Ca_12724, Ca_12724_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_12724 vs. SwissProt
Match: MIZ1_ARATH (Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana GN=MIZ1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.279e-20 Identity = 74/223 (33.18%), Postives = 110/223 (49.33%), Query Frame = 1 Query: 88 LLRSLIQLL-IPTCNCTLVQQDHNTKSK------NCLPXXXXXXXXXXXXXXFGYRKGKVSFCIQSNSNSTNPILLLELAIPTSVLAEEMRGGTLRIVLESATXXXXXXXXXXXXXXXTPLWIMYCNGRKVGYAVKR--RPSRNDFEALSLMRSVSVGTGVI---------NGKEIHQEDDELMYLRANFQRVRVSSKSNCESFHLIDPEGSIGQELSIFFFR 702 LLRS I ++ IP C + ++ S + + +G+++G V+F +Q N S +P+LLL+LA+ T+ L +EM G +RI LE P W MYCNGRK GYAV R + D+ L+ + V+VG GVI +G E EL+Y+R F+RV S S E+F++++P+ + G ELSIF R Sbjct: 82 LLRSFINIINIPACKMLSLPSPPSSSSSVSNQLISLVTGGSSSLGRRVTGTLYGHKRGHVTFSVQYNQRS-DPVLLLDLAMSTATLVKEMSSGLVRIALECEKRHRSGTKLFQE-----PKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVSRVTVGAGVIPTPKTIDDVSGVGSGTELGELLYMRGKFERVVGSRDS--EAFYMMNPDKNGGPELSIFLLR 296
BLAST of Ca_12724 vs. TrEMBL
Match: G7J372_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g086740 PE=4 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 3.939e-92 Identity = 183/245 (74.69%), Postives = 198/245 (80.82%), Query Frame = 1 Query: 1 MSYITKVGGSSMTNGVTTVDCHKQVRSWRLLRSLIQLLIPTCNCTLVQQD-------HNTKSKNCLPXXXXXXXXXXXXXX--FGYRKGKVSFCIQSNSNSTNPILLLELAIPTSVLAEEMRGGTLRIVLESATXXXXXXXXXXXXXXXTPLWIMYCNGRKVGYAVKRRPSRNDFEALSLMRSVSVGTGVINGKEIHQEDDELMYLRANFQRVRVSSKSNCESFHLIDPEGSIGQELSIFFFRSR 708 M+YITKVG SSMTNGVTTVDC KQVRSWRLLRSLI+LLIPTCNCTLV+QD H+ ++ N P FGYRKGKVSFCIQS+SNSTNPILLLELAIPTSVLA+EMRGGTLRIVLESAT TPLWIMYCNGRKVGY+VKR+PSR+D EAL+LMRSVSVGTGVINGKEI QEDD+LMYLRANFQRVR SSKSNCESFHLIDPEGSIGQELSIFFF+S+ Sbjct: 1 MAYITKVGSSSMTNGVTTVDCQKQVRSWRLLRSLIELLIPTCNCTLVEQDQDISNSKHSHQNYNKYPSSHSSLMTSTTITGTIFGYRKGKVSFCIQSSSNSTNPILLLELAIPTSVLAKEMRGGTLRIVLESATSGSCNNNSNLFS---TPLWIMYCNGRKVGYSVKRKPSRSDLEALNLMRSVSVGTGVINGKEICQEDDQLMYLRANFQRVRGSSKSNCESFHLIDPEGSIGQELSIFFFQSK 242
BLAST of Ca_12724 vs. TrEMBL
Match: I1LNH2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 3.579e-77 Identity = 164/245 (66.94%), Postives = 180/245 (73.47%), Query Frame = 1 Query: 1 MSYI-TKVGGSSMTNGVTTVDCHKQVRSWRLLRSLIQLLIPTCNCTLVQQDHNTKSKNCLPXXXXXXXXXXXXXX------FGYRKGKVSFCIQSNSNSTNPILLLELAIPTSVLAEEMRGGTLRIVLESAT---XXXXXXXXXXXXXXXTPLWIMYCNGRKVGYAVKRRPSRNDFEALSLMRSVSVGTGVINGKEIHQEDDELMYLRANFQRVRVSSKSNCESFHLIDPEGSIGQELSIFFFRS 705 M+YI T VG SS VTTVDC KQVRSWRLLRSL++LLIPTCNCT V+++ N + CL FGYRKGKVSFCIQ+N+NS+NPILLLELA+PTSVLA+EMRGGTLRIVLES+T TPLW MYCNGRKVGYAVKRRPS DFEALSLMRSV+VGTGVIN +E DE+MYLRANFQRVR S SNCESFHLIDPEGSIGQELSIFFFRS Sbjct: 1 MAYIATTVGASS----VTTVDCQKQVRSWRLLRSLVELLIPTCNCTFVEEEENQSPQKCLQNHPQQQQLMMTTSTTITGTIFGYRKGKVSFCIQANANSSNPILLLELALPTSVLAKEMRGGTLRIVLESSTTTGTCSNNVNNNNNNLFSTPLWSMYCNGRKVGYAVKRRPSNGDFEALSLMRSVAVGTGVINSSCCSKE-DEIMYLRANFQRVRGS--SNCESFHLIDPEGSIGQELSIFFFRS 238
BLAST of Ca_12724 vs. TrEMBL
Match: I1K4G3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 270.396 bits (690), Expect = 3.245e-70 Identity = 147/237 (62.03%), Postives = 166/237 (70.04%), Query Frame = 1 Query: 34 MTNGVTTVDCHKQVRSWRLLRSLIQLLIPTCNCTLVQQD------------HNTKSKNCLPXXXXXXXXXXXXXX-FGYRKGKVSFCIQSNSNSTNPILLLELAIPTSVLAEEMRGGTLRIVLESATXXXXXXXXXXXXXXXTPLWIMYCNGRKVGYAVKRRPSRNDFEALSLMRSVSVGTGVINGKE-IHQEDDELMYLRANFQRVRVSSKSNCESFHLIDPEGSIGQELSIFFFR 702 M +GVTTVDC KQVRSWRL+RSL+QLLIPTCNC + +D NT P FGYR+GKVSFCIQ+N+NSTNPILLLELA+PT++LA+EMRGGTLRI LES TPLW MYCNGRKVGYAVKRRPS DFEAL LMRSV VGTGV+ KE +++EDD+LMYLRA+FQRVR S NCESFHLIDPEG I QELS+FFFR Sbjct: 1 MASGVTTVDCEKQVRSWRLIRSLMQLLIPTCNCATIIEDGQDVTTTTNETLRNTSKYTYSPSSSLMSSTTNITGTIFGYRRGKVSFCIQANANSTNPILLLELAVPTTILAKEMRGGTLRIALESGN-DDDDGDGQVDTLLSTPLWTMYCNGRKVGYAVKRRPSNTDFEALRLMRSVVVGTGVMKCKELVNKEDDQLMYLRASFQRVRGS--DNCESFHLIDPEGDIDQELSVFFFR 234
BLAST of Ca_12724 vs. TrEMBL
Match: I1MYN5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 258.84 bits (660), Expect = 9.769e-67 Identity = 150/238 (63.03%), Postives = 166/238 (69.75%), Query Frame = 1 Query: 1 MSYI--TKVGGSSMTNGVTTVDCHKQVRSWRLLRSLIQLLIPTCNCTLVQQDHNTKSKNCLPXXXXXXXXXXXXXXFGYRKGKVSFCIQSNSNSTNPILLLELAIPTSVLAEEMRGGTLRIVLESATXXXXXXXXXXXXXXXTPLWIMYCNGRKVGYAVKRRPSRNDFEALSLMRSVSVGTGVINGKEIHQEDDELMYLRANFQRVRVSSKSNCESFHLIDPEGSIGQELSIFFFRSR 708 M+YI T VG SS VTTVDC KQVRSWRLLRSL++ LIPTCNCT V++++ + FGYRKGKVSFCIQ+N+NS+NPILLLEL +PTSVLA+EMRGGTLRIVLES TPLW MYCNGRKVGYAVK LSLMRSV+VGTGVIN ++DELMYLRANFQRVR S SNCESFHLIDPEGSIGQELSIFFFR R Sbjct: 1 MAYIATTTVGASS----VTTVDCQKQVRSWRLLRSLMEFLIPTCNCTFVEEENQPQKCLQKHPQQLMTSTTITGTIFGYRKGKVSFCIQANANSSNPILLLELEVPTSVLAKEMRGGTLRIVLESGN-------NNNLNLFSTPLWSMYCNGRKVGYAVK---------PLSLMRSVAVGTGVINS----CKEDELMYLRANFQRVRGS--SNCESFHLIDPEGSIGQELSIFFFRPR 212
BLAST of Ca_12724 vs. TrEMBL
Match: I1KSY0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 2.176e-66 Identity = 145/246 (58.94%), Postives = 164/246 (66.67%), Query Frame = 1 Query: 34 MTNGVTTVDCHKQVRSWRLLRSLIQLLIPTCNCTLVQQD------------HNTKSK-----NCLPXXXXXXXXXXXXXXFGYRKGKVSFCIQSNSNSTNPILLLELAIPTSVLAEEMRGGTLRIVLESATXXXXXXXXXXXXXXXTPLWIMYCNGRKVGYAVKRRPSRNDFEALSLMRSVSVGTGVINGKEI-----HQEDDELMYLRANFQRVRVSSKSNCESFHLIDPEGSIGQELSIFFFRS 705 M +GVTTVDC KQVRSWRLLRSL+QLLIPTCNC + +D NT+SK FGYR+GKVSFCIQ+N+NS NPILLLELA+PT++LA+EMRG TLRI LES TPLW MYCNGRKV YAVKRRPS DFEAL LM SV VGTGV+ KE+ +EDD+LMYLRA+F+RVR S NCESFHLIDPEG I QELS+FFFRS Sbjct: 1 MASGVTTVDCEKQVRSWRLLRSLMQLLIPTCNCATIIEDDQDLTTTTNETLRNTRSKYYNYYTPSSSSLMSSTTNITGTIFGYRRGKVSFCIQANANSNNPILLLELAVPTAILAKEMRGATLRIALESG-RGDGDDDGKADTLLSTPLWTMYCNGRKVRYAVKRRPSNTDFEALRLMGSVVVGTGVMKCKELVSWKKLEEDDQLMYLRASFKRVRGS--DNCESFHLIDPEGDIDQELSVFFFRS 243
BLAST of Ca_12724 vs. TrEMBL
Match: D7UE73_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0477g00060 PE=4 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 2.406e-65 Identity = 139/241 (57.68%), Postives = 165/241 (68.46%), Query Frame = 1 Query: 1 MSYITKVGGSSMTNGVTTVDCHKQVRSWRLLRSLIQLLIPTCNCTLVQQDHNTKSKNCL-----PXXXXXXXXXXXXXXFGYRKGKVSFCIQSNSNSTNPILLLELAIPTSVLAEEMRGGTLRIVLESATXXXXXXXXXXXXXXXTPLWIMYCNGRKVGYAVKRRPSRNDFEALSLMRSVSVGTGVINGKEIHQEDDELMYLRANFQRVRVSSKSNCESFHLIDPEGSIGQELSIFFFRSR 708 MSY VG +++ NGVTTVDC KQVRSWRLLRSL++LLIP CNC +++ H + +N L FGYR+GKVSFC Q+NS STNPILLLELA+PT++LA EM+GG LRI LES P+W M CNGRKVG+AVKR PS+ D L LM SV VG G+I+ KE++ DDELMYLRANF+RVR S SN ESFHLIDP+G+IGQEL IFFFRSR Sbjct: 1 MSYDPTVGSTNIVNGVTTVDCQKQVRSWRLLRSLMELLIPRCNCISLEE-HRIEEENYLHRYFYSQPTFISSTVVTGTIFGYRRGKVSFCTQTNSKSTNPILLLELAVPTAILAREMQGGILRITLESIA---AKNGMDSYTLLSIPVWTMCCNGRKVGFAVKRTPSKADMNVLGLMGSVIVGAGIISAKELNC-DDELMYLRANFERVR--SSSNSESFHLIDPDGNIGQELGIFFFRSR 234
BLAST of Ca_12724 vs. TrEMBL
Match: A5B2F3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016764 PE=3 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 2.406e-65 Identity = 139/241 (57.68%), Postives = 165/241 (68.46%), Query Frame = 1 Query: 1 MSYITKVGGSSMTNGVTTVDCHKQVRSWRLLRSLIQLLIPTCNCTLVQQDHNTKSKNCL-----PXXXXXXXXXXXXXXFGYRKGKVSFCIQSNSNSTNPILLLELAIPTSVLAEEMRGGTLRIVLESATXXXXXXXXXXXXXXXTPLWIMYCNGRKVGYAVKRRPSRNDFEALSLMRSVSVGTGVINGKEIHQEDDELMYLRANFQRVRVSSKSNCESFHLIDPEGSIGQELSIFFFRSR 708 MSY VG +++ NGVTTVDC KQVRSWRLLRSL++LLIP CNC +++ H + +N L FGYR+GKVSFC Q+NS STNPILLLELA+PT++LA EM+GG LRI LES P+W M CNGRKVG+AVKR PS+ D L LM SV VG G+I+ KE++ DDELMYLRANF+RVR S SN ESFHLIDP+G+IGQEL IFFFRSR Sbjct: 1 MSYDPTVGSTNIVNGVTTVDCQKQVRSWRLLRSLMELLIPRCNCISLEE-HRIEEENYLHRYFYSQPTFISSTVVTGTIFGYRRGKVSFCTQTNSKSTNPILLLELAVPTAILAREMQGGILRITLESIA---AKNGMDSYTLLSIPVWTMCCNGRKVGFAVKRTPSKADMNVLGLMGSVIVGAGIISAKELNC-DDELMYLRANFERVR--SSSNSESFHLIDPDGNIGQELGIFFFRSR 234
BLAST of Ca_12724 vs. TrEMBL
Match: M5WCI4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010574mg PE=4 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 1.724e-63 Identity = 138/247 (55.87%), Postives = 167/247 (67.61%), Query Frame = 1 Query: 16 KVGGSSMTNGVTTVDCHKQVRSWRLLRSLIQLLIPTCNCTLV-----------QQDHNTKSKNCL-----PXXXXXXXXXXXXXXFGYRKGKVSFCIQSNSNSTNPILLLELAIPTSVLAEEMRGGTLRIVLESATXXXXXXXXXXXXXXXTPLWIMYCNGRKVGYAVKRRPSRNDFEALSLMRSVSVGTGVINGKEIHQEDDELMYLRANFQRVRVSSKSNCESFHLIDPEGSIGQELSIFFFRSR 708 +VG +++T GVTTVDC KQVRSWRLLRSLI+LLIPTCNCT + Q+ + + N FGYR+GKVSFCIQ+NS S NPILLLELA+PT+VLA+EM+GG LRI LES T TP+W MYCN RKVGYA+KRRPS +D+EAL +M SV VG G+I+G ++EDDE+MYLRANF+ RV +N ESFHLIDP+ SIGQELSIF +RSR Sbjct: 5 RVGATTITTGVTTVDCQKQVRSWRLLRSLIELLIPTCNCTFIEDHDQDQLQAKQEQQKSHANNYYYPHYPQPSFACSNNIITGTIFGYRRGKVSFCIQTNSKS-NPILLLELALPTTVLAKEMQGGFLRIALES-TSPGNGASTNSNSLLATPVWTMYCNSRKVGYAIKRRPSEHDWEALRMMGSVVVGAGIISG---NKEDDEIMYLRANFE--RVCGSANSESFHLIDPDESIGQELSIFLYRSR 244
BLAST of Ca_12724 vs. TrEMBL
Match: K4D5J7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc11g010360.1 PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 9.792e-59 Identity = 125/229 (54.59%), Postives = 155/229 (67.69%), Query Frame = 1 Query: 37 TNGVTTVDCHKQVRSWRLLRSLIQLLIPTCNCTLVQQDHNTKSK----NCLPXXXXXXXXXXXXXXFGYRKGKVSFCIQSNSNSTNPILLLELAIPTSVLAEEMRGGTLRIVLESATXXXXXXXXXXXXXXXTPLWIMYCNGRKVGYAVKRRPSRNDFEALSLMRSVSVGTGVINGKEIHQEDDELMYLRANFQRVRVSSKSNCESFHLIDPEGSIG-QELSIFFFRSR 708 T +TTVDC KQVRSWRLLRSL++LLIP+C CT V+ +K N FGYRKGKV+FCIQ+N NS+ P+LLLELA+ TS LA EMRGG LRI LES+ P+W MYCNG+KVG+AVK++P+++D + L+ M SV VG G I+GKEI++ DD++MYLR F+RV SS S ESFHLIDPEGS+G Q+LSIFF RSR Sbjct: 8 TATITTVDCEKQVRSWRLLRSLVELLIPSCYCTFVEPTEPVLTKKPSFNYHRPSYTSNTTNITGTIFGYRKGKVNFCIQTNPNSSTPLLLLELAVSTSTLAREMRGGLLRIALESSNNEGGSGNNENSSLLSMPVWTMYCNGKKVGFAVKKKPTKSDLQVLNQMESVVVGAGTIHGKEINR-DDDIMYLRGKFERVHGSSDS--ESFHLIDPEGSMGQQQLSIFFLRSR 233
BLAST of Ca_12724 vs. TrEMBL
Match: M1BBP3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400016144 PE=4 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 3.721e-58 Identity = 125/234 (53.42%), Postives = 156/234 (66.67%), Query Frame = 1 Query: 28 SSMTNGVTTVDCHKQVRSWRLLRSLIQLLIPTCNCTLVQQDHNTKSK------NCLPXXXXXXXXXXXXXXFGYRKGKVSFCIQSNSNSTNPILLLELAIPTSVLAEEMRGGTLRIVLESATXXXXXXXXXXXXXXXTPLWIMYCNGRKVGYAVKRRPSRNDFEALSLMRSVSVGTGVINGKEIHQEDDELMYLRANFQRVRVSSKSNCESFHLIDPEGSIG-QELSIFFFRSR 708 S+ T +TTVDC KQVRSWRLLRSL++LLIP+C CT V+ SK N FGYRKGKV+FCIQ+N NS+ P+LLLELA+ TS LA EMRGG LRI LES+ +W MYCNG+KVG+AVK++P+++D + L+ M SV VG G ++GKEI++ DD++MYLR F+RV SS S ESFHLIDPEGS+G Q+LSIFF RSR Sbjct: 7 SAATATITTVDCEKQVRSWRLLRSLVELLIPSCYCTFVEPTKLVPSKKPVSSFNYHRPSFTSNTTNITGTIFGYRKGKVNFCIQTNPNSSTPLLLLELAVSTSTLAREMRGGLLRIALESSNNGGGSGNNDNSSLLSMSVWTMYCNGKKVGFAVKKKPTKSDLQVLNQMESVVVGAGTVHGKEINR-DDDIMYLRGKFERVHGSSDS--ESFHLIDPEGSMGQQQLSIFFLRSR 237
BLAST of Ca_12724 vs. DB:Swiss
Match: MIZ1_ARATH (Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana OX=3702 GN=MIZ1 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 7.525e-26 Identity = 67/171 (39.18%), Postives = 98/171 (57.31%), Query Frame = 1 Query: 223 FGYRKGKVSFCIQSNSNSTNPILLLELAIPTSVLAEEMRGGTLRIVLESATXXXXXXXXXXXXXXXTPLWIMYCNGRKVGYAVKRRPS--RNDFEALSLMRSVSVGTGVI---------NGKEIHQEDDELMYLRANFQRVRVSSKSNCESFHLIDPEGSIGQELSIFFFR 702 +G+++G V+F +Q N S +P+LLL+LA+ T+ L +EM G +RI LE + + LF P W MYCNGRK GYAV R + D+ L+ + V+VG GVI +G E EL+Y+R F+RV S S E+F++++P+ + G ELSIF R Sbjct: 134 YGHKRGHVTFSVQYNQRS-DPVLLLDLAMSTATLVKEMSSGLVRIALECE-----KRHRSGTKLFQEPKWTMYCNGRKCGYAVSRGGACTDTDWRVLNTVSRVTVGAGVIPTPKTIDDVSGVGSGTELGELLYMRGKFERVVGSRDS--EAFYMMNPDKNGGPELSIFLLR 296 The following BLAST results are available for this feature:
BLAST of Ca_12724 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot) Total hits: 1
BLAST of Ca_12724 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_12724 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_12724_v1.0_kabuli ID=Ca_12724_v1.0_kabuli; Name=Ca_12724; organism=Cicer arietinum; type=mRNA; length=711bpback to top protein sequence of Ca_12724_v1.0_kabuli >Ca_12724_v1.0_kabuli ID=Ca_12724_v1.0_kabuli; Name=Ca_12724_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=236bpback to top mRNA from alignment at Ca5:43326626..43327336+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_12724_v1.0_kabuli ID=Ca_12724_v1.0_kabuli; Name=Ca_12724; organism=Cicer arietinum; type=mRNA; length=711bp; location=Sequence derived from: Ca5:43326626..43327336+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:43326626..43327336+ >Ca_12724_v1.0_kabuli ID=Ca_12724_v1.0_kabuli; Name=Ca_12724; organism=Cicer arietinum; type=CDS; length=711bp; location=Sequence derived from: Ca5:43326626..43327336+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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