Ca_11311, Ca_11311_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_11311
Unique NameCa_11311_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length729
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca5chromosomeCa5:42969085..42970157 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR406Pisum sativum Cameor genome v1aPisum sativum
capsR418Pisum sativum Cameor genome v1aPisum sativum
capsR437Pisum sativum Cameor genome v1aPisum sativum
cavuR363Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR377Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR426Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR437Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR456Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0552Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0581Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0233Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0340Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0384Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0755Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL056Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL505Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR372Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR393Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR376Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR378Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR377Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR379Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR398Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR462Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR417Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR470Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR346Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR365Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR178Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR189Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL272Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL486Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR380Cicer arietinum
cacarR404Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Va03G084850.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan03g312500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr01.2296Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun01g243900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014637562.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.001G258200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_019918Cajanus cajan Asha genome v1.0Cajanus cajan
Psat05G0282300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat5g093880.1Pisum sativum Cameor genome v1aPisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004502279.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_11311-CDS1Ca_11311-CDS1Cicer arietinumCDS
Ca_11311-CDS2Ca_11311-CDS2Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_11311_v1.0_kabuliCa_11311_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_11311 vs. SwissProt
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.890e-17
Identity = 60/201 (29.85%), Postives = 90/201 (44.78%), Query Frame = 1 
Query:   94 LQKVKPLRAMTGDARE---KLNHVSRDINNTNHQSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPK 687
            L+ V+      GD ++   +++ V++D   T  + +P+R ++  +P GL D +   R+++           D             +P    GG   R   PWEIK+ E E +MRFDMPG+             +++                  +E G  D W  KSY  Y  R+ LP N E E +KAE+KDGVLYI IPK
Sbjct:   44 LRNVRAQAGGDGDNKDNSVEVHRVNKDDQGTAVERKPRRSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFEDAIT----------IPGRNIGGGEIR--VPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHR-------------EENGGEDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPK 219
