Ca_07443, Ca_07443_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_07443 vs. TrEMBL
Match: I1KCA9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.234e-35 Identity = 92/212 (43.40%), Postives = 127/212 (59.91%), Query Frame = 1 Query: 91 NLVALKRELAELNQGIRSYVYRRGRRVIENWGPPRFFIPNNALEDNISMSGDEKDNYSVYNPTEVDDDSQSTVKCPVCDFDIEVAALRDRSED-GSYEAYSMICPVCDENLGERVMRIVQNASSRKRAWKSEKYSIWSGHAAMDDKKHASWGNNHEPMSGSLLSPAMDNVSAPNSNDFLSDDDTISNASDIPIAKSIAADAPEAPDSVDEQD 723 NL LK EL +N+GI S+V +G+RV WG R+ I ED+ GDE DDD+QS ++CP CDF+I+ ++LR E+ Y+ +M+CPVCDE LGE +R+ QN+S++KRAWKS+K SI SG + + +KK G+ HEP+ LLSP + NVS NS+ + + NA+ I AK DAP+ DS DEQD Sbjct: 21 NLEKLKLELHNINRGIDSHV--QGKRVNGTWGASRYLIGE---EDDTESDGDE------------DDDAQSLLRCPSCDFEIDFSSLRIHLEEMHCYDPKNMLCPVCDETLGEDAIRVAQNSSAQKRAWKSDKSSISSGDSVVLEKKLPDRGSKHEPVPDPLLSPFVRNVSVRNSHGIHPGEGSSRNAAYIFNAKGSRTDAPQ--DSADEQD 213
BLAST of Ca_07443 vs. TrEMBL
Match: Q2HSR8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC151000g14v2 PE=4 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.040e-33 Identity = 92/224 (41.07%), Postives = 132/224 (58.93%), Query Frame = 1 Query: 79 SAFENLVALKRELAELNQGIRSYVYRRGRRVIENWGPPRFFIPNNALEDNISMSGDEKDNYSVYNPTEVDDDSQSTVKCPVCDFDIEVAALRDRSEDGSYEAYSMICPVCDENLGERVMRIVQNASSRKRAWKSEKYSIWSGHAAMD----DKKHASWG-NNHEPMSGSLLSPAMDNVSAPNSNDFLSDDDTISNASDIPIAKSI----AADAPEAPDSVDEQD 723 S F+N ++K +L+++ + +RS R I G + + N D+ S GDEKD SV+NP +D DS +KCP CDFD++V++LRD ED +Y +++MICPVCD+NL E V+R+VQ SSR ++W +++ DK +ASWG H P S S SP+ DNV P+SN+F SD+DT S+ASDI A I ++ E PD+ E D Sbjct: 26 SVFDNFDSMKLKLSDIYERMRSL------RRIRTHGRRKNLVGNEFDADSSSF-GDEKDGTSVFNP--IDLDSPPVIKCPGCDFDVKVSSLRDYLEDPTYNSHTMICPVCDKNLREDVIRMVQ--SSRLPTSPKHIRNLWKDGVSINWELYDKINASWGETKHNPTSDSHFSPSRDNVYVPSSNEFFSDEDTFSDASDITDANDIPIGKSSGGTEVPDTGREDD 238
BLAST of Ca_07443 vs. TrEMBL
Match: G7IFR8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_2g028410 PE=4 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.040e-33 Identity = 92/224 (41.07%), Postives = 132/224 (58.93%), Query Frame = 1 Query: 79 SAFENLVALKRELAELNQGIRSYVYRRGRRVIENWGPPRFFIPNNALEDNISMSGDEKDNYSVYNPTEVDDDSQSTVKCPVCDFDIEVAALRDRSEDGSYEAYSMICPVCDENLGERVMRIVQNASSRKRAWKSEKYSIWSGHAAMD----DKKHASWG-NNHEPMSGSLLSPAMDNVSAPNSNDFLSDDDTISNASDIPIAKSI----AADAPEAPDSVDEQD 723 S F+N ++K +L+++ + +RS R I G + + N D+ S GDEKD SV+NP +D DS +KCP CDFD++V++LRD ED +Y +++MICPVCD+NL E V+R+VQ SSR ++W +++ DK +ASWG H P S S SP+ DNV P+SN+F SD+DT S+ASDI A I ++ E PD+ E D Sbjct: 26 SVFDNFDSMKLKLSDIYERMRSL------RRIRTHGRRKNLVGNEFDADSSSF-GDEKDGTSVFNP--IDLDSPPVIKCPGCDFDVKVSSLRDYLEDPTYNSHTMICPVCDKNLREDVIRMVQ--SSRLPTSPKHIRNLWKDGVSINWELYDKINASWGETKHNPTSDSHFSPSRDNVYVPSSNEFFSDEDTFSDASDITDANDIPIGKSSGGTEVPDTGREDD 238
BLAST of Ca_07443 vs. TrEMBL
Match: Q2HSR9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC151000g13v2 PE=4 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.317e-33 Identity = 96/243 (39.51%), Postives = 134/243 (55.14%), Query Frame = 1 Query: 79 SAFENLVALKRELAELNQGIRSYVYRRGRRVIENWGPPRFFIPNNALEDNISMSGDEKDNYSVYNPTEVDDDSQSTVKCPVCDFDIEVAALRDRSEDGSYEAYSMICPVCDENLGERVMRIVQNA---SSRKRAWKSEKYSIWSGHAAMDDKKHASWG-NNHEPMSGSLLSPAMDNVSAPNSNDFLSDDDTISNASDIPIAKSI----AADAPEAPDSVDEQDXXXXXXXXXXXXXLVMSAMF 783 S F N ++K +L++L Y R I GP + + N + + S SGDEKD SV+NP +D +KCP CDFDI+V++LRD ED +Y + +MICPVCD+NLGE V+R+VQ++ +S K K + + DK +ASWG H P S S SP+ DNV P+SN+F SD+DTIS+ASDI A I ++ E ++ E+D L MSA+F Sbjct: 26 SVFNNFDSMKLKLSDL------YERMMALRKIRTHGPGKK-LDGNKFDADSSSSGDEKDGTSVFNPINLD--FPPVIKCPGCDFDIKVSSLRDYLEDPTYNSDTMICPVCDKNLGEDVIRMVQSSRLPTSPKHIRNRWKDGVSINDWELYDKINASWGETKHNPTSDSHFSPSRDNVYVPSSNEFFSDEDTISDASDISDANDIPIGKSSGGAEVLNTRHEEDVQERSNKAAFAQELFMSALF 259
BLAST of Ca_07443 vs. TrEMBL
Match: G7IFR9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_2g028420 PE=4 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.272e-31 Identity = 86/206 (41.75%), Postives = 119/206 (57.77%), Query Frame = 1 Query: 79 SAFENLVALKRELAELNQGIRSYVYRRGRRVIENWGPPRFFIPNNALEDNISMSGDEKDNYSVYNPTEVDDDSQSTVKCPVCDFDIEVAALRDRSEDGSYEAYSMICPVCDENLGERVMRIVQNASSRKRAWKSEKYSIWSGHAAMD-----DKKHASWG-NNHEPMSGSLLSPAMDNVSAPNSNDFLSDDDTISNASDIPIAKSI 678 S F N ++K +L++L Y R I GP + + N + + S SGDEKD SV+NP +D +KCP CDFDI+V++LRD ED +Y + +MICPVCD+NLGE V+R+VQ++ + W +++ DK +ASWG H P S S SP+ DNV P+SN+F SD+DTIS+ASDI A I Sbjct: 26 SVFNNFDSMKLKLSDL------YERMMALRKIRTHGPGKK-LDGNKFDADSSSSGDEKDGTSVFNPINLD--FPPVIKCPGCDFDIKVSSLRDYLEDPTYNSDTMICPVCDKNLGEDVIRMVQSSRLPTSPKFQHIRNRWKDGVSINDWELYDKINASWGETKHNPTSDSHFSPSRDNVYVPSSNEFFSDEDTISDASDISDANDI 222
BLAST of Ca_07443 vs. TrEMBL
Match: G7J4A6_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g076880 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 6.977e-30 Identity = 99/249 (39.76%), Postives = 137/249 (55.02%), Query Frame = 1 Query: 79 SAFENLVALKRELAELNQGIRSYVYRRGRRVIENWGPPRFFIPNNALEDNISMSGDEKDNYSVYNPTEVDDDSQSTVKCPVCDFDIEVAALRDRSEDGSYEAYSMICPVCDENLGERVMRIVQNAS---SRKRAWK-SEKYSIWSGHAAMDDKKHASWGNN-HEPMSGSLLSPAMDNVSAPNSNDFLSD-DDTISNAS------DIPIAKSIAADAPEAPDSVDEQDXXXXXXXXXXXXXLVMSAMFLE 789 S F+N ++ EL+ +N+ + R + PP + N D+ S+SGDEK++ SV N + D+ + VKCPVCDF+IEV+ DRS D Y+AY+M CPVCDE+LGE +R+VQN S S+K WK +K + + H + KK AS +N HE M S+ +NV + N LSD +DTISNAS D IAKSI DA + D +D Q+ L+MS +FLE Sbjct: 25 SVFDNFTSMNLELSNINEEDMRILRR-----VRITSPPNICMTNEV--DDHSISGDEKEDTSVSNQVDPDEVNLPIVKCPVCDFNIEVST--DRSVD--YDAYNMNCPVCDESLGEDAIRMVQNTSFPISQKWIWKPRKKNGVQNVHWEVHGKKDASREHNKHEQMPDSISPAFRENVYLQSLNYILSDEEDTISNASDDVVANDTSIAKSIGTDATDTRDELDVQE---RRKRATFSQELLMSTLFLE 259
BLAST of Ca_07443 vs. TrEMBL
Match: G7J487_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g076670 PE=4 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.008e-28 Identity = 90/246 (36.59%), Postives = 132/246 (53.66%), Query Frame = 1 Query: 76 FSAFENLVALKRELAELNQGIRSYVYRRGRRVIENWGPPRFFIPNNALEDNISMSGDEKDNYSVYNPTEVDDDSQSTVKCPVCDFDIEVAALRDRSEDGSYEAYSMICPVCDENLGERVMRIVQNAS---SRKRAWKSEKYS--IWSGHAAMDDKKHASWGNNHEPMSGSLLSPAMDNVSAPNSNDFLSDDDTISNASDIPIAKSIA---ADAPEAPDSVDEQDXXXXXXXXXXXXXLVMSAMFLE 789 F F NL +++ + +E+ + ++S R R G FI N D+ S S +EK+ +++NP ++D S S KCP C+FDIEV+AL D SED +Y +Y+MICPVC ENLGE +R +Q++S K WK + S W H D +A P+ DN P+ +DF SD+DTISNASD+P+ K I+ + +APD+ DE L++SA+FL+ Sbjct: 23 FPPFNNLASMEFDPSEIIERLKSIPMIRTRP-----GQEDNFIGNQV--DDKSTSEEEKEGDTIFNPIDLDGYSPSAKKCPKCNFDIEVSALLDCSEDQTYVSYTMICPVCHENLGEEAIRNMQSSSFPAVPKGIWKPWENSNVDWELHDKRDTITNAD-------------VPSQDNAYVPSFDDFFSDEDTISNASDVPVEKGISNGKSFEKDAPDTSDEH-VQERSDRAAFAQELLISALFLD 247
BLAST of Ca_07443 vs. TrEMBL
Match: I3T675_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.245e-28 Identity = 72/178 (40.45%), Postives = 106/178 (59.55%), Query Frame = 1 Query: 253 DNYSVYN-PTEVDDDSQSTVKCPVCDFDIEVAALRDRSED-GSYEAYSMICPVCDENLGERVMRIVQNASSRKRAWKSEKYSIWSGHAAMDDKKHASWGNNHEPMSGSLLSPAMDNVSAPNSNDFLSDDDTISNASDIPIAKSIAADAPEAPDSVDEQDXXXXXXXXXXXXXLVMSAM 780 + +SV++ + DDD+QS +CP CDF+IEV+ LR R ++ ++ + +CPVCDE +GE + I Q+++SRKR + EK SI SG M D K ASWGN H P+S LSP S P+ + +SD+D+IS ASD+ KS+ + ++ D+ DEQD LV S + Sbjct: 27 EKFSVFSYGDDDDDDAQSLFRCPSCDFEIEVSVLRTRLQEVHCFDPKNKVCPVCDEKIGEDAVGIPQHSNSRKRTMRFEKSSISSGDLGMIDHKLASWGNKHYPVSDPPLSPFFSKSSVPSPSSIISDEDSISTASDVSNVKSLGTETLDS-DAGDEQDHEERSQRASFVQDLVFSTL 203
BLAST of Ca_07443 vs. TrEMBL
Match: I1MUI9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.000e-28 Identity = 70/160 (43.75%), Postives = 101/160 (63.12%), Query Frame = 1 Query: 253 DNYSVYNPTEVDDDSQSTVKCPVCDFDIEVAALRDRSEDGSYEAY-SMICPVCDENLGERVMRIVQNASSRKRAWKSEKYSIWSGHAAMDDKKHASWGNNHEPMSGSLLSPAMDNVSAPNSNDFLSDDDTISNAS--DIPIAKSIAADAPEAPDSVDEQD 723 DN SV + T+VD+D + +CP CDF+IEV L E+ A +++CPVC+EN+G+ + ++SSR+ AWK EK SIW G++AM KK A+ GN E ++ LLSP + NV P SN+F D+++ SN DIP AK + DAP+ D D+Q+ Sbjct: 26 DNNSVIHYTDVDNDGRCDFRCPFCDFEIEVPVLCSNFEEEHCSALKNVVCPVCEENIGKDAIMQFTHSSSRRWAWKPEKSSIWPGNSAMLGKKLATRGNKQESITDPLLSPFICNVPFPKSNNFHPDENSRSNNKDIDIPNAKRTSTDAPDKGDEKDQQE 185
BLAST of Ca_07443 vs. TrEMBL
Match: G7J4A4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g076860 PE=4 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.531e-28 Identity = 79/178 (44.38%), Postives = 107/178 (60.11%), Query Frame = 1 Query: 223 DNISMSGDEKDNYSVYNPTEVDDDSQSTVKCPVCDFDIEVAALRDRSEDGSYEAYSMICPVCDENLGERVMRIVQNA---SSRKRAWKSEKYSIWSGHAAMDDKKHASW-GNNHEPMSGSLLSPAMDNVSAPNSNDFLSD-DDTISNASDI------PIAKSIAADAPEAPDSVDEQD 723 D+ S+S DEK++ SV N + D+ + VKC C DIEV+ RDRS D Y+AY+ IC C++ LGE +R+VQN+ S+K W + + H + DKK ASW N HEP+ S+L + DNV P+ ND LSD +DTISNASD+ IAKSI DA + D +D Q+ Sbjct: 37 DDHSISVDEKEDTSVLNQVDPDEVNLLIVKCHACGSDIEVSIGRDRSVD--YDAYNTICLACNKGLGEDAIRMVQNSIFQISQKGIWNPRRNGVSHVHWELHDKKDASWEPNKHEPVPDSILPASRDNVYLPSLNDMLSDEEDTISNASDVVIAEDTSIAKSIGTDAMDTRDELDVQE 212 The following BLAST results are available for this feature:
BLAST of Ca_07443 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_07443 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_07443_v1.0_kabuli ID=Ca_07443_v1.0_kabuli; Name=Ca_07443; organism=Cicer arietinum; type=mRNA; length=792bpback to top protein sequence of Ca_07443_v1.0_kabuli >Ca_07443_v1.0_kabuli ID=Ca_07443_v1.0_kabuli; Name=Ca_07443_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=263bpback to top mRNA from alignment at Ca5:38909618..38912537- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_07443_v1.0_kabuli ID=Ca_07443_v1.0_kabuli; Name=Ca_07443; organism=Cicer arietinum; type=mRNA; length=2920bp; location=Sequence derived from: Ca5:38909618..38912537- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:38909618..38912537- >Ca_07443_v1.0_kabuli ID=Ca_07443_v1.0_kabuli; Name=Ca_07443; organism=Cicer arietinum; type=CDS; length=792bp; location=Sequence derived from: Ca5:38909618..38912537- (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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