Ca_16179, Ca_16179_v1.0_kabuli (mRNA) Cicer arietinum

Transcript Overview
NameCa_16179
Unique NameCa_16179_v1.0_kabuli
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length360
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca7chromosomeCa7:33615041..33618718 +Cicer arietinum CDC Frontier genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsR635Pisum sativum Cameor genome v1aPisum sativum
capsR645Pisum sativum Cameor genome v1aPisum sativum
cavuR587Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR609Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR647Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
cavuR648Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvR681Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR730Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
capvR766Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caccR0973Cajanus cajan Asha genome v1.0Cajanus cajan
caccR0994Cajanus cajan Asha genome v1.0Cajanus cajan
caccR1019Cajanus cajan Asha genome v1.0Cajanus cajan
ancaL0204Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0261Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0408Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0461Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0657Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL0863Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaL1232Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaL344Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaL589Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cazwsR561Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
cazwsR567Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
catifR592Vicia faba cv. Tiffany genome v1.0Vicia faba
catifR638Vicia faba cv. Tiffany genome v1.0Vicia faba
cavfhR607Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR645Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavfhR654Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
cavrvR644Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavrvR652Vigna radiata cv. VC1973A genome v6.0Vigna radiata
cavssR669Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR711Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavssR719Vicia sativa cv. Studenica genome v1.0Vicia sativa
cavuaR556Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR620Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cavuaR621Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
cacanR317Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
cacanR318Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaL206Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL301Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL590Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjcaL591Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
cacarR582Cicer arietinum
cacarR587Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_05083Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.4g056400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat04G0566000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Tiffany.R1.4g044200.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat4g166320.1Pisum sativum Cameor genome v1aPisum sativum