[Close]
BLAST of Ca_11311 vs. SwissProt
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.949e-16
Identity = 56/186 (30.11%), Postives = 82/186 (44.09%), Query Frame = 1 
Query:  130 DAREKLNHVSRDINNTNHQSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPK 687
            D   ++ HVS+    T  + +P+R  +  +P G+ D +   R+++           D              P    GG   R   PW+IK+ E E +MRFDMPG+             MLV+                 +E G  D W S++Y  Y  R+ LP N E + +KAE+K+GVLYI IPK
Sbjct:    6 DNSVEVQHVSKGDQGTAVEKKPRRTAMDISPFGILDPWSPMRSMRQILDTMDRVFEDTMTF----------PGRNIGGGEIRA--PWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDD-MLVIKGGHKSE----------QEHGGDDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPK 168
[Close]
BLAST of Ca_11311 vs. SwissProt
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.216e-13
Identity = 56/184 (30.43%), Postives = 82/184 (44.57%), Query Frame = 1 
Query:  151 HVSRDINNTNHQS-----QPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPK 687
            HVS +    N+Q      +P+R  +  +P GL D     RT++           D     T+ +P S   + G G  R     PW+IK+ E E KMRFDMPG+             +++                  KEE   D+   ++Y  Y  R+ LP NV+ + +KAE+K+GVL I IPK
Sbjct:   69 HVSNNNQGGNNQGSAVERRPRRMALDVSPFGLLDPMSPMRTMRQMMDTMDRLFED-----TMTFPGSR--NRGTGEIR----APWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHK-------------KEESGKDDSWGRNYSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPK 228
[Close]
BLAST of Ca_11311 vs. SwissProt
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.030e-12
Identity = 59/199 (29.65%), Postives = 82/199 (41.21%), Query Frame = 1 
Query:  109 PLRAMTGDAREKLNHVSRDINNTNHQS-----QPKRR-TVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPK 687
            P R    D RE    V +      +Q      +P++R T+  +P GL D     RT++           D   +S          + G  G     R PW+IKE E E KMRFDMPG+             +++                  K+E   D W  +S   Y  R+ LP N E + IKAE+K+GVL+I IPK
Sbjct:   39 PSRIRAQDQRENSIDVVQQGQQKGNQGSSVEKRPQQRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFEDTMPVSGR--------NRGGSGVSEI-RAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQ--------------KKEDSDDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPK 214
[Close]
BLAST of Ca_11311 vs. SwissProt
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.379e-11
Identity = 61/195 (31.28%), Postives = 87/195 (44.62%), Query Frame = 1 
Query:  124 TGDAREK---LNHVSRDINN---TNHQSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEG-DVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPK 687
            TGD ++    ++H S    N   T  + +P R  +  +P G+ D     RT++           D     T+ +P     S G G  R    TPW+I + E E KMRFDMPG+             MLV+                 +E+G D   W  ++Y  Y  R+ LP NV  + IKAE+K+GVL+I IPK
Sbjct:   51 TGDNKDTSVDVHHSSAQGGNNQGTAVERRPTRMALDVSPFGVLDPMSPMRTMRQMIDTMDRLFED-----TMTFPGRNRAS-GTGEIR----TPWDIHDDENEIKMRFDMPGLSKEDVKVSVEND-MLVIKGEHKK-----------EEDGRDKHSW-GRNYSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPK 222
[Close]
BLAST of Ca_11311 vs. SwissProt
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 4.783e-10
Identity = 45/168 (26.79%), Postives = 67/168 (39.88%), Query Frame = 1 
Query:  184 QSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPK 687
            Q +P+R     +P GL D     RT++           D     T   P++          R R R PW+I E E E KMRFDMPG+             +++                  + EG    W  +S   Y  R+ LP   +   ++AE+K+GVL + +PK
Sbjct:   75 QRRPRRAGFDISPFGLVDPMSPMRTMRQMLDTMDRLFDDAVGFPTRRSPAA----------RARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEG-------QGEGGDGWWKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPK 225
[Close]
BLAST of Ca_11311 vs. SwissProt
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 9.020e-9
