Ca_11404, Ca_11404_v1.0_kabuli (mRNA) Cicer arietinum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_11404 vs. SwissProt
Match: RBG4_ARATH (Glycine-rich RNA-binding protein 4, mitochondrial OS=Arabidopsis thaliana GN=RBG4 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 5.247e-31 Identity = 65/100 (65.00%), Postives = 80/100 (80.00%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
MAFCNK+ ILRQG +QSS PV+SML +R+MS SKLF+GGLS+G DD SL+ AF SFGEV EA VI DR+TGRSRGFGFV+FS ++ A +A+ MDG+
Sbjct: 1 MAFCNKLSGILRQGVSQSSNGPVTSMLGSLRYMS-SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGK 99
BLAST of Ca_11404 vs. SwissProt
Match: RBG2_ARATH (Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=RBG2 PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.994e-30 Identity = 64/100 (64.00%), Postives = 81/100 (81.00%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
MAFCNK+G +LRQ + + PV+SML +R MS +KLFIGGLS+G DD SLRDAFA FG+VV+A+VI DR+TGRSRGFGFVNF+ + AT+A+S MDG+
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLMS-TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 99
BLAST of Ca_11404 vs. SwissProt
Match: RBG3_ARATH (Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana GN=RBG3 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.479e-25 Identity = 58/105 (55.24%), Postives = 77/105 (73.33%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVS----SMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
MAF +K GNIL+Q + A VS S+ +R MS SKLFIGG++Y +D+ SLR+AF +GEVV+ RVI DR+TGRSRGFGFV F+S E A+SA+ A+DG++
Sbjct: 1 MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRD 105
BLAST of Ca_11404 vs. SwissProt
Match: RT19_ARATH (40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana GN=RPS19 PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 1.252e-24 Identity = 59/100 (59.00%), Postives = 76/100 (76.00%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
MAFC K+G +QG PVSSML +R+MS +KL+IGGLS G D+ SL+DAF+SF V EARV+T++ TGRSRG+GFVNF S++ A SA+SAM+GQ
Sbjct: 1 MAFCTKLGGHWKQGVN----VPVSSMLGSLRYMS-TKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQ 95
BLAST of Ca_11404 vs. SwissProt
Match: RBG5_ARATH (Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana GN=RBG5 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.409e-22 Identity = 50/101 (49.50%), Postives = 76/101 (75.25%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
MAF +K+G + Q ++ + + SSML +R MS SK+F+GG+SY D+ LR+AF+ +GEVV+A++I DR+TGRSRGF FV F+S E+A++A+ +DGQ+
Sbjct: 1 MAFLSKVGRLFSQTSSHVTAS--SSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQD 98
BLAST of Ca_11404 vs. SwissProt
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.313e-17 Identity = 36/65 (55.38%), Postives = 54/65 (83.08%), Query Frame = 1 Query: 109 KLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
+ F+GGL + DDQSL++AF+ +G+V+++++ITDR+TGRSRGFGFV F+SDE A+ AM+GQ+
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQD 71
BLAST of Ca_11404 vs. SwissProt
Match: RBG6_ARATH (Glycine-rich RNA-binding protein 6, mitochondrial OS=Arabidopsis thaliana GN=RBG6 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.272e-15 Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAA-QSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
M ++ GNI RQ A Q+S A + L+ ++ SK+F+GGLS D + L++AF SFG++V+A V+ DR++G SRGFGFV + S E A +A+ AM +
Sbjct: 4 MGLFSRAGNIFRQPRALQASNAMLQGNLS----LTPSKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAMQNK 100
BLAST of Ca_11404 vs. SwissProt
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.174e-14 Identity = 33/64 (51.56%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 109 KLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
+ F+GGL++ ++SL +AFAS+GE+++++VITDR+TGRSRGFGFV FSS+ A+ M+G+
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGK 72
BLAST of Ca_11404 vs. SwissProt
Match: RBM3_MOUSE (Putative RNA-binding protein 3 OS=Mus musculus GN=Rbm3 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.534e-14 Identity = 33/67 (49.25%), Postives = 51/67 (76.12%), Query Frame = 1 Query: 103 QSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
+ KLF+GGL++ D+Q+L D F+SFG + E V+ DR+T RSRGFGF+ F++ E A+ A+ AM+G++
Sbjct: 5 EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGES 71
BLAST of Ca_11404 vs. SwissProt
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.534e-14 Identity = 32/64 (50.00%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 109 KLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
+ F+GGL++ ++++L AFA+FG+V++++VITDR+TGRSRGFGFV FSS++ A+ M+G+
Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGK 72
BLAST of Ca_11404 vs. TrEMBL
Match: P93486_PEA (Glycine-rich RNA-binding protein OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 2.653e-43 Identity = 89/101 (88.12%), Postives = 96/101 (95.05%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
MAFCNK+GN+LRQGA QSS APVSSMLNY+R MS SKLFIGGLSYGVDDQSL+DAFAS+GEVVEARVITDRDTGRSRGFGFVNF+SDE ATSALSAMDGQ+
Sbjct: 1 MAFCNKLGNLLRQGATQSSHAPVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQD 101
BLAST of Ca_11404 vs. TrEMBL
Match: C6T3N5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.610e-40 Identity = 81/101 (80.20%), Postives = 96/101 (95.05%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
MAFCNK+GN+LRQGAA+S+ APVSSMLNY+R MS SKLFIGGLSYGVDDQSL+DAF+ FG+VV+A+VITDRD+GRSRGFGFVNFS+DE A+SALSAMDG++
Sbjct: 1 MAFCNKVGNVLRQGAARSTQAPVSSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKD 101
BLAST of Ca_11404 vs. TrEMBL
Match: I1LN27_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.102e-40 Identity = 81/100 (81.00%), Postives = 95/100 (95.00%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
MAFCNK+GN+LRQGAA+S+ APVSSMLNY+R MS SKLFIGGLSYGVDDQSL+DAF+ FG+VV+A+VITDRD+GRSRGFGFVNFS+DE A+SALSAMDG+
Sbjct: 1 MAFCNKVGNVLRQGAARSTQAPVSSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGK 100
BLAST of Ca_11404 vs. TrEMBL
Match: C6SXA0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 4.683e-40 Identity = 80/101 (79.21%), Postives = 96/101 (95.05%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
MAFCNK+GN+LRQGAA+S+ APV+SMLNY+R MS SKLFIGGLSYGVDDQSL+DAF+ FG+VV+A+VITDRD+GRSRGFGFVNFS+DE A+SALSAMDG++
Sbjct: 1 MAFCNKVGNVLRQGAARSTHAPVASMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKD 101
BLAST of Ca_11404 vs. TrEMBL
Match: G7JA80_MEDTR (Glycine-rich RNA-binding protein OS=Medicago truncatula GN=MTR_3g084040 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 5.178e-39 Identity = 83/101 (82.18%), Postives = 93/101 (92.08%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
MAFCNKIGN+LRQGA QS+ APVSSMLNY+R MS SKLFIGGLSY VDDQSLRDAF ++G+VVEARVITDR+TGRSRGFGFVNF+S+E ATSALS MDGQ+
Sbjct: 1 MAFCNKIGNLLRQGATQSTQAPVSSMLNYLRHMSSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATSALS-MDGQD 100
BLAST of Ca_11404 vs. TrEMBL
Match: I1MYA1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 7.477e-38 Identity = 79/101 (78.22%), Postives = 94/101 (93.07%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
MAFCNK+GN+LRQGAA+S+ APV+SMLNY+R MS SKLFIGGLSYGVDDQSL+DAF+ FG+VV+ VITDRD+GRSRGFGFVNFS+DE A+SALSAMDG++
Sbjct: 1 MAFCNKVGNVLRQGAARSTHAPVASMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVD--VITDRDSGRSRGFGFVNFSNDESASSALSAMDGKD 99
BLAST of Ca_11404 vs. TrEMBL
Match: I3T3M6_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 9.766e-38 Identity = 79/101 (78.22%), Postives = 90/101 (89.11%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
MAF NK+GN+LRQGAAQ S APV+SMLNY+R MS SKLFIGGLSYGVDD+SL DAF+SFG V EARVI DRDTGRSRGFGFV+F S+E A+SALS+MDGQ+
Sbjct: 1 MAFLNKVGNVLRQGAAQRSQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFGTVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQD 101
BLAST of Ca_11404 vs. TrEMBL
Match: I3T8D1_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 4.847e-37 Identity = 78/101 (77.23%), Postives = 89/101 (88.12%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
MAF NK+GN+LRQ AAQ S APV+SMLNY+R MS SKLFIGGLSYGVDD+SL DAF+SFG V EARVI DRDTGRSRGFGFV+F S+E A+SALS+MDGQ+
Sbjct: 1 MAFLNKVGNVLRQAAAQRSQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFGTVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQD 101
BLAST of Ca_11404 vs. TrEMBL
Match: B9S9Z2_RICCO (Glycine-rich RNA-binding protein, putative OS=Ricinus communis GN=RCOM_0523760 PE=4 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.724e-34 Identity = 74/100 (74.00%), Postives = 86/100 (86.00%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
MAFCNKIG+++RQ AQ+ PVSSMLN +R MS SKLFIGGLSYG +D SL+DAF+ FG+VV ARVITDRDTGRSRGFGFV+FSS + A+SALSAMDGQ
Sbjct: 1 MAFCNKIGSLVRQSVAQNGKVPVSSMLNSIRCMSSSKLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSASSALSAMDGQ 100
BLAST of Ca_11404 vs. TrEMBL
Match: A5C101_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0029g00440 PE=4 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 8.555e-34 Identity = 73/104 (70.19%), Postives = 89/104 (85.58%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAP----VSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
MAFCN+ GN+LRQ +Q+S + + ++LN +R MS +KLFIGGLSYG DDQSL+DAF+SFG+VVEARVITDRDTGRSRGFGFVNF+SD+ A+SALSAMDGQ
Sbjct: 1 MAFCNRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSSAKLFIGGLSYGTDDQSLKDAFSSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSALSAMDGQ 104
BLAST of Ca_11404 vs. DB:Swiss
Match: RBG4_ARATH (Glycine-rich RNA-binding protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG4 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.606e-41 Identity = 65/100 (65.00%), Postives = 80/100 (80.00%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
MAFCNK+ ILRQG +QSS PV+SML +R+MS SKLF+GGLS+G DD SL+ AF SFGEV EA VI DR+TGRSRGFGFV+FS ++ A +A+ MDG+
Sbjct: 1 MAFCNKLSGILRQGVSQSSNGPVTSMLGSLRYMS-SKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGK 99
BLAST of Ca_11404 vs. DB:Swiss
Match: RBG2_ARATH (Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG2 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 4.335e-40 Identity = 64/100 (64.00%), Postives = 81/100 (81.00%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
MAFCNK+G +LRQ + + PV+SML +R MS +KLFIGGLS+G DD SLRDAFA FG+VV+A+VI DR+TGRSRGFGFVNF+ + AT+A+S MDG+
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLMS-TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGK 99
BLAST of Ca_11404 vs. DB:Swiss
Match: RT19_ARATH (40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS19 PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 3.042e-33 Identity = 59/100 (59.00%), Postives = 76/100 (76.00%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
MAFC K+G +QG PVSSML +R+MS +KL+IGGLS G D+ SL+DAF+SF V EARV+T++ TGRSRG+GFVNF S++ A SA+SAM+GQ
Sbjct: 1 MAFCTKLGGHWKQGVN----VPVSSMLGSLRYMS-TKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQ 95
BLAST of Ca_11404 vs. DB:Swiss
Match: RBG3_ARATH (Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG3 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.810e-31 Identity = 58/105 (55.24%), Postives = 77/105 (73.33%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVS----SMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
MAF +K GNIL+Q + A VS S+ +R MS SKLFIGG++Y +D+ SLR+AF +GEVV+ RVI DR+TGRSRGFGFV F+S E A+SA+ A+DG++
Sbjct: 1 MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRD 105
BLAST of Ca_11404 vs. DB:Swiss
Match: RBG5_ARATH (Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG5 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.333e-26 Identity = 50/101 (49.50%), Postives = 76/101 (75.25%), Query Frame = 1 Query: 1 MAFCNKIGNILRQGAAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
MAF +K+G + Q ++ + + SSML +R MS SK+F+GG+SY D+ LR+AF+ +GEVV+A++I DR+TGRSRGF FV F+S E+A++A+ +DGQ+
Sbjct: 1 MAFLSKVGRLFSQTSSHVTAS--SSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQD 98
BLAST of Ca_11404 vs. DB:Swiss
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare OX=4513 GN=blt801 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.080e-21 Identity = 36/67 (53.73%), Postives = 55/67 (82.09%), Query Frame = 1 Query: 103 QSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQN 303
+ + F+GGL + DDQSL++AF+ +G+V+++++ITDR+TGRSRGFGFV F+SDE A+ AM+GQ+
Sbjct: 5 EYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQD 71
BLAST of Ca_11404 vs. DB:Swiss
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays OX=4577 GN=RAB15 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.999e-19 Identity = 33/66 (50.00%), Postives = 52/66 (78.79%), Query Frame = 1 Query: 103 QSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
+ + F+GGL++ ++SL +AFAS+GE+++++VITDR+TGRSRGFGFV FSS+ A+ M+G+
Sbjct: 7 EYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGK 72
BLAST of Ca_11404 vs. DB:Swiss
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor OX=4558 GN=GRP2 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.003e-18 Identity = 32/64 (50.00%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 109 KLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
+ F+GGL++ ++++L AFA+FG+V++++VITDR+TGRSRGFGFV FSS++ A+ M+G+
Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGK 72
BLAST of Ca_11404 vs. DB:Swiss
Match: RBG6_ARATH (Glycine-rich RNA-binding protein 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG6 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.196e-18 Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = 1 Query: 1 MAFCNKIGNILRQG-AAQSSPAPVSSMLNYVRFMSQSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
M ++ GNI RQ A Q+S A + L+ ++ SK+F+GGLS D + L++AF SFG++V+A V+ DR++G SRGFGFV + S E A +A+ AM +
Sbjct: 4 MGLFSRAGNIFRQPRALQASNAMLQGNLS----LTPSKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAMQNK 100
BLAST of Ca_11404 vs. DB:Swiss
Match: RBM3_MOUSE (RNA-binding protein 3 OS=Mus musculus OX=10090 GN=Rbm3 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.754e-18 Identity = 33/66 (50.00%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 103 QSKLFIGGLSYGVDDQSLRDAFASFGEVVEARVITDRDTGRSRGFGFVNFSSDEQATSALSAMDGQ 300
+ KLF+GGL++ D+Q+L D F+SFG + E V+ DR+T RSRGFGF+ F++ E A+ A+ AM+G+
Sbjct: 5 EGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGE 70 The following BLAST results are available for this feature:
BLAST of Ca_11404 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_11404 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_11404 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_11404_v1.0_kabuli ID=Ca_11404_v1.0_kabuli; Name=Ca_11404; organism=Cicer arietinum; type=mRNA; length=342bpback to top protein sequence of Ca_11404_v1.0_kabuli >Ca_11404_v1.0_kabuli ID=Ca_11404_v1.0_kabuli; Name=Ca_11404_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=113bpback to top mRNA from alignment at Ca5:42074109..42075324+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_11404_v1.0_kabuli ID=Ca_11404_v1.0_kabuli; Name=Ca_11404; organism=Cicer arietinum; type=mRNA; length=1216bp; location=Sequence derived from: Ca5:42074109..42075324+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:42074109..42075324+ >Ca_11404_v1.0_kabuli ID=Ca_11404_v1.0_kabuli; Name=Ca_11404; organism=Cicer arietinum; type=CDS; length=342bp; location=Sequence derived from: Ca5:42074109..42075324+ (Cicer arietinumback to top |