Ca_12737, Ca_12737_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_12737 vs. TrEMBL
Match: G7J343_MEDTR (Endoglucanase OS=Medicago truncatula GN=MTR_3g086450 PE=4 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 5.631e-57 Identity = 129/245 (52.65%), Postives = 145/245 (59.18%), Query Frame = 1 Query: 28 AEAVHGANPNVLVILSGLNFDTDLSF----------NGKLVFEEHWYSFGDTQSWTLGNPNQVCEQVTRNF---------------------------MNQNKFLNCFMAVAAELDLDWASWTLFGGFYIREGVVAADQSFGILNWNWSKEQAYHKLNHL-------------------VIFHPLSGFCILRKLLVDPLKLGPCFR---WLEYTAQKKLLVKGT--------EGKEAKLGTTCSG 561 AE VH AN NVLVILSGLNFDTDLSF NGKLVFEEHWYSF D+Q+WTL NPNQVC QVT +F MNQN+F NCFMAVAAELDLDWA WTL G +YIR+GVV D++FGILN NWS+ + L + VIFHPL G C+L K L +PLK+GPC W EYT Q LL+KGT EGK+ KLGTTCSG Sbjct: 217 AEVVHAANSNVLVILSGLNFDTDLSFITNQPVKLTFNGKLVFEEHWYSFSDSQAWTLENPNQVCGQVTSSFVRNSGFLLDQGWPLFVSEFGLDLRGKNMNQNRFFNCFMAVAAELDLDWAYWTLSGSYYIRQGVVDVDETFGILNGNWSQVRNTSFLQRISAIQHPFQGPGLLESEPYKVIFHPLRGLCVLSKSLHEPLKMGPCSNSDGW-EYTPQNILLLKGTKFCLQGEGEGKQVKLGTTCSG 460
BLAST of Ca_12737 vs. TrEMBL
Match: I1LKM8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 204.142 bits (518), Expect = 1.754e-50 Identity = 121/246 (49.19%), Postives = 141/246 (57.32%), Query Frame = 1 Query: 28 AEAVHGANPNVLVILSGLNFDTDLSF----------NGKLVFEEHWYSFGDTQSWTLGNPNQVCEQVTRNFM---------------------------NQNKFLNCFMAVAAELDLDWASWTLFGGFYIREGVVAADQSFGILNWNWSKEQAYHKLNHL-------------------VIFHPLSGFCILRKLLVDPL-KLGPCFR---WLEYTAQKKLLVKGT--------EGKEAKLGTTCSG 561 AEAVH ANP+VLVILSGLNFDT+LSF NGKLVFE HWYSF D Q+WTLGNPNQVC QVT N M N N++LNCFMA+ A+LDLDWA WTL G +YIR+G V ++ FGILN +W + + L + VIFHPL+G CILR V+PL +LGPC W EYT QK L +KGT EGK+AKLG CSG Sbjct: 227 AEAVHAANPDVLVILSGLNFDTNLSFIRNEAVKLSFNGKLVFEVHWYSFSDGQAWTLGNPNQVCGQVTENVMRRAGFLLDQGWPLFVSEFGVDLRGTSVNDNRYLNCFMALVAQLDLDWALWTLGGNYYIRQGDVGMEEYFGILNSDWIQVRNTSFLQRISAIQLPFKGPGLSEAKPYKVIFHPLTGLCILRNSPVEPLMRLGPCSNSDAW-EYTDQKILSIKGTYFCLQAEEEGKQAKLGNACSG 471
BLAST of Ca_12737 vs. TrEMBL
Match: K7KQT2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.940e-49 Identity = 111/244 (45.49%), Postives = 139/244 (56.97%), Query Frame = 1 Query: 28 AEAVHGANPNVLVILSGLNFDTDLSF----------NGKLVFEEHWYSFGDTQSWTLGNPNQVCEQVTRNFM---------------------------NQNKFLNCFMAVAAELDLDWASWTLFGGFYIREGVVAADQSFGILNWNWSKEQAYHKLNHL-------------------VIFHPLSGFCILRKLLVDPLKLGPCF---RWLEYTAQKKLLVKGT--------EGKEAKLGTTCS 558 AEA+H ANP+VLVILSGLNFD DLSF GKLV+E HWY+F D Q+W GNPNQVC QV N M N N++LNCF+AVAAELDLDWA WTL G +Y R+GV+ ++ +GIL+W+W++ + LN + +IFHPL+G C++RK L+DPL LGPC+ W +YT QK L +KGT EG AKLG CS Sbjct: 230 AEAIHAANPDVLVILSGLNFDKDLSFIQNRPVSLTFKGKLVYEAHWYAFTDGQAWVNGNPNQVCGQVAGNMMRTSGFLVNQGWPLFISEFGGDLRGTNVNDNRYLNCFLAVAAELDLDWALWTLVGSYYFRQGVIGMEEFYGILSWDWTQVRNTTFLNRISALQLPFRGPGITRGNPYKLIFHPLTGLCVIRKSLLDPLTLGPCYLSDGW-KYTPQKILSIKGTYFCIQAENEGMPAKLGIICS 472
BLAST of Ca_12737 vs. TrEMBL
Match: B9RMT6_RICCO (Hydrolase, hydrolyzing O-glycosyl compounds, putative OS=Ricinus communis GN=RCOM_1083710 PE=4 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.218e-43 Identity = 102/248 (41.13%), Postives = 131/248 (52.82%), Query Frame = 1 Query: 28 AEAVHGANPNVLVILSGLNFDTD----------LSFNGKLVFEEHWYSFGDTQSWTLGNPNQVCEQVTRNFM---------------------------NQNKFLNCFMAVAAELDLDWASWTLFGGFYIREGVVAADQSFGILNWNWSKEQAYHKLN-------------------HLVIFHPLSGFCILRKLLVDPLKLGPCF---RWLEYTAQKKLLVKGTE--------GKEAKLGTTCSGVTN 570 AEAVH ANP+VLVILSGLN+D D LSF GK+VFE HWY F D Q+W GNPNQVC +V N M N N++L CF+ VAAELD DWA WTL G +Y+R+GV+ ++ +G+LNWNW + L H VIFHP +G C+ RK +++PL+LG C W YT++ L ++GT GK AKLG C+ T+ Sbjct: 229 AEAVHSANPDVLVILSGLNYDKDFSFLRNRPVNLSFTGKVVFEVHWYGFSDGQAWRSGNPNQVCGRVVDNLMRISGFLLEQGWPMFVSEFGVDQRGTNVNDNRYLGCFIGVAAELDWDWALWTLVGSYYLRQGVIGLNEYYGVLNWNWCDVRNSSFLQQISALQSPFQGPGLSETNPHKVIFHPSTGLCVQRKSMLEPLRLGSCTDSEAW-RYTSENTLTLRGTYFCLQADELGKPAKLGIICTDSTS 475
BLAST of Ca_12737 vs. TrEMBL
Match: B9HTQ3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_769062 PE=4 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.591e-43 Identity = 103/244 (42.21%), Postives = 131/244 (53.69%), Query Frame = 1 Query: 28 AEAVHGANPNVLVILSGLNFDTDLSF----------NGKLVFEEHWYSFGDTQSWTLGNPNQVCEQVTRNFM---------------------------NQNKFLNCFMAVAAELDLDWASWTLFGGFYIREGVVAADQSFGILNWNWSKEQAYHKLN-------------------HLVIFHPLSGFCILRKLLVDPLKLGPCFR---WLEYTAQKKLLVKGT--------EGKEAKLGTTCS 558 AEAVH ANP+V+VILSGLN+D DLSF +GK+VFE HWY F D ++W GN NQVC +V N M N N++L CF++VAAELDLDWA WTL G +Y+R+GV+ ++ +G+LNWNW + + L H VIFHP +G C+LRK ++ PL+LG C W YT QK L VKGT K AKLG C+ Sbjct: 200 AEAVHSANPDVIVILSGLNYDKDLSFLRNRPVHLTFSGKIVFEVHWYGFTDGEAWKSGNSNQVCGRVVDNMMRVSGFLLDQGWPLFVSEFGVDQRGTNVNDNRYLGCFLSVAAELDLDWALWTLVGSYYLRQGVIGMNEYYGVLNWNWREVRNSTFLQLISALQSPFRGPGLSEANPHKVIFHPSTGLCVLRKSMLAPLRLGRCTESEAW-SYTPQKILSVKGTYFCLQTDDAAKPAKLGIICT 442
BLAST of Ca_12737 vs. TrEMBL
Match: B9HLD8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1085600 PE=4 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.031e-42 Identity = 103/244 (42.21%), Postives = 129/244 (52.87%), Query Frame = 1 Query: 28 AEAVHGANPNVLVILSGLNFDTDLSF----------NGKLVFEEHWYSFGDTQSWTLGNPNQVCEQVTRNFM---------------------------NQNKFLNCFMAVAAELDLDWASWTLFGGFYIREGVVAADQSFGILNWNWSKEQAYHKLN-------------------HLVIFHPLSGFCILRKLLVDPLKLGPCFR---WLEYTAQKKLLVKGTE--------GKEAKLGTTCS 558 AEAVH ANP+V+VILSGLN+D DLSF + K+VFE HWY F D Q+W GNPNQVC +V N M N N++L CF+ VAAELD DWA WTL G +Y R+GV+ ++ +G+LN NW + + L H VIFHP +G C+LRK + +PL+LGPC + W YT QK L VKGT K AKLG C+ Sbjct: 207 AEAVHSANPDVIVILSGLNYDKDLSFLRNRPVNLTFSRKIVFEVHWYGFTDGQAWKNGNPNQVCGRVVDNMMRISGFLLDQGWPLFMSEFGVDQRGTNVNDNRYLGCFLGVAAELDFDWALWTLVGSYYFRQGVIGMNEYYGVLNSNWRETRNSTFLQQISALQSPFRGPGVSEVHLHKVIFHPSTGLCVLRKSMFEPLRLGPCTQSEAW-NYTPQKILSVKGTYFCLQTDELAKPAKLGIICT 449
BLAST of Ca_12737 vs. TrEMBL
Match: M1AKP2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009602 PE=4 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 6.682e-42 Identity = 101/244 (41.39%), Postives = 130/244 (53.28%), Query Frame = 1 Query: 28 AEAVHGANPNVLVILSGLNFDTDLSF----------NGKLVFEEHWYSFGDTQSWTLGNPNQVCEQVTRNFM---------------------------NQNKFLNCFMAVAAELDLDWASWTLFGGFYIREGVVAADQSFGILNWNWS--KEQAYHK-----------------LNHLVIFHPLSGFCILRKLLVDPLKLGPCFR---WLEYTAQKKLLVKGT--------EGKEAKLGTTCS 558 AEAVH ANP+VLVILSGLNFD DLSF +GKLVFE H YSF D +SW GNPNQVC QV + M N N++ NCF+ +AAELD DWA WTL G +Y+REGVV ++ +G+++WNW + ++ K +H +IFHP++G C+ R PL+LGPC W +YT K L + GT G+ AKLG C+ Sbjct: 228 AEAVHAANPDVLVILSGLNFDKDLSFLRQRPINLTFSGKLVFEIHRYSFTDGKSWETGNPNQVCGQVVNDIMSRGGFLLDQGYPLFVSEFGADQRGTNVNDNRYFNCFLGLAAELDFDWALWTLVGSYYLREGVVGLNEVYGVMDWNWCDIRNSSFLKRISTVQSPFQGPGYNESRSHKLIFHPMTGLCVRRISFFQPLELGPCSESDAW-DYTPTKTLTLTGTYFCLQADKSGQPAKLGIMCT 470
BLAST of Ca_12737 vs. TrEMBL
Match: M1AKP1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009602 PE=4 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 6.682e-42 Identity = 101/244 (41.39%), Postives = 130/244 (53.28%), Query Frame = 1 Query: 28 AEAVHGANPNVLVILSGLNFDTDLSF----------NGKLVFEEHWYSFGDTQSWTLGNPNQVCEQVTRNFM---------------------------NQNKFLNCFMAVAAELDLDWASWTLFGGFYIREGVVAADQSFGILNWNWS--KEQAYHK-----------------LNHLVIFHPLSGFCILRKLLVDPLKLGPCFR---WLEYTAQKKLLVKGT--------EGKEAKLGTTCS 558 AEAVH ANP+VLVILSGLNFD DLSF +GKLVFE H YSF D +SW GNPNQVC QV + M N N++ NCF+ +AAELD DWA WTL G +Y+REGVV ++ +G+++WNW + ++ K +H +IFHP++G C+ R PL+LGPC W +YT K L + GT G+ AKLG C+ Sbjct: 5 AEAVHAANPDVLVILSGLNFDKDLSFLRQRPINLTFSGKLVFEIHRYSFTDGKSWETGNPNQVCGQVVNDIMSRGGFLLDQGYPLFVSEFGADQRGTNVNDNRYFNCFLGLAAELDFDWALWTLVGSYYLREGVVGLNEVYGVMDWNWCDIRNSSFLKRISTVQSPFQGPGYNESRSHKLIFHPMTGLCVRRISFFQPLELGPCSESDAW-DYTPTKTLTLTGTYFCLQADKSGQPAKLGIMCT 247
BLAST of Ca_12737 vs. TrEMBL
Match: I1MYM2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 8.727e-42 Identity = 110/245 (44.90%), Postives = 126/245 (51.43%), Query Frame = 1 Query: 28 AEAVHGANPNVLVILSGLNFDTDLSF----------NGKLVFEEHWYSFGDTQSWTLGNPNQVCEQVTRNFM---------------------------NQNKFLNCFMAVAAELDLDWASWTLFGGFYIREGVVAADQSFGILNWNWSKEQAYHKLN-------------------HLVIFHPLSGFCILRKLLVDPLKLGPCFR---WLEYTAQKKLLVKGT---------EGKEAKLGTTCS 558 AEAVHGANP+VLVI+SGLN+D DLSF + KLVFE HWYSF D SWT NPNQVC +VT M N N + NC + +AA+LD DWA WTL G +Y+REG V + +GIL N + L H VIFHPL+G CI KL +PLKLGPC W EYTAQK L VKG EGKEAKLG CS Sbjct: 229 AEAVHGANPDVLVIMSGLNYDLDLSFLRKQQVKLSFSRKLVFELHWYSFSDGDSWTTENPNQVCGKVTGRVMRSAGYLLEQGYPLVLSEFGWDLRGTNQNDNSYFNCLLPLAAQLDFDWAYWTLAGSYYLREGTVGLIEVYGILTQNTTLPTTTFLLQRISAIQLPYRGPGLSEVEAHKVIFHPLTGLCISGKL--EPLKLGPCSNSEGW-EYTAQKVLSVKGRNSTCLQAEGEGKEAKLGNECS 470
BLAST of Ca_12737 vs. TrEMBL
Match: K4CLQ7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc08g066810.2 PE=4 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.140e-41 Identity = 101/244 (41.39%), Postives = 128/244 (52.46%), Query Frame = 1 Query: 28 AEAVHGANPNVLVILSGLNFDTDLSF----------NGKLVFEEHWYSFGDTQSWTLGNPNQVCEQVTRNFM---------------------------NQNKFLNCFMAVAAELDLDWASWTLFGGFYIREGVVAADQSFGILNWNWSKEQAYHKLN-------------------HLVIFHPLSGFCILRKLLVDPLKLGPCFR---WLEYTAQKKLLVKGT--------EGKEAKLGTTCS 558 AEAVH ANP+VLVILSGLNFD DLSF +GKLVFE H YSF D +SW GN NQVC QV + M N N++ NCF+ +AAELD DWA WTL G +Y+REGVV ++ +G+++WNW + LN H +IFHP++G C+ R + PL+LGPC W +YT K L + GT G+ AKLG C+ Sbjct: 229 AEAVHAANPDVLVILSGLNFDKDLSFLRQRPINLTFSGKLVFEIHRYSFTDGKSWETGNANQVCGQVLNDMMSRGGFLLDQGYPLFVSEFGADQRGTNVNDNRYFNCFLGLAAELDFDWALWTLVGSYYLREGVVGLNEVYGVMDWNWCDIRNSSFLNRISAVQSPFQGPGYNESRSHKLIFHPMTGLCVRRISFLQPLELGPCSESDAW-DYTTTKSLTLTGTYFCLQADKSGQPAKLGIMCT 471
BLAST of Ca_12737 vs. DB:Swiss
Match: GH5FP_CHAOB (Glycosyl hydrolase 5 family protein OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.472e-25 Identity = 80/250 (32.00%), Postives = 110/250 (44.00%), Query Frame = 1 Query: 16 FDYAAEAVHGANPNVLVILSGLNFDTDLS----------FNGKLVFEEHWYSFGDTQSWTLGNPNQVCEQVTRNFM-------------------------------NQNKFLNCFMAVAAELDLDWASWTLFGGFYIR---EGVVAADQSFGILNWNWSKEQAYHKLNHL-------------------VIFHPLSGFCILRKLLVDPLKLGPC----FRWLEYTAQKKLLVKGTEGKEAKLGTTCSGV 564 + A VH ANP VLVILSGL FDTDLS F K+V+E HWYSFG W G PN VC+ T F N N++LNC +A AE DLDWA WT+ G +Y R + V ++++G N +WS+ + ++ L +I+HP SG C+ + + + LG C RW Y A K + G G + + T +G+ Sbjct: 223 MQWGAATVHKANPKVLVILSGLQFDTDLSFLPVLPVTLPFKEKIVYEGHWYSFG--VPWRTGLPNDVCKNETGRFKSNVGFVTSSANATAAPLFMSEFGIDQRYVNDNDNRYLNCILAYLAEEDLDWALWTMGGSYYYRSDKQPVKDFEETYGFFNHDWSRIRNPDFISRLKEIQQPIQDPYLAPGPYYQIIYHPASGLCV-ESGIGNTVHLGSCQSVRSRW-NYDASVKGPI-GLMGSSSCISTQGNGL 467 The following BLAST results are available for this feature:
BLAST of Ca_12737 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_12737 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_12737_v1.0_kabuli ID=Ca_12737_v1.0_kabuli; Name=Ca_12737; organism=Cicer arietinum; type=mRNA; length=588bpback to top protein sequence of Ca_12737_v1.0_kabuli >Ca_12737_v1.0_kabuli ID=Ca_12737_v1.0_kabuli; Name=Ca_12737_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=195bpback to top mRNA from alignment at Ca5:43211171..43212360- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_12737_v1.0_kabuli ID=Ca_12737_v1.0_kabuli; Name=Ca_12737; organism=Cicer arietinum; type=mRNA; length=1190bp; location=Sequence derived from: Ca5:43211171..43212360- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca5:43211171..43212360- >Ca_12737_v1.0_kabuli ID=Ca_12737_v1.0_kabuli; Name=Ca_12737; organism=Cicer arietinum; type=CDS; length=588bp; location=Sequence derived from: Ca5:43211171..43212360- (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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