Ca_06426, Ca_06426_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_06426 vs. TrEMBL
Match: G7JMH4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g086740 PE=4 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 3.870e-90 Identity = 149/176 (84.66%), Postives = 158/176 (89.77%), Query Frame = 1 Query: 10 TNFVHVLTLLVITASMFAVTMANKDWPSFG-FNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSS 534 TNFVHV T LVIT SMF VTMANKDWPSFG FN+TDW SRFGNHHH INKTEQQPK IIVGGS+NWHFGYNYSDWA+K+GPFYLNDTLVFKYDAPNATSFPHSVYMF W SFM CDVK AKM+ANHTQG GEGF+ VLNKWKPYYF+CGEKNGLHCN+GQMKF + PMLRPFW S Sbjct: 5 TNFVHVFTFLVITTSMFTVTMANKDWPSFGNFNYTDWWSRFGNHHHQINKTEQQPKNIIVGGSQNWHFGYNYSDWAIKNGPFYLNDTLVFKYDAPNATSFPHSVYMFPTWQSFMKCDVKKAKMVANHTQGVGEGFKFVLNKWKPYYFSCGEKNGLHCNVGQMKFTVMPMLRPFWQS 180
BLAST of Ca_06426 vs. TrEMBL
Match: G7JMH5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g086750 PE=4 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 1.126e-89 Identity = 151/178 (84.83%), Postives = 161/178 (90.45%), Query Frame = 1 Query: 10 TNFVHVLTLL--VITASMFAVTMANKDWPSFG-FNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSS 534 TN VHVLTLL +IT SMF VTMANKDWPSFG FN+TDW SRFGNHHH INKTEQQPK IIVGGS+NWHFGYNYSDWA+K+GPFYLNDTLVFKYDAPNATSFPHSVYMF W SFM CDVK AKM+ANHTQG GEGF+ VLNKWKPYYF+CGEKNGLHCN+GQMKFA+ PMLRPFWSS Sbjct: 5 TNIVHVLTLLLVIITTSMFTVTMANKDWPSFGNFNYTDWWSRFGNHHHQINKTEQQPKNIIVGGSQNWHFGYNYSDWAIKNGPFYLNDTLVFKYDAPNATSFPHSVYMFPTWQSFMKCDVKKAKMVANHTQGVGEGFKFVLNKWKPYYFSCGEKNGLHCNVGQMKFAVMPMLRPFWSS 182
BLAST of Ca_06426 vs. TrEMBL
Match: G7JMH1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g086710 PE=4 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 3.276e-89 Identity = 149/179 (83.24%), Postives = 163/179 (91.06%), Query Frame = 1 Query: 10 TNFVHVLTLL--VITASMFAVTMANKDWPSFG-FNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537 TN VHVLTLL +I+ASMF VT+ANKDWPSFG FN+TDW SRFGNHHH INKTEQQPKKIIVGGS+NWHFGYNYSDWA+K+GPFY+NDTL+FKYDAPNATSFPHSVYMF W SFM CDVK AKM+ANHTQG GEGF+ VLNKWKPYYF+CGEKNGLHCN+GQMKFAI PM+RPFWS P Sbjct: 5 TNIVHVLTLLLVIISASMFTVTVANKDWPSFGNFNYTDWWSRFGNHHHQINKTEQQPKKIIVGGSQNWHFGYNYSDWAIKNGPFYVNDTLIFKYDAPNATSFPHSVYMFPTWQSFMKCDVKKAKMVANHTQGVGEGFKFVLNKWKPYYFSCGEKNGLHCNVGQMKFAIMPMIRPFWSWP 183
BLAST of Ca_06426 vs. TrEMBL
Match: G7JMH3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g086730 PE=4 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 5.231e-87 Identity = 149/177 (84.18%), Postives = 159/177 (89.83%), Query Frame = 1 Query: 10 TNFVHVLTLLVI-TASMFAVTMANKDWPSFG-FNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSS 534 TN VHVLTLLVI TASMF VT+ANKDWPSFG FN+TDW SRFGNHH INKTEQQPKKIIVGGS+NWHFGYNYSDWA+K+GPFYLNDTLVFKYDAPNATSFPHSVYMF W SFM CDVK AKM+ANHTQG GEGF+ VLNKWKPYYF+CGEKNGLHCN+GQMKF + PMLRPF S Sbjct: 5 TNIVHVLTLLVIITASMFTVTVANKDWPSFGNFNYTDWWSRFGNHHRQINKTEQQPKKIIVGGSQNWHFGYNYSDWAIKNGPFYLNDTLVFKYDAPNATSFPHSVYMFPTWQSFMKCDVKKAKMVANHTQGVGEGFKFVLNKWKPYYFSCGEKNGLHCNVGQMKFTVMPMLRPFLPS 181
BLAST of Ca_06426 vs. TrEMBL
Match: I3STL3_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 2.062e-75 Identity = 126/174 (72.41%), Postives = 148/174 (85.06%), Query Frame = 1 Query: 16 FVHVLTLLVITASMFAVTMANKDWPSFGFNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537 F L +LVIT SMFAV+MANKDW S GFN+TDW SRFGNHHH+ + +QQPK+I+VGGSE+WHFGYNYSDWA+KS PFYLNDTLVFK+DAPN ++FPHSVYMF++ +SFMNCD+K AKMLAN TQG+GEGF V KW+PY+F CGE+NG HCN G MKFA+ PMLRPFWS P Sbjct: 5 FTQALIMLVITVSMFAVSMANKDWSS-GFNYTDWWSRFGNHHHNKTQQQQQPKQILVGGSEHWHFGYNYSDWAIKSAPFYLNDTLVFKFDAPNTSTFPHSVYMFKDIYSFMNCDIKRAKMLANPTQGAGEGFMFVSKKWQPYFFGCGERNGFHCNNGTMKFAVMPMLRPFWSWP 177
BLAST of Ca_06426 vs. TrEMBL
Match: K7K845_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 4.593e-75 Identity = 129/178 (72.47%), Postives = 149/178 (83.71%), Query Frame = 1 Query: 10 TNFVHVLTLLVITASMFAVTMANKDWPSFGFN--HTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537 T F H LTL V+ ASM +++MANKDW SFG N ++DW SRF N H NKTEQ+P+KIIVGGSE WHFG+NY+DWA K+GPFYLNDTLVFKYDAPNATSFPHSVY+F N WSF+NCDVKSAKMLAN TQG GEGF VLN+W+PY+FACGE+NG HCN GQMKFA+ P++RPFW P Sbjct: 3 TKFAHALTLFVLVASMLSMSMANKDW-SFGSNSNYSDWWSRFRNRHQ--NKTEQEPRKIIVGGSEGWHFGFNYTDWAFKNGPFYLNDTLVFKYDAPNATSFPHSVYIFPNLWSFLNCDVKSAKMLANPTQGGGEGFHFVLNRWQPYFFACGERNGFHCNSGQMKFAVMPIIRPFWPWP 177
BLAST of Ca_06426 vs. TrEMBL
Match: K7N0N8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 1.131e-73 Identity = 126/175 (72.00%), Postives = 151/175 (86.29%), Query Frame = 1 Query: 16 FVH-VLTLLVITASMFAVTMANKDWPSFGFNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537 F H V+ L+VI+ASMF+V+MANKDW SFGFN+TDW SRFGNH NKT+QQP++I+VGGSE+WH+G+NY+DWA K+ PFYLNDTLVFKYDAPNATSFPHSVYMF+++ SF+ CD+K AKMLAN TQGSGEGF+ VL KW+P+YFACGE+NG HCN G MKFA+ PM RPFW P Sbjct: 41 FTHGVVILIVISASMFSVSMANKDW-SFGFNYTDWWSRFGNHPQ--NKTQQQPRQILVGGSEHWHYGFNYTDWAFKTAPFYLNDTLVFKYDAPNATSFPHSVYMFKSFGSFLKCDIKKAKMLANPTQGSGEGFKFVLKKWQPHYFACGERNGFHCNNGTMKFAVMPMFRPFWKWP 212
BLAST of Ca_06426 vs. TrEMBL
Match: I1KL20_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 5.615e-73 Identity = 122/171 (71.35%), Postives = 149/171 (87.13%), Query Frame = 1 Query: 25 VLTLLVITASMFAVTMANKDWPSFGFNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537 V+ L++I+ASMF+V+MANKDW SFGFN+TDW SRFGNH NKT+QQPK+I+VGGSE+WH+G+NY+DWA KS PFYLNDTLVFKYDAPNATSFPHSVYMF+++ SF+ CD++ AKMLAN QG+GEGF+ VL +WKP+YFACGE+NG HCN G MKFA+ PM+RPFW P Sbjct: 9 VMILVIISASMFSVSMANKDW-SFGFNYTDWWSRFGNHPQ--NKTQQQPKQIVVGGSEHWHYGFNYTDWAFKSAPFYLNDTLVFKYDAPNATSFPHSVYMFKSFGSFLKCDIEKAKMLANPMQGTGEGFKFVLKRWKPHYFACGERNGFHCNNGTMKFAVMPMIRPFWQWP 176
BLAST of Ca_06426 vs. TrEMBL
Match: C6T4R3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 4.753e-72 Identity = 121/171 (70.76%), Postives = 148/171 (86.55%), Query Frame = 1 Query: 25 VLTLLVITASMFAVTMANKDWPSFGFNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537 V+ L++I+ASMF+V+MANKDW SFGFN+TDW SRFGNH NKT+QQPK+I+VGGSE+WH+ +NY+DWA KS PFYLNDTLVFKYDAPNATSFPHSVYMF+++ SF+ CD++ AKMLAN QG+GEGF+ VL +WKP+YFACGE+NG HCN G MKFA+ PM+RPFW P Sbjct: 9 VMILVIISASMFSVSMANKDW-SFGFNYTDWWSRFGNHPQ--NKTQQQPKQIVVGGSEHWHYRFNYTDWAFKSAPFYLNDTLVFKYDAPNATSFPHSVYMFKSFGSFLKCDIEKAKMLANPMQGTGEGFKFVLKRWKPHYFACGERNGFHCNNGTMKFAVMPMIRPFWQWP 176
BLAST of Ca_06426 vs. TrEMBL
Match: I1KL21_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 1.997e-70 Identity = 119/171 (69.59%), Postives = 146/171 (85.38%), Query Frame = 1 Query: 25 VLTLLVITASMFAVTMANKDWPSFGFNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537 V+ L VI+ASMF+++MANKDW SFGFN+TDW SRFGNH NKT+Q P++I+VGGSE+WH+G+NY+DWA K+ PFYLNDTLVFKYDAPNATSFPHSVYM +++ SFM CD++ AKMLAN TQG+GE F+ VL +W+P+YFACGE+NG HCN G MKFA+ PMLRPFW P Sbjct: 9 VMILFVISASMFSMSMANKDW-SFGFNYTDWWSRFGNHAQ--NKTQQPPRQILVGGSEHWHYGFNYTDWAFKNAPFYLNDTLVFKYDAPNATSFPHSVYMIKSFGSFMKCDIEKAKMLANPTQGTGESFKFVLKRWQPHYFACGERNGFHCNNGTMKFAVMPMLRPFWRWP 176 The following BLAST results are available for this feature:
BLAST of Ca_06426 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_06426 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_06426_v1.0_kabuli ID=Ca_06426_v1.0_kabuli; Name=Ca_06426; organism=Cicer arietinum; type=mRNA; length=540bpback to top protein sequence of Ca_06426_v1.0_kabuli >Ca_06426_v1.0_kabuli ID=Ca_06426_v1.0_kabuli; Name=Ca_06426_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=179bpback to top mRNA from alignment at Ca6:18072671..18073527+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_06426_v1.0_kabuli ID=Ca_06426_v1.0_kabuli; Name=Ca_06426; organism=Cicer arietinum; type=mRNA; length=857bp; location=Sequence derived from: Ca6:18072671..18073527+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca6:18072671..18073527+ >Ca_06426_v1.0_kabuli ID=Ca_06426_v1.0_kabuli; Name=Ca_06426; organism=Cicer arietinum; type=CDS; length=540bp; location=Sequence derived from: Ca6:18072671..18073527+ (Cicer arietinumback to top |