Ca_03414, Ca_03414_v1.0_kabuli (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_03414 vs. TrEMBL
Match: I3SV08_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 9.787e-61 Identity = 133/212 (62.74%), Postives = 148/212 (69.81%), Query Frame = 1 Query: 1 MGEIVNLGRG---GPLILSTTIWSCRSHSQLTKLDSVHTKWTRLHHTLYSNARFVCLFSNNKRQEQARKALEGALSGKKNEFEKWGKEIKKREELXXXXXXXXXXXXXXXXXXXXXSNDDNFWQEAKQASXXXXXXXXXXXXVAKGDLILAVIINPLLYALRGVRNGFGLTTSKVMKNTSNGDQPDFD--LKK-GYKSASAKENVVRKWGSD 618 MG+IVNLG G ++L+T WSCRSHSQLTK DS++ KW+ L L +N RF+CLFS+NKRQEQARKALEGALSGKK+E EKW KEIKKREEL SNDDNFWQEAKQA VAKGDLILAVI NPLLYALRGVRNGFG +SKV+KNTS + PDFD LKK Y+ SAKENVVRKWGSD Sbjct: 1 MGDIVNLGAGLGAPSILLTTRKWSCRSHSQLTKHDSLNKKWSSLQRKLNTNGRFLCLFSDNKRQEQARKALEGALSGKKSELEKWDKEIKKREEL-GGGGDTGGGGWFGWGRWFGWSNDDNFWQEAKQAILTILGIILIYLVVAKGDLILAVIFNPLLYALRGVRNGFGFISSKVLKNTSTINGPDFDGFLKKDDYQHVSAKENVVRKWGSD 211
BLAST of Ca_03414 vs. TrEMBL
Match: G7JKI8_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_4g133070 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 3.258e-56 Identity = 133/212 (62.74%), Postives = 144/212 (67.92%), Query Frame = 1 Query: 1 MGEIVNLGRGGPLILSTTIWSCRSHSQLTKLDSVHTKWTRLHHTLYSN-ARFVCLFS-NNKRQEQARKALEGALSGKKNEFEKWGKEIKKREELXXXXXXXXXXXXXXXXXXXXX-SNDDNFWQEAKQASXXXXXXXXXXXXVAKGDLILAVIINPLLYALRGVRNGFGLTTSKVMKNTSNGDQPDFD---LKKGYKSASAKENVVRKWGSD 618 MG IVNL G P ILS RS + SV KW+ LHH L +N +RF CLFS NNKR++QARKALEGALSGKK EFEKW KEIK+REEL SNDDNFWQEAKQAS VAKGDLILA IINPLLYALRGVRNGFGL T+KV+KNTSNGDQPDFD K+GYKSASAKE+VVRKWGSD Sbjct: 1 MGAIVNLVGGVPSILS------RSRHR-----SVDEKWSCLHHKLNTNRSRFTCLFSDNNKREDQARKALEGALSGKKIEFEKWDKEIKRREELGGGGDGGGGGGGWFGWGRWFGWSNDDNFWQEAKQASLTILGIVLIYLLVAKGDLILAAIINPLLYALRGVRNGFGLATTKVLKNTSNGDQPDFDGSLKKEGYKSASAKESVVRKWGSD 201
BLAST of Ca_03414 vs. TrEMBL
Match: C6TKZ1_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 2.582e-53 Identity = 119/209 (56.94%), Postives = 132/209 (63.16%), Query Frame = 1 Query: 1 MGEIVNLGRGGPLILSTTIWSCRSHSQLTKLDSVHTKWTRLHHTLYSNARFVCLFSNNKRQEQARKALEGALSGKKNEFEKWGKEIKKREELXXXXXXXXXXXXXXXXXXXXXSNDDNFWQEAKQASXXXXXXXXXXXXVAKGDLILAVIINPLLYALRGVRNGFGLTTSKVMKNTSNGDQPDF---DLKKGYKSASAKENVVRKWGSD 618 M EI L GGP LST C SHSQ WT L H L N RF+CLFSNN+++EQARKALEGALSGKKNEF+KW KEIK++EEL SNDDNFWQEAKQA VAKGD++LAVI NPLLYALRGVRNGFG +SKV+KNTS +QPDF KK Y+ SA ENVVRKWGSD Sbjct: 1 MAEIQILNLGGPPSLSTRKLPCHSHSQ---------NWTCLQHKLKCNGRFLCLFSNNRKEEQARKALEGALSGKKNEFDKWNKEIKRKEELGGGGDTGGGGWFGWGKRFGW-SNDDNFWQEAKQAILTILGLVLVYLLVAKGDVLLAVIFNPLLYALRGVRNGFGFISSKVLKNTSTSNQPDFGGLSQKKAYQHTSAMENVVRKWGSD 199
BLAST of Ca_03414 vs. TrEMBL
Match: I1KNI8_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 9.810e-53 Identity = 117/209 (55.98%), Postives = 136/209 (65.07%), Query Frame = 1 Query: 1 MGEIVNLGRGGPLILSTTIWSCRSHSQLTKLDSVHTKWTRLHHTLYSNARFVCLFSNNKRQEQARKALEGALSGKKNEFEKWGKEIKKREELXXXXXXXXXXXXXXXXXXXXXSNDDNFWQEAKQASXXXXXXXXXXXXVAKGDLILAVIINPLLYALRGVRNGFGLTTSKVMKNTSNGDQPDFD---LKKGYKSASAKENVVRKWGSD 618 + EI+NLG G P + + CRS+SQ WT L H L N RF+CLFS+N+++EQARKALEGALSGKKNEF+KW KEIK+REEL SNDDNFWQEAKQA +AKGD++LAVI NPLLYALRGVRNGFG +SKV+KNTS +QPDFD KK Y+ SAKENVVRKWGSD Sbjct: 3 VAEILNLG-GPPSLSGRKLPPCRSNSQ---------NWTCLQHKLKCNGRFLCLFSDNRKEEQARKALEGALSGKKNEFDKWDKEIKRREELGGGGDTGGGGWFGWGRWFGW-SNDDNFWQEAKQAILTILGLVVVYLLIAKGDMLLAVIFNPLLYALRGVRNGFGFISSKVLKNTSTSNQPDFDGLSKKKAYQHTSAKENVVRKWGSD 200
BLAST of Ca_03414 vs. TrEMBL
Match: F6HRM1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0187g00200 PE=4 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 7.546e-37 Identity = 85/177 (48.02%), Postives = 107/177 (60.45%), Query Frame = 1 Query: 97 SVHTKWTRLHHTLYSNARFVCLFSNNKRQEQARKALEGALSGKKNEFEKWGKEIKKREELXXXXXXXXXXXXXXXXXXXXXSNDDNFWQEAKQASXXXXXXXXXXXXVAKGDLILAVIINPLLYALRGVRNGFGLTTSKVMKNTSNGDQPDFD---LKKGYKSASAKENVVRKWGSD 618 +++ KW L L N RF CLFSNN++QE+ARKALE AL GKK+EFEKW KEIKKREE+ SNDD+FWQEA+QAS +AKG+++LAVI NPLL+ALRG RNGF S++++ S D K+ Y SAKE+VVRKWG + Sbjct: 33 TLNPKWAFLQQKLKCNGRFSCLFSNNRKQEEARKALESALGGKKDEFEKWNKEIKKREEV-GGGGEAGGGGWFGWGGRFGWSNDDHFWQEAQQASLAILGIIIMYLIIAKGEVLLAVIFNPLLFALRGTRNGFNFIISRILQKVSPATHTGLDNMPKKEVYTPVSAKESVVRKWGGE 208
BLAST of Ca_03414 vs. TrEMBL
Match: B9IH82_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_575946 PE=4 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 4.891e-36 Identity = 91/184 (49.46%), Postives = 107/184 (58.15%), Query Frame = 1 Query: 76 SQLTKLDSVHTKWTRLHHTLYSNARFVCLFSNNKRQEQARKALEGALSGKKNEFEKWGKEIKKREELXXXXXXXXXXXXXXXXXXXXXSNDDNFWQEAKQASXXXXXXXXXXXXVAKGDLILAVIINPLLYALRGVRNGFGLTTSKVMKNTSNGDQPDF--DLKKG-YKSASAKENVVRKWGSD 618 SQ K D H+ WT L N +F CLFS R+EQA+KALE AL GKK+EFEKW KEIK+REE SN DNFW EA+QAS +AKGDLILAV++NPLLYALRG RNG +SK+++ S D DF LK G Y SAKE+V RKWGS+ Sbjct: 25 SQRQKQDVKHS-WTSLQREFKCNGKFTCLFSGGGREEQAKKALESALGGKKDEFEKWNKEIKRREEAGGGGDSGGGGWFGWGGRFGW-SNGDNFWPEAQQASLAVLGIIAMYLIIAKGDLILAVMVNPLLYALRGTRNGLTFMSSKMLRKASPDDPADFAGALKNGVYVEVSAKESVKRKWGSN 206
BLAST of Ca_03414 vs. TrEMBL
Match: M5WV92_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011534mg PE=4 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 4.141e-35 Identity = 84/171 (49.12%), Postives = 104/171 (60.82%), Query Frame = 1 Query: 112 WTRLHHTLYSNARFVCLFSNNKRQEQARKALEGALSGKKNEFEKWGKEIKKREELXXXXXXXXXXXXXXXXXXXXXSNDDNFWQEAKQASXXXXXXXXXXXXVAKGDLILAVIINPLLYALRGVRNGFGLTTSKVMKNTSNGDQPDFD---LKKGYKSASAKENVVRKWGS 615 WT L L RF CLFS+N+++EQARKALEGAL GKK+EFEKW KEIK+REE+ SN D+FW+EA+QAS +AKG+L+LAVI NPLLYALRG RN F TSK+++ Q FD + Y S SAK++V+RKWGS Sbjct: 37 WTALLFKLKCRGRFSCLFSDNRKEEQARKALEGALGGKKSEFEKWDKEIKRREEV-GGGGSAGGGGWFGWRGWFGWSNGDHFWREAQQASLAVLGIILMYLIIAKGELMLAVIFNPLLYALRGTRNVFAFITSKILRKRGPDGQVVFDNISKNEAYSSVSAKDSVLRKWGS 206
BLAST of Ca_03414 vs. TrEMBL
Match: B9S3J2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0669600 PE=4 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 4.141e-35 Identity = 94/214 (43.93%), Postives = 119/214 (55.61%), Query Frame = 1 Query: 1 MGEIVNLGRGGPLILSTTIWSCRSHSQLTKLDSVHTK--WTRLHHTLYSNARFVCLFS---NNKRQEQARKALEGALSGKKNEFEKWGKEIKKREELXXXXXXXXXXXXXXXXXXXXXSNDDNFWQEAKQASXXXXXXXXXXXXVAKGDLILAVIINPLLYALRGVRNGFGLTTSKVMKNTSNGDQPDF---DLKKGYKSASAKENVVRKWGSD 618 M ++VNL S + WS + L D+ + K W L L NA+F CLFS +++++EQARKALE AL GKK+EFEKW KEI+KREE SN DNFW EA+Q + VAKG+++LAVIINP L+ALRG RNG +S+++KNTS DF K Y ASAKE V+RKWGSD Sbjct: 1 MAQVVNLN-------SLSCWSRPDSAGLRFHDAENGKQSWVSLQQQLKCNAKFTCLFSGSSSSRKEEQARKALESALGGKKSEFEKWNKEIQKREEAGGGGTSGGGGWFGWGGRFGW-SNGDNFWPEAQQTALAILGIVAMYLVVAKGEMMLAVIINPSLHALRGTRNGLAFISSRILKNTSPNSPADFGDTSKKDVYVQASAKERVLRKWGSD 206
BLAST of Ca_03414 vs. TrEMBL
Match: K4D633_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc11g012280.1 PE=4 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 5.062e-33 Identity = 81/169 (47.93%), Postives = 98/169 (57.99%), Query Frame = 1 Query: 121 LHHTLYSNARFVCLFSNNKRQEQARKALEGALSGKKNEFEKWGKEIKKREELXXXXXXXXXXXXXXXXXXXXXSNDDNFWQEAKQASXXXXXXXXXXXXVAKGDLILAVIINPLLYALRGVRNGFGLTTSKVMKNTSNGDQPDFDL---KKGYKSASAKENVVRKWGSD 618 L H L SN RF CLFS+N++Q++ARKALE AL GKK EFEKW KEIK+REE S D +FWQEA+QA+ V KGD++LAVI NPLL+ LRGVRNGF TS++M+ Q F ++ SAKE V RKWGSD Sbjct: 46 LQHKLQSNGRFSCLFSDNRKQDEARKALESALGGKKTEFEKWDKEIKRREE-AGGGDNSGGGGWFNWRRWFGGSEDGHFWQEAQQATLAILGIIVMYLIVTKGDVMLAVIFNPLLFTLRGVRNGFTFVTSQIMRKVYPASQDSFGTISPEEVPSRVSAKETVARKWGSD 213
BLAST of Ca_03414 vs. TrEMBL
Match: M1B177_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400013349 PE=4 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 4.285e-32 Identity = 79/169 (46.75%), Postives = 96/169 (56.80%), Query Frame = 1 Query: 121 LHHTLYSNARFVCLFSNNKRQEQARKALEGALSGKKNEFEKWGKEIKKREELXXXXXXXXXXXXXXXXXXXXXSNDDNFWQEAKQASXXXXXXXXXXXXVAKGDLILAVIINPLLYALRGVRNGFGLTTSKVMKNTSNGDQPDFDL---KKGYKSASAKENVVRKWGSD 618 L H L N RF CLFS+N++Q++ARKALE AL GKK EFEKW KEIK+REE S D +FWQEA+QA+ V KGD++LAVI NPLL+ LRG RNGF TS++M+ Q F ++ SAKE V RKWGSD Sbjct: 46 LQHKLQCNGRFFCLFSDNRKQDEARKALESALGGKKTEFEKWDKEIKRREE-AGGGDNSGGGGWFNWRRWFGGSEDGHFWQEAQQATLAILGIIVMYLIVTKGDVMLAVIFNPLLFTLRGARNGFTFVTSQIMRKVYPASQDSFGTMSPEEVPSRVSAKETVARKWGSD 213 The following BLAST results are available for this feature:
BLAST of Ca_03414 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL) Total hits: 25
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BLAST of Ca_03414 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot) Total hits: 0
Expression
Available Analyses Select an Expression Analysis Select a property to group and sort biological samples Select a property to color biological samples Hover the mouse over a column in the graph to view more information about that biological sample. You can click and drag to rearrange groups along the x-axis. You can also click and drag to move the legend. InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_03414_v1.0_kabuli ID=Ca_03414_v1.0_kabuli; Name=Ca_03414; organism=Cicer arietinum; type=mRNA; length=621bpback to top protein sequence of Ca_03414_v1.0_kabuli >Ca_03414_v1.0_kabuli ID=Ca_03414_v1.0_kabuli; Name=Ca_03414_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=206bpback to top mRNA from alignment at Ca7:690061..692011+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_03414_v1.0_kabuli ID=Ca_03414_v1.0_kabuli; Name=Ca_03414; organism=Cicer arietinum; type=mRNA; length=1951bp; location=Sequence derived from: Ca7:690061..692011+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca7:690061..692011+ >Ca_03414_v1.0_kabuli ID=Ca_03414_v1.0_kabuli; Name=Ca_03414; organism=Cicer arietinum; type=CDS; length=621bp; location=Sequence derived from: Ca7:690061..692011+ (Cicer arietinumback to top |