Ca_03369, Ca_03369_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03369 vs. TrEMBL
Match: G7JJ61_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g132000 PE=4 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.514e-25 Identity = 81/160 (50.62%), Postives = 89/160 (55.62%), Query Frame = 1 Query: 1 MGNCCTAPSSMEWCGDDWESLKSNQTLXXXXXXXXXXXVFDESHLAQSQRNLCLGNIVDHKNNSNKEKLLGKLRASCDANGKVTLKISRDELAELLGEIXXXXXXXXXXXXXXXXXXXXXXLASAEQVLCRLIKKARDHEIANNHHHSHWKPVLETIPEC 480 MGNCC A SME+ G+DW SLKS++ VFDE+HL DH N LL +LRAS DA+GKVTLKIS+ ELAELLG I L SAEQVL RLI KARDHEIAN H HWKPVLETIPEC Sbjct: 1 MGNCCRAAPSMEFGGEDWGSLKSSKP---KACRSSSSKVFDEAHL-------------DHPQKEND--LLERLRASGDASGKVTLKISKSELAELLGAI--QNSSNNQEPQKQMKKKTTNELGSAEQVLYRLI-KARDHEIANK--HDHWKPVLETIPEC 137
BLAST of Ca_03369 vs. TrEMBL
Match: G7JJ62_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_4g132010 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.129e-24 Identity = 76/159 (47.80%), Postives = 85/159 (53.46%), Query Frame = 1 Query: 1 MGNCCTAPSSMEWCGDDWESLKSNQTLXXXXXXXXXXXVFDESHLAQSQRNLCLGNIVDHKNNSNKEKLLGKLRASCDANGKVTLKISRDELAELLGEIXXXXXXXXXXXXXXXXXXXXXXLASAEQVLCRLIKKARDHEIANNHHHSHWKPVLETIPE 477 MGNCC SSMEW G+DWESL+S VFDE+ L DH N +LGKLRASCDA+GKVTLKIS+ ELAELLG I LASAE+VL RL+ KA+DHE HWKPVLETIPE Sbjct: 1 MGNCCKPSSSMEWVGEDWESLRSKPESRKTKPYPSSSKVFDEASL-------------DHHQKEND--VLGKLRASCDASGKVTLKISKSELAELLGAI-QQNNINSSNQQPKQQMKKKKELASAEEVLFRLM-KAKDHE-------HHWKPVLETIPE 135
BLAST of Ca_03369 vs. TrEMBL
Match: I1MFH0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 4.593e-19 Identity = 72/162 (44.44%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 1 MGNCC---TAPSSMEWCGDDWESLKSNQTLXXXXXXXXXXXVFDESHLAQSQRNLCLGNIVDHKNNSNKEKLLGKLRASCDANGKVTLKISRDELAELLGEIXXXXXXXXXXXXXXXXXXXXXXLASAEQVLCRLIKKARDHEIANNHHHSHWKPVLETIPE 477 MGNCC T SSM+W GDDW SL S++ VFDE H LGN+ KEKLLG LRAS DANGKV +KIS+ EL +LLG ASAEQVL RLI ARDH+ + HH W+PVL++IPE Sbjct: 1 MGNCCASATESSSMDWGGDDWGSLSSSKK-------RRKNKVFDEVH------GESLGNV-------EKEKLLGALRASSDANGKVKIKISKKELEKLLGS-----------EKEINNKQLGEGHASAEQVLARLI-HARDHD---DVHHRPWRPVLQSIPE 127
BLAST of Ca_03369 vs. TrEMBL
Match: I1M107_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 7.835e-19 Identity = 72/164 (43.90%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 1 MGNCC---TAPSSMEWCGDDWESLKSNQTLXXXXXXXXXXXVFDESHLAQSQRNLCLGNIVDHKNNSNKEKLLGKLRASCDANGKVTLKISRDELAELLGEIXXXXXXXXXXXXXXXXXXXXXXLASAEQVLCRLIKKARDHEIANNH--HHSHWKPVLETIPE 477 MGNCC T SSM+W GDDW S S++ VFDE H LGN+ KEKLLG LRAS DANGKV +KIS+ EL +LLG ASAEQVL RLI ARDH H HH W+PVL++IPE Sbjct: 1 MGNCCASATESSSMDWGGDDWGSFSSSKR----RRSSRKNKVFDEVH------GESLGNV-------EKEKLLGALRASSDANGKVKIKISKKELEKLLG-----------GKENNSNKQGDHGHASAEQVLARLI-HARDHASNEYHDVHHRSWRPVLQSIPE 135
BLAST of Ca_03369 vs. TrEMBL
Match: K7MJF8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.280e-18 Identity = 70/159 (44.03%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 1 MGNCCTAPSSMEWCGDDWESLKSNQTLXXXXXXXXXXXVFDESHLAQSQRNLCLGNIVDHKNNSNKEKLLGKLRASCDANGKVTLKISRDELAELLGEIXXXXXXXXXXXXXXXXXXXXXXLASAEQVLCRLIKKARDHEIANNHHHSHWKPVLETIPE 477 MGNCC A SSMEW G+DW L S +T VFDE+H L LG + KEKL+G LRAS DANGKV +KIS+ E ELL ASAEQVL RLI ARD N+ H W PVLE+IPE Sbjct: 1 MGNCCEAASSMEWDGEDWSDLTSKKT--------RSRKVFDEAH--GHGHGLRLGKV-------QKEKLMGSLRASPDANGKVKIKISKKEFEELL-----------LKQEKHVNNKKQLGRASAEQVLLRLI-NARD----NDARHRFWTPVLESIPE 126
BLAST of Ca_03369 vs. TrEMBL
Match: K7MJF9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 3.888e-18 Identity = 67/160 (41.88%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 1 MGNCCTAPSSMEWCGDDWESLKSNQTLXXXXXXXXXXXVFDESHL-AQSQRNLCLGNIVDHKNNSNKEKLLGKLRASCDANGKVTLKISRDELAELLGEIXXXXXXXXXXXXXXXXXXXXXXLASAEQVLCRLIKKARDHEIANNHHHSHWKPVLETIPE 477 MGNCC A SSMEW G+DW L +++ VFDE+H L LGN+ KEKL+ LRA DANGK +KIS+ EL ELL + SAEQVL RL +ARDH+ A H WKPVLE+IPE Sbjct: 1 MGNCCKAASSMEWDGEDWSDLATSKKTSLRK-------VFDEAHAHVHHGHGLSLGNV-------QKEKLMRSLRAFPDANGKANIKISKKELVELLEK-------------QQQTNKKQVGRVSAEQVLLRL-TRARDHDAA---RHGLWKPVLESIPE 129
BLAST of Ca_03369 vs. TrEMBL
Match: K7L3W6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 5.615e-17 Identity = 66/159 (41.51%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 1 MGNCCTAPSSMEWCGDDWESLKSNQTLXXXXXXXXXXXVFDESHLAQSQRNLCLGNIVDHKNNSNKEKLLGKLRASCDANGKVTLKISRDELAELLGEIXXXXXXXXXXXXXXXXXXXXXXLASAEQVLCRLIKKARDHEIANNHHHSHWKPVLETIPE 477 MGNCC SSMEW G+DW L S +T VF+E+H L LG + KEKL+ LR S +ANGKV +KIS+ ELAELL + ASAEQVL RLI ARDH+ H W+P LE+IPE Sbjct: 1 MGNCCKPASSMEWDGEDWSDLTSKKT--------RSSKVFEEAHTHGHGHWLNLGKV-------QKEKLMEALRVSPNANGKVKIKISKKELAELLEK-------------QQHVNKKQVGRASAEQVLLRLI-NARDHDA----RHRLWRPELESIPE 126
BLAST of Ca_03369 vs. TrEMBL
Match: I3S1D7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.359e-15 Identity = 65/160 (40.62%), Postives = 79/160 (49.38%), Query Frame = 1 Query: 1 MGNCC-TAPSSMEWCGDDWESLKSNQTLXXXXXXXXXXXVFDESHLAQSQRNLCLGNIVDHKNNSNKEKLLGKLRASCDANGKVTLKISRDELAELLGEIXXXXXXXXXXXXXXXXXXXXXXLASAEQVLCRLIKKARDHEIANNHHHSHWKPVLETIPE 477 MGNCC SSM W G+DW S S ++ VFDE + L LGN+ +EKL+G LRAS DA+GKV +KIS+ EL +LLG+ ASAEQVL LI ARDH H HWKP L++IPE Sbjct: 1 MGNCCFKTESSMGWDGEDWGSFTSKRS----------SKVFDEG------QGLSLGNV-------EREKLIGMLRASSDADGKVKIKISKKELKKLLGD------QTVKNKQADHEGHGQHGHASAEQVLVGLI-NARDH-----HGDHHWKPALQSIPE 125
BLAST of Ca_03369 vs. TrEMBL
Match: K7MJF5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.529e-14 Identity = 66/160 (41.25%), Postives = 77/160 (48.12%), Query Frame = 1 Query: 1 MGNCCTAPSSMEWCGDDWESLKSNQTLXXXXXXXXXXXVFDESHLAQSQRNLCLGNIVDHKNNSNKEKLLGKLR-ASCDANGKVTLKISRDELAELLGEIXXXXXXXXXXXXXXXXXXXXXXLASAEQVLCRLIKKARDHEIANNHHHSHWKPVLETIPE 477 MGNCC SS EW G+DW L S +T VFDE+H L LG + KEKL+ LR S DANGKV +KISR E AELL + ASAEQVL RLI ARD ++ H W+P LE+IPE Sbjct: 1 MGNCCKPASSTEWDGEDWSDLTSKKT--------RSSKVFDEAH--GHGHGLSLGKV-------QKEKLMEALRVVSPDANGKVRIKISRKEFAELLEK-------------QQQVNKKQVGRASAEQVLLRLI-NARD----DDARHRFWRPELESIPE 125
BLAST of Ca_03369 vs. TrEMBL
Match: I1KNC5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 5.810e-14 Identity = 60/160 (37.50%), Postives = 75/160 (46.88%), Query Frame = 1 Query: 1 MGNCCTAPSSMEWCGDDWESLKSNQTLXXXXXXXXXXXVFDESHLAQSQRNLCLGNIVDHKNNSNKEKLLGKLRASCDANGKVT-LKISRDELAELLGEIXXXXXXXXXXXXXXXXXXXXXXLASAEQVLCRLIKKARDHEIANNHHHSHWKPVLETIPE 477 MGNCC SS W G+DW L +++ VFDE+ + H KEKL+G LRAS DANGK T ++IS+ ELAELL + AS+EQVL RLIK R H+ H W+P LE+IPE Sbjct: 1 MGNCCEPTSSTGWDGEDWSDLTTSKKTRSNK-------VFDET--------------LAHGKVQKKEKLMGPLRASPDANGKATDVRISKKELAELLEK-----------QQVHVNNKKQVGRASSEQVLLRLIKARRHHD----SRHGFWRPDLESIPE 124 The following BLAST results are available for this feature:
BLAST of Ca_03369 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 11
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BLAST of Ca_03369 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03369_v1.0_kabuli ID=Ca_03369_v1.0_kabuli; Name=Ca_03369; organism=Cicer arietinum; type=mRNA; length=483bpback to top protein sequence of Ca_03369_v1.0_kabuli >Ca_03369_v1.0_kabuli ID=Ca_03369_v1.0_kabuli; Name=Ca_03369_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=160bpback to top mRNA from alignment at Ca7:1079381..1079863+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03369_v1.0_kabuli ID=Ca_03369_v1.0_kabuli; Name=Ca_03369; organism=Cicer arietinum; type=mRNA; length=483bp; location=Sequence derived from: Ca7:1079381..1079863+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca7:1079381..1079863+ >Ca_03369_v1.0_kabuli ID=Ca_03369_v1.0_kabuli; Name=Ca_03369; organism=Cicer arietinum; type=CDS; length=483bp; location=Sequence derived from: Ca7:1079381..1079863+ (Cicer arietinumback to top |