Identity = 50/190 (26.32%), Postives = 77/190 (40.53%), Query Frame = 1 
Query:  151 HVSRDINNTNHQSQPKRRTVPSA-----PIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDE------WCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPK 687
            HV++D  N    +  +R    SA     P GL D     RT++           D      L +P++P  S   G  R     PW++ E + E +MRFDMPG+             +++                  KEEG+  E      W  +S   Y  R+ LP   +   ++AE+K+GVL + +PK
Sbjct:   59 HVNQDGGNQQGNAVQRRPRRSSALDGISPFGLVDPMSPMRTMRQMLDTMDRIFDDV----ALGFPATPRRSLATGEVRM----PWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHK-------------KEEGEGAEGSGDGWWKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPK 227
[Close]
BLAST of Ca_11311 vs. TrEMBL
Match: G7J2I8_MEDTR (Chloroplast small heat shock protein OS=Medicago truncatula GN=MTR_3g086050 PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 2.393e-63
Identity = 138/230 (60.00%), Postives = 151/230 (65.65%), Query Frame = 1 
Query:    1 MAQSLSSNLGLNPAMVXXXXXXXXXXXHFLLLQKVKPLRAMTGDAREKLNHVSRDINNTNHQSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            MA SLSSNLGLN +M+           HF  +      RAMTG+AREKL+HVSR  N  +HQSQPK+R  P+APIGLWDRFPT RTVQ           DPFAMST+EWPSSPLP EG GGYRRRGRTPWEIKEGE EYKMRFDMPGM             MLVV                 K++ D DE  SKSYGRYS RI LP+NV+FENIKAEVKDGVLYI IPKA
Sbjct:    1 MAHSLSSNLGLNLSMISKSLSRQT---HFFRV------RAMTGEAREKLDHVSRSNNIKHHQSQPKKRVFPAAPIGLWDRFPTTRTVQEMMETMESMMEDPFAMSTIEWPSSPLPIEGVGGYRRRGRTPWEIKEGESEYKMRFDMPGM-NKEDVKVWVEEKMLVVKAEKAP-----------KKKNDEDEEWSKSYGRYSSRIALPENVQFENIKAEVKDGVLYITIPKA 209
[Close]
BLAST of Ca_11311 vs. TrEMBL
Match: I1LNC8_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.661e-56
Identity = 120/231 (51.95%), Postives = 140/231 (60.61%), Query Frame = 1 
Query:    1 MAQSLSSNLGLNPAMVXXXXXXXXXXXHFLLLQKVKPLRAMTGDAREKLNHVSRDINNTNHQSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKE-EGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            MA +LS+NL LN                     +VKP++ M GDAREKL HV    +N +HQ  PK +  P+ P+GLWDRFPTARTVQ           DPFA STLEWPSSPLPSEG GGYRRRGR PWEIKE E EYKMRFDMPGM             ++V                + +E + + +EW +KSYGRYS RI LP NV+FENIKAEVKDG+LYI IPKA
Sbjct:    1 MAHTLSTNLALNLPTSRYVRPSRPT--------QVKPMKVMMGDAREKLEHVHVPKHNKHHQPLPKNKVAPTPPVGLWDRFPTARTVQEMMETMERMMEDPFAFSTLEWPSSPLPSEGVGGYRRRGRAPWEIKECESEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKAQKKKQENEIVELQQEKQQEEEEWSAKSYGRYSSRIALPDNVQFENIKAEVKDGMLYITIPKA 223
[Close]
BLAST of Ca_11311 vs. TrEMBL
Match: C6TEC9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 8.243e-56
Identity = 119/231 (51.52%), Postives = 139/231 (60.17%), Query Frame = 1 
Query:    1 MAQSLSSNLGLNPAMVXXXXXXXXXXXHFLLLQKVKPLRAMTGDAREKLNHVSRDINNTNHQSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKE-EGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            MA +LS+NL LN                     +VKP++ M GDAREKL HV    +N +HQ  PK +  P+ P+GLWDRFPTARTVQ           DPFA STLEWPSSPLPSEG GGYRRRGR PWEIKE E EYKMRFD PGM             ++V                + +E + + +EW +KSYGRYS RI LP NV+FENIKAEVKDG+LYI IPKA
Sbjct:    1 MAHTLSTNLALNLPTSRYVRPSRPT--------QVKPMKVMMGDAREKLEHVHVPKHNKHHQPLPKNKVAPTPPVGLWDRFPTARTVQEMMETMERMMEDPFAFSTLEWPSSPLPSEGVGGYRRRGRAPWEIKECESEYKMRFDTPGMNKEDVKVWVEEKMLVVKAEKAQKKKQENEIVELQQEKQQEEEEWSAKSYGRYSSRIALPDNVQFENIKAEVKDGMLYITIPKA 223
[Close]
BLAST of Ca_11311 vs. TrEMBL
Match: M5XTX0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010762mg PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.509e-41
Identity = 99/197 (50.25%), Postives = 118/197 (59.90%), Query Frame = 1 
Query:  112 LRAMTGDAREKLNHVSRDINNTNHQSQ----PKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            L+AM  DAR+ L+H+ R    T HQ Q    PK+R   + P+GLWDRFPTARTVQ           DPFA S     +SPLP+E  GGY R GRTPWEIKEGE +YKMRFDMPGM             ++V                  +E+   DEW +KSYGRYS RI LP+N++FE IKAEVKDGVLY+ IPKA
