Ca_07653.1, Ca_07653.1_ICC4958_v2 (mRNA) Cicer arietinum

Transcript Overview
NameCa_07653.1
Unique NameCa_07653.1_ICC4958_v2
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length5580
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca_LG_3supercontigCa_LG_3:38691844..38697423 -Cicer arietinum ICC 4958 genome v2n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum ICC 4958 genome v22015-08-11
InterProScan: C. arietinum ICC 4958, v2.0 (desi)2019-05-21
BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot2019-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
caipsR242Pisum sativum Cameor genome v1aPisum sativum
caipsR279Pisum sativum Cameor genome v1aPisum sativum
caipsR296Pisum sativum Cameor genome v1aPisum sativum
caipvR0292Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caipvR0301Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caivuR0313Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivuR0321Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caiccR0245Cajanus cajan Asha genome v1.0Cajanus cajan
caiccR0261Cajanus cajan Asha genome v1.0Cajanus cajan
ancaiL0509Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0744Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0786Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0970Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0976Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL1293Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiL243Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaiL342Vigna angularis Jingnong 6 genome v1.1Vigna angularis
caizwsR238Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caizwsR319Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caitifR249Vicia faba cv. Tiffany genome v1.0Vicia faba
caitifR267Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhR243Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caivfhR263Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caivrvR216Vigna radiata cv. VC1973A genome v6.0Vigna radiata
caivrvR286Vigna radiata cv. VC1973A genome v6.0Vigna radiata
caivssR0327Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivssR0375Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivuaR292Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caivuaR308Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caicanR0248Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanR0330Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_10106Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg30935.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr06.1183.1.6211316fVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan10g093700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Hedin2.R1.3g084520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.3g069800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
LR48_mrnaVigan09g156700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014663064.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg3173.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.006G096300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.007G183600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_041073Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_22629Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Tiffany.R1.5g143560.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_31726Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_022785208.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun06g106900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat03G0043000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat3g009120.1Pisum sativum Cameor genome v1aPisum sativum