Phvul.010G124900.4Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va11G005870.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr10.1512Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan11g004900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun10g159500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg16017.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004510499.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_16179-CDS1Ca_16179-CDS1Cicer arietinumCDS
Ca_16179-CDS2Ca_16179-CDS2Cicer arietinumCDS
Ca_16179-CDS3Ca_16179-CDS3Cicer arietinumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_16179_v1.0_kabuliCa_16179_v1.0_kabuliCicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_16179 vs. SwissProt
Match: RM51_SCHPO (54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrpl51 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 7.213e-12
Identity = 31/105 (29.52%), Postives = 60/105 (57.14%), Query Frame = 1 
Query:   28 QKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWT 342
            +++  SY +WGGSS+G++ F+ + L +  + +  +E      +G+HP ++A+Y    E+V+C R M A  +   A   R++ G K   ++    + +PSV+G W+
Sbjct:   24 RRIEFSYCNWGGSSKGMKEFLSTKLESLAKESQDVEFHVTNRQGKHPLIRAYYNTGREKVICTRKMSASSIFQKAILCRDSDGLKPRLIKYPVESTNPSVRGIWS 128
[Close]
BLAST of Ca_16179 vs. SwissProt
Match: RM51_ASHGO (54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MRPL51 PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 8.818e-10
Identity = 38/117 (32.48%), Postives = 63/117 (53.85%), Query Frame = 1 
Query:   16 VWQLQKLIVSYSDWGGSSRGIRAFMES-HLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTK-------HPSVQGTWT 342
            ++  +K+ + Y +WGGSS+G+R F+ S  L  + E  PQ++    + +  HP LKA Y N   + +CVRN++ + V L    LR + G ++     RH  K       + SV+G W+
Sbjct:   20 IFPCKKITLQYCNWGGSSQGLRDFLTSKRLAKWAEKYPQIQFEV-VAKAGHPVLKAEYINGLNKAICVRNLNVDHVELKLKLLRESSGAQL-----RHYPKNANVLSLNQSVRGVWS 130
[Close]
BLAST of Ca_16179 vs. SwissProt
Match: RM51_YEAST (54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL51 PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.663e-8
Identity = 35/113 (30.97%), Postives = 66/113 (58.41%), Query Frame = 1 
Query:   16 VWQLQKLIVSYSDWGGSSRGIRAFMES-HLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRH---VTKHPSVQGTWT 342
            V+  +K+ + + +WGGSS G+R F+ S  L  + +  P ++    M +  HP L+A Y N  E+V+CVRN++ + V      L+++ G  +++ RT++    + + SV+G W+
Sbjct:   20 VFPCRKITLQFCNWGGSSEGMRKFLTSKRLDKWGQEFPWIQFEV-MRKSGHPLLRAEYTNGREKVICVRNLNIDNVENKLKLLKDSDG-DILRRRTKNDNVESLNSSVRGIWS 130
[Close]
BLAST of Ca_16179 vs. SwissProt
Match: RM43_MOUSE (39S ribosomal protein L43, mitochondrial OS=Mus musculus GN=Mrpl43 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.172e-8
Identity = 39/111 (35.14%), Postives = 53/111 (47.75%), Query Frame = 1 
Query:   10 RGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWT 342
            R V QLQ+L +S S    SSRG R F+E  +  F   NP + V         P + A Y N   R   V +   EE+     +L +  G  VI++R    T +PS+QG WT
Sbjct:   21 RYVQQLQRLSLSLSRDAPSSRGAREFVEREVTDFARRNPGVVVYVNPRPCAMPRIVAEYLNGAVREENVNSKSVEEIKSLVQKLADQSGLDVIRIRKPFHTDNPSIQGQWT 131
[Close]
BLAST of Ca_16179 vs. SwissProt
Match: RM43_HUMAN (39S ribosomal protein L43, mitochondrial OS=Homo sapiens GN=MRPL43 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.408e-7
Identity = 37/110 (33.64%), Postives = 51/110 (46.36%), Query Frame = 1 
Query:   10 RGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTW 339
            R V QLQ+L  S S  G SSRG R F+E  +  F   NP + +         P + A Y N   R   +     EE+     +L +  G  VI++R    T +PS+QG W
Sbjct:   21 RYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLDVIRIRKPFHTDNPSIQGQW 130
[Close]
BLAST of Ca_16179 vs. TrEMBL
Match: G7L937_MEDTR (Mitochondrial ribosomal protein L43 OS=Medicago truncatula GN=MTR_8g022770 PE=4 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 1.196e-59
Identity = 110/119 (92.44%), Postives = 117/119 (98.32%), Query Frame = 1 
Query:    1 MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 357
            MALRGVWQL+KL+VS+SDWGGSSRGIRAFMESHLPAFKE+NPQLEV TEMIRGQHPHLKAFYKNHN+RVVCV+NMD EE+LLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY
Sbjct:    1 MALRGVWQLKKLVVSFSDWGGSSRGIRAFMESHLPAFKEANPQLEVDTEMIRGQHPHLKAFYKNHNDRVVCVKNMDPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 119
[Close]
BLAST of Ca_16179 vs. TrEMBL
Match: I3SD48_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 1.012e-58
Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 1 
Query:    1 MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 357
            MALRGVWQL+KL+VS+SDWGGSSRGIRAFMESHLPAFKE+NPQLEV TEMIRGQHPHLKAFYKN N+RVVCV+NMD EE+LLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY
Sbjct:    1 MALRGVWQLKKLVVSFSDWGGSSRGIRAFMESHLPAFKEANPQLEVDTEMIRGQHPHLKAFYKNRNDRVVCVKNMDPEEILLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 119
[Close]
BLAST of Ca_16179 vs. TrEMBL
Match: A5C6I0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0094g00450 PE=4 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 2.111e-56
Identity = 105/118 (88.98%), Postives = 113/118 (95.76%), Query Frame = 1 
Query:    1 MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALK 354
            MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTE+IRGQHPHLK FYKN NERV+CV+NM  E+VL HATRLRNALGRKV+KL+TRHVTKHPSVQGTWTTA++
Sbjct:    1 MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTELIRGQHPHLKGFYKNKNERVICVKNMTPEDVLHHATRLRNALGRKVLKLKTRHVTKHPSVQGTWTTAMR 118
[Close]
BLAST of Ca_16179 vs. TrEMBL
Match: I3T9B3_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=4 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 4.702e-56
Identity = 104/119 (87.39%), Postives = 113/119 (94.96%), Query Frame = 1 
Query:    1 MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 357
            MALRGVWQL+KLIVSYSDWGGSS+GIRAFMESHLP FKE NPQLEVVTEMIRGQHPHLK FY+N N+RVVCV+N+D E++LL ATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTA+KY
Sbjct:    1 MALRGVWQLRKLIVSYSDWGGSSKGIRAFMESHLPEFKEKNPQLEVVTEMIRGQHPHLKGFYENKNQRVVCVKNLDPEDILLQATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTAVKY 119
[Close]
BLAST of Ca_16179 vs. TrEMBL
Match: I1MVQ6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 4.702e-56
Identity = 102/119 (85.71%), Postives = 113/119 (94.96%), Query Frame = 1 
Query:    1 MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 357
            MALRGVWQL KLIVSY +WGGSSRGIRAFMESHLP FKE NPQLEVVTE+IRGQHPHLKA+YKN N+RV+CV+NMD E++LLHATRLRNALGRKV+KLRTRHVTKHPSVQGTWTTA++Y
Sbjct:    1 MALRGVWQLNKLIVSYCNWGGSSRGIRAFMESHLPTFKEKNPQLEVVTELIRGQHPHLKAYYKNKNQRVICVKNMDPEDILLHATRLRNALGRKVVKLRTRHVTKHPSVQGTWTTAVEY 119
[Close]
BLAST of Ca_16179 vs. TrEMBL
Match: M0T142_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 8.020e-56
Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = 1 
Query:    1 MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 357
            MALRGVWQLQKLIVSY DWGGSSRGIR FME+HLPAFKE NPQLEVV E++RGQHPHLK FYKNHN+RVVCV+N+  E+VLLHAT+LRNALGRKV+KLRTRHVTKHPSVQGTWTTALK+
Sbjct:    1 MALRGVWQLQKLIVSYCDWGGSSRGIRGFMETHLPAFKEKNPQLEVVMELVRGQHPHLKGFYKNHNQRVVCVKNLMPEDVLLHATKLRNALGRKVVKLRTRHVTKHPSVQGTWTTALKF 119
[Close]
BLAST of Ca_16179 vs. TrEMBL
Match: I3S349_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=4 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 3.980e-55
Identity = 102/119 (85.71%), Postives = 111/119 (93.28%), Query Frame = 1 
Query:    1 MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 357
            MALRGVWQL+KLIVSYSDWGGSS+GIRAFMESHLP FKE NPQLEVVTEMIRGQHPHLK FY+N N+RV+CV+NMD E++LL  TRLRNALGRKVIKLRTRHVTKHPSVQGTWTTA+ Y
Sbjct:    1 MALRGVWQLRKLIVSYSDWGGSSKGIRAFMESHLPEFKEKNPQLEVVTEMIRGQHPHLKGFYENKNQRVICVKNMDPEDILLQTTRLRNALGRKVIKLRTRHVTKHPSVQGTWTTAVTY 119
[Close]
BLAST of Ca_16179 vs. TrEMBL
Match: I1K2A2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 5.748e-54
Identity = 100/119 (84.03%), Postives = 111/119 (93.28%), Query Frame = 1 
Query:    1 MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 357
            MALRGVWQL KLIVSY +WGGSSRGIRAFMESHLPAFKE NPQLEVVTE+IRGQHPHLK +YKN N+RV+ V+NMD E++LLHATRLRNALGRKV+KLRTRHVTK PSVQGTWTTA++Y
Sbjct:    1 MALRGVWQLNKLIVSYCNWGGSSRGIRAFMESHLPAFKEKNPQLEVVTELIRGQHPHLKGYYKNKNQRVISVKNMDPEDILLHATRLRNALGRKVVKLRTRHVTKRPSVQGTWTTAVEY 119
[Close]
BLAST of Ca_16179 vs. TrEMBL
Match: C5Z7Y2_SORBI (Putative uncharacterized protein Sb10g009060 OS=Sorghum bicolor GN=Sb10g009060 PE=4 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 8.300e-53
Identity = 98/118 (83.05%), Postives = 108/118 (91.53%), Query Frame = 1 
Query:    1 MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALK 354
            MALRGVWQLQKL+V+Y DWGGSSRGIRAFME+HLPAFKE NP LEVVTE++RGQHP+LK  YKNHNERVVCVRN+  EE+LL ATRLRN+LGRKV+KLRTRHVTK PSVQGTWTT LK
Sbjct:    1 MALRGVWQLQKLVVNYCDWGGSSRGIRAFMEAHLPAFKEKNPHLEVVTELVRGQHPNLKGIYKNHNERVVCVRNLPPEEILLQATRLRNSLGRKVVKLRTRHVTKRPSVQGTWTTELK 118
[Close]
BLAST of Ca_16179 vs. TrEMBL
Match: M5Y5A0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013515mg PE=4 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.416e-52
Identity = 98/119 (82.35%), Postives = 110/119 (92.44%), Query Frame = 1 
Query:    1 MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTALKY 357
            MALRG WQLQKLIVS+SDWGGSSRGIR+FMES+LP FKE NPQLEVVTE+IRGQHPHLK  YKN +ERVVCV+NMD EEVL +ATRLRN+LGRKV+KL+TRHVTKHPSVQGTWTT +K+
Sbjct:    1 MALRGAWQLQKLIVSFSDWGGSSRGIRSFMESYLPVFKEKNPQLEVVTELIRGQHPHLKGLYKNKSERVVCVKNMDPEEVLQYATRLRNSLGRKVVKLKTRHVTKHPSVQGTWTTDVKF 119
[Close]
BLAST of Ca_16179 vs. DB:Swiss
Match: RM51_SCHPO (54S ribosomal protein L51, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl51 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.841e-15
Identity = 31/106 (29.25%), Postives = 60/106 (56.60%), Query Frame = 1 
Query:   25 LQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWT 342
             +++  SY +WGGSS+G++ F+ + L +  + +  +E      +G+HP ++A+Y    E+V+C R M A  +   A   R++ G K   ++    + +PSV+G W+
Sbjct:   23 CRRIEFSYCNWGGSSKGMKEFLSTKLESLAKESQDVEFHVTNRQGKHPLIRAYYNTGREKVICTRKMSASSIFQKAILCRDSDGLKPRLIKYPVESTNPSVRGIWS 128
[Close]
BLAST of Ca_16179 vs. DB:Swiss
Match: RM51_ASHGO (54S ribosomal protein L51, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MRPL51 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.539e-12
Identity = 38/117 (32.48%), Postives = 63/117 (53.85%), Query Frame = 1 
Query:   16 VWQLQKLIVSYSDWGGSSRGIRAFMES-HLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHP-------SVQGTWT 342
            ++  +K+ + Y +WGGSS+G+R F+ S  L  + E  PQ++    + +  HP LKA Y N   + +CVRN++ + V L    LR + G ++     RH  K+        SV+G W+
Sbjct:   20 IFPCKKITLQYCNWGGSSQGLRDFLTSKRLAKWAEKYPQIQFEV-VAKAGHPVLKAEYINGLNKAICVRNLNVDHVELKLKLLRESSGAQL-----RHYPKNANVLSLNQSVRGVWS 130
[Close]
BLAST of Ca_16179 vs. DB:Swiss
Match: RM51_YEAST (54S ribosomal protein L51, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL51 PE=1 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 1.145e-11
Identity = 38/115 (33.04%), Postives = 67/115 (58.26%), Query Frame = 1 
Query:   16 VWQLQKLIVSYSDWGGSSRGIRAFMES-HLPAFKESNP--QLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHV---TKHPSVQGTWT 342
            V+  +K+ + + +WGGSS G+R F+ S  L  + +  P  Q EV   M +  HP L+A Y N  E+V+CVRN++ + V      L+++ G  +++ RT++    + + SV+G W+
Sbjct:   20 VFPCRKITLQFCNWGGSSEGMRKFLTSKRLDKWGQEFPWIQFEV---MRKSGHPLLRAEYTNGREKVICVRNLNIDNVENKLKLLKDSDG-DILRRRTKNDNVESLNSSVRGIWS 130
[Close]
BLAST of Ca_16179 vs. DB:Swiss
Match: RM43_MOUSE (39S ribosomal protein L43, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl43 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 3.126e-10
Identity = 39/113 (34.51%), Postives = 54/113 (47.79%), Query Frame = 1 
Query:   10 RGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTWTTA 348
            R V QLQ+L +S S    SSRG R F+E  +  F   NP + V         P + A Y N   R   V +   EE+     +L +  G  VI++R    T +PS+QG WT +
Sbjct:   21 RYVQQLQRLSLSLSRDAPSSRGAREFVEREVTDFARRNPGVVVYVNPRPCAMPRIVAEYLNGAVREENVNSKSVEEIKSLVQKLADQSGLDVIRIRKPFHTDNPSIQGQWTPS 133
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BLAST of Ca_16179 vs. DB:Swiss
Match: RM43_HUMAN (39S ribosomal protein L43, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL43 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 5.482e-9
Identity = 37/110 (33.64%), Postives = 51/110 (46.36%), Query Frame = 1 
Query:   10 RGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTW 339
            R V QLQ+L  S S  G SSRG R F+E  +  F   NP + +         P + A Y N   R   +     EE+     +L +  G  VI++R    T +PS+QG W
Sbjct:   21 RYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLDVIRIRKPFHTDNPSIQGQW 130
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BLAST of Ca_16179 vs. DB:Swiss
Match: RM43_BOVIN (39S ribosomal protein L43, mitochondrial OS=Bos taurus OX=9913 GN=MRPL43 PE=2 SV=2)

HSP 1 Score: 52.373 bits (124), Expect = 2.594e-8
Identity = 36/110 (32.73%), Postives = 49/110 (44.55%), Query Frame = 1 
Query:   10 RGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEMIRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRTRHVTKHPSVQGTW 339
            R V QLQ+L  S S    SSRG R F+E  +  F   NP + +         P + A Y N   R   +     EE+     +L +  G  VI++R    T  PS+QG W
Sbjct:   21 RYVQQLQRLSFSLSRDAPSSRGAREFVEREVTDFARRNPGVVIYVNPRPCCVPRVVAEYLNGAVREESLNCKSVEEIATLVQKLADQSGLDVIRIRKPFHTDSPSIQGQW 130
The following BLAST results are available for this feature:
BLAST of Ca_16179 vs. SwissProt
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
RM51_SCHPO7.213e-1229.5254S ribosomal protein L51, mitochondrial OS=Schizo... [more]
RM51_ASHGO8.818e-1032.4854S ribosomal protein L51, mitochondrial OS=Ashbya... [more]
RM51_YEAST1.663e-830.9754S ribosomal protein L51, mitochondrial OS=Saccha... [more]
RM43_MOUSE2.172e-835.1439S ribosomal protein L43, mitochondrial OS=Mus mu... [more]
RM43_HUMAN1.408e-733.6439S ribosomal protein L43, mitochondrial OS=Homo s... [more]
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BLAST of Ca_16179 vs. TrEMBL
Analysis Date: 2013-10-24 (Homology Analysis: Kabuli C.arietinum mRNA vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
G7L937_MEDTR1.196e-5992.44Mitochondrial ribosomal protein L43 OS=Medicago tr... [more]
I3SD48_MEDTR1.012e-5891.60Uncharacterized protein OS=Medicago truncatula PE=... [more]
A5C6I0_VITVI2.111e-5688.98Putative uncharacterized protein OS=Vitis vinifera... [more]
I3T9B3_LOTJA4.702e-5687.39Uncharacterized protein OS=Lotus japonicus PE=4 SV... [more]
I1MVQ6_SOYBN4.702e-5685.71Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
M0T142_MUSAM8.020e-5685.71Uncharacterized protein OS=Musa acuminata subsp. m... [more]
I3S349_LOTJA3.980e-5585.71Uncharacterized protein OS=Lotus japonicus PE=4 SV... [more]
I1K2A2_SOYBN5.748e-5484.03Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
C5Z7Y2_SORBI8.300e-5383.05Putative uncharacterized protein Sb10g009060 OS=So... [more]
M5Y5A0_PRUPE1.416e-5282.35Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]

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BLAST of Ca_16179 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum CDC Frontier (kabuli), Swissprot)
Total hits: 6
Match NameE-valueIdentityDescription
RM51_SCHPO1.841e-1529.2554S ribosomal protein L51, mitochondrial OS=Schizo... [more]
RM51_ASHGO2.539e-1232.4854S ribosomal protein L51, mitochondrial OS=Ashbya... [more]
RM51_YEAST1.145e-1133.0454S ribosomal protein L51, mitochondrial OS=Saccha... [more]
RM43_MOUSE3.126e-1034.5139S ribosomal protein L43, mitochondrial OS=Mus mu... [more]
RM43_HUMAN5.482e-933.6439S ribosomal protein L43, mitochondrial OS=Homo s... [more]
RM43_BOVIN2.594e-832.7339S ribosomal protein L43, mitochondrial OS=Bos ta... [more]
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InterPro
Analysis Name: InterProScan analysis for kabuli C. arietinum unigenes
Date Performed: 2013-10-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 26..76
score: 8.3
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916Mitochondrial ribosomal protein L51 / Scoord: 18..91
score: 1.1
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 8..92
score: 8.5
NoneNo IPR availablePANTHERPTHR21396FAMILY NOT NAMEDcoord: 1..114
score: 3
NoneNo IPR availableSEGsegsegcoord: 8..23
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_16179_v1.0_kabuli ID=Ca_16179_v1.0_kabuli; Name=Ca_16179; organism=Cicer arietinum; type=mRNA; length=360bp
ATGGCTTTGCGAGGAGTTTGGCAACTTCAGAAGCTCATTGTTAGCTACAG
CGATTGGGGTGGAAGTAGCAGAGGTATAAGGGCATTTATGGAGTCGCATT
TGCCAGCGTTTAAGGAGTCGAATCCTCAGTTAGAAGTGGTTACTGAAATG
ATTCGTGGTCAACATCCACATCTAAAGGCTTTTTACAAGAATCATAACGA
GCGAGTTGTATGTGTGAGGAATATGGATGCGGAAGAGGTACTTCTGCATG
CAACCAGGCTAAGGAATGCACTTGGAAGGAAAGTAATTAAACTGAGGACA
AGACATGTAACCAAACATCCTAGTGTGCAAGGTACATGGACAACTGCTTT
GAAATATTAG
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protein sequence of Ca_16179_v1.0_kabuli

>Ca_16179_v1.0_kabuli ID=Ca_16179_v1.0_kabuli; Name=Ca_16179_v1.0_kabuli; organism=Cicer arietinum; type=polypeptide; length=119bp
MALRGVWQLQKLIVSYSDWGGSSRGIRAFMESHLPAFKESNPQLEVVTEM
IRGQHPHLKAFYKNHNERVVCVRNMDAEEVLLHATRLRNALGRKVIKLRT
RHVTKHPSVQGTWTTALKY
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mRNA from alignment at Ca7:33615041..33618718+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_16179_v1.0_kabuli ID=Ca_16179_v1.0_kabuli; Name=Ca_16179; organism=Cicer arietinum; type=mRNA; length=3678bp; location=Sequence derived from: Ca7:33615041..33618718+ (Cicer arietinum
ATGGCTTTGCGAGGAGTTTGGCAACTTCAGAAGCTCATTGTTAGCTACAG
CGATTGGGGTGGAAGTAGCAGAGGTATAAGGTATAATTACTACTATCTCC
TCACACGCTTCGATTTTCCATTTCATCAATTTTTTCTTTCGGTTTCGGCA
TTTGGATTTGTGGAATTATCGACAAGACAAATTTTCTTGCTTAATTCCTA
ACCTAAAATCACGATCATATAAACATGTACTTGATGATTCAATCATCGTG
CTTTTTGGAATAGATTTTGTTTGAACTTGAATTTCAGGTTCTGCATTTGG
TGTCATGTAACATCATTGGTGCTGCTTTTTTCGACAAAAAAAAGAAGAAT
TAATTAAGTTTTGAGGCGCCAATATTTGTTTTTTCTTGTTTGGTTTCATG
CGATGACAATTGACAAGGAGGATTGTGAGCTTTTAGGATGGTGGCGGAGC
TTGGTAGGGACAGGGGGTGGCCGCGGCCACCCAAAAAGAAAACAAAATTA
TAGGTTCAGTCTCTCTTCCTCTCTTTCAGATTCAGATTCGGTCTCTCTTC
CTCTCTTCCAGATCCAGTCTTCATCTATCTCTTTACCTCTTGCTTTCTGA
ACGCAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACGATTCCA
CCCTCTTGCCATCTTGTGCTGTTGATGCCTTGCCTCGCTTCAGCTCGTCT
TGGCCTCGTCCCGCCTTGCCTCTGACTCGTCTCGCCTTGCCTCTGACTCG
TCTCGCATCAGCTTGCCTCGCCTCACCTCGGACTTTGTTGATTTGTTGAT
TTGCTGATTTTCCTGATTTGCTTAACAAGGTGTTTGAACAATGTTTGTTC
TGATTTGCTGATTTTTGTTGCATACAAGGTGTTTGTGCTTTTGCTAAATT
GCTAAAGTGTTGTTGCATACAAGGTGTTTGCTGATTTGCTAAAGTGTTAA
TTAACTAAAGTGTTGGTTGTCTCTTTAGAATGATTGCTAAATTGTTGGAT
GCCTGTTTAGAATGATGGCTAAATTGTTTAACTGTTAAGTTGCTGATTTT
AGAATGATTTGTTAAATTGTTGGCTGCCTTAGAATGATGGCTAGATTGTT
AAATTGTTAAATTGTTGATTTTAGAATAATTTGTTAAATTGTTGGCTGCT
CGATTAGAATGATGACTAAATGGTTGTTGCTAAATTGGTTAATTTAAATT
GTTGTTGCTATGTTTATTGAACAAGATATTTGACATATTTAGAATGATGG
TTGCCTGTTTGCTGATTTTGTTTCCTAAATTTATTTTCTAAATTGCTAAT
GTTGCTGATTTAGAATAAAGAAACATAAATAATGGATGCATGTTTTAGAA
TTCAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCT
GATTTTGTTACCTAAATTTGTTTTCTAAATTGCTAATTTTGCTGATTTAG
AATAAAGAAACATAAATAATGGATGCATGTTTTAGAATTCAACTCTTTAA
ATTTAGCTGCAAGTATCAGTTCTCAGTCTATTATTGATGATTTCAAGTTA
ATTATGCTTTTTATAACTTAATTTTTTGCTATATAATATTATTTGCTTTA
TACATATTGTAATTTTATGTCGGCCACCCCAGACTATTTAGTCAAGCTCC
GCCGAGTTTCACAAGATTTTCAAAACATGTCACGGTGGACCGCCTATCTA
ATTGGTCTTAGTGTAGTCGATGGCAGATGTCCAAAAATCCGCTATTGTGG
CCTATTGCGCCGCTATGATGGACATTCCTTCGCAAATGGCTTATGGCGGA
TTTCAAAATATCTGCCACGCCATAGTGGAAAGATGGCGCCATGACCGCCG
ATTAACAACACTAATTGGTCTATTGTAGAATTTGCCTAGCTTAATAATGA
ACTTCAATCTATTTTCTACTGACTAATAAATTTTATGAATTACAAAATTA
GTGCTTTTTTTTTGTTGCTTTTACTGATATCTTATTATTTTTCCTTTTGC
TTGATTGGCTGCGACTTCAGGTCACATCAAATCACAATCTTTTAGCAATC
AAGTTTGAGACAAGGTTTAAATTTTCTCTAAGTTTTGATAACCACAGTGT
TCCTTCTGCTCGCCTTTGCATTGTACCTAGAACCAAAAGCTTTGCTATAA
ATAATCTTTTACAGATTCTCTCCTGCTTTGGACAGGGGATTCTTACTGTA
GTTTTAAATATTTGACAGGGCATTTATGGAGTCGCATTTGCCAGCGTTTA
AGGAGTCGAATCCTCAGTTAGAAGTGGTTACTGAAATGATTCGTGGTCAA
CATCCACATCTAAAGGCTTTTTACAGTAAGATTCTTGAGCTCACTTGTAA
CTTTGTCTCTATGAGTTTTTTCGTAATTGTAATTTATGTCTCTCGTTGAA
AACAGAGAATCATAACGAGCGAGTTGTATGTGTGAGGAATATGGATGCGG
AAGAGGTACTTCTGCATGCAACCAGGCTAAGGAATGCACTTGGAAGGAAA
GTAATTAAACTGAGGACAAGACATGTAACCAAACATCCTAGTGTGCAAGG
TACATGGACAACTGCTTTGAAATATTAG
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Coding sequence (CDS) from alignment at Ca7:33615041..33618718+

>Ca_16179_v1.0_kabuli ID=Ca_16179_v1.0_kabuli; Name=Ca_16179; organism=Cicer arietinum; type=CDS; length=360bp; location=Sequence derived from: Ca7:33615041..33618718+ (Cicer arietinum
ATGGCTTTGCGAGGAGTTTGGCAACTTCAGAAGCTCATTGTTAGCTACAG
CGATTGGGGTGGAAGTAGCAGAGGTATAAGGGCATTTATGGAGTCGCATT
TGCCAGCGTTTAAGGAGTCGAATCCTCAGTTAGAAGTGGTTACTGAAATG
ATTCGTGGTCAACATCCACATCTAAAGGCTTTTTACAAGAATCATAACGA
GCGAGTTGTATGTGTGAGGAATATGGATGCGGAAGAGGTACTTCTGCATG
CAACCAGGCTAAGGAATGCACTTGGAAGGAAAGTAATTAAACTGAGGACA
AGACATGTAACCAAACATCCTAGTGTGCAAGGTACATGGACAACTGCTTT
GAAATATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: KEGG ORTHOLOGY
TermDefinition
K17424MRPL43; large subunit ribosomal protein L43, mitochondrial
Vocabulary: INTERPRO
TermDefinition
IPR007741Ribosomal_mL43/mS25/NADH_DH
IPR012336Thioredoxin-like_fold