Sbjct:   36 LKAMARDARDNLDHLQRA--TTKHQQQQPPQPKKRVASAPPVGLWDRFPTARTVQQMMETMERMMDDPFAYSGGSGWASPLPTE-TGGYSR-GRTPWEIKEGEADYKMRFDMPGMTKEDVKVWVEEKMLVV---KAEKMTKKKESGVQEEEDNGNDEWSAKSYGRYSTRIALPENIQFEKIKAEVKDGVLYVTIPKA 225
[Close]
BLAST of Ca_11311 vs. TrEMBL
Match: B9HTE1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_769024 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.509e-41
Identity = 103/190 (54.21%), Postives = 115/190 (60.53%), Query Frame = 1 
Query:  121 MTGDAREKLNHVSRDINNTNHQSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            M  ++RE L+H+ R   N   QSQ K+R  P+APIGLWDRFPTARTVQ           DPF  S   WPS PLP EG+G    RGRTPWEIKEGE EYKMRFDMPGM             MLVV                 +EEG   EW +KSYGRYS RI LP+N++FE I AEVKDGVLYI IPKA
Sbjct:    1 MAAESRENLDHLQRARKNPQ-QSQHKKRVAPAAPIGLWDRFPTARTVQQMMETMERVMEDPFVYSG-RWPS-PLPVEGSG--YSRGRTPWEIKEGEDEYKMRFDMPGMTKEDVKVWVEEK-MLVVKAEKVPQKTVNGVENGEEEEG---EWSAKSYGRYSSRIALPENIQFEKITAEVKDGVLYITIPKA 181
[Close]
BLAST of Ca_11311 vs. TrEMBL
Match: K7MPB1_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.971e-41
Identity = 92/155 (59.35%), Postives = 100/155 (64.52%), Query Frame = 1 
Query:  226 GLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            GL DRFPTARTVQ           DPFA STLEWPSSPLPSEG GGYRRRGR PWEI+E E EYKMRFDMPGM             ++V                + +EE   +EW +KSYGRYS RI LP NV+FENIKAEVKDGVLYI IPKA
Sbjct:    8 GLRDRFPTARTVQEMMETMERMMEDPFAFSTLEWPSSPLPSEGVGGYRRRGRAPWEIEECEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKAPKKKQENEIVELQQEE---EEWSAKSYGRYSSRIALPDNVQFENIKAEVKDGVLYITIPKA 159
[Close]
BLAST of Ca_11311 vs. TrEMBL
Match: E5FY24_9ROSA (Chloroplast small heat shock protein 1 OS=Potentilla discolor PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 5.735e-41
Identity = 101/200 (50.50%), Postives = 119/200 (59.50%), Query Frame = 1 
Query:  112 LRAMTGDAREKLNHVSRDINNTNHQ-----SQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLE--WPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            L+AM  +AR+ L+H+ R       +     SQPK+R  P  P+GLWDRFPTARTVQ           DPF  S     W + PLP+E +GGY R GRTPWEIKE E EYKMRFDMPGM             MLVV               + +EEG+  EW +KSYGRYS RI LP+N++FE IKAEVKDGVLYI IPKA
Sbjct:   32 LKAMANEARDNLDHLQRATQRQQQKQQQQLSQPKKRAAPIPPVGLWDRFPTARTVQQMMETMERMVDDPFVYSAQSGGW-APPLPTE-SGGYSR-GRTPWEIKEAETEYKMRFDMPGMTKEDVKVWVEEK-MLVVKAEKAAKKKKDDGTGVEEEEGE--EWSAKSYGRYSSRIALPENIQFEKIKAEVKDGVLYISIPKA 225
[Close]
BLAST of Ca_11311 vs. TrEMBL
Match: B9RMP5_RICCO (Heat shock protein, putative OS=Ricinus communis GN=RCOM_1082490 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.845e-39
Identity = 96/206 (46.60%), Postives = 120/206 (58.25%), Query Frame = 1 
Query:   97 QKVKPLRAMTG-DAREKLNHVSRDINNTNHQ--SQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLV-----VXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            +K   ++AM   ++R+ L+H+ R +N   HQ  +QPK+R    AP+GLWDRFPTARTVQ           DPF  S+  WP+   P EG+G    RGRTPWEIKEGE EYKMRFDMPGM             ++V                       + E + +EW +KSYGRYS RI LP+N++FE IKAEVKDGVLYI IPKA
Sbjct:   40 KKNSVIKAMAASESRDNLDHLQR-VNGKQHQQQAQPKKRVARVAPVGLWDRFPTARTVQQMMETMERMMDDPFTYSS-SWPTPAAPIEGSG--YGRGRTPWEIKEGENEYKMRFDMPGMTKEDVKVWVEEKMLVVKAEKLPKQKVNEERNGEDQKAKAEAEEEEEEWSAKSYGRYSSRIALPENIQFEKIKAEVKDGVLYITIPKA 241
[Close]
BLAST of Ca_11311 vs. TrEMBL
Match: A4LA97_9MYRT (Chloroplast small heat shock protein OS=Epilobium amurense PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.909e-36
Identity = 95/198 (47.98%), Postives = 112/198 (56.57%), Query Frame = 1 
Query:  106 KPLRAMTGDAREKLNHVSRDINNTNHQSQP----KRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPK 687
            + +RAM    R+ L+H+ R       Q QP    KRR    APIGLWDRFPTARTVQ           +PF  S   W SS +P    GGY R GRTPWEIKEGE EYKMRFDMPGM             MLV+                 ++E + +EW +KSYG+YS RI LP+ V+FE I+AEVKDGVLYI IPK
Sbjct:   37 RSIRAMAEGRRDSLDHLQRASQPQKQQQQPQLPPKRRVAAVAPIGLWDRFPTARTVQQMMDTMDRMIEEPFDYSG-GW-SSRMPQSENGGYSR-GRTPWEIKEGENEYKMRFDMPGMTKEDVKVWVEEK-MLVIKAEKVLKNGE-------EQEEEEEEWSAKSYGKYSSRIALPEKVQFEKIRAEVKDGVLYITIPK 223
[Close]
BLAST of Ca_11311 vs. TrEMBL
Match: I3RJI4_MUSAC (Small heat shock protein OS=Musa acuminata AAA Group GN=HSP129 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.257e-36
Identity = 88/193 (45.60%), Postives = 105/193 (54.40%), Query Frame = 1 
Query:  112 LRAMTGDAREKLNHVSRDINNTNHQSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            + AM   +R+ L+H+ R       Q   KRR  PS+PIGLWDRFPTART+Q           DP A      PS  L  E + G  RR RTPWEIKEG +EY+MRFDMPGM             +++                +   EG+ +EW + SYGRYS RI LP NV  E IKAEVKDGVLYI IPKA
Sbjct:   29 ITAMGAQSRDNLDHMQRASKPQQSQPLLKRRAAPSSPIGLWDRFPTARTIQQMMDTMERVMEDPLAYGGASLPS--LSGEDSVGSYRRRRTPWEIKEGAVEYRMRFDMPGMTKKDVKVWVEERMLVI------------EAEKLPAMEGEAEEWSATSYGRYSSRIALPDNVLVEQIKAEVKDGVLYITIPKA 207
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BLAST of Ca_11311 vs. DB:Swiss
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum OX=3888 GN=HSP21 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.892e-20
Identity = 74/204 (36.27%), Postives = 111/204 (54.41%), Query Frame = 1 
Query:   88 LLLQKVKPLRAMTGDARE---KLNHVSRDINNTNHQSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            L L+ V+      GD ++   +++ V++D   T  + +P+R ++  +P GL D +   R++++M++TM+R+ ED             +P    GG   R   PWEIK+ E E +MRFDMPG+ KEDVKV VE+  +++    +             +E G  D W  KSY  Y  R+ LP N E E +KAE+KDGVLYI IPK 
Sbjct:   42 LGLRNVRAQAGGDGDNKDNSVEVHRVNKDDQGTAVERKPRRSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFEDAIT----------IPGRNIGGGEIR--VPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHR-------------EENGGEDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKT 220
[Close]
BLAST of Ca_11311 vs. DB:Swiss
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max OX=3847 GN=HSP22 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.032e-18
Identity = 74/195 (37.95%), Postives = 113/195 (57.95%), Query Frame = 1 
Query:  142 KLNHVSRDINNTNHQSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKAXXXXXXXXXXVQ 726
            ++ HVS+    T  + +P+R  +  +P G+ D +   R+++++++TM+R+ ED     T+ +P   +   G G  R     PW+IK+ E E +MRFDMPG+ KEDVKV VE+  MLV+K    S+          +E G  D W S++Y  Y  R+ LP N E + +KAE+K+GVLYI IPK     KV++  VQ
Sbjct:   10 EVQHVSKGDQGTAVEKKPRRTAMDISPFGILDPWSPMRSMRQILDTMDRVFED-----TMTFPGRNI---GGGEIR----APWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDD-MLVIKGGHKSE----------QEHGGDDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTKVERKVIDVQVQ 181
[Close]
BLAST of Ca_11311 vs. DB:Swiss
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida OX=4102 GN=HSP22 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.870e-15
Identity = 66/173 (38.15%), Postives = 96/173 (55.49%), Query Frame = 1 
Query:  184 QSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRG----RTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            + +P+R  +  +P GL D     RT+++MM+TM+R+ ED     T+ +P          G R RG    R PW+IK+ E E KMRFDMPG+ KE+VKV VE+  +++    K             +E G  D W  ++Y  Y  R+ LP NV+ + +KAE+K+GVL I IPK 
Sbjct:   85 ERRPRRMALDVSPFGLLDPMSPMRTMRQMMDTMDRLFED-----TMTFP----------GSRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKK------------EESGKDDSW-GRNYSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPKT 229
[Close]
BLAST of Ca_11311 vs. DB:Swiss