Psat06G0400400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004494598.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004495706.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ca_07653Ca_07653_ICC4958_v2Cicer arietinumgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_07653.1.cds1Ca_07653.1.cds1_ICC4958_v2Cicer arietinumCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_07653.1.exon2Ca_07653.1.exon2_ICC4958_v2Cicer arietinumexon
Ca_07653.1.exon1Ca_07653.1.exon1_ICC4958_v2Cicer arietinumexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_07653.1.utr5p2Ca_07653.1.utr5p2_ICC4958_v2Cicer arietinumfive_prime_UTR
Ca_07653.1.utr5p1Ca_07653.1.utr5p1_ICC4958_v2Cicer arietinumfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_07653.1_ICC4958_v2Ca_07653.1_ICC4958_v2Cicer arietinumpolypeptide


Homology
BLAST of Ca_07653.1 vs. DB:Swiss
Match: YNF5_SCHPO (Uncharacterized J domain-containing protein C17A3.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pi041 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.157e-10
Identity = 49/175 (28.00%), Postives = 77/175 (44.00%), Query Frame = 1
Query:    1 MECNKDEALRAKQIAENRMQCGDFAGALKFAMKAQRLF--------------------------PEIQNITQILT--------------------VCEVHCAAQNKLSASDMDWYGILLTQRFTDEATIKKQYKKLALLLHPDKNKSAGAEAAFKLIVEANRVLSDQTKRSLYNK 387
            ME +++EALR   +A   +  G++  ALKFA K+ R+                           P+ +N +   +                      E H   Q  +   +  +Y IL  ++   +  IKK YKKLAL LHPDKN +  A+ AFK++ +A +VLSD   R+ Y++
Sbjct:    1 MESSREEALRCIGLARKYLNAGEYDKALKFANKSLRIHATTEGEDFVKQIEKQKLTGSPNPQATPKQENKSNFFSEKQSVRENGNSSAGEKKQKWTSEQHLLVQKIIKYKNHQYYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHYDR 175          
BLAST of Ca_07653.1 vs. DB:Swiss
Match: DJB12_BOVIN (DnaJ homolog subfamily B member 12 OS=Bos taurus OX=9913 GN=DNAJB12 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.333e-10
Identity = 56/172 (32.56%), Postives = 72/172 (41.86%), Query Frame = 1
Query:    1 MECNKDEALRAKQIAENRMQCGDFAGALKFAMKAQRLFPE------IQNI-------------TQILTVCEVHCAAQNKLSASD------------------------MDWYGILLTQRFTDEATIKKQYKKLALLLHPDKNKSAGAEAAFKLIVEANRVLSDQTKRSLYNK 387
            ME NKDEA R   IA   +Q      AL+F  KAQRL+P       I+++             T+         A  N  SA+                          D+Y IL   R   +  +KK Y+KLAL  HPDKN + GA  AFK I  A  VLS+  KR  Y++
Sbjct:    1 MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVHALIESLNQKPQPAGDQPQPTEATHTTHRKAAGANTASANGEAGGESTKGYTAEQVAAVKRVKQCKDYYEILGVSRGASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQ 172          
BLAST of Ca_07653.1 vs. DB:Swiss
Match: HLJ1_YEAST (Protein HLJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HLJ1 PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 7.725e-10
Identity = 48/151 (31.79%), Postives = 66/151 (43.71%), Query Frame = 1
Query:  169 AQNKLSASDMDWYGILLTQRFTDEATIKKQYKKLALLLHPDKNKSAGAEAAFKLIVEANRVLSDQTKRSLYNKKIRGPAVTTALKVPPHTQNSNQRDAQQTFWTSCKHCKTQYEYYKSIVNATLRCQQCSKPFTARDMGFQ--GAPPGNTP 615
            A   LS    ++Y IL   R   ++ IKK Y+KLA+ LHPDKN    A  AFK+I  A  VLS++ KRS+Y++  R           P  +    R A   F  S         +     N+    Q+   P    D  F   G+P G +P
Sbjct:   11 ALEILSKDKHEFYEILKVDRKATDSEIKKAYRKLAIKLHPDKNSHPKAGEAFKVINRAFEVLSNEEKRSIYDRIGR----------DPDDRQMPSRGAASGFRGSAGGSPMGGGFEDMFFNSRFGGQRAGPPEDIFDFLFNAGGSPFGASP 151          
BLAST of Ca_07653.1 vs. DB:Swiss
Match: DNAJ_HELPY (Chaperone protein DnaJ OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 2.847e-9
Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 1
Query:  193 DMDWYGILLTQRFTDEATIKKQYKKLALLLHPDKNKSAG---AEAAFKLIVEANRVLSDQTKRSLYNK 387
            ++ +Y IL  ++ +++ TIKK Y+KLAL  HPD+N  AG   AE  FKLI EA  VLSD+ KR+LY++
Sbjct:    2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRN--AGDKEAEEKFKLINEAYGVLSDEKKRALYDR 67          
BLAST of Ca_07653.1 vs. DB:Swiss
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster OX=7227 GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 63.929 bits (154), Expect = 2.868e-9
Identity = 33/62 (53.23%), Postives = 41/62 (66.13%), Query Frame = 1
Query:  199 DWYGILLTQRFTDEATIKKQYKKLALLLHPDKNKSAGAEAAFKLIVEANRVLSDQTKRSLYN 384
            D+Y IL  +R   +  IKK Y+KLAL  HPDKNKS  AE  FK I EA  VLSD+ KR +++
Sbjct:    4 DFYKILGLERKASDDEIKKAYRKLALKYHPDKNKSPQAEERFKEIAEAYEVLSDKKKRDIFD 65          
BLAST of Ca_07653.1 vs. DB:Swiss
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus OX=10090 GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 3.778e-9
Identity = 34/63 (53.97%), Postives = 40/63 (63.49%), Query Frame = 1
Query:  199 DWYGILLTQRFTDEATIKKQYKKLALLLHPDKNKSAGAEAAFKLIVEANRVLSDQTKRSLYNK 387
            D+Y IL      +E  IKK Y+K+AL  HPDKNK   AE  FK I EA  VLSD  KRSLY++
Sbjct:    4 DYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRSLYDQ 66          
BLAST of Ca_07653.1 vs. DB:Swiss
Match: DNAJ_METTE (Chaperone protein DnaJ OS=Methanosarcina thermophila OX=2210 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 4.652e-9
Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 1
Query:  187 ASDMDWYGILLTQRFTDEATIKKQYKKLALLLHPDKNKSAGAEAAFKLIVEANRVLSDQTKRSLYNK 387
            A+  D+Y IL   R      IKK Y+KLAL  HPD+NK  GAE  FK I EA  VLSD  KR+ Y++
Sbjct:    2 ATTRDYYEILGLSRDATPEDIKKSYRKLALKYHPDRNKEPGAEEKFKEISEAYAVLSDPEKRAQYDR 68          
BLAST of Ca_07653.1 vs. DB:Swiss
Match: DNAJ_METMZ (Chaperone protein DnaJ OS=Methanosarcina mazei OX=2209 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 6.012e-9
Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 1
Query:  187 ASDMDWYGILLTQRFTDEATIKKQYKKLALLLHPDKNKSAGAEAAFKLIVEANRVLSDQTKRSLYNK 387
            A+  D+Y IL   + +    IKK Y+KLAL  HPD+NK  GAE  FK I EA  VLSD  KR+ Y++
Sbjct:    2 ATKRDYYEILGLSKDSSVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVLSDAEKRAQYDR 68          
BLAST of Ca_07653.1 vs. DB:Swiss
Match: DNAJ_METMA (Chaperone protein DnaJ OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) OX=192952 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 6.012e-9
Identity = 33/67 (49.25%), Postives = 42/67 (62.69%), Query Frame = 1
Query:  187 ASDMDWYGILLTQRFTDEATIKKQYKKLALLLHPDKNKSAGAEAAFKLIVEANRVLSDQTKRSLYNK 387
            A+  D+Y IL   + +    IKK Y+KLAL  HPD+NK  GAE  FK I EA  VLSD  KR+ Y++
Sbjct:    2 ATKRDYYEILGLSKDSSVEDIKKTYRKLALQYHPDRNKEPGAEEKFKEISEAYAVLSDAEKRAQYDR 68          
BLAST of Ca_07653.1 vs. DB:Swiss
Match: DNAJ_HELHP (Chaperone protein DnaJ OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) OX=235279 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 9.013e-9
Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 1
Query:  196 MDWYGILLTQRFTDEATIKKQYKKLALLLHPDKN-KSAGAEAAFKLIVEANRVLSDQTKRSLYNK 387
             D+Y IL   R +D+ TIKK Y+K+AL  HPD+N     AE  FK + EA  VLSD +KR +Y+K
Sbjct:    4 FDYYEILEITRTSDKETIKKAYRKMALKYHPDRNPDDKDAEEQFKRVNEAYEVLSDDSKRQIYDK 68          
The following BLAST results are available for this feature:
BLAST of Ca_07653.1 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
YNF5_SCHPO1.157e-1028.00Uncharacterized J domain-containing protein C17A3.... [more]
DJB12_BOVIN5.333e-1032.56DnaJ homolog subfamily B member 12 OS=Bos taurus O... [more]
HLJ1_YEAST7.725e-1031.79Protein HLJ1 OS=Saccharomyces cerevisiae (strain A... [more]
DNAJ_HELPY2.847e-950.00Chaperone protein DnaJ OS=Helicobacter pylori (str... [more]
DNAJ1_DROME2.868e-953.23DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNJB5_MOUSE3.778e-953.97DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNAJ_METTE4.652e-950.75Chaperone protein DnaJ OS=Methanosarcina thermophi... [more]
DNAJ_METMZ6.012e-949.25Chaperone protein DnaJ OS=Methanosarcina mazei OX=... [more]
DNAJ_METMA6.012e-949.25Chaperone protein DnaJ OS=Methanosarcina mazei (st... [more]
DNAJ_HELHP9.013e-949.23Chaperone protein DnaJ OS=Helicobacter hepaticus (... [more]
back to top
InterPro
Analysis Name: InterProScan: C. arietinum ICC 4958, v2.0 (desi)
Date Performed: 2019-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001623DnaJ domainPRINTSPR00625JDOMAINcoord: 87..102
score: 51.75
coord: 69..87
score: 34.4
coord: 103..123
score: 46.95
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 66..123
e-value: 6.3E-18
score: 75.6
IPR001623DnaJ domainPFAMPF00226DnaJcoord: 67..128
e-value: 6.1E-17
score: 61.5
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 67..131
score: 14.789
IPR001623DnaJ domainCDDcd06257DnaJcoord: 67..120
e-value: 1.06086E-16
score: 72.9633
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110coord: 52..142
e-value: 7.7E-20
score: 72.8
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 61..130
IPR024593Domain of unknown function DUF3444PFAMPF11926DUF3444coord: 467..671
e-value: 4.7E-72
score: 242.1
coord: 880..1072
e-value: 2.8E-48
score: 164.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 768..784
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 752..766
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 827..853
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 737..814
NoneNo IPR availablePANTHERPTHR45089:SF20coord: 1..1090
NoneNo IPR availablePANTHERPTHR45089FAMILY NOT NAMEDcoord: 1..1090

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_07653.1_ICC4958_v2 ID=Ca_07653.1_ICC4958_v2; Name=Ca_07653.1; organism=Cicer arietinum; type=mRNA; length=5580bp
TTGATCCCTCCCTAATCCTATCTAGAAGATTCTAATTGTATGCAATGGGA
GAATGAGAAACCAAAATTTAGGGGAAACAGCAAAACCATCGTCCGTTCTT
AGTTTCATTTTTCGAGTTCCCGCTTTATGGGCTCTCTATGTCTCTAGCAC
ATTAATTAATTAATTGTAGGAGTGGCCAAAATAATAAAGAAGCAAATAAC
TCAAGTGGCAAAGTCTACAGAGAGGGACGATAATACAAGAATACATTCTC
AGACAGCCGCAGTGCAAGTAAGTTCCTTCATTTTTCCTTACTACTCAATG
CCTTCATTCTCGCGATATGTTTTCTTCTCAGATCTCCATTTTGTTTCCGA
TCTTTTCATTTTCATTTGAAATTAGGGTTTAGATCATGTTGCGTGCTTTC
TGACCTAACTTTCATGTCCATTCCTAAACTTCACGGTAATTATTATTATT
ATTTTTGTTAATTCATGAGCTCAAACCAACATTGACGACATTTTCTATAA
CCTTTCTGTTTGGTAAAGGAATTGTTTTTTCTAGAACCACTGGCTTGGCT
TATCATGCGCTTCGTTCAGGTTTTATTTTTATTTTTTATTTAGTATTTAT
ATTTATTGCATGTTTAGATCTACTTATGTGTTAAATGTGGATTTTAATTT
GTAGTATGAGGGCGTGTTTGGTTTGGTTTTTGGTAGAATTCTTACACGGA
CACAGTGAACTTGTTGTCAATTCATTGCGTTCATTGATTCACTGAGTTAC
ATTGAGATGGAGGATTATATAGTTGAGTCGGTTGCAACCGTAATGCCAAC
TGCCAATTGACTCTAACAAACTCATTCTAACCAAACTTTGGCCTTTTTGT
TATATATTTTTAGAAAAGTTATTTTGGTATTCTATAATTTAGAGATTATC
TTTTAGAGACTTTTAAGAACATGAGAAGCTGTTTTGTGTTTGTGTGTTGT
AGTGAAATTAACTTCTTTTTTTTTTTTAATGATTTTTTTTGAGAAGCTAC
AAACAGCTTCTCATTTTTAGATTATTTTTCAGTTTTTTAAAAAGCTATAA
CCAACAGATGCAAACTATCAAAACTGAATAGTTATATTTTTTTTAAAAGT
GATTATTTTACTAAATAAGTTGTAACAAACACACCCTCAAGCCTACTGGT
GCACAAGCTGCACGTACATAACTCATTGCATATATACAGTGATAGGTTTG
AGGAAATGCTTTCTGTTTTTATTTTTCTTTTATTTCAATTGTTTTCTCTT
TTCAAAGTTTTCTAAGTGAAAACAACTTTTTTTTTTGTTTTCACTATTTG
CTATACAATTTTATGAAAGCAATAAATAAATTGAAAACAAGGTGACAGGT
TTGTGCTTAAAAATGAAAAGAAAATTATTTTTGATACCAACAGGCCCTAA
CTGCATTCCCTATTTTATTTTGCATGTTTGGTAAAATTGTTGTTACCCGT
AGAAGCAGTTTGACCTAAAAGTGAAAAAATATAGCTTTTGCGTTCGGTTG
AGGATTTCATGCTAATAGTATGTGGGGGTGAGCATTTGCAGACTTGATTA
TTGACGATCTAGATTTTGTTAAATTCATTTTAGTGAGTTTTGAACTATTG
CAATTTATGTTTAGATACCTTTATATACAAAAAATGATTTTAGTATAAAA
TATGGAAGCTGAATGCAAAAGCATGGCATGCTCTTGCTTTCATGGGATTC
TATAACCAAACTTGATTTTAGAGTAAGATATCCAAACAACACAATGTTTA
CATGGAATCACATTTGTTGGTATTTGAATGGGACTTTGTCGAGCACAGAT
CAATGCAAACATGTAAGTGTGTTTGGTTTTGCAGCGACAGAAATTGATTT
TGAATTAATTTATTTTGTAAAATTGATTTTGGCTAAAATAGAGTTGAATG
TAAAATGATTGGTATTTGGATATATTAATGTAAAAGTGAATTGAACAATA
CATTTGATGCTAGAAATCAATTTAAGAGGCAAAAGCTCTAAATTCTAGCT
TCAAGTTAGAATTAATTCTAGAGGAAAAATCAATTCTATACCTCCATAAT
CAATTATACGAACTTACTTTTGAGATTACAGTTTCAGTTAATATTAATGT
TGCAATCACCCATTCAAACACTCATTGTGTTGTTTATTTATGATTTCCTT
GACAAATAAGTAATTGGGGGTTTGACTTGTGTCAATCAGGTGAAAATGTT
GCACTGTGTTGGGGTATCAAATTTGTGAAAAGGCAGAAGCTTCCCGTTTC
TGTGTTGTAAGATTCAGGGAACTACAATAATTGAGTTTTGATTTCAACTT
ACCCATGGAGTGCAACAAGGACGAAGCTCTGAGAGCTAAACAAATTGCTG
AAAATAGAATGCAATGTGGTGACTTTGCAGGGGCACTGAAGTTTGCCATG
AAAGCTCAAAGACTGTTTCCTGAGATCCAGAACATTACTCAAATCCTTAC
TGTTTGTGAGGTTCACTGTGCTGCACAGAACAAACTCTCCGCGTCTGATA
TGGACTGGTATGGAATTCTTCTGACCCAGAGATTTACTGATGAAGCAACT
ATAAAGAAACAGTATAAGAAGCTGGCACTGCTACTTCATCCCGATAAAAA
TAAATCTGCTGGGGCAGAGGCTGCTTTCAAGTTGATTGTGGAAGCTAACA
GAGTATTGAGCGACCAAACCAAGCGTTCTTTATATAACAAGAAGATTAGA
GGTCCTGCTGTAACTACAGCACTGAAGGTTCCACCCCATACTCAGAATTC
AAATCAGCGGGATGCGCAGCAGACATTTTGGACATCTTGCAAACATTGCA
AAACTCAGTACGAGTATTACAAATCCATTGTAAATGCTACCTTGCGTTGT
CAACAATGTTCTAAACCCTTTACAGCTCGTGACATGGGCTTCCAGGGTGC
ACCACCAGGAAATACACCGTCGTCATTTAATGATCGTAAAGGTCCTCAAA
ACCATGTGCCACCAAAAGAAGCATCGAAAAGTAACGGTGGAAAACCTCAT
GGTAAAGGACCGGAGGACAAATTTCCGCAGTCTTGTCCTGTATCTATGAC
AAAATGTACTGCTGGAGATGGAGTCTCTTGTAAAGTTCAAAAGAGTAAAG
ATGACCATGGGACTGCAGGAGTGACAAAGGCTGGTGCCGGAACTTCCAAC
CCTGCTACATCCAAAGCTAAGCAATCACAAACCCCGACAAATGTTGGAAG
TAAGAGAGCAAGGCAGTCAGCATCGGCAGATTTTAGAGATGATAACAAGG
CTGGAAATGGTAATGGCATGAAAGATAGCAATGTTCAAGAAAAGGGAGTT
GATCCTTTTGTCTCTGACGCAGGAGTCCACTCTAGGAGATCTTTCAGGAC
AAAGCAACATGTTTCATACACAGAAAATGCTGGAGGCACTGAGTTTGAGA
GTGCTTCCAAAAGGCCACGACAAGATGAATCATGTAAGGACATTAAAGTG
GAGAAAAGAGAAGTGTCTTCAAGTGGCGGGTTGTTCGATACCACAAGTCC
AGCTAGTTTCACAGCTGATGTGGCTGGTCAGAATGGAGAGATGAGAAATA
AAGCAAATGCCCAACCTGAAAAAACAGTTTTAAGGAATAAAATGAAAGTT
GAGCAATTGAATCTGCAGAGAAAGGAGACGTCCAAGTTGGATATTGATGA
TAGAAAGGCCAAAGCTGATGATTCTCTACTGAAATCGAATCCCACTCCCG
ATATTATTTGCTGTCCTGATCCAGAATTCAGTGATTTTGACAAGGTTAAG
AAAGAGGAATGTTTTGCTGATAATCAAGTCTGGGCTATTTATGGTTATGC
TGACTGTATGCCAAGATTCTATGCTCGCATCAGGAAGGTGCACTCCCCTT
TCAAGCTGGAGTATATTTGGCTGGAACCTAATCCAGATCTCAAAGATGAG
ATTGATTGGTGTGATGCAGATTTGCCTGTTGCCTGCGGTAAGTACAAACT
CGGCCATCGTCAGATAACTAAAGATGTTGGTATGTTTTCTCACCAGGTGC
GTTGCATTAAAAGTTCTAGAGGTTCGTATCTGGTATATCCCATGAAGGGA
GAAACTTGGGCAATTTTCAGACATTGGGATATAGGATGGAGTTCCAAACA
AGAAAAGAAATCAGAATTTGAATTTGAATATGTGAAAGTCTTGTCTGATT
TTGATGGGATTGATGGTGTTAAAGTTACTTATCTGAGTAAAGTGAAAGGG
TTTGTTAGTCTCTTTCAGCAAACAGTGCAGAATGGAATTGGCTTATTTTG
TGTTCCACCTAATGAAATGTATAAGTTTTCACATCAGGTTCCTTCAGTTA
AGATGACCGGTAAAGAAAGGGAAGGTGTTCCAAGAGGATCATTTGAACTT
GACCCTGCTGGCTTGCATAAGAGTGTTTTTCAAGTTAGTGATCCTGGTGA
TGGGAAGATGGAGGATGGAAACTTAAACAATGGGGTTACTTCTTGCCAGG
GATTCTCTGAGGGTAAAGTTGAACAGGCACTGTCTAATGAGAATATCCAC
AAAGCAAAGTTGCGAGAGAGTAATGGTCCTGAAATAGTTTCACCAATCAT
TAGAAGATCACCAAGGTCAAATGCAAAAAGTATGGACAATGGTCATGCAA
GCACTAGTGAATATTTGGTCAGAGACGATGATAAAAACACTAGCAGCAGG
GACCACGGTCAACCGGAGGGTAGTGAAGCTGCTGCATGCCAAACCAATGA
GAATTTCAAGACTCCACAGAAACACGAGAAGAGAAATTATCAAGGTGAGG
CGTTGACAGTTCGAAGGTCGCCTAGAGATTTAAGCAAGAAAAACGATATA
CAAGGTGCTGGTGAATGTACAACAGACAAGTTGACTGATGATCGTTCTAA
CACTAACAATAATATTAAGGAAAATGTGTTTTCTCAGTCGGTTGGAAGTG
ATCGTGCTTGTTTGAAAAAAGATTCCAGAGTTGTGGGATCTTGTTATGAC
TTTAAGAAGGAAAAATCTAGGGAAATGTTTCGGTGTGGTCAGGTATGGGC
AATATATGGCGATGGGGATAATATGCCTGATGTTTATGTTCAAATCAAGA
AAATTGAATCCACCTCTAATTTTAGATTGCACGTTTCCGAACTTGAACCC
TGCTCGCCACTAAAAGGTTTGAAGCGAACAATATCTTGTGGCTCCTTCAA
AATTAAAAATGCCAAACCCCATATTCTTTCTCTCTCTGCATTCTCTCATC
AACTAAATGTTGAACCCATGGAAAATAGTATATATGAAATTTACCCTAGA
AAAGGCGAGATTTGGGCACTATATCAGGACCAGAACTATGAACTTCCTTC
TTCAAATCAGGGCAGAGGCAGAGGTAAATGTCATTTAGTAGAAGTATTAG
CAGATAATGACAAGAATATCCAAGTTGTTATTCTGGTGCGTCTTAGTAAC
TCTCGGCCAATTTTCAAGGCTCCCATTATCCGTCGATCTAAGAACGGTAT
AATTGATGTATCAAGAGAAGAGGTTGGTAGATTTTCACATCAGGTTCCTG
CTTTTCAGCATAGTGGGGAAGACGATGTTCATCTCAGAGGTTGTTGGGTG
GTTGATTCTTCTTCAATGCCTTGTTTTTGA
back to top

protein sequence of Ca_07653.1_ICC4958_v2

>Ca_07653.1_ICC4958_v2 ID=Ca_07653.1_ICC4958_v2; Name=Ca_07653.1_ICC4958_v2; organism=Cicer arietinum; type=polypeptide; length=1091bp
MECNKDEALRAKQIAENRMQCGDFAGALKFAMKAQRLFPEIQNITQILTV
CEVHCAAQNKLSASDMDWYGILLTQRFTDEATIKKQYKKLALLLHPDKNK
SAGAEAAFKLIVEANRVLSDQTKRSLYNKKIRGPAVTTALKVPPHTQNSN
QRDAQQTFWTSCKHCKTQYEYYKSIVNATLRCQQCSKPFTARDMGFQGAP
PGNTPSSFNDRKGPQNHVPPKEASKSNGGKPHGKGPEDKFPQSCPVSMTK
CTAGDGVSCKVQKSKDDHGTAGVTKAGAGTSNPATSKAKQSQTPTNVGSK
RARQSASADFRDDNKAGNGNGMKDSNVQEKGVDPFVSDAGVHSRRSFRTK
QHVSYTENAGGTEFESASKRPRQDESCKDIKVEKREVSSSGGLFDTTSPA
SFTADVAGQNGEMRNKANAQPEKTVLRNKMKVEQLNLQRKETSKLDIDDR
KAKADDSLLKSNPTPDIICCPDPEFSDFDKVKKEECFADNQVWAIYGYAD
CMPRFYARIRKVHSPFKLEYIWLEPNPDLKDEIDWCDADLPVACGKYKLG
HRQITKDVGMFSHQVRCIKSSRGSYLVYPMKGETWAIFRHWDIGWSSKQE
KKSEFEFEYVKVLSDFDGIDGVKVTYLSKVKGFVSLFQQTVQNGIGLFCV
PPNEMYKFSHQVPSVKMTGKEREGVPRGSFELDPAGLHKSVFQVSDPGDG
KMEDGNLNNGVTSCQGFSEGKVEQALSNENIHKAKLRESNGPEIVSPIIR
RSPRSNAKSMDNGHASTSEYLVRDDDKNTSSRDHGQPEGSEAAACQTNEN
FKTPQKHEKRNYQGEALTVRRSPRDLSKKNDIQGAGECTTDKLTDDRSNT
NNNIKENVFSQSVGSDRACLKKDSRVVGSCYDFKKEKSREMFRCGQVWAI
YGDGDNMPDVYVQIKKIESTSNFRLHVSELEPCSPLKGLKRTISCGSFKI
KNAKPHILSLSAFSHQLNVEPMENSIYEIYPRKGEIWALYQDQNYELPSS
NQGRGRGKCHLVEVLADNDKNIQVVILVRLSNSRPIFKAPIIRRSKNGII
DVSREEVGRFSHQVPAFQHSGEDDVHLRGCWVVDSSSMPCF
back to top

mRNA from alignment at Ca_LG_3:38691844..38697423-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_07653.1_ICC4958_v2 ID=Ca_07653.1_ICC4958_v2; Name=Ca_07653.1; organism=Cicer arietinum; type=mRNA; length=5580bp; location=Sequence derived from: Ca_LG_3:38691844..38697423- (Cicer arietinum
TTGATCCCTCCCTAATCCTATCTAGAAGATTCTAATTGTATGCAATGGGA GAATGAGAAACCAAAATTTAGGGGAAACAGCAAAACCATCGTCCGTTCTT AGTTTCATTTTTCGAGTTCCCGCTTTATGGGCTCTCTATGTCTCTAGCAC ATTAATTAATTAATTGTAGGAGTGGCCAAAATAATAAAGAAGCAAATAAC TCAAGTGGCAAAGTCTACAGAGAGGGACGATAATACAAGAATACATTCTC AGACAGCCGCAGTGCAAGTAAGTTCCTTCATTTTTCCTTACTACTCAATG CCTTCATTCTCGCGATATGTTTTCTTCTCAGATCTCCATTTTGTTTCCGA TCTTTTCATTTTCATTTGAAATTAGGGTTTAGATCATGTTGCGTGCTTTC TGACCTAACTTTCATGTCCATTCCTAAACTTCACGGTAATTATTATTATT ATTTTTGTTAATTCATGAGCTCAAACCAACATTGACGACATTTTCTATAA CCTTTCTGTTTGGTAAAGGAATTGTTTTTTCTAGAACCACTGGCTTGGCT TATCATGCGCTTCGTTCAGGTTTTATTTTTATTTTTTATTTAGTATTTAT ATTTATTGCATGTTTAGATCTACTTATGTGTTAAATGTGGATTTTAATTT GTAGTATGAGGGCGTGTTTGGTTTGGTTTTTGGTAGAATTCTTACACGGA CACAGTGAACTTGTTGTCAATTCATTGCGTTCATTGATTCACTGAGTTAC ATTGAGATGGAGGATTATATAGTTGAGTCGGTTGCAACCGTAATGCCAAC TGCCAATTGACTCTAACAAACTCATTCTAACCAAACTTTGGCCTTTTTGT TATATATTTTTAGAAAAGTTATTTTGGTATTCTATAATTTAGAGATTATC TTTTAGAGACTTTTAAGAACATGAGAAGCTGTTTTGTGTTTGTGTGTTGT AGTGAAATTAACTTCTTTTTTTTTTTTAATGATTTTTTTTGAGAAGCTAC AAACAGCTTCTCATTTTTAGATTATTTTTCAGTTTTTTAAAAAGCTATAA CCAACAGATGCAAACTATCAAAACTGAATAGTTATATTTTTTTTAAAAGT GATTATTTTACTAAATAAGTTGTAACAAACACACCCTCAAGCCTACTGGT GCACAAGCTGCACGTACATAACTCATTGCATATATACAGTGATAGGTTTG AGGAAATGCTTTCTGTTTTTATTTTTCTTTTATTTCAATTGTTTTCTCTT TTCAAAGTTTTCTAAGTGAAAACAACTTTTTTTTTTGTTTTCACTATTTG CTATACAATTTTATGAAAGCAATAAATAAATTGAAAACAAGGTGACAGGT TTGTGCTTAAAAATGAAAAGAAAATTATTTTTGATACCAACAGGCCCTAA CTGCATTCCCTATTTTATTTTGCATGTTTGGTAAAATTGTTGTTACCCGT AGAAGCAGTTTGACCTAAAAGTGAAAAAATATAGCTTTTGCGTTCGGTTG AGGATTTCATGCTAATAGTATGTGGGGGTGAGCATTTGCAGACTTGATTA TTGACGATCTAGATTTTGTTAAATTCATTTTAGTGAGTTTTGAACTATTG CAATTTATGTTTAGATACCTTTATATACAAAAAATGATTTTAGTATAAAA TATGGAAGCTGAATGCAAAAGCATGGCATGCTCTTGCTTTCATGGGATTC TATAACCAAACTTGATTTTAGAGTAAGATATCCAAACAACACAATGTTTA CATGGAATCACATTTGTTGGTATTTGAATGGGACTTTGTCGAGCACAGAT CAATGCAAACATGTAAGTGTGTTTGGTTTTGCAGCGACAGAAATTGATTT TGAATTAATTTATTTTGTAAAATTGATTTTGGCTAAAATAGAGTTGAATG TAAAATGATTGGTATTTGGATATATTAATGTAAAAGTGAATTGAACAATA CATTTGATGCTAGAAATCAATTTAAGAGGCAAAAGCTCTAAATTCTAGCT TCAAGTTAGAATTAATTCTAGAGGAAAAATCAATTCTATACCTCCATAAT CAATTATACGAACTTACTTTTGAGATTACAGTTTCAGTTAATATTAATGT TGCAATCACCCATTCAAACACTCATTGTGTTGTTTATTTATGATTTCCTT GACAAATAAGTAATTGGGGGTTTGACTTGTGTCAATCAGGTGAAAATGTT GCACTGTGTTGGGGTATCAAATTTGTGAAAAGGCAGAAGCTTCCCGTTTC TGTGTTGTAAGATTCAGGGAACTACAATAATTGAGTTTTGATTTCAACTT ACCCATGGAGTGCAACAAGGACGAAGCTCTGAGAGCTAAACAAATTGCTG AAAATAGAATGCAATGTGGTGACTTTGCAGGGGCACTGAAGTTTGCCATG AAAGCTCAAAGACTGTTTCCTGAGATCCAGAACATTACTCAAATCCTTAC TGTTTGTGAGGTTCACTGTGCTGCACAGAACAAACTCTCCGCGTCTGATA TGGACTGGTATGGAATTCTTCTGACCCAGAGATTTACTGATGAAGCAACT ATAAAGAAACAGTATAAGAAGCTGGCACTGCTACTTCATCCCGATAAAAA TAAATCTGCTGGGGCAGAGGCTGCTTTCAAGTTGATTGTGGAAGCTAACA GAGTATTGAGCGACCAAACCAAGCGTTCTTTATATAACAAGAAGATTAGA GGTCCTGCTGTAACTACAGCACTGAAGGTTCCACCCCATACTCAGAATTC AAATCAGCGGGATGCGCAGCAGACATTTTGGACATCTTGCAAACATTGCA AAACTCAGTACGAGTATTACAAATCCATTGTAAATGCTACCTTGCGTTGT CAACAATGTTCTAAACCCTTTACAGCTCGTGACATGGGCTTCCAGGGTGC ACCACCAGGAAATACACCGTCGTCATTTAATGATCGTAAAGGTCCTCAAA ACCATGTGCCACCAAAAGAAGCATCGAAAAGTAACGGTGGAAAACCTCAT GGTAAAGGACCGGAGGACAAATTTCCGCAGTCTTGTCCTGTATCTATGAC AAAATGTACTGCTGGAGATGGAGTCTCTTGTAAAGTTCAAAAGAGTAAAG ATGACCATGGGACTGCAGGAGTGACAAAGGCTGGTGCCGGAACTTCCAAC CCTGCTACATCCAAAGCTAAGCAATCACAAACCCCGACAAATGTTGGAAG TAAGAGAGCAAGGCAGTCAGCATCGGCAGATTTTAGAGATGATAACAAGG CTGGAAATGGTAATGGCATGAAAGATAGCAATGTTCAAGAAAAGGGAGTT GATCCTTTTGTCTCTGACGCAGGAGTCCACTCTAGGAGATCTTTCAGGAC AAAGCAACATGTTTCATACACAGAAAATGCTGGAGGCACTGAGTTTGAGA GTGCTTCCAAAAGGCCACGACAAGATGAATCATGTAAGGACATTAAAGTG GAGAAAAGAGAAGTGTCTTCAAGTGGCGGGTTGTTCGATACCACAAGTCC AGCTAGTTTCACAGCTGATGTGGCTGGTCAGAATGGAGAGATGAGAAATA AAGCAAATGCCCAACCTGAAAAAACAGTTTTAAGGAATAAAATGAAAGTT GAGCAATTGAATCTGCAGAGAAAGGAGACGTCCAAGTTGGATATTGATGA TAGAAAGGCCAAAGCTGATGATTCTCTACTGAAATCGAATCCCACTCCCG ATATTATTTGCTGTCCTGATCCAGAATTCAGTGATTTTGACAAGGTTAAG AAAGAGGAATGTTTTGCTGATAATCAAGTCTGGGCTATTTATGGTTATGC TGACTGTATGCCAAGATTCTATGCTCGCATCAGGAAGGTGCACTCCCCTT TCAAGCTGGAGTATATTTGGCTGGAACCTAATCCAGATCTCAAAGATGAG ATTGATTGGTGTGATGCAGATTTGCCTGTTGCCTGCGGTAAGTACAAACT CGGCCATCGTCAGATAACTAAAGATGTTGGTATGTTTTCTCACCAGGTGC GTTGCATTAAAAGTTCTAGAGGTTCGTATCTGGTATATCCCATGAAGGGA GAAACTTGGGCAATTTTCAGACATTGGGATATAGGATGGAGTTCCAAACA AGAAAAGAAATCAGAATTTGAATTTGAATATGTGAAAGTCTTGTCTGATT TTGATGGGATTGATGGTGTTAAAGTTACTTATCTGAGTAAAGTGAAAGGG TTTGTTAGTCTCTTTCAGCAAACAGTGCAGAATGGAATTGGCTTATTTTG TGTTCCACCTAATGAAATGTATAAGTTTTCACATCAGGTTCCTTCAGTTA AGATGACCGGTAAAGAAAGGGAAGGTGTTCCAAGAGGATCATTTGAACTT GACCCTGCTGGCTTGCATAAGAGTGTTTTTCAAGTTAGTGATCCTGGTGA TGGGAAGATGGAGGATGGAAACTTAAACAATGGGGTTACTTCTTGCCAGG GATTCTCTGAGGGTAAAGTTGAACAGGCACTGTCTAATGAGAATATCCAC AAAGCAAAGTTGCGAGAGAGTAATGGTCCTGAAATAGTTTCACCAATCAT TAGAAGATCACCAAGGTCAAATGCAAAAAGTATGGACAATGGTCATGCAA GCACTAGTGAATATTTGGTCAGAGACGATGATAAAAACACTAGCAGCAGG GACCACGGTCAACCGGAGGGTAGTGAAGCTGCTGCATGCCAAACCAATGA GAATTTCAAGACTCCACAGAAACACGAGAAGAGAAATTATCAAGGTGAGG CGTTGACAGTTCGAAGGTCGCCTAGAGATTTAAGCAAGAAAAACGATATA CAAGGTGCTGGTGAATGTACAACAGACAAGTTGACTGATGATCGTTCTAA CACTAACAATAATATTAAGGAAAATGTGTTTTCTCAGTCGGTTGGAAGTG ATCGTGCTTGTTTGAAAAAAGATTCCAGAGTTGTGGGATCTTGTTATGAC TTTAAGAAGGAAAAATCTAGGGAAATGTTTCGGTGTGGTCAGGTATGGGC AATATATGGCGATGGGGATAATATGCCTGATGTTTATGTTCAAATCAAGA AAATTGAATCCACCTCTAATTTTAGATTGCACGTTTCCGAACTTGAACCC TGCTCGCCACTAAAAGGTTTGAAGCGAACAATATCTTGTGGCTCCTTCAA AATTAAAAATGCCAAACCCCATATTCTTTCTCTCTCTGCATTCTCTCATC AACTAAATGTTGAACCCATGGAAAATAGTATATATGAAATTTACCCTAGA AAAGGCGAGATTTGGGCACTATATCAGGACCAGAACTATGAACTTCCTTC TTCAAATCAGGGCAGAGGCAGAGGTAAATGTCATTTAGTAGAAGTATTAG CAGATAATGACAAGAATATCCAAGTTGTTATTCTGGTGCGTCTTAGTAAC TCTCGGCCAATTTTCAAGGCTCCCATTATCCGTCGATCTAAGAACGGTAT AATTGATGTATCAAGAGAAGAGGTTGGTAGATTTTCACATCAGGTTCCTG CTTTTCAGCATAGTGGGGAAGACGATGTTCATCTCAGAGGTTGTTGGGTG GTTGATTCTTCTTCAATGCCTTGTTTTTGA
back to top

Coding sequence (CDS) from alignment at Ca_LG_3:38691844..38697423-

>Ca_07653.1_ICC4958_v2 ID=Ca_07653.1_ICC4958_v2; Name=Ca_07653.1; organism=Cicer arietinum; type=CDS; length=3276bp; location=Sequence derived from: Ca_LG_3:38691844..38697423- (Cicer arietinum
ATGGAGTGCAACAAGGACGAAGCTCTGAGAGCTAAACAAATTGCTGAAAA
TAGAATGCAATGTGGTGACTTTGCAGGGGCACTGAAGTTTGCCATGAAAG
CTCAAAGACTGTTTCCTGAGATCCAGAACATTACTCAAATCCTTACTGTT
TGTGAGGTTCACTGTGCTGCACAGAACAAACTCTCCGCGTCTGATATGGA
CTGGTATGGAATTCTTCTGACCCAGAGATTTACTGATGAAGCAACTATAA
AGAAACAGTATAAGAAGCTGGCACTGCTACTTCATCCCGATAAAAATAAA
TCTGCTGGGGCAGAGGCTGCTTTCAAGTTGATTGTGGAAGCTAACAGAGT
ATTGAGCGACCAAACCAAGCGTTCTTTATATAACAAGAAGATTAGAGGTC
CTGCTGTAACTACAGCACTGAAGGTTCCACCCCATACTCAGAATTCAAAT
CAGCGGGATGCGCAGCAGACATTTTGGACATCTTGCAAACATTGCAAAAC
TCAGTACGAGTATTACAAATCCATTGTAAATGCTACCTTGCGTTGTCAAC
AATGTTCTAAACCCTTTACAGCTCGTGACATGGGCTTCCAGGGTGCACCA
CCAGGAAATACACCGTCGTCATTTAATGATCGTAAAGGTCCTCAAAACCA
TGTGCCACCAAAAGAAGCATCGAAAAGTAACGGTGGAAAACCTCATGGTA
AAGGACCGGAGGACAAATTTCCGCAGTCTTGTCCTGTATCTATGACAAAA
TGTACTGCTGGAGATGGAGTCTCTTGTAAAGTTCAAAAGAGTAAAGATGA
CCATGGGACTGCAGGAGTGACAAAGGCTGGTGCCGGAACTTCCAACCCTG
CTACATCCAAAGCTAAGCAATCACAAACCCCGACAAATGTTGGAAGTAAG
AGAGCAAGGCAGTCAGCATCGGCAGATTTTAGAGATGATAACAAGGCTGG
AAATGGTAATGGCATGAAAGATAGCAATGTTCAAGAAAAGGGAGTTGATC
CTTTTGTCTCTGACGCAGGAGTCCACTCTAGGAGATCTTTCAGGACAAAG
CAACATGTTTCATACACAGAAAATGCTGGAGGCACTGAGTTTGAGAGTGC
TTCCAAAAGGCCACGACAAGATGAATCATGTAAGGACATTAAAGTGGAGA
AAAGAGAAGTGTCTTCAAGTGGCGGGTTGTTCGATACCACAAGTCCAGCT
AGTTTCACAGCTGATGTGGCTGGTCAGAATGGAGAGATGAGAAATAAAGC
AAATGCCCAACCTGAAAAAACAGTTTTAAGGAATAAAATGAAAGTTGAGC
AATTGAATCTGCAGAGAAAGGAGACGTCCAAGTTGGATATTGATGATAGA
AAGGCCAAAGCTGATGATTCTCTACTGAAATCGAATCCCACTCCCGATAT
TATTTGCTGTCCTGATCCAGAATTCAGTGATTTTGACAAGGTTAAGAAAG
AGGAATGTTTTGCTGATAATCAAGTCTGGGCTATTTATGGTTATGCTGAC
TGTATGCCAAGATTCTATGCTCGCATCAGGAAGGTGCACTCCCCTTTCAA
GCTGGAGTATATTTGGCTGGAACCTAATCCAGATCTCAAAGATGAGATTG
ATTGGTGTGATGCAGATTTGCCTGTTGCCTGCGGTAAGTACAAACTCGGC
CATCGTCAGATAACTAAAGATGTTGGTATGTTTTCTCACCAGGTGCGTTG
CATTAAAAGTTCTAGAGGTTCGTATCTGGTATATCCCATGAAGGGAGAAA
CTTGGGCAATTTTCAGACATTGGGATATAGGATGGAGTTCCAAACAAGAA
AAGAAATCAGAATTTGAATTTGAATATGTGAAAGTCTTGTCTGATTTTGA
TGGGATTGATGGTGTTAAAGTTACTTATCTGAGTAAAGTGAAAGGGTTTG
TTAGTCTCTTTCAGCAAACAGTGCAGAATGGAATTGGCTTATTTTGTGTT
CCACCTAATGAAATGTATAAGTTTTCACATCAGGTTCCTTCAGTTAAGAT
GACCGGTAAAGAAAGGGAAGGTGTTCCAAGAGGATCATTTGAACTTGACC
CTGCTGGCTTGCATAAGAGTGTTTTTCAAGTTAGTGATCCTGGTGATGGG
AAGATGGAGGATGGAAACTTAAACAATGGGGTTACTTCTTGCCAGGGATT
CTCTGAGGGTAAAGTTGAACAGGCACTGTCTAATGAGAATATCCACAAAG
CAAAGTTGCGAGAGAGTAATGGTCCTGAAATAGTTTCACCAATCATTAGA
AGATCACCAAGGTCAAATGCAAAAAGTATGGACAATGGTCATGCAAGCAC
TAGTGAATATTTGGTCAGAGACGATGATAAAAACACTAGCAGCAGGGACC
ACGGTCAACCGGAGGGTAGTGAAGCTGCTGCATGCCAAACCAATGAGAAT
TTCAAGACTCCACAGAAACACGAGAAGAGAAATTATCAