Ca_07453, Ca_07453_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_07453
Unique NameCa_07453_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length750
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:39006099..39008978 +Cicer arietinum CDC Frontier genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum CDC Frontier genome v1.02013-01-01
InterProScan analysis for kabuli C. arietinum unigenes2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot2019-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cavuR374Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR376Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR445Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR451Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR495Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0651Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0666Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0025Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0035Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0230Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0388Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0480Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0530Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0768Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0906Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0955Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL040Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL570Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR329Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR348Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR372Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR363Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR378Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR366Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR378Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR379Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
catifR427Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR430Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR396Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR420Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR409Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR410Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR417Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR480Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR358Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR364Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR414Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR172Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL032Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL262Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL561Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL690Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR364Cicer arietinum
cacarR380Cicer arietinum
cacarR418Cicer arietinum
cacarR425Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004501824.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_07453-CDS1Ca_07453-CDS1Cicer arietinumCDS
Ca_07453-CDS2Ca_07453-CDS2Cicer arietinumCDS
Ca_07453-CDS3Ca_07453-CDS3Cicer arietinumCDS
Ca_07453-CDS4Ca_07453-CDS4Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_07453_v1.0_kabuliCa_07453_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_07453 vs. TrEMBL
Match: G7JV00_MEDTR (Transcription factor tau subunit sfc4 OS=Medicago truncatula GN=MTR_4g079390 PE=4 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.661e-48
Identity = 115/255 (45.10%), Postives = 142/255 (55.69%), Query Frame = 1
Query:    1 MEVINQNK-EDNPMAEEGNDNAIDHNEDTCYGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFEFENGINPLDLIGNSDSGLPCYQTIKD-------YVVLCNKKRKPLEQCHREGTSSKKAREEDIAEVSSAEMTEIELMNFDQCXXXXXXXXXXXXXXXXXXXXLDERLSRMLGDANLHYANRRYDMAITVLHEVVRLKPTLPESYHILGLVHNAIGDYKKGMSFYKIAARLTPKDSSLWKMLFAW 741
            MEVINQ + ED+P A E +DNA+D    T YG                                   + F F  G+NPLD + N+DS +  YQ ++D       Y  L N+KRKP +Q HRE TSSKKARE+DI+ V  A++ E ELMN                        LDE++S+M GDA +HY +RRYDMAI VLHEVVRL+P LP+ YHILG VH AIGD++  M FY I A LTPKDSSLW+ LF W
Sbjct:    1 MEVINQKEDEDHPRAIEDSDNAVDTEYGTLYGA---------EENGEEENALENEEEEEGESDTVDEDQFRFCGGVNPLDFVRNNDSSVQLYQKLEDYHQKSIQYRALDNRKRKPPQQPHREETSSKKAREDDISGVGLADIEE-ELMNLGHGKRSKKKRSKKRGRQKGSKKKLDEKISQMFGDALMHYTSRRYDMAIDVLHEVVRLEPNLPDPYHILGAVHGAIGDHENEMGFYMIYAHLTPKDSSLWERLFVW 245          
BLAST of Ca_07453 vs. TrEMBL
Match: G7JNI9_MEDTR (Transcription factor tau subunit sfc4 OS=Medicago truncatula GN=MTR_4g074860 PE=4 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 9.002e-45
Identity = 115/255 (45.10%), Postives = 142/255 (55.69%), Query Frame = 1
Query:    1 MEVINQNKE-DNPMAEEGNDNAIDHNEDTCYGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFEFENGINPLDLIGNSDSGLPCYQTIKDYV-------VLCNKKRKPLEQCHREGTSSKKAREEDIAEVSSAEMTEIELMNFDQCXXXXXXXXXXXXXXXXXXXXLDERLSRMLGDANLHYANRRYDMAITVLHEVVRLKPTLPESYHILGLVHNAIGDYKKGMSFYKIAARLTPKDSSLWKMLFAW 741
            ME INQ +E D+P A E +DNA   NEDT YGV                                  + F F  G+NPLD + N+DSG+  YQ  KDY         L N+KRK   Q HRE TSSKKA E+DI  V+ AE+ E   +NF +                     LDE++S+MLGDA++HYAN R+ MAI+VLHEVVRL+P LP+SYH LGLVH AIGD++  M FY I A LTPKD +LWK L+ W
Sbjct:    1 MEEINQKEEEDHPRAVEDSDNA---NEDTQYGVEETGEEEEDASENEEEEEEEENDTVDED------DQFIFGAGVNPLDFVRNNDSGVNLYQKFKDYHQKSIEYRALDNRKRKLPLQPHREETSSKKAGEDDIFGVNPAEVEEF--INFGEGKRPRKKRSKKRGRQKGSKKKLDEKISQMLGDAHVHYANGRHKMAISVLHEVVRLEPNLPDSYHTLGLVHGAIGDHENEMGFYMITAHLTPKDPTLWKTLYVW 244          
BLAST of Ca_07453 vs. TrEMBL
Match: G7JNI2_MEDTR (Transcription factor tau subunit sfc4 OS=Medicago truncatula GN=MTR_4g074720 PE=4 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 9.002e-45
Identity = 115/255 (45.10%), Postives = 142/255 (55.69%), Query Frame = 1
Query:    1 MEVINQNKE-DNPMAEEGNDNAIDHNEDTCYGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFEFENGINPLDLIGNSDSGLPCYQTIKDYV-------VLCNKKRKPLEQCHREGTSSKKAREEDIAEVSSAEMTEIELMNFDQCXXXXXXXXXXXXXXXXXXXXLDERLSRMLGDANLHYANRRYDMAITVLHEVVRLKPTLPESYHILGLVHNAIGDYKKGMSFYKIAARLTPKDSSLWKMLFAW 741
            ME INQ +E D+P A E +DNA   NEDT YGV                                  + F F  G+NPLD + N+DSG+  YQ  KDY         L N+KRK   Q HRE TSSKKA E+DI  V+ AE+ E   +NF +                     LDE++S+MLGDA++HYAN R+ MAI+VLHEVVRL+P LP+SYH LGLVH AIGD++  M FY I A LTPKD +LWK L+ W
Sbjct:    1 MEEINQKEEEDHPRAVEDSDNA---NEDTQYGVEETGEEEEDASENEEEEEEEENDTVDED------DQFIFGAGVNPLDFVRNNDSGVNLYQKFKDYHQKSIEYRALDNRKRKLPLQPHREETSSKKAGEDDIFGVNPAEVEEF--INFGEGKRPRKKRSKKRGRQKGSKKKLDEKISQMLGDAHVHYANGRHKMAISVLHEVVRLEPNLPDSYHTLGLVHGAIGDHENEMGFYMITAHLTPKDPTLWKTLYVW 244          
BLAST of Ca_07453 vs. TrEMBL
Match: G7JNH9_MEDTR (General transcription factor 3C polypeptide OS=Medicago truncatula GN=MTR_4g074690 PE=4 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.421e-44
Identity = 112/257 (43.58%), Postives = 143/257 (55.64%), Query Frame = 1
Query:    1 MEVINQNKED-NPMAEEGNDNAIDHNEDTCYGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFEFENGINPLDLIGNSDSGLPCYQTIKDYV-------VLCNKKRKPLEQCHREGTSSKKAREEDIAEVSSAEMTEIELMNFDQCXXXXXXXXXXXXXXXXXXXXLDERLSRMLGDANLHYANRRYDMAITVLHEVVRLKPTLPESYHILGLVHNAIGDYKKGMSFYKIAARLTPKDSSLWKMLFAWYM 747
            ME INQ +E+ +P   E ++NA   N+DT YGV                                  + F F +G+NPLD + N+DS +  YQ  KDY         L N+KRK   Q HRE TSSKKARE+D+  V SAE+ E   +NF +                     LDE++S+MLGDA +HYAN R++MAI+VLHEVVRL+P LP+SYH LGLVH AIGD++  M FY I A LTPKD +LWK L+ W M
Sbjct:   17 MEEINQKEEEYHPRVTEDSNNA---NDDTRYGVEENGEEEEEASENED-------------------DQFIFGDGVNPLDFVRNNDSDVRLYQKFKDYHQKSIEYRALDNRKRKLPLQSHREETSSKKAREDDVFGVISAEVEEF--INFGEGKRSRKKRSNKRGRQKGSKKELDEKISQMLGDAYIHYANGRHEMAISVLHEVVRLEPNLPDSYHTLGLVHGAIGDHENEMGFYMITAHLTPKDPTLWKTLYVWSM 249          
BLAST of Ca_07453 vs. TrEMBL
Match: A5AND8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020389 PE=4 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.348e-32
Identity = 83/179 (46.37%), Postives = 107/179 (59.78%), Query Frame = 1
Query:  211 FENGINPLDLIGNSDSGLPCYQTIK--DYVVLCNKKRKPLEQCHREGTSSKKAREEDIAEVSSAEMTEIELMNFDQCXXXXXXXXXXXXXXXXXXXXLDERLSRMLGDANLHYANRRYDMAITVLHEVVRLKPTLPESYHILGLVHNAIGDYKKGMSFYKIAARLTPKDSSLWKMLFAW 741
            FE+G+NPLD   N  SGL  Y+  +  +Y  L  KKRK L QC  EG + KKAR ED ++    E+  +E MN  +                     L   ++R LG+ANLHYA+ RY+ AI VL EVVRL P LP++YH  GLV+NA GD K+ ++FY +AA LTPKDSSLWK+L  W
Sbjct:   37 FEDGMNPLDFTENDASGLQPYEQFERLEYEALAEKKRKALSQCQFEGLA-KKARHEDDSQAIFDEI--METMNHRR--RRKSRKRKKSGRRKGLKNKLSPEVTRKLGEANLHYAHGRYEEAILVLKEVVRLAPNLPDAYHTFGLVYNAFGDKKRALNFYMLAAHLTPKDSSLWKLLVTW 210          
BLAST of Ca_07453 vs. TrEMBL