Match: HS25P_ARATH (Heat shock protein 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP21 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.177e-14
Identity = 66/165 (40.00%), Postives = 92/165 (55.76%), Query Frame = 1 
Query:  196 KRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            +R T+  +P GL D     RT+++M++TM+RM ED   +S          + G  G     R PW+IKE E E KMRFDMPG+ KEDVK+ VE+  +++             + E  KE+ D D W  +S   Y  R+ LP N E + IKAE+K+GVL+I IPK 
Sbjct:   74 QRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFEDTMPVSGR--------NRGGSGVSE-IRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVI-------------KGEQKKEDSD-DSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKT 215
[Close]
BLAST of Ca_11311 vs. DB:Swiss
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum OX=4081 GN=HSP21 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.166e-12
Identity = 76/196 (38.78%), Postives = 106/196 (54.08%), Query Frame = 1 
Query:  124 TGDARE---KLNHVSRDINN---TNHQSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWC-SKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            TGD ++    ++H S    N   T  + +P R  +  +P G+ D     RT+++M++TM+R+ ED     T+ +P     S G G  R    TPW+I + E E KMRFDMPG+ KEDVKV VE   MLV+K E              KEE   D+    ++Y  Y  R+ LP NV  + IKAE+K+GVL+I IPK 
Sbjct:   51 TGDNKDTSVDVHHSSAQGGNNQGTAVERRPTRMALDVSPFGVLDPMSPMRTMRQMIDTMDRLFED-----TMTFPGRNRAS-GTGEIR----TPWDIHDDENEIKMRFDMPGLSKEDVKVSVEND-MLVIKGEHK------------KEEDGRDKHSWGRNYSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPKT 223
[Close]
BLAST of Ca_11311 vs. DB:Swiss
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HSP26.7 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 2.552e-8
Identity = 58/184 (31.52%), Postives = 97/184 (52.72%), Query Frame = 1 
Query:  151 HVSRDINNTNH---QSQPKRRTVPS--APIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPK 687
            HV++D  N      Q +P+R +     +P GL D     RT+++M++TM+R+ +D      L +P++P  S   G  R     PW++ E + E +MRFDMPG+ +E+VKV VE+  +++       + +   EE    E      W  +S   Y  R+ LP   +   ++AE+K+GVL + +PK
Sbjct:   59 HVNQDGGNQQGNAVQRRPRRSSALDGISPFGLVDPMSPMRTMRQMLDTMDRIFDD----VALGFPATPRRSLATGEVR----MPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVI-------RGEHKKEEGEGAEGSGDGWWKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPK 227
[Close]
BLAST of Ca_11311 vs. DB:Swiss
Match: HS26M_ARATH (26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP26.5 PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 3.029e-7
Identity = 37/103 (35.92%), Postives = 62/103 (60.19%), Query Frame = 1 
Query:  391 EIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDE---WCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPKA 690
            ++KE +  YK+R+++PG+ KEDVK+ V +  + +    K             +E+G  +E   W SKSYG Y+  + LP + + E+IKAE+K+GVL ++IP+ 
Sbjct:  128 QVKEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAE-----------EEKGSPEEDEYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRT 219
[Close]
BLAST of Ca_11311 vs. DB:Swiss
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum OX=4565 GN=HSP21 PE=2 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 7.146e-7
Identity = 58/205 (28.29%), Postives = 99/205 (48.29%), Query Frame = 1 
Query:  100 KVKPLRAMTGDAREKLNHVSRDINNTNH---------QSQPKRRTVPSAPIGLWDRFPTARTVQXXXXXXXXXXXDPFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMXXXXXXXXXXXXXMLVVXXXXXXXXXXXXXXXMVKEEGDVDEWCSKSYGRYSGRIVLPQNVEFENIKAEVKDGVLYIIIPK 687
            + +PL   +     + N V   ++   +         Q +P+R     +P GL D     RT+++M++TM+R+ +D              P+  +   R R R PW+I E E E KMRFDMPG+ +E+V+V VE+  +++       + +   E    + EG    W  +S   Y  R+ LP   +   ++AE+K+GVL + +PK
Sbjct:   38 RTRPLSVASAAQENRDNSVDVQVSQAQNAGNQQGNAVQRRPRRAGFDISPFGLVDPMSPMRTMRQMLDTMDRLFDDAVG----------FPTRRSPAARARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVI-------RGEHKKEAGEGQGEGGDGWWKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPK 225
The following BLAST results are available for this feature:
BLAST of Ca_11311 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 7
Match NameE-valueIdentityDescription
HS21C_PEA6.890e-1729.85Small heat shock protein, chloroplastic OS=Pisum s... [more]
HS22C_SOYBN9.949e-1630.11Small heat shock protein, chloroplastic (Fragment)... [more]
HS22C_PETHY1.216e-1330.43Small heat shock protein, chloroplastic OS=Petunia... [more]
HS25P_ARATH1.030e-1229.6525.3 kDa heat shock protein, chloroplastic OS=Arab... [more]
HS21C_SOLLC7.379e-1131.28Small heat shock protein, chloroplastic OS=Solanum... [more]
HS21C_WHEAT4.783e-1026.79Small heat shock protein, chloroplastic OS=Triticu... [more]
HS26P_ORYSJ9.020e-926.3226.7 kDa heat shock protein, chloroplastic OS=Oryz... [more]
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BLAST of Ca_11311 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7J2I8_MEDTR2.393e-6360.00Chloroplast small heat shock protein OS=Medicago t... [more]
I1LNC8_SOYBN1.661e-5651.95Uncharacterized protein OS=Glycine max PE=3 SV=1[more]
C6TEC9_SOYBN8.243e-5651.52Putative uncharacterized protein OS=Glycine max PE... [more]
M5XTX0_PRUPE1.509e-4150.25Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
B9HTE1_POPTR1.509e-4154.21Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
K7MPB1_SOYBN1.971e-4159.35Uncharacterized protein OS=Glycine max PE=3 SV=1[more]
E5FY24_9ROSA5.735e-4150.50Chloroplast small heat shock protein 1 OS=Potentil... [more]
B9RMP5_RICCO1.845e-3946.60Heat shock protein, putative OS=Ricinus communis G... [more]
A4LA97_9MYRT1.909e-3647.98Chloroplast small heat shock protein OS=Epilobium ... [more]
I3RJI4_MUSAC3.257e-3645.60Small heat shock protein OS=Musa acuminata AAA Gro... [more]

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BLAST of Ca_11311 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 8
Match NameE-valueIdentityDescription
HS21C_PEA7.892e-2036.27Small heat shock protein, chloroplastic OS=Pisum s... [more]
HS22C_SOYBN1.032e-1837.95Small heat shock protein, chloroplastic (Fragment)... [more]
HS22C_PETHY5.870e-1538.15Small heat shock protein, chloroplastic OS=Petunia... [more]
HS25P_ARATH1.177e-1440.00Heat shock protein 21, chloroplastic OS=Arabidopsi... [more]
HS21C_SOLLC1.166e-1238.78Small heat shock protein, chloroplastic OS=Solanum... [more]
HS26P_ORYSJ2.552e-831.5226.7 kDa heat shock protein, chloroplastic OS=Oryz... [more]
HS26M_ARATH3.029e-735.9226.5 kDa heat shock protein, mitochondrial OS=Arab... [more]
HS21C_WHEAT7.146e-728.29Small heat shock protein, chloroplastic OS=Triticu... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Heat shock protein Hsp20PFAMPF00011HSP20coord: 131..235
score: 5.1
IPR002068Heat shock protein Hsp20PROFILEPS01031HSP20coord: 131..229
score: 20
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 86..233
score: 1.7
NoneNo IPR availableGENE3D2.60.40.790no descriptioncoord: 79..234
score: 2.1
NoneNo IPR availablePANTHERPTHR11527FAMILY NOT NAMEDcoord: 77..229
score: 2.7
NoneNo IPR availablePANTHERPTHR11527:SF17HEAT-SHOCK PROTEIN 22coord: 77..229
score: 2.7
NoneNo IPR availableSEGsegsegcoord: 17..27
score: NAcoord: 89..99
score: NAcoord: 149..161
score: NAcoord: 166..180
score: NAcoord: 231..240
score
NoneNo IPR availableSEGsegsegcoord: 78..87
score
NoneNo IPR availableSEGsegsegcoord: 54..80
score
NoneNo IPR availableSEGsegsegcoord: 6..23
score: NAcoord: 31..48
score: NAcoord: 52..65
score: NAcoord: 96..107
score: NAcoord: 127..139
score: NAcoord: 169..179
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_11311_v1.0_kabuli ID=Ca_11311_v1.0_kabuli; Name=Ca_11311; organism=Cicer arietinum; type=mRNA; length=729bp
ATGGCACAATCTTTATCCTCTAATCTAGGTCTTAACCCGGCCATGGTTTC
CAAGAGTTCATCAAGCACCTCAAGATCAACCCATTTTCTTCTATTGCAAA
AGGTAAAGCCCCTCAGAGCCATGACAGGGGACGCAAGAGAAAAACTCAAC
CATGTCTCAAGAGACATCAACAATACCAACCACCAATCCCAACCCAAAAG
AAGAACCGTTCCTTCCGCACCCATAGGGTTATGGGATCGATTTCCTACAG
CAAGAACAGTACAAGAGATGATGGAGACAATGGAAAGAATGATGGAAGAT
CCATTTGCAATGAGCACACTTGAGTGGCCATCATCACCTCTTCCAAGTGA
AGGAGCAGGTGGATATCGAAGGAGGGGAAGAACACCATGGGAGATTAAAG
AAGGAGAAATTGAATACAAGATGAGGTTTGACATGCCTGGTATGAAAAAA
GAAGATGTGAAAGTGTGGGTTGAAGAGAAGAAGATGCTTGTGGTTAAAGC
TGAGAAGGGATCCAAGAAGAAGAAGATTGGAGAAGAAGAGATGGTGAAAG
AAGAAGGAGATGTTGATGAATGGTGTTCTAAGAGCTATGGTAGATATAGT
GGCAGAATTGTTTTGCCTCAGAATGTGGAGTTTGAGAATATTAAGGCAGA
GGTTAAGGATGGTGTTCTTTACATTATAATTCCTAAGGCTTCTAGCTCCT
CCAAAGTCTTGAATTCTAGTGTTCAATGA
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protein sequence of Ca_11311_v1.0_kabuli

>Ca_11311_v1.0_kabuli ID=Ca_11311_v1.0_kabuli; Name=Ca_11311_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=242bp
MAQSLSSNLGLNPAMVSKSSSSTSRSTHFLLLQKVKPLRAMTGDAREKLN
HVSRDINNTNHQSQPKRRTVPSAPIGLWDRFPTARTVQEMMETMERMMED
PFAMSTLEWPSSPLPSEGAGGYRRRGRTPWEIKEGEIEYKMRFDMPGMKK
EDVKVWVEEKKMLVVKAEKGSKKKKIGEEEMVKEEGDVDEWCSKSYGRYS
GRIVLPQNVEFENIKAEVKDGVLYIIIPKASSSSKVLNSSVQ
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mRNA from alignment at Ca5:42969085..42970157+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_11311_v1.0_kabuli ID=Ca_11311_v1.0_kabuli; Name=Ca_11311; organism=Cicer arietinum; type=mRNA; length=1073bp; location=Sequence derived from: Ca5:42969085..42970157+ (Cicer arietinum
ATGGCACAATCTTTATCCTCTAATCTAGGTCTTAACCCGGCCATGGTTTC
CAAGAGTTCATCAAGCACCTCAAGATCAACCCATTTTCTTCTATTGCAAA
AGGTAAAGCCCCTCAGAGCCATGACAGGGGACGCAAGAGAAAAACTCAAC
CATGTCTCAAGAGACATCAACAATACCAACCACCAATCCCAACCCAAAAG
AAGAACCGTTCCTTCCGCACCCATAGGTAAGTATTGATAATTTTTTGCTC
TTCATGATAAGTTTGGATAACTGGCTTTATTAGAACCAGCTTGTTACGTT
TTTTTGCTAAAAGAATCAGTTTTTAAAAAACAGCTTTCTAAAACTGCTTA
AATGAGAATTTATTTTTAAAAGTTTATAAAAAAAATCATTTTTGATAACT
GATTTTATATAAAAAAAAAATGATTTTTATTACAAGAAGATAAACCCAAA
ATAATTTCTACTTTTCTATTAATTATTTGTATAAACTCTTTCTAAGTGTC
TCATAAGTGCTTAAGTTTAAATAAATCAATTAAAACACATACTTAATTAA
TCGGACACATTAAAAAGCAGGGTTATGGGATCGATTTCCTACAGCAAGAA
CAGTACAAGAGATGATGGAGACAATGGAAAGAATGATGGAAGATCCATTT
GCAATGAGCACACTTGAGTGGCCATCATCACCTCTTCCAAGTGAAGGAGC
AGGTGGATATCGAAGGAGGGGAAGAACACCATGGGAGATTAAAGAAGGAG
AAATTGAATACAAGATGAGGTTTGACATGCCTGGTATGAAAAAAGAAGAT
GTGAAAGTGTGGGTTGAAGAGAAGAAGATGCTTGTGGTTAAAGCTGAGAA
GGGATCCAAGAAGAAGAAGATTGGAGAAGAAGAGATGGTGAAAGAAGAAG
GAGATGTTGATGAATGGTGTTCTAAGAGCTATGGTAGATATAGTGGCAGA
ATTGTTTTGCCTCAGAATGTGGAGTTTGAGAATATTAAGGCAGAGGTTAA
GGATGGTGTTCTTTACATTATAATTCCTAAGGCTTCTAGCTCCTCCAAAG
TCTTGAATTCTAGTGTTCAATGA
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Coding sequence (CDS) from alignment at Ca5:42969085..42970157+

>Ca_11311_v1.0_kabuli ID=Ca_11311_v1.0_kabuli; Name=Ca_11311; organism=Cicer arietinum; type=CDS; length=729bp; location=Sequence derived from: Ca5:42969085..42970157+ (Cicer arietinum
ATGGCACAATCTTTATCCTCTAATCTAGGTCTTAACCCGGCCATGGTTTC
CAAGAGTTCATCAAGCACCTCAAGATCAACCCATTTTCTTCTATTGCAAA
AGGTAAAGCCCCTCAGAGCCATGACAGGGGACGCAAGAGAAAAACTCAAC
CATGTCTCAAGAGACATCAACAATACCAACCACCAATCCCAACCCAAAAG
AAGAACCGTTCCTTCCGCACCCATAGGGTTATGGGATCGATTTCCTACAG
CAAGAACAGTACAAGAGATGATGGAGACAATGGAAAGAATGATGGAAGAT
CCATTTGCAATGAGCACACTTGAGTGGCCATCATCACCTCTTCCAAGTGA
AGGAGCAGGTGGATATCGAAGGAGGGGAAGAACACCATGGGAGATTAAAG
AAGGAGAAATTGAATACAAGATGAGGTTTGACATGCCTGGTATGAAAAAA
GAAGATGTGAAAGTGTGGGTTGAAGAGAAGAAGATGCTTGTGGTTAAAGC
TGAGAAGGGATCCAAGAAGAAGAAGATTGGAGAAGAAGAGATGGTGAAAG
AAGAAGGAGATGTTGATGAATGGTGTTCTAAGAGCTATGGTAGATATAGT
GGCAGAATTGTTTTGCCTCAGAATGTGGAGTTTGAGAATATTAAGGCAGA
GGTTAAGGATGGTGTTCTTTACATTATAATTCCTAAGGCTTCTAGCTCCT
CCAAAGTCTTGAATTCTAGTGTTCAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone