Ca_06426, Ca_06426_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_06426
Unique NameCa_06426_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length540
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca6chromosomeCa6:18072671..18073527 +Cicer arietinum CDC Frontier genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum CDC Frontier genome v1.02013-01-01
InterProScan analysis for kabuli C. arietinum unigenes2013-10-24
Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL2013-10-24
BLAST: C. arietinum CDC Frontier (kabuli), Swissprot2019-05-21
Expression: Chickpea drought stress response 2023-09-13
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR495Pisum sativum Cameor genome v1aPisum sativum
capsR501Pisum sativum Cameor genome v1aPisum sativum
capsR504Pisum sativum Cameor genome v1aPisum sativum
capsR510Pisum sativum Cameor genome v1aPisum sativum
cavuR491Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR494Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR500Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR504Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR562Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR590Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR595Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR600Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR605Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR653Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0720Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0905Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0488Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0536Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0966Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL217Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL219Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL691Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL692Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR417Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR455Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR465Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cavrvR500Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR501Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR544Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR551Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR559Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR563Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR567Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR592Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR619Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR625Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR466Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR479Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR483Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR529Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR250Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR252Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR258Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR264Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL282Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL285Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL289Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL581Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL696Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR481Cicer arietinum
cacarR487Cicer arietinum
cacarR515Cicer arietinum
cacarR523Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_27922Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_019146Cajanus cajan Asha genome v1.0Cajanus cajan
Phvul.009G062600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat7g122840.1Pisum sativum Cameor genome v1aPisum sativum
Psat05G0152500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Va04G068450.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan06g152700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014665027.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun02g013000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg54884.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun09g240800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat7g121720.1Pisum sativum Cameor genome v1aPisum sativum
evm.model.Chr02.161Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat5g044760.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.003G012600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
LR48_mrnaVigan09g019200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014643896.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg29281.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr09.1351Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat07G0315700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-KK1_020562Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004501539.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004505132.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_06426-CDS1Ca_06426-CDS1Cicer arietinumCDS
Ca_06426-CDS2Ca_06426-CDS2Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_06426_v1.0_kabuliCa_06426_v1.0_kabuliCicer arietinumpolypeptide


Homology
BLAST of Ca_06426 vs. TrEMBL
Match: G7JMH4_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g086740 PE=4 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 3.870e-90
Identity = 149/176 (84.66%), Postives = 158/176 (89.77%), Query Frame = 1
Query:   10 TNFVHVLTLLVITASMFAVTMANKDWPSFG-FNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSS 534
            TNFVHV T LVIT SMF VTMANKDWPSFG FN+TDW SRFGNHHH INKTEQQPK IIVGGS+NWHFGYNYSDWA+K+GPFYLNDTLVFKYDAPNATSFPHSVYMF  W SFM CDVK AKM+ANHTQG GEGF+ VLNKWKPYYF+CGEKNGLHCN+GQMKF + PMLRPFW S
Sbjct:    5 TNFVHVFTFLVITTSMFTVTMANKDWPSFGNFNYTDWWSRFGNHHHQINKTEQQPKNIIVGGSQNWHFGYNYSDWAIKNGPFYLNDTLVFKYDAPNATSFPHSVYMFPTWQSFMKCDVKKAKMVANHTQGVGEGFKFVLNKWKPYYFSCGEKNGLHCNVGQMKFTVMPMLRPFWQS 180          
BLAST of Ca_06426 vs. TrEMBL
Match: G7JMH5_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g086750 PE=4 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 1.126e-89
Identity = 151/178 (84.83%), Postives = 161/178 (90.45%), Query Frame = 1
Query:   10 TNFVHVLTLL--VITASMFAVTMANKDWPSFG-FNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSS 534
            TN VHVLTLL  +IT SMF VTMANKDWPSFG FN+TDW SRFGNHHH INKTEQQPK IIVGGS+NWHFGYNYSDWA+K+GPFYLNDTLVFKYDAPNATSFPHSVYMF  W SFM CDVK AKM+ANHTQG GEGF+ VLNKWKPYYF+CGEKNGLHCN+GQMKFA+ PMLRPFWSS
Sbjct:    5 TNIVHVLTLLLVIITTSMFTVTMANKDWPSFGNFNYTDWWSRFGNHHHQINKTEQQPKNIIVGGSQNWHFGYNYSDWAIKNGPFYLNDTLVFKYDAPNATSFPHSVYMFPTWQSFMKCDVKKAKMVANHTQGVGEGFKFVLNKWKPYYFSCGEKNGLHCNVGQMKFAVMPMLRPFWSS 182          
BLAST of Ca_06426 vs. TrEMBL
Match: G7JMH1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g086710 PE=4 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 3.276e-89
Identity = 149/179 (83.24%), Postives = 163/179 (91.06%), Query Frame = 1
Query:   10 TNFVHVLTLL--VITASMFAVTMANKDWPSFG-FNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537
            TN VHVLTLL  +I+ASMF VT+ANKDWPSFG FN+TDW SRFGNHHH INKTEQQPKKIIVGGS+NWHFGYNYSDWA+K+GPFY+NDTL+FKYDAPNATSFPHSVYMF  W SFM CDVK AKM+ANHTQG GEGF+ VLNKWKPYYF+CGEKNGLHCN+GQMKFAI PM+RPFWS P
Sbjct:    5 TNIVHVLTLLLVIISASMFTVTVANKDWPSFGNFNYTDWWSRFGNHHHQINKTEQQPKKIIVGGSQNWHFGYNYSDWAIKNGPFYVNDTLIFKYDAPNATSFPHSVYMFPTWQSFMKCDVKKAKMVANHTQGVGEGFKFVLNKWKPYYFSCGEKNGLHCNVGQMKFAIMPMIRPFWSWP 183          
BLAST of Ca_06426 vs. TrEMBL
Match: G7JMH3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g086730 PE=4 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 5.231e-87
Identity = 149/177 (84.18%), Postives = 159/177 (89.83%), Query Frame = 1
Query:   10 TNFVHVLTLLVI-TASMFAVTMANKDWPSFG-FNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSS 534
            TN VHVLTLLVI TASMF VT+ANKDWPSFG FN+TDW SRFGNHH  INKTEQQPKKIIVGGS+NWHFGYNYSDWA+K+GPFYLNDTLVFKYDAPNATSFPHSVYMF  W SFM CDVK AKM+ANHTQG GEGF+ VLNKWKPYYF+CGEKNGLHCN+GQMKF + PMLRPF  S
Sbjct:    5 TNIVHVLTLLVIITASMFTVTVANKDWPSFGNFNYTDWWSRFGNHHRQINKTEQQPKKIIVGGSQNWHFGYNYSDWAIKNGPFYLNDTLVFKYDAPNATSFPHSVYMFPTWQSFMKCDVKKAKMVANHTQGVGEGFKFVLNKWKPYYFSCGEKNGLHCNVGQMKFTVMPMLRPFLPS 181          
BLAST of Ca_06426 vs. TrEMBL
Match: I3STL3_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 2.062e-75
Identity = 126/174 (72.41%), Postives = 148/174 (85.06%), Query Frame = 1
Query:   16 FVHVLTLLVITASMFAVTMANKDWPSFGFNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537
            F   L +LVIT SMFAV+MANKDW S GFN+TDW SRFGNHHH+  + +QQPK+I+VGGSE+WHFGYNYSDWA+KS PFYLNDTLVFK+DAPN ++FPHSVYMF++ +SFMNCD+K AKMLAN TQG+GEGF  V  KW+PY+F CGE+NG HCN G MKFA+ PMLRPFWS P
Sbjct:    5 FTQALIMLVITVSMFAVSMANKDWSS-GFNYTDWWSRFGNHHHNKTQQQQQPKQILVGGSEHWHFGYNYSDWAIKSAPFYLNDTLVFKFDAPNTSTFPHSVYMFKDIYSFMNCDIKRAKMLANPTQGAGEGFMFVSKKWQPYFFGCGERNGFHCNNGTMKFAVMPMLRPFWSWP 177          
BLAST of Ca_06426 vs. TrEMBL
Match: K7K845_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 4.593e-75
Identity = 129/178 (72.47%), Postives = 149/178 (83.71%), Query Frame = 1
Query:   10 TNFVHVLTLLVITASMFAVTMANKDWPSFGFN--HTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537
            T F H LTL V+ ASM +++MANKDW SFG N  ++DW SRF N H   NKTEQ+P+KIIVGGSE WHFG+NY+DWA K+GPFYLNDTLVFKYDAPNATSFPHSVY+F N WSF+NCDVKSAKMLAN TQG GEGF  VLN+W+PY+FACGE+NG HCN GQMKFA+ P++RPFW  P
Sbjct:    3 TKFAHALTLFVLVASMLSMSMANKDW-SFGSNSNYSDWWSRFRNRHQ--NKTEQEPRKIIVGGSEGWHFGFNYTDWAFKNGPFYLNDTLVFKYDAPNATSFPHSVYIFPNLWSFLNCDVKSAKMLANPTQGGGEGFHFVLNRWQPYFFACGERNGFHCNSGQMKFAVMPIIRPFWPWP 177          
BLAST of Ca_06426 vs. TrEMBL
Match: K7N0N8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 1.131e-73
Identity = 126/175 (72.00%), Postives = 151/175 (86.29%), Query Frame = 1
Query:   16 FVH-VLTLLVITASMFAVTMANKDWPSFGFNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537
            F H V+ L+VI+ASMF+V+MANKDW SFGFN+TDW SRFGNH    NKT+QQP++I+VGGSE+WH+G+NY+DWA K+ PFYLNDTLVFKYDAPNATSFPHSVYMF+++ SF+ CD+K AKMLAN TQGSGEGF+ VL KW+P+YFACGE+NG HCN G MKFA+ PM RPFW  P
Sbjct:   41 FTHGVVILIVISASMFSVSMANKDW-SFGFNYTDWWSRFGNHPQ--NKTQQQPRQILVGGSEHWHYGFNYTDWAFKTAPFYLNDTLVFKYDAPNATSFPHSVYMFKSFGSFLKCDIKKAKMLANPTQGSGEGFKFVLKKWQPHYFACGERNGFHCNNGTMKFAVMPMFRPFWKWP 212          
BLAST of Ca_06426 vs. TrEMBL
Match: I1KL20_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 5.615e-73
Identity = 122/171 (71.35%), Postives = 149/171 (87.13%), Query Frame = 1
Query:   25 VLTLLVITASMFAVTMANKDWPSFGFNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537
            V+ L++I+ASMF+V+MANKDW SFGFN+TDW SRFGNH    NKT+QQPK+I+VGGSE+WH+G+NY+DWA KS PFYLNDTLVFKYDAPNATSFPHSVYMF+++ SF+ CD++ AKMLAN  QG+GEGF+ VL +WKP+YFACGE+NG HCN G MKFA+ PM+RPFW  P
Sbjct:    9 VMILVIISASMFSVSMANKDW-SFGFNYTDWWSRFGNHPQ--NKTQQQPKQIVVGGSEHWHYGFNYTDWAFKSAPFYLNDTLVFKYDAPNATSFPHSVYMFKSFGSFLKCDIEKAKMLANPMQGTGEGFKFVLKRWKPHYFACGERNGFHCNNGTMKFAVMPMIRPFWQWP 176          
BLAST of Ca_06426 vs. TrEMBL
Match: C6T4R3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 4.753e-72
Identity = 121/171 (70.76%), Postives = 148/171 (86.55%), Query Frame = 1
Query:   25 VLTLLVITASMFAVTMANKDWPSFGFNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537
            V+ L++I+ASMF+V+MANKDW SFGFN+TDW SRFGNH    NKT+QQPK+I+VGGSE+WH+ +NY+DWA KS PFYLNDTLVFKYDAPNATSFPHSVYMF+++ SF+ CD++ AKMLAN  QG+GEGF+ VL +WKP+YFACGE+NG HCN G MKFA+ PM+RPFW  P
Sbjct:    9 VMILVIISASMFSVSMANKDW-SFGFNYTDWWSRFGNHPQ--NKTQQQPKQIVVGGSEHWHYRFNYTDWAFKSAPFYLNDTLVFKYDAPNATSFPHSVYMFKSFGSFLKCDIEKAKMLANPMQGTGEGFKFVLKRWKPHYFACGERNGFHCNNGTMKFAVMPMIRPFWQWP 176          
BLAST of Ca_06426 vs. TrEMBL
Match: I1KL21_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 1.997e-70
Identity = 119/171 (69.59%), Postives = 146/171 (85.38%), Query Frame = 1
Query:   25 VLTLLVITASMFAVTMANKDWPSFGFNHTDWRSRFGNHHHHINKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNATSFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFACGEKNGLHCNIGQMKFAIFPMLRPFWSSP 537
            V+ L VI+ASMF+++MANKDW SFGFN+TDW SRFGNH    NKT+Q P++I+VGGSE+WH+G+NY+DWA K+ PFYLNDTLVFKYDAPNATSFPHSVYM +++ SFM CD++ AKMLAN TQG+GE F+ VL +W+P+YFACGE+NG HCN G MKFA+ PMLRPFW  P
Sbjct:    9 VMILFVISASMFSMSMANKDW-SFGFNYTDWWSRFGNHAQ--NKTQQPPRQILVGGSEHWHYGFNYTDWAFKNAPFYLNDTLVFKYDAPNATSFPHSVYMIKSFGSFMKCDIEKAKMLANPTQGTGESFKFVLKRWQPHYFACGERNGFHCNNGTMKFAVMPMLRPFWRWP 176          
The following BLAST results are available for this feature:
BLAST of Ca_06426 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7JMH4_MEDTR3.870e-9084.66Putative uncharacterized protein OS=Medicago trunc... [more]
G7JMH5_MEDTR1.126e-8984.83Putative uncharacterized protein OS=Medicago trunc... [more]
G7JMH1_MEDTR3.276e-8983.24Putative uncharacterized protein OS=Medicago trunc... [more]
G7JMH3_MEDTR5.231e-8784.18Putative uncharacterized protein OS=Medicago trunc... [more]
I3STL3_LOTJA2.062e-7572.41Uncharacterized protein OS=Lotus japonicus PE=2 SV... [more]
K7K845_SOYBN4.593e-7572.47Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
K7N0N8_SOYBN1.131e-7372.00Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1KL20_SOYBN5.615e-7371.35Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C6T4R3_SOYBN4.753e-7270.76Putative uncharacterized protein OS=Glycine max PE... [more]
I1KL21_SOYBN1.997e-7069.59Uncharacterized protein OS=Glycine max PE=4 SV=1[more]

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BLAST of Ca_06426 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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Expression

Available Analyses

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Download expression dataset for this feature
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003245Plastocyanin-likePFAMPF02298Cu_bind_likecoord: 69..163
score: 1.5
IPR003245Plastocyanin-likePROFILEPS51485PHYTOCYANINcoord: 58..172
score: 24
IPR008972CupredoxinGENE3D2.60.40.420no descriptioncoord: 58..168
score: 2.6
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 56..172
score: 4.1

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_06426_v1.0_kabuli ID=Ca_06426_v1.0_kabuli; Name=Ca_06426; organism=Cicer arietinum; type=mRNA; length=540bp
ATGGCCATCACAAACTTTGTTCATGTCCTCACCTTACTGGTTATAACCGC
TTCAATGTTTGCAGTTACTATGGCAAACAAGGACTGGCCCTCCTTTGGTT
TTAACCACACTGATTGGAGGTCTAGATTTGGAAACCATCACCACCATATA
AATAAGACAGAACAACAACCCAAGAAGATTATTGTGGGTGGCTCTGAAAA
TTGGCATTTTGGCTATAACTACTCAGATTGGGCTATGAAGAGTGGCCCTT
TTTACCTCAATGATACTCTCGTTTTCAAGTATGATGCTCCAAATGCAACG
AGTTTCCCACACAGCGTGTACATGTTTCGAAATTGGTGGAGTTTCATGAA
TTGTGATGTTAAAAGTGCAAAGATGTTGGCTAATCACACACAAGGTAGTG
GGGAGGGATTTGAATTGGTGTTAAACAAGTGGAAACCTTATTACTTTGCT
TGCGGTGAGAAAAATGGATTACATTGCAACATTGGACAAATGAAATTCGC
TATTTTCCCAATGCTTCGTCCCTTCTGGTCATCGCCTTGA
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protein sequence of Ca_06426_v1.0_kabuli

>Ca_06426_v1.0_kabuli ID=Ca_06426_v1.0_kabuli; Name=Ca_06426_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=179bp
MAITNFVHVLTLLVITASMFAVTMANKDWPSFGFNHTDWRSRFGNHHHHI
NKTEQQPKKIIVGGSENWHFGYNYSDWAMKSGPFYLNDTLVFKYDAPNAT
SFPHSVYMFRNWWSFMNCDVKSAKMLANHTQGSGEGFELVLNKWKPYYFA
CGEKNGLHCNIGQMKFAIFPMLRPFWSSP
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mRNA from alignment at Ca6:18072671..18073527+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_06426_v1.0_kabuli ID=Ca_06426_v1.0_kabuli; Name=Ca_06426; organism=Cicer arietinum; type=mRNA; length=857bp; location=Sequence derived from: Ca6:18072671..18073527+ (Cicer arietinum
ATGGCCATCACAAACTTTGTTCATGTCCTCACCTTACTGGTTATAACCGC TTCAATGTTTGCAGTTACTATGGCAAACAAGGACTGGCCCTCCTTTGGTT TTAACCACACTGATTGGAGGTCTAGATTTGGAAACCATCACCACCATATA AATAAGACAGAACAACAACCCAAGAAGATTATTGTGGGTGGCTCTGAAAA TTGGCATTTTGGCTATAACTACTCAGATTGGGCTATGAAGAGTGGCCCTT TTTACCTCAATGATACTCTCGGTAAGTATATTAAATTTATTTACTTTGTA TATTAATATTACAATTTAATTAATGTTTTAGTTAAACAATAACAACAAAA TGCAATTAATTAGTTAGGAGCATTTTTTGTAAAAAAAAATATTAATGTAT CTAATAATTTCAAAAGATACTTATATTTAGGCAAAAAATAAATTTCAAAT AGAGCTCATATTTAGAGAGGGGTATAGTATAAGTTATAAACTCCATTGGT CAAGCTAATTGTTAAAGCATATATATTACTTTTAATACTTTTTTAATGAT AATTTTTAGTATTAATGTGTATATATTTATGCATGTAGTTTTCAAGTATG ATGCTCCAAATGCAACGAGTTTCCCACACAGCGTGTACATGTTTCGAAAT TGGTGGAGTTTCATGAATTGTGATGTTAAAAGTGCAAAGATGTTGGCTAA TCACACACAAGGTAGTGGGGAGGGATTTGAATTGGTGTTAAACAAGTGGA AACCTTATTACTTTGCTTGCGGTGAGAAAAATGGATTACATTGCAACATT GGACAAATGAAATTCGCTATTTTCCCAATGCTTCGTCCCTTCTGGTCATC GCCTTGA
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Coding sequence (CDS) from alignment at Ca6:18072671..18073527+

>Ca_06426_v1.0_kabuli ID=Ca_06426_v1.0_kabuli; Name=Ca_06426; organism=Cicer arietinum; type=CDS; length=540bp; location=Sequence derived from: Ca6:18072671..18073527+ (Cicer arietinum
ATGGCCATCACAAACTTTGTTCATGTCCTCACCTTACTGGTTATAACCGC
TTCAATGTTTGCAGTTACTATGGCAAACAAGGACTGGCCCTCCTTTGGTT
TTAACCACACTGATTGGAGGTCTAGATTTGGAAACCATCACCACCATATA
AATAAGACAGAACAACAACCCAAGAAGATTATTGTGGGTGGCTCTGAAAA
TTGGCATTTTGGCTATAACTACTCAGATTGGGCTATGAAGAGTGGCCCTT
TTTACCTCAATGATACTCTCGTTTTCAAGTATGATGCTCCAAATGCAACG
AGTTTCCCACACAGCGTGTACATGTTTCGAAATTGGTGGAGTTTCATGAA
TTGTGATGTTAAAAGTGCAAAGATGTTGGCTAATCACACACAAGGTAGTG
GGGAGGGATTTGAATTGGTGTTAAACAAGTGGAAACCTTATTACTTTGCT
TGCGGTGAGAAAAATGGATTACATTGCAACATTGGACAAATGAAATTCGC
TATTTTCCCAATGCTTCGTCCCTTCTGGTCATCGCCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003245Phytocyanin_dom
IPR008972Cupredoxin
Vocabulary: Molecular Function
TermDefinition
GO:0005507copper ion binding
GO:0009055electron transfer activity