Match: K7LNY4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 7.399e-31
Identity = 80/182 (43.96%), Postives = 104/182 (57.14%), Query Frame = 1
Query:  205 FEFENGINPLDLIG-NSDSGLPCYQTIK--DYVVLCNKKRKPLEQCHREGTSSKKAREEDIAEVSSAEMTEIELMNFDQCXXXXXXXXXXXXXXXXXXXXLDERLSRMLGDANLHYANRRYDMAITVLHEVVRLKPTLPESYHILGLVHNAIGDYKKGMSFYKIAARLTPKDSSLWKMLFAW 741
            F F+NG+NPLD +  N DSG+  YQ     +   L +KKRK +EQCH E   SK ARE D++    AE+  +E M++                        D +L++MLGDA  HYA   YD A  VL EV+RL P L ESYH LGLV+ ++ DYK+ M+ Y IAA L  K+SSLWK +F W
Sbjct:   41 FRFKNGMNPLDFVDDNDDSGIQPYQRFVRLEREALADKKRKAIEQCHSEEPPSKMAREGDVSGAKIAEI--MEAMDYYGVRKRSRKPKKRGRRKGSKNKD-DPKLTQMLGDATFHYARGDYDQAKAVLREVIRLAPNLHESYHTLGLVYTSLQDYKRAMALYLIAAHLDAKESSLWKTIFTW 219          
BLAST of Ca_07453 vs. TrEMBL
Match: F6H9S2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0085g01060 PE=4 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.648e-30
Identity = 80/175 (45.71%), Postives = 103/175 (58.86%), Query Frame = 1
Query:  223 INPLDLIGNSDSGLPCYQTIK--DYVVLCNKKRKPLEQCHREGTSSKKAREEDIAEVSSAEMTEIELMNFDQCXXXXXXXXXXXXXXXXXXXXLDERLSRMLGDANLHYANRRYDMAITVLHEVVRLKPTLPESYHILGLVHNAIGDYKKGMSFYKIAARLTPKDSSLWKMLFAW 741
            +NPLD   N  SGL  Y+  +  +Y  L  KKRK L QC  EG + KKAR ED ++    E+  +E MN  +                     L   ++R LG+ANLHYA+ RY+ AI VL EVVRL P LP++YH  GLV+NA GD K+ ++FY +AA LTPKDSSLWK+L  W
Sbjct:    1 MNPLDFTENDASGLQPYEQFERLEYEALAEKKRKALSQCQFEGLA-KKARHEDDSQAIFDEI--METMNHRR--RRKSRKRKKSGRRKGLKNKLSPEVTRKLGEANLHYAHGRYEEAILVLKEVVRLAPNLPDAYHTFGLVYNAFGDKKRALNFYMLAAHLTPKDSSLWKLLVTW 170          
BLAST of Ca_07453 vs. TrEMBL
Match: K7LSR3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.925e-29
Identity = 79/182 (43.41%), Postives = 102/182 (56.04%), Query Frame = 1
Query:  205 FEFENGINPLDLIG-NSDSGLPCYQTIK--DYVVLCNKKRKPLEQCHREGTSSKKAREEDIAEVSSAEMTEIELMNFDQCXXXXXXXXXXXXXXXXXXXXLDERLSRMLGDANLHYANRRYDMAITVLHEVVRLKPTLPESYHILGLVHNAIGDYKKGMSFYKIAARLTPKDSSLWKMLFAW 741
            F F+ G+NPLD +  N DSG+  YQ     +   L +KKRK  EQCH E   SK ARE DI+    AE+  +E M++                       +D +L++M GDA  HYA   YD A  VL EV+RL P L ESYH LGLV+ ++ DYK+ M+ Y IAA L PK+S LWK +F W
Sbjct:   45 FRFKTGMNPLDFVDDNDDSGIQPYQRFVRLEREALADKKRKAPEQCHSEEPPSKMAREGDISGAKIAEI--MEAMDY-YGMRKRSRKPKKRGRRKGSKNRVDPKLTQMQGDATFHYACGDYDRAKAVLCEVIRLAPNLHESYHTLGLVYTSLQDYKRAMALYLIAAHLDPKESPLWKTIFTW 223          
BLAST of Ca_07453 vs. TrEMBL
Match: B9NE90_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_594398 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.925e-29
Identity = 73/154 (47.40%), Postives = 94/154 (61.04%), Query Frame = 1
Query:  286 DYVVLCNKKRKPLEQCHREGTSSKKAREEDIAEVSSAEMTEIELMNFDQCXXXXXXXXXXXXXXXXXXXXLDERLSRMLGDANLHYANRRYDMAITVLHEVVRLKPTLPESYHILGLVHNAIGDYKKGMSFYKIAARLTPKDSSLWKMLFAWYM 747
            +Y  L  KKRK L     EG S+KKAR+ED+   S AE+ EI  MNF                       L   ++RMLGDA LHYA+  Y+ A+TVL EVV+  P + +SYH LGLVH A+G+ +K M FY+IAA L PKDSSLWK+LF+W++
Sbjct:   70 EYEALAEKKRKTLADAKGEG-SAKKARQEDMTGASLAEIEEI--MNFGMRKKRRRRMPKRRGRRKGSKNKLSPEITRMLGDATLHYAHGNYEEALTVLSEVVKRAPLVADSYHTLGLVHKALGNTEKAMKFYRIAAFLRPKDSSLWKLLFSWHV 220          
BLAST of Ca_07453 vs. TrEMBL
Match: B9N5W7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_582731 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 6.925e-29
Identity = 73/154 (47.40%), Postives = 94/154 (61.04%), Query Frame = 1
Query:  286 DYVVLCNKKRKPLEQCHREGTSSKKAREEDIAEVSSAEMTEIELMNFDQCXXXXXXXXXXXXXXXXXXXXLDERLSRMLGDANLHYANRRYDMAITVLHEVVRLKPTLPESYHILGLVHNAIGDYKKGMSFYKIAARLTPKDSSLWKMLFAWYM 747
            +Y  L  KKRK L     EG S+KKAR+ED+   S AE+ EI  MNF                       L   ++RMLGDA LHYA+  Y+ A+TVL EVV+  P + +SYH LGLVH A+G+ +K M FY+IAA L PKDSSLWK+LF+W++
Sbjct:   72 EYEALAEKKRKTLADAKGEG-SAKKARQEDMTGASLAEIEEI--MNFGMRKKRRRRMPKRRGRRKGSKNKLSPEITRMLGDATLHYAHGNYEEALTVLSEVVKRAPLVADSYHTLGLVHKALGNTEKAMKFYRIAAFLRPKDSSLWKLLFSWHV 222          
The following BLAST results are available for this feature:
BLAST of Ca_07453 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7JV00_MEDTR6.661e-4845.10Transcription factor tau subunit sfc4 OS=Medicago ... [more]
G7JNI9_MEDTR9.002e-4545.10Transcription factor tau subunit sfc4 OS=Medicago ... [more]
G7JNI2_MEDTR9.002e-4545.10Transcription factor tau subunit sfc4 OS=Medicago ... [more]
G7JNH9_MEDTR3.421e-4443.58General transcription factor 3C polypeptide OS=Med... [more]
A5AND8_VITVI1.348e-3246.37Putative uncharacterized protein OS=Vitis vinifera... [more]
K7LNY4_SOYBN7.399e-3143.96Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
F6H9S2_VITVI1.648e-3045.71Putative uncharacterized protein OS=Vitis vinifera... [more]
K7LSR3_SOYBN6.925e-2943.41Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
B9NE90_POPTR6.925e-2947.40Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9N5W7_POPTR6.925e-2947.40Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]

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BLAST of Ca_07453 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helicalGENE3D1.25.40.10no descriptioncoord: 172..245
score: 4.2
IPR013026Tetratricopeptide repeat-containing domainPROFILEPS50293TPR_REGIONcoord: 170..237
score: 14
IPR019734Tetratricopeptide repeatSMARTSM00028Tetratricopeptide repeatscoord: 170..203
score: 50coord: 204..237
score:
IPR019734Tetratricopeptide repeatPROFILEPS50005TPRcoord: 170..203
score: 6.136coord: 204..237
score: 9
NoneNo IPR availableCOILcoilcoiled-coilcoord: 32..67
score
NoneNo IPR availableSEGsegsegcoord: 33..66
score: NAcoord: 146..165
score
NoneNo IPR availableSUPERFAMILY48452TPR-likecoord: 177..249
score: 3.1
NoneNo IPR availableCOILcoilcoiled-coilcoord: 34..66
score
NoneNo IPR availableSEGsegsegcoord: 42..58
score
NoneNo IPR availableSEGsegsegcoord: 12..39
score
NoneNo IPR availableSEGsegsegcoord: 18..58
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_07453_v1.0_kabuli ID=Ca_07453_v1.0_kabuli; Name=Ca_07453; organism=Cicer arietinum; type=mRNA; length=750bp
ATGGAAGTGATTAACCAGAATAAGGAGGATAATCCGATGGCAGAAGAGGG
CAATGACAATGCCATTGATCACAACGAAGACACATGCTATGGTGTGGAAG
ATGAGCGAGAAGAACAAAATTCATCAGAGAATGAAGGAGAAGAAGAAGAA
GAAGAAGAAAAAGAAGAAGAAGCAGAAGAAGAAGATACAGAGTGTGAGAA
TCCGTTCGAGTTCGAAAACGGGATTAATCCTTTGGACTTAATAGGTAACA
GTGATTCCGGTCTTCCGTGCTACCAGACAATTAAAGATTACGTGGTTCTC
TGTAACAAAAAGCGAAAACCACTCGAACAATGTCACCGTGAAGGAACTTC
TTCTAAGAAGGCAAGAGAAGAAGATATTGCCGAGGTAAGCTCAGCTGAGA
TGACGGAAATTGAATTAATGAATTTTGATCAGTGCGGGAGATCAAAAAAG
AAGGTGCCTAGAAAAAGAGGTAGGCGAAAAGGATCAAAGAAGAAACTTGA
CGAAAGGCTGTCACGAATGTTGGGCGATGCCAACCTTCACTATGCAAATC
GTCGTTATGACATGGCTATAACTGTGTTGCATGAAGTTGTCAGGCTGAAG
CCAACTTTACCCGAGTCATATCACATCCTTGGACTTGTCCATAATGCAAT
CGGGGATTATAAAAAAGGAATGAGTTTTTACAAGATTGCTGCTCGTTTGA
CTCCAAAGGATTCATCGCTTTGGAAAATGCTCTTTGCATGGTACATGTAA
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protein sequence of Ca_07453_v1.0_kabuli

>Ca_07453_v1.0_kabuli ID=Ca_07453_v1.0_kabuli; Name=Ca_07453_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=249bp
MEVINQNKEDNPMAEEGNDNAIDHNEDTCYGVEDEREEQNSSENEGEEEE
EEEKEEEAEEEDTECENPFEFENGINPLDLIGNSDSGLPCYQTIKDYVVL
CNKKRKPLEQCHREGTSSKKAREEDIAEVSSAEMTEIELMNFDQCGRSKK
KVPRKRGRRKGSKKKLDERLSRMLGDANLHYANRRYDMAITVLHEVVRLK
PTLPESYHILGLVHNAIGDYKKGMSFYKIAARLTPKDSSLWKMLFAWYM
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mRNA from alignment at Ca5:39006099..39008978+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_07453_v1.0_kabuli ID=Ca_07453_v1.0_kabuli; Name=Ca_07453; organism=Cicer arietinum; type=mRNA; length=2880bp; location=Sequence derived from: Ca5:39006099..39008978+ (Cicer arietinum
ATGGAAGTGATTAACCAGAATAAGGAGGATAATCCGATGGCAGAAGAGGG CAATGACAATGCCATTGATCACAACGAAGACACATGCTATGGTGTGGAAG ATGAGCGAGAAGAACAAAATTCATCAGAGAATGAAGGAGAAGAAGAAGAA GAAGAAGAAAAAGAAGAAGAAGCAGAAGAAGAAGATACAGAGTGTGAGAA TCCGTTCGAGTTCGAAAACGGGATTAATCCTTTGGACTTAATAGGTAACA GTGATTCCGGTCTTCCGTGCTACCAGACAATTAAAGATTACGTGGTTCTC TGTAACAAAAAGCGAAAACCACTCGAACAATGTCACCGGTAACTAACTTC ATCTTATTTAATTTGTCTAGGTTTTGAAATTTCAATTCAATCCATAATAC CTACGTGTTATTTACTTCCATATAATTTCTCTGTTATAATTTAACAATTT AGCTTCGTATATTTTTGTCCTCTCAACTTCAAAATATTTTTGTCCACTCA CATTTAATCTATGCTTTAAACTATGTATTCAGTTAATCAGTGGTTGATTA GTTACTACTGTGTATGTGCAACTGTGAATGCTGTAACCAACAATGTGAGT GTTCAATATATTAGCAATTATAACGAATAAGCTTCTTAGTGGTAAAAGTT TGTTTATTTTTCTAATTGAAAAAAGAAAATATAAAGACTAGAAGTTTAAT TAAAACTATGGCACATTAAGATATCTTCAAAACAGAAAACCTAGATCCTA CCAGTAATAGAGTATAGCTCAAGCTAGCTCAGCGCATGGCACAAGCTAGC TCAGCGTATGGCACAAGCTAAGCCCAAAAAGGCTTCTATCTGTAACAGAA AGTGCTGCGTCAGCACCTAGCCAACAGCCCGTGTAGCTAACTGACCTTGA GGCAGTTAGTCTCCTCTAGTATAAATACCAGAGTTATTAAATGTAAATGA AAATCAAGAATTCATCCGTTCAATACAGAGAATATGGAGAACCGGTTTTC CTTCAGTTTCTCTCTCTTTCTCTCATGATTTCTCTCACTTTTAGTTTCGA TTAACTAGGAACACGAAATAAAAGTTCAATGAGCTACTAAGACGAGTCTT TATTTTGAGTTCAGACACCATGAGTGTTGAATGGAACGATTATACGTGTT TTGCATGAATGAGAACCAAATAAATTGCTGCTATGTTTGACACATTTTAT ATTGAATGTCTCTAAACACAGTGAAGGAACTTCTTCTAAGAAGGCAAGAG AAGAAGATATTGCCGAGGTAAGCTCAGCTGAGATGACGGAAATTGAATTA ATGAATTTTGATCAGTGCGGGAGATCAAAAAAGGTATGATACTAATACTA AGATGTACATATGTTCAGTAACAATTGTGCAACATCTTGATAAGAATTTC TCCATCATATGTTATTCTTGCATTCATTAATTCCTTAAAGAAAGGTAGAT TACAAGTTTTAGACTCTAGCAATGGAAAGCATAGCTGACTAATACATTTG GTATTATGATTTTGGAAGAAAATTTATACACGCTCCTGCCAATCACTTTT ATCCACTCATAGATTTTTCTAGTGAGTTTCCATTTTTTACACGGCGTGTA ACTTTGCTGCAATTTTTATTTATATGTTTTCTTATTCCTTGTTTTCATTA ATATTCTGTTTTATGGATGAGAGATTTTTACTAATTTACTTTTACACCTC TTTCTTTTTAAGCTCTTGGTCATATATATTTTCTCATGCATATTTTGCCC TTGAAAGGATTTATATGAAACTCTAAAAATGTTGAGCACTCTCAATTATG TGTTATGTATTTATTTGATTTAGCATAACTTGCATGACACTTTTTTCAAT ATTGTTTATATTCTAGAAGGTGCCTAGAAAAAGAGGTAGGCGAAAAGGAT CAAAGAAGAAACTTGACGAAAGGCTGTCACGAATGTTGGGCGATGCCAAC CTTCACTATGCAAATCGTCGTTATGACATGGTACATTATTCTGTTACGTA GTGAACTATAGGCTTTGGCATTAGACTTGTTCAAATAGTACTTAAATCCA AGTTCATCAAATCAAATTGATTACATATTCACACTAAACCACTTTTGATC TGGCTGCAAAACGGTGTTTAACTTTTCAAAGAGACAAAGTTGCCTCCAAA CCACACATAGCTACAAGTTGTGTTCCTATCTACTAAAAGTCCCACATTGA ATCTGATATGCCTTGAAAAAATGTTTATATATGAGGCATCTCTCTCTTTA CAAGTCTATTTTGTGGGGTTGAATTAGCGCAACACAAATTGTAAGATGGT CTGAGAATCCATCCAAAAATTGTTGGGCCACTGTTATGGGATCCCTCAAG TCATGCTCCAGAGTCTAGATGTCTAGTCCAGGGCATGGTGAAGTTTGTTG AAAGTCCCGTGTTAGATGTGAAATGGTCTTAAAAAGTGTTTTTAAGTGGG AGTCATCTCTCACAAGGTTTGAGTTAGGAACAACCCAAGGTCTAAGAGTA TCCATTTTTAGTTGACTCAACTTTCATAATAAAAAGGGGAATTGTTAATG TTAGATTGCATTAGAGCTTGAAGTTAAATTTTACTGATTCTACACAGTTT CTGTTTTGTTTAAGCGTGATATATATTATAGGCATTAGTACTATGTTAGC TTTTTGCTAATTAGTTATTCATTGCTATGTTGACTTTTTTGCAGGCTATA ACTGTGTTGCATGAAGTTGTCAGGCTGAAGCCAACTTTACCCGAGTCATA TCACATCCTTGGACTTGTCCATAATGCAATCGGGGATTATAAAAAAGGAA TGAGTTTTTACAAGATTGCTGCTCGTTTGACTCCAAAGGATTCATCGCTT TGGAAAATGCTCTTTGCATGGTACATGTAA
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Coding sequence (CDS) from alignment at Ca5:39006099..39008978+

>Ca_07453_v1.0_kabuli ID=Ca_07453_v1.0_kabuli; Name=Ca_07453; organism=Cicer arietinum; type=CDS; length=750bp; location=Sequence derived from: Ca5:39006099..39008978+ (Cicer arietinum
ATGGAAGTGATTAACCAGAATAAGGAGGATAATCCGATGGCAGAAGAGGG
CAATGACAATGCCATTGATCACAACGAAGACACATGCTATGGTGTGGAAG
ATGAGCGAGAAGAACAAAATTCATCAGAGAATGAAGGAGAAGAAGAAGAA
GAAGAAGAAAAAGAAGAAGAAGCAGAAGAAGAAGATACAGAGTGTGAGAA
TCCGTTCGAGTTCGAAAACGGGATTAATCCTTTGGACTTAATAGGTAACA
GTGATTCCGGTCTTCCGTGCTACCAGACAATTAAAGATTACGTGGTTCTC
TGTAACAAAAAGCGAAAACCACTCGAACAATGTCACCGTGAAGGAACTTC
TTCTAAGAAGGCAAGAGAAGAAGATATTGCCGAGGTAAGCTCAGCTGAGA
TGACGGAAATTGAATTAATGAATTTTGATCAGTGCGGGAGATCAAAAAAG
AAGGTGCCTAGAAAAAGAGGTAGGCGAAAAGGATCAAAGAAGAAACTTGA
CGAAAGGCTGTCACGAATGTTGGGCGATGCCAACCTTCACTATGCAAATC
GTCGTTATGACATGGCTATAACTGTGTTGCATGAAGTTGTCAGGCTGAAG
CCAACTTTACCCGAGTCATATCACATCCTTGGACTTGTCCATAATGCAAT
CGGGGATTATAAAAAAGGAATGAGTTTTTACAAGATTGCTGCTCGTTTGA
CTCCAAAGGATTCATCGCTTTGGAAAATGCTCTTTGCATGGTACATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom
IPR019734TPR_repeat
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005515protein binding