score: 1.4
NoneNo IPR availableSEGsegsegcoord: 41..54
score
NoneNo IPR availableSEGsegsegcoord: 27..37
score
NoneNo IPR availableSEGsegsegcoord: 35..52
score: NAcoord: 65..79
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_07439_v1.0_kabuli ID=Ca_07439_v1.0_kabuli; Name=Ca_07439; organism=Cicer arietinum; type=mRNA; length=948bp
ATGGCGTTGAGAACCGCCGGCACAAAACTCTCCTTCGAGGTTCTCCGCCG
AACTCCACTCGATGAAGAAGAAGTCTCTCTTTTACACCGTTCCAAATCCG
ATCTAACAACTCTACCCGATCGCAAGAAGCGCAAAAACCGAGCATCCAAG
AGGAAAAAGAAGCTTCTCGATCCCGTAGATTCCGTCGCTAATTCCGACGA
TCCGCACCGGATTACTGAAGCTCCGCTCACAAACGGACGATCATGTAACG
GTTTCGAGCTCCACGCTATGAGTTACTGCGCTACCGGAGGATGCGTCGTG
TGCGAGGAAGCGACTGAAGCGAGCGTCTGTGCCGTTACTTCGGCGCCTGA
GGGAGGTTCTGCGTTTCCGACGAGCGTGCGTGGTGGCGTAGAAGGGTTTA
ATTTCGGTGAATTGAGGCAGAGGAATGTGAATGGTGGAAGTACTGAGGAT
TTAGCTGCTTCGGTGGTTGGCGATGACGGTGGGATTGAGAAGGACAATTT
TAGCGGTGGGATCGAGAAGGACAATTGTAGCGATGGGATTGGGAAGGAAG
ATTGTAGTGTTAAAGCGAGTCCGGTGGAGAAACCGATAAACGTATCTGAA
AGGAGCGTCCTTACGAAATCGGAAACGGTTGAATCGGTGGAGTGGAAGCG
GATCATGGCAGAAGATCCGAATTATGTGTTCACAGTAGATAAGTCTCCTG
TAGCATACTTCTTGGAGGAAATGTACAATGGAAATTCGTTACGGAGTACT
ACTACTCTTGGCAATGAAATAGAACGAGAGAGAGTTTATGACACTATCTT
CCGCTTGCCATGGAGATGCGAATGGCTTATAGATGTTGGCTTCTTTGTCT
GCTTCGATTCATTTCTTTCATTATTAACTATTATGCCAACGAGGATCTTG
ATGACCATTTGGAGGATTCTTAAGACAAGGTTTGCCTCCTTTACTTAA
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protein sequence of Ca_07439_v1.0_kabuli

>Ca_07439_v1.0_kabuli ID=Ca_07439_v1.0_kabuli; Name=Ca_07439_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=315bp
MALRTAGTKLSFEVLRRTPLDEEEVSLLHRSKSDLTTLPDRKKRKNRASK
RKKKLLDPVDSVANSDDPHRITEAPLTNGRSCNGFELHAMSYCATGGCVV
CEEATEASVCAVTSAPEGGSAFPTSVRGGVEGFNFGELRQRNVNGGSTED
LAASVVGDDGGIEKDNFSGGIEKDNCSDGIGKEDCSVKASPVEKPINVSE
RSVLTKSETVESVEWKRIMAEDPNYVFTVDKSPVAYFLEEMYNGNSLRST
TTLGNEIERERVYDTIFRLPWRCEWLIDVGFFVCFDSFLSLLTIMPTRIL
MTIWRILKTRFASFT
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mRNA from alignment at Ca5:38863659..38865579-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_07439_v1.0_kabuli ID=Ca_07439_v1.0_kabuli; Name=Ca_07439; organism=Cicer arietinum; type=mRNA; length=1921bp; location=Sequence derived from: Ca5:38863659..38865579- (Cicer arietinum
ATGGCGTTGAGAACCGCCGGCACAAAACTCTCCTTCGAGGTTCTCCGCCG AACTCCACTCGATGAAGAAGAAGTCTCTCTTTTACACCGTTCCAAATCCG ATCTAACAACTCTACCCGATCGCAAGAAGCGCAAAAACCGAGCATCCAAG AGGAAAAAGAAGCTTCTCGATCCCGTAGATTCCGTCGCTAATTCCGACGA TCCGCACCGGATTACTGAAGCTCCGCTCACAAACGGACGATCATGTAACG GTTTCGAGCTCCACGCTATGAGTTACTGCGCTACCGGAGGATGCGTCGTG TGCGAGGAAGCGACTGAAGCGAGCGTCTGTGCCGTTACTTCGGCGCCTGA GGGAGGTTCTGCGTTTCCGACGAGCGTGCGTGGTGGCGTAGAAGGGTTTA ATTTCGGTGAATTGAGGCAGAGGAATGTGAATGGTGGAAGTACTGAGGAT TTAGCTGCTTCGGTGGTTGGCGATGACGGTGGGATTGAGAAGGACAATTT TAGCGGTGGGATCGAGAAGGACAATTGTAGCGATGGGATTGGGAAGGAAG ATTGTAGTGTTAAAGCGAGTCCGGTGGAGAAACCGATAAACGTATCTGAA AGGAGCGTCCTTACGAAATCGGAAACGGTTGAATCGGTGGAGTGGAAGCG GATCATGGCAGAAGATCCGAATTGTGAGTTCTTGCTCTGCATGCAACATT GCATTTCGTACTTTTTTGTAGCGATTTATCAGAAACTATCTCCACTGAAT ACATATTATGAAAATTGAACTTATAAATCAATATTTGATCAAACTGTTAT TTGCAATTTGAAGGAAATTAAACTAATCAATTCTTGCTTAGCTTTCAAGA ATTAGCTTCATAAATTTCTAATGGTTCAAAAAATTTTGCATTAATGCTAA TCATGTTCCAAATGCCATTCATTAATTCTATGCTACTTTAATTATGGTAG AGTTCATATTAAATCCAAATTCAATTGTAGTTTGCAAGTCTGGCTTTTCT TTTGCTGTTCTAGTTCATGCCTGCATCCAACTAGCTACTTACCTAGATCT GCAGGTTTTTCTTATATTGCATGTTCTGCTTCAATTTTTATTTTTAATCT ATGCTATGACCAAATTACACAGGCTTGGTGGCATGATAACTGACAGAATA ATGCATGGCAGTGAAAAATAATGTGCGGTTTTGACATGGCTAAAATCCTT TGCCTGTTTTCTTATTACGCTCCTGCTGCTTATTTAGGAATCAATACTAG TAATATATGGTCTCTGACCTCTAGTTTGTTTATGCAAAGCAATTTTTTGT TCAACTCTCTTACTTGTCATTTTATTTTATGCATGCTGTATATGCTTTTT TGGCTTAATTAACCTAGTGGTGATGTGTTTTGATGTCAGATGTGTTCACA GTAGATAAGTCTCCTGTAGCATACTTCTTGGAGGAAATGTACAATGGAAA TTCGTTACGGAGTACTACTACTCTTGGCAATGAAATAGAACGAGAGAGAG TTTATGACACTATCTTCCGCTTGCCATGGAGATGCGAATGGGTACAATTC CTTTTCCCAAATAAAAGGAAACATAAGCAAAAATGATTTCTGGTTCTATT CTTGTTATATCATCAACGGACCTCTTCTCTTTGTTTAGCTTCCTGTGCCT TTCCTCCACAATAATCAAAATAATTTAAAATGTTTAGGGGAAAAGAAGTA AAACTTAAACCTTCCACTTATGCATTATATTTGCATATTTTTATCAATGT ATTCTGAATTTTGTATTTTGGTATCTTAAACATGGAATGCAATTGCAGCT TATAGATGTTGGCTTCTTTGTCTGCTTCGATTCATTTCTTTCATTATTAA CTATTATGCCAACGAGGATCTTGATGACCATTTGGAGGATTCTTAAGACA AGGTTTGCCTCCTTTACTTAA
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Coding sequence (CDS) from alignment at Ca5:38863659..38865579-

>Ca_07439_v1.0_kabuli ID=Ca_07439_v1.0_kabuli; Name=Ca_07439; organism=Cicer arietinum; type=CDS; length=948bp; location=Sequence derived from: Ca5:38863659..38865579- (Cicer arietinum
ATGGCGTTGAGAACCGCCGGCACAAAACTCTCCTTCGAGGTTCTCCGCCG
AACTCCACTCGATGAAGAAGAAGTCTCTCTTTTACACCGTTCCAAATCCG
ATCTAACAACTCTACCCGATCGCAAGAAGCGCAAAAACCGAGCATCCAAG
AGGAAAAAGAAGCTTCTCGATCCCGTAGATTCCGTCGCTAATTCCGACGA
TCCGCACCGGATTACTGAAGCTCCGCTCACAAACGGACGATCATGTAACG
GTTTCGAGCTCCACGCTATGAGTTACTGCGCTACCGGAGGATGCGTCGTG
TGCGAGGAAGCGACTGAAGCGAGCGTCTGTGCCGTTACTTCGGCGCCTGA
GGGAGGTTCTGCGTTTCCGACGAGCGTGCGTGGTGGCGTAGAAGGGTTTA
ATTTCGGTGAATTGAGGCAGAGGAATGTGAATGGTGGAAGTACTGAGGAT
TTAGCTGCTTCGGTGGTTGGCGATGACGGTGGGATTGAGAAGGACAATTT
TAGCGGTGGGATCGAGAAGGACAATTGTAGCGATGGGATTGGGAAGGAAG
ATTGTAGTGTTAAAGCGAGTCCGGTGGAGAAACCGATAAACGTATCTGAA
AGGAGCGTCCTTACGAAATCGGAAACGGTTGAATCGGTGGAGTGGAAGCG
GATCATGGCAGAAGATCCGAATTATGTGTTCACAGTAGATAAGTCTCCTG
TAGCATACTTCTTGGAGGAAATGTACAATGGAAATTCGTTACGGAGTACT
ACTACTCTTGGCAATGAAATAGAACGAGAGAGAGTTTATGACACTATCTT
CCGCTTGCCATGGAGATGCGAATGGCTTATAGATGTTGGCTTCTTTGTCT
GCTTCGATTCATTTCTTTCATTATTAACTATTATGCCAACGAGGATCTTG
ATGACCATTTGGAGGATTCTTAAGACAAGGTTTGCCTCCTTTACTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008010Tatp1