Ca_03370, Ca_03370_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03370 vs. TrEMBL
Match: G7JJ63_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g132020 PE=4 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 3.406e-68 Identity = 136/186 (73.12%), Postives = 148/186 (79.57%), Query Frame = 1 Query: 1 MAKGRKFSTNRSERLLGTNYTQGSTVNHEVTDFREEDVWSMVEDRERDVNLSSGEWDSRAPSWRRNREQDHRNLGGLSLAFDNSTRIVHRASQRAEH----NMATSAPVNVPDWSKILRVDSVGSLHDLDDGFDVNDSEMVPPHEYLARGRKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGFDG 546 MAKGRKF+TNR+ERLLGTNY Q S HEVTDFREEDVWS+VEDR+ +VN + G+WDSRAPS R N GGLSL F+N V S R H N+ATSAPVNVPDWSKILRV+SV SLHD+DD N+SEMVPPHEYLARGRKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGFDG Sbjct: 1 MAKGRKFTTNRNERLLGTNYIQSSNTTHEVTDFREEDVWSIVEDRDHNVNFTPGDWDSRAPSRRFNH-------GGLSLPFENPVSNVATTSSRNVHHQYRNVATSAPVNVPDWSKILRVESVESLHDMDDD---NESEMVPPHEYLARGRKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGFDG 176
BLAST of Ca_03370 vs. TrEMBL
Match: I1MR61_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 1.586e-57 Identity = 127/199 (63.82%), Postives = 151/199 (75.88%), Query Frame = 1 Query: 1 MAKGRKF-STNRSERLLGTN-YTQGSTVNHEVTDFREEDVWSMVEDRERDVNLSSGEWDSRAPSWRRNRE--QDHRNLGGLSLAFDNS-----TRIVH---RASQRA---EHNMATSAPVNVPDWSKILRVDSVGSLHDLDDGFDVN--DSEMVPPHEYLARGRKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGFDG 546 MAKGRKF +T R++R LG Y+ ++ ++++FREEDVWS EDR+RDVN GEW++ AP RR+ Q HR++GGLSLAF++ TRIVH RA A +H MATSAPVNVPDWSKILRVDS LH++DD FD N +SEMVPPHEYLAR RKMAANSVFEGVGRTLKGRD+RRVRDAVW+QTGFDG Sbjct: 18 MAKGRKFPTTTRTDRFLGMGTYSSQASAATDLSEFREEDVWSTSEDRDRDVNAYPGEWEALAPPRRRSSRELQGHRHVGGLSLAFEDGSGGAGTRIVHHQYRAQHDAVSHQHQMATSAPVNVPDWSKILRVDS---LHEMDDVFDDNNNESEMVPPHEYLARSRKMAANSVFEGVGRTLKGRDMRRVRDAVWSQTGFDG 213
BLAST of Ca_03370 vs. TrEMBL
Match: I1KNC6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 1.753e-56 Identity = 126/202 (62.38%), Postives = 147/202 (72.77%), Query Frame = 1 Query: 1 MAKGRKF-STNRSERLLG-------TNYTQGSTVNHEVTDFREEDVWSMVEDRERDVNLSSGEWDSRAPSWRRNREQDHRNLGGLSLAFDNS----TRIVHRASQRAEHN-------MATSAPVNVPDWSKILRVDSVGSLHDLDDGFDVN-DSEMVPPHEYLARGRKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGFDG 546 MAKGRKF +T SER LG T Y+ + + ++F EEDVWS E R+ DVN GEW++ AP RRN +++ N+GGLSLAF++ TRIVH RA+H+ MATSAPVNVPDWSKILR DSV SLH +DDGFD N +SEMVPPHEYLAR RKMAANSVFEGVGRTLKGRD+RRVRDAVW+QTGFDG Sbjct: 32 MAKGRKFPTTTGSERFLGLGMGTTTTTYSSQGSAAADRSEFWEEDVWSTAEHRDGDVNACPGEWEACAPPRRRNN-RENCNVGGLSLAFEDGSGGGTRIVHH-QYRAQHDAVSRQRQMATSAPVNVPDWSKILRADSVESLHGMDDGFDENNESEMVPPHEYLARSRKMAANSVFEGVGRTLKGRDMRRVRDAVWSQTGFDG 231
BLAST of Ca_03370 vs. TrEMBL
Match: B9RXL7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0904750 PE=4 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 2.620e-52 Identity = 125/222 (56.31%), Postives = 147/222 (66.22%), Query Frame = 1 Query: 1 MAKGRKFSTNRSERLLGTNYTQGSTVNHEV-----TDFREEDVWSMVEDRERD--------VNLSSGEWDSRAP-----SWRRNREQDHRNLGGLSLAFDNST-------RIVHR-----------ASQRAEHNMATSAPVNVPDWSKILRVDSVGSLHDLDDGFDVNDSEMVPPHEYL----ARGRKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGFDG 546 MAKGR+ + +RSERLLG+ YT + H++ ++ EEDVWSMV+D + D +N S G+W RA S RR D R++GGLSLAF++S+ RIVH+ + + +MATSAPVNVPDWSKILRVDSV SLHDLDDGFD DSEMVPPHEYL AR RKM SVFEGVGRTLKGRDLRRVRDAVWNQTGFDG Sbjct: 1 MAKGRRLTASRSERLLGS-YTYSNGHGHDMLGTDSSELGEEDVWSMVDDGDDDGDRNDNQLMNNSQGDWSPRADFESMRSRRRIPRGDDRHVGGLSLAFEDSSSGKTASSRIVHQFRGHHDSVAAPPAAASPRHMATSAPVNVPDWSKILRVDSVESLHDLDDGFDEGDSEMVPPHEYLARVYARSRKMGNASVFEGVGRTLKGRDLRRVRDAVWNQTGFDG 221
BLAST of Ca_03370 vs. TrEMBL
Match: B9HZ36_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_822730 PE=4 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 3.421e-52 Identity = 119/209 (56.94%), Postives = 147/209 (70.33%), Query Frame = 1 Query: 1 MAKGRKFSTNRSERLLGTNYTQGS---TVNHEVTDFREEDVWSMVEDR----ERDVNLSSGEWDSRAPSWRRNR-EQDHRNLGGLSLAFDNST---------RIVHR------ASQRAEHNMATSAPVNVPDWSKILRVDSVGSLHDLDDGFDVNDSEMVPPHEYL----ARGRKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGFDG 546 MAKGR+ +T+RSERLLG+NY+ G+ + +EV++ EEDVWSMV+D + V+ S+G W+ RA R R +D RN+GGLSLAF++S+ RIVH+ + + +MATSAPVNVPDWSKI RV+SV SLHD DDGFD +SEMVPPHEYL AR RK SV EGVGRTLKGRD+RRVRDAVW+QTGFDG Sbjct: 1 MAKGRRLTTSRSERLLGSNYSYGNGQVPMVNEVSELGEEDVWSMVDDTADRSDSAVSNSNGAWNPRAELESRRRIPRDDRNMGGLSLAFEDSSSGGNKTASSRIVHQFRGNDLVASASPRHMATSAPVNVPDWSKIYRVNSVESLHDSDDGFDDQESEMVPPHEYLAREYARSRKTGGASVVEGVGRTLKGRDMRRVRDAVWSQTGFDG 209
BLAST of Ca_03370 vs. TrEMBL
Match: M1BD10_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400016455 PE=4 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 2.295e-48 Identity = 116/210 (55.24%), Postives = 137/210 (65.24%), Query Frame = 1 Query: 1 MAKGRKFSTNRSERLLGT--NYTQGSTVNHEVTDFREEDVWSMVEDRERDVNLSSGEWDSRAPSWRRN---------REQDH------RNLGGLSLAFDNS-----TRIVHR------ASQRAEHNMATSAPVNVPDWSKILRVDSVGSLHDLDDGFDVNDSEMVPPHEYLARGRKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGFDG 546 MAKGRK +T+RSE LLG +Y G+ + ++ E+D+WS V+D D + S GEW RA N ++ DH R +GGLSLAFD+S RI+H+ S R H MATSAPVNVPDWSKI RV+SV SLHD DDG D +DSEMVPPHEY+AR R A SVFEGVGRTLKGRDL RVRDAVW+QTGFDG Sbjct: 1 MAKGRKLATSRSEMLLGNYPSYRNGTATLNGSSELGEDDIWSTVDDM--DDHDSRGEWSPRAADESNNGYVNRKLPVQQSDHHHSRRGRQVGGLSLAFDDSGKTASPRILHQFRGQDAPSTRVAH-MATSAPVNVPDWSKIYRVNSVESLHDSDDGVDDHDSEMVPPHEYIARSRNSNARSVFEGVGRTLKGRDLSRVRDAVWSQTGFDG 207
BLAST of Ca_03370 vs. TrEMBL
Match: K4B9S2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc02g080510.1 PE=4 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 2.295e-48 Identity = 116/209 (55.50%), Postives = 139/209 (66.51%), Query Frame = 1 Query: 1 MAKGRKFSTNRSERLLGT--NYTQGSTVNHEVTDFREEDVWSMVEDRERDVNLSSGEWDSRAPSWRRN-------REQDH-------RNLGGLSLAFDNS-----TRIVHR------ASQRAEHNMATSAPVNVPDWSKILRVDSVGSLHDLDDGFDVNDSEMVPPHEYLARGRKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGFDG 546 MAKGRK +T+RSE LLG +Y G+ + ++ E+DVW+ V+D D + S GEW RA + N ++ DH R +GGLSLAFD+S RI+H+ S R H MATSAPVNVPDWSKI RV+SV SLHD DDG D +DSEMVPPHEY+AR R A+SVFEGVGRTLKGRDL RVRDAVW+QTGFDG Sbjct: 1 MAKGRKLATSRSEMLLGNYPSYRNGTATVNGSSELGEDDVWATVDDM--DDHDSRGEWSPRAAAEGNNGYVNRKVQQSDHHHHSHRGRQVGGLSLAFDDSGKTASPRILHQFRGQDAPSPRVAH-MATSAPVNVPDWSKIYRVNSVESLHDSDDGVDDHDSEMVPPHEYIARSRNSNAHSVFEGVGRTLKGRDLSRVRDAVWSQTGFDG 206
BLAST of Ca_03370 vs. TrEMBL
Match: I3T7Q9_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 2.537e-47 Identity = 124/222 (55.86%), Postives = 142/222 (63.96%), Query Frame = 1 Query: 1 MAKGRKFSTNRSERLLGT---NYTQGSTVNHEVTDFREEDVWSM-VEDRERDVNLSSGEWDSR-----------APSWRRNREQ------DHRNLGGLSLAFDN--------STRIVHR----------ASQRAEHNMATSAPVNVPDWSKILRVDSVGSLHDLDDGFDVND-SEMVPPHEYLARGRKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGFDG 546 MAKGRK +T+RSER LGT ++ Q S E ++ REED+WS V E D+N S EW+S + S RNR + +HR LGGLSLAF++ + RIVH+ S R H MATS PVNVPDWSKILRVDSV SLHD D FD +D SEMVPPHEYLAR RK AA SVFEGVGRTLKGRDL RVRDAVW+QTGFDG Sbjct: 1 MAKGRKLTTSRSERFLGTYGYSHNQSSAAAAEPSELREEDIWSTDVGSGEVDLNFSD-EWESPNAETVEIIGGGSGSSYRNRHRITQNSDEHRQLGGLSLAFEDPVNSSTVATARIVHQFRAHDGVASSPSARGRH-MATSLPVNVPDWSKILRVDSVESLHD--DSFDDDDESEMVPPHEYLARSRKNAAKSVFEGVGRTLKGRDLSRVRDAVWSQTGFDG 218
BLAST of Ca_03370 vs. TrEMBL
Match: I1MFH1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.645e-46 Identity = 113/198 (57.07%), Postives = 140/198 (70.71%), Query Frame = 1 Query: 1 MAKGRKFSTNRSERLLGTN-YTQGSTVNHEVTDFREEDVWSMVEDR-ERDVNLSSGEWDSRAPSWRR--NREQDHRNLGGLSLAFD-----NSTRIVHRASQRAE-------HNMATSAPVNVPDWSKILRVDSVGSLHDLDDGFDVNDSEMVPPHEYLARGRKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGFDG 546 MAKGRK +T+RSER LGT Y+QGS + ++ REEDVW +D +R+ + ++ S RR ++HR +GGLSLAF+ +S R+VH+ R E +MATSAPVNVPDWSKILRVDSV S++D +DG ++SEM+PPHEYLAR +KM ANSVFEGVGRTLKGRDL RVRDAVWNQTGFDG Sbjct: 1 MAKGRKLTTSRSERFLGTYAYSQGSAALNP-SELREEDVWGAGDDAGDREWEPHAAALNNSGVSRRRIPRDTEEHRRVGGLSLAFEAPASGSSPRMVHQFRAREEMTSTPRGRHMATSAPVNVPDWSKILRVDSVESIND-EDG---DESEMMPPHEYLARSQKMVANSVFEGVGRTLKGRDLSRVRDAVWNQTGFDG 193
BLAST of Ca_03370 vs. TrEMBL
Match: F6H7M9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0116g01820 PE=4 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 3.664e-46 Identity = 117/216 (54.17%), Postives = 141/216 (65.28%), Query Frame = 1 Query: 1 MAKGRKFSTNRSERLLGT-NYTQGSTVNHEVTDFREEDVWSMVEDR-ERDVNLSSG-------EWDSRA---PSWRRNREQ------DHRNLGGLSLAFDNS-----TRIVHRASQR-------AEHNMATSAPVNVPDWSKILRVDSVGSLHDLDDGFDVNDSEMVPPHEYLAR----GRKMAANSVFEGVGRTLKGRDLRRVRDAVWNQTGFDG 546 MAKGRK +T+RSERLLG+ Y G + ++ EEDVWSMV+D ERD +++ G +W RA P+ R + + D +GGLSLAFD+S +RIVH+ + H+MATSAPVNVPDW KILRVDSV SLHD DD ++ EMVPPHEYLAR RKMAA SV EGVGRTLKGRD+ RVRDAVW+QTGFDG Sbjct: 1 MAKGRKLTTSRSERLLGSFAYGHGQGAGADSSELGEEDVWSMVDDMVERDDHVNGGGGGGGQSDWSPRAGGEPAIRNHHHRRRIPRDDRHQVGGLSLAFDDSGKTASSRIVHQYRPQDGVTPSPRGHHMATSAPVNVPDWHKILRVDSVESLHDSDDDREL---EMVPPHEYLAREYAASRKMAATSVLEGVGRTLKGRDMSRVRDAVWSQTGFDG 213 The following BLAST results are available for this feature:
BLAST of Ca_03370 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25 Position : 0 Zoom : x 1
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BLAST of Ca_03370 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03370_v1.0_kabuli ID=Ca_03370_v1.0_kabuli; Name=Ca_03370; organism=Cicer arietinum; type=mRNA; length=549bpback to top protein sequence of Ca_03370_v1.0_kabuli >Ca_03370_v1.0_kabuli ID=Ca_03370_v1.0_kabuli; Name=Ca_03370_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=182bpback to top mRNA from alignment at Ca7:1062846..1063394- Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03370_v1.0_kabuli ID=Ca_03370_v1.0_kabuli; Name=Ca_03370; organism=Cicer arietinum; type=mRNA; length=549bp; location=Sequence derived from: Ca7:1062846..1063394- (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca7:1062846..1063394- >Ca_03370_v1.0_kabuli ID=Ca_03370_v1.0_kabuli; Name=Ca_03370; organism=Cicer arietinum; type=CDS; length=549bp; location=Sequence derived from: Ca7:1062846..1063394- (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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