Ca_12711, Ca_12711_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_12711 vs. TrEMBL
Match: I1K4H8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 5.898e-57 Identity = 150/308 (48.70%), Postives = 187/308 (60.71%), Query Frame = 1 Query: 1 MTLSTSHHLFPHSFCFTRTTIAPAACFRTSSLN---SFGL-----------------HRFGSFTTRTTDAFHLKTRESEVYVQKRVVSSDHNFDSLLSAVELSCLVSSAIVSVDLAV-NGSKNWLLMVSGNKVSVVWGVLMLMSGVAVGLGAWIXXXXXXXXXXESGKGGL----MERVEKLEEDLRSTMRVLRVLSRHAEKLGKRIRGTRHALKDPITQSATVAQKNSEATRAVAVQYEILEKEIREIQKVLLAMQEQQEKQLDLILSLGKPGKPWEIKDKTLKEQNTLETTNSAEDEVEHVEDHQI 849 M L+ HH FPHSF T T + C + N SF + RF S T R D+F L++ V+ NFDSLLS +E SCL+SSA+ S AV GSKN LL+ G + + G L++ V V +GAWI E+GKGGL +ER+EKLEED+RS+ V+RVLSR EKLG R R TR ALKDPI ++A +AQKNSEA RA+AVQ +ILEKE+ EIQ+VLLAMQEQQ KQLDLIL++GK K WE K +T + +TLE +NSAEDEV+ E HQI Sbjct: 1 MLLTCYHHPFPHSFSSTSTH---SLCTTNRNCNLSLSFSIVTSRPLHLTTQNLNLTAQRFNSLTVRA-DSFCLRSEHV-------AVAGVSNFDSLLSLLEFSCLLSSAVASAAAAVVAGSKNELLVGIGTRAAPFGGALLV---VGVLVGAWIRRRQWRRACVETGKGGLEVNLLERIEKLEEDMRSSATVVRVLSRQLEKLGVRFRVTRKALKDPIAETAALAQKNSEAARALAVQSDILEKELGEIQQVLLAMQEQQRKQLDLILAIGKASKLWESKHETSERHDTLEMSNSAEDEVKQ-EVHQI 293
BLAST of Ca_12711 vs. TrEMBL
Match: I1KSZ3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 7.703e-57 Identity = 148/301 (49.17%), Postives = 186/301 (61.79%), Query Frame = 1 Query: 1 MTLSTSHHLFPHSFCFTRT----------TIAPAACFRTSS---LNSFGLHRFGSFTTRTTDAFHLKTRESEVYVQKRVVSSDHNFDSLLSAVELSCLVSSAIVSVDLAV-NGSKNWLLMVSGNKVSVVWGVLMLMSGVAVGLGAWIXXXXXXXXXXESGKGGL----MERVEKLEEDLRSTMRVLRVLSRHAEKLGKRIRGTRHALKDPITQSATVAQKNSEATRAVAVQYEILEKEIREIQKVLLAMQEQQEKQLDLILSLGKPGKPWEIKDKTLKEQNTLETTNSAEDEVEHVEDHQI 849 M L+ HH FPHS T T ++ + TS L + HRF S T R D+F L++ + ++D NFDSLLS +E SCL+SSAI S AV GSKN L+ G + + G L++ V V +GAWI E+GKGGL +ER+EKLEEDLRS+ V+RVLSR EKLG R R TR LKDPI ++A +AQKNSEA RA+AVQ +ILEKE+ EIQ+VLLAMQEQQ KQLDLIL++GK K WE K +T + +TLE +NSAED V+ E HQI Sbjct: 1 MLLTCYHHPFPHSLSSTSTHSLFTTNRNCNLSLSFSIVTSRPLHLTTHTAHRFNSLTVRA-DSFRLRSEHA---------AADSNFDSLLSLLEFSCLLSSAISSAAAAVLAGSKNELIAGIGARAAPFGGALLV---VGVLVGAWIRRRQWRRVSVEAGKGGLEVNLLERIEKLEEDLRSSATVVRVLSRQLEKLGVRFRVTRKGLKDPIAETAALAQKNSEAARALAVQSDILEKELGEIQQVLLAMQEQQRKQLDLILAVGKASKLWESKQETNERHDTLELSNSAEDGVKQ-EVHQI 287
BLAST of Ca_12711 vs. TrEMBL
Match: G7J3P8_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g086990 PE=4 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 3.823e-56 Identity = 126/199 (63.32%), Postives = 149/199 (74.87%), Query Frame = 1 Query: 1 MTLSTSHHLFPHSFCFTRTTIAPAACF----RTSSLNSFGLHRFGSFTTRTTDAFHLKTRESEVYVQKRVVSSDHNFDSLLSAVELSCLVSSAIVSVDLAVNGSKNWLLMVSGNKVSVVWGVLMLMSGVAVGLGAWIXXXXXXXXXXESGKGGLMERVEKLEEDLRSTMRVLRVLSRHAEKLGKRIRGTRHALKDPITQ 585 MTLS SH L PHS FT T AP F +T LNSFGLH F SFTTR FHLK +S+ +QKRV+SS+ NFDSLLSA+ELSCL+SSAIVS+ L NGSKNWLL VSGN++SVVWGVL L++GV V GAWI E+ KGGL+ER+EKLE++LRS +RV+R+LSRHAEKLGKRIRG+ +ALKD ITQ Sbjct: 1 MTLS-SHRLLPHSLSFTTT--APTTFFPTPNQTPKLNSFGLHHFRSFTTRNIHPFHLKAIKSKGDMQKRVISSNLNFDSLLSAMELSCLISSAIVSLVLVGNGSKNWLLNVSGNRISVVWGVLTLVTGVVV--GAWIRTRQWRRISKENMKGGLVERIEKLEKELRSHVRVIRILSRHAEKLGKRIRGSCYALKDHITQ 194
BLAST of Ca_12711 vs. TrEMBL
Match: B9H4S0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_558514 PE=4 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 6.316e-51 Identity = 127/297 (42.76%), Postives = 190/297 (63.97%), Query Frame = 1 Query: 1 MTLST-SHHLFPHS-------FCFTRTTIAPAACFR--TSSLNSFGLHRFGSFTTRTTDAFHLKTRESEVYVQKRVVSSDHNFDSLLSAVELSCLVSSAIVSVDLAVNG--SKNWLLMVSGNKVSVVWGVLMLMSGVAVGLGAWIXXXXXXXXXXESGKGG---LMERVEKLEEDLRSTMRVLRVLSRHAEKLGKRIRGTRHALKDPITQSATVAQKNSEATRAVAVQYEILEKEIREIQKVLLAMQEQQEKQLDLILSLGKPGKPWEIKDKTLKEQNTLETTNSAEDEVEHVEDHQ 846 M+L+T HHLF +S F + ++ + R T+SL+S H F T R + +F LK +S+ ++ +V S+ N D LS EL C++SS+I+++ A+N SK L V G+ WG+++++SGV +G AWI E+G+ G L+ R+EKLE+D+RS+ ++RVLSR EKLG R R TR ALK+PI ++A +AQKNSEATRA+A+Q ILEKE+ E QK+LLAMQEQQ+KQL+LIL++GK GK W+ + + ++EQ ++T++ E V +E H+ Sbjct: 1 MSLATYHHHLFTNSPPRITLLFSSSSLSLRNLSLSRHVTTSLHSSNFH-FKPQTPRNSFSFTLKAYQSDPTIRTQV-SNQFNLDQFLSIAELLCIISSSIITISYALNCTFSKTGALGVIGSNTGFAWGMVVMVSGVVIG--AWIRRRQWWRICRETGREGSLNLVGRIEKLEQDMRSSATIIRVLSRQLEKLGIRFRVTRKALKEPIVETAALAQKNSEATRALALQENILEKELGETQKILLAMQEQQQKQLELILAIGKSGKSWDNRRERVEEQELIKTSDLTEG-VNQLESHE 292
BLAST of Ca_12711 vs. TrEMBL
Match: M5VZD9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009241mg PE=4 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 7.990e-46 Identity = 120/249 (48.19%), Postives = 157/249 (63.05%), Query Frame = 1 Query: 130 TTRTTDAFHLKTRESEVYVQKR-VVSSDHNFDSLLSAVELSCLVSSAIVSVDLAVNGS----KNWLLMVSGNKVSVVWGVLMLMSGVAVGLGAWIXXXXXXXXXXESGKGGL----MERVEKLEEDLRSTMRVLRVLSRHAEKLGKRIRGTRHALKDPITQSATVAQKNSEATRAVAVQYEILEKEIREIQKVLLAMQEQQEKQLDLILSLGKPGKPWEIKDKTLKEQNTLETTNSAEDEVEHVEDHQI 849 T+ ++ L+ ES+ +Q VV+ N D L+ E CL SSAIVSV A+N + K L+ GN V V ++M AVG+GAWI ES KGGL ER+EKLEEDLRS+ ++RVLSR EKLG R R TR ALK+PI ++A +AQKNSEATRA+AVQ + LEKE+ EIQKVLLAMQEQQ+KQL+LIL++ GK E + +EQ+T +S+E++ + E HQI Sbjct: 55 TSLSSHHSRLRVYESDGTLQSNDVVNGAFNLDYFLTVAEFLCLASSAIVSVGFALNCAVLSLKKTALVAMGNSVLASGAVALVM---AVGIGAWIRMRQWRRICRESVKGGLEVNLFERIEKLEEDLRSSATIIRVLSRQLEKLGIRFRVTRKALKEPIAETAALAQKNSEATRALAVQEDNLEKELGEIQKVLLAMQEQQQKQLELILAIATSGKLRESRQVRDQEQSTTIIRDSSEEDSKQKEAHQI 300
BLAST of Ca_12711 vs. TrEMBL
Match: I1KSZ4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.559e-41 Identity = 118/254 (46.46%), Postives = 152/254 (59.84%), Query Frame = 1 Query: 1 MTLSTSHHLFPHSFCFTRT----------TIAPAACFRTSS---LNSFGLHRFGSFTTRTTDAFHLKTRESEVYVQKRVVSSDHNFDSLLSAVELSCLVSSAIVSVDLAV-NGSKNWLLMVSGNKVSVVWGVLMLMSGVAVGLGAWIXXXXXXXXXXESGKGGL----MERVEKLEEDLRSTMRVLRVLSRHAEKLGKRIRGTRHALKDPITQSATVAQKNSEATRAVAVQYEILEKEIREIQKVLLAMQEQQE 708 M L+ HH FPHS T T ++ + TS L + HRF S T R D+F L++ + ++D NFDSLLS +E SCL+SSAI S AV GSKN L+ G + + G L++ V V +GAWI E+GKGGL +ER+EKLEEDLRS+ V+RVLSR EKLG R R TR LKDPI ++A +AQKNSEA RA+AVQ +ILEKE+ EIQ+VLLAMQ +++ Sbjct: 1 MLLTCYHHPFPHSLSSTSTHSLFTTNRNCNLSLSFSIVTSRPLHLTTHTAHRFNSLTVRA-DSFRLRSEHA---------AADSNFDSLLSLLEFSCLLSSAISSAAAAVLAGSKNELIAGIGARAAPFGGALLV---VGVLVGAWIRRRQWRRVSVEAGKGGLEVNLLERIEKLEEDLRSSATVVRVLSRQLEKLGVRFRVTRKGLKDPIAETAALAQKNSEAARALAVQSDILEKELGEIQQVLLAMQVRRD 241
BLAST of Ca_12711 vs. TrEMBL
Match: M1BBS4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400016159 PE=4 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.459e-39 Identity = 113/244 (46.31%), Postives = 154/244 (63.11%), Query Frame = 1 Query: 157 LKTRESEVYVQKRVVSS-DHNFDSLLSAVELSCLVSSAIVSVDLAVN----GSKNWLLMVSGNKVSVVWGVLMLMSGVAVGL----GAWIXXXXXXXXXXESGKGG--LMERVEKLEEDLRSTMRVLRVLSRHAEKLGKRIRGTRHALKDPITQSATVAQKNSEATRAVAVQYEILEKEIREIQKVLLAMQEQQEKQLDLILSLGKPGKPWEIKDKTLKEQN--TLETTNSAEDEVEHVEDHQI 849 +K+ +SE V +V + + NFD LS +E CL+SSA+V++ AVN GS+ WL GN+V V+ L+ GV +G W S G L+ER+EK+EEDLRS+ ++RVLSR EKLG R R TR LKDPIT++A +AQKNSEATRA+A+Q E LEKE+ EIQKVLLAMQ+QQ KQL+LIL++GK GK +E K ++ N + + +N+A D + +QI Sbjct: 61 VKSFDSEGTVNGQVSAEYEFNFDGFLSILEFLCLLSSAVVAIGFAVNSWVLGSQKWL----GNRVLAAQCVV-LVGGVIIGSVIRRRQWRRICMNKFSRSGSDLKGVNLLERIEKVEEDLRSSATIIRVLSRQLEKLGIRFRVTRKTLKDPITEAAMLAQKNSEATRALALQDERLEKELGEIQKVLLAMQDQQHKQLELILAIGKTGKLFENKRGLSQDPNKKSNDVSNTAADGFPQLGVNQI 299
BLAST of Ca_12711 vs. TrEMBL
Match: K4D5G7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc11g009070.1 PE=4 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.489e-39 Identity = 112/244 (45.90%), Postives = 153/244 (62.70%), Query Frame = 1 Query: 157 LKTRESEVYVQKRVVSS-DHNFDSLLSAVELSCLVSSAIVSVDLAVN----GSKNWLLMVSGNKVSVVWGVLMLMSGVAVGL----GAWIXXXXXXXXXXESGKGG--LMERVEKLEEDLRSTMRVLRVLSRHAEKLGKRIRGTRHALKDPITQSATVAQKNSEATRAVAVQYEILEKEIREIQKVLLAMQEQQEKQLDLILSLGKPGKPWEIKDKTLKE--QNTLETTNSAEDEVEHVEDHQI 849 +K+ +SE V +V + + NFD LS +E CL+SSA+V++ AVN GS WL GN+V V+ L+ GV +G W S G ++ER+EK+EEDLRS+ ++RVLSR EKLG R R TR LKDPIT++A +AQKNSEATRA+A+Q E LEKE+ E+QKVLLAMQ+QQ KQL+LIL++GK GK +E K ++ Q T + +N+A D + +QI Sbjct: 61 VKSFDSEGTVNGQVSAEYEFNFDGFLSILEFLCLLSSAVVAIGFAVNCWFLGSHKWL----GNRVLAAQCVV-LVGGVIIGSVIRRRQWRRICMNNFSRPGSDLKGVNMLERIEKVEEDLRSSATIIRVLSRQLEKLGIRFRVTRKTLKDPITEAAMLAQKNSEATRALALQGERLEKELGEVQKVLLAMQDQQHKQLELILAIGKTGKLFENKRGPSQDPNQKTNDMSNTAADGFPQLGVNQI 299
BLAST of Ca_12711 vs. TrEMBL
Match: B9HFE5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_562573 PE=4 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 8.854e-37 Identity = 109/263 (41.44%), Postives = 155/263 (58.94%), Query Frame = 1 Query: 1 MTLSTSHH-----LF---PH--SFCFTRTTIA----PAACFRTSSLNSFGLHRFGSFTTRTTDAFHLKTRESEVYVQKRVVSSDHNFDSLLSAVELSCLVSSAIVSVDLAVN----GSKNWLLMVSGNKVSVVWGVLMLMSGVAVGLGAWIXXXXXXXXXXESGKGG------LMERVEKLEEDLRSTMRVLRVLSRHAEKLGKRIRGTRHALKDPITQSATVAQKNSEATRAVAVQYEILEKEIREIQKVLLAMQEQQEKQL 717 M+L+T HH LF PH + FT T+++ + +SL+S H F T +++ LK +S+ + + S N D LS EL C+ SS+I+++ A+N SK +L V G+ WG+++++SGV +G AWI E+G+ G L+ R+EKLEEDLRS+ ++RVLSR EKLG R R TR ALK+PI ++A +AQKNS+ATRA+AVQ +ILEKE+ EIQKVLLAMQ +L Sbjct: 1 MSLTTYHHHHHHLLFNNSPHRITLLFTSTSLSLRNLTLSRHVNTSLHSHNFH-FKPQTPKSSFNLTLKAYQSDPTIPTQD-SKQFNLDHFLSVAELLCIFSSSIITISYALNYTVLNSKRGVLGVIGSNTGFAWGMVVMVSGVVIG--AWIRRRMWWRVSRETGREGSRESLNLVGRIEKLEEDLRSSATIIRVLSRQLEKLGIRFRVTRKALKEPIAETAALAQKNSDATRALAVQEDILEKELGEIQKVLLAMQVSSADRL 259
BLAST of Ca_12711 vs. TrEMBL
Match: M4E6G6_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra024370 PE=4 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.576e-36 Identity = 99/209 (47.37%), Postives = 134/209 (64.11%), Query Frame = 1 Query: 214 NFDSLLSAVELSCLVSSAIVSVDLAVNGSKNWLLMVSGNKVSVVWGVLMLMSGVAVGLGAWIXXXXXXXXXXESGKG---GLMERVEKLEEDLRSTMRVLRVLSRHAEKLGKRIRGTRHALKDPITQSATVAQKNSEATRAVAVQYEILEKEIREIQKVLLAMQEQQEKQLDLILSLGKPGK-----------PWEIKDKTLKEQNTLE 798 +F S +S E C++SSA++SV LAVN + + G KV + V +L S V G+W+ + +G L+ R+EKLEEDL+++ ++RVLSRH EKLG R R TR ALK+P++++A +AQKNSEATR +A Q EILEKE+ EIQKVLLAMQ+QQ KQL+LIL++ K GK P E KDKT +E +T E Sbjct: 85 DFSSFVSFAEAVCILSSAVISVVLAVNYAAVGEI---GKKVLSLGFVGLLCS---VASGSWLRRRQWMRICKGTREGEGTNLIRRLEKLEEDLKTSTNIVRVLSRHLEKLGIRFRVTRKALKEPVSETAALAQKNSEATRVIAAQQEILEKELGEIQKVLLAMQDQQRKQLELILTIAKNGKLFESSTSSRKAPNEEKDKTAEEPSTSE 287 The following BLAST results are available for this feature:
BLAST of Ca_12711 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_12711 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_12711_v1.0_kabuli ID=Ca_12711_v1.0_kabuli; Name=Ca_12711; organism=Cicer arietinum; type=mRNA; length=852bpback to top protein sequence of Ca_12711_v1.0_kabuli >Ca_12711_v1.0_kabuli ID=Ca_12711_v1.0_kabuli; Name=Ca_12711_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=283bpback to top mRNA from alignment at Ca5:43434562..43436667+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_12711_v1.0_kabuli ID=Ca_12711_v1.0_kabuli; Name=Ca_12711; organism=Cicer arietinum; type=mRNA; length=2106bp; location=Sequence derived from: Ca5:43434562..43436667+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:43434562..43436667+ >Ca_12711_v1.0_kabuli ID=Ca_12711_v1.0_kabuli; Name=Ca_12711; organism=Cicer arietinum; type=CDS; length=852bp; location=Sequence derived from: Ca5:43434562..43436667+ (Cicer arietinumback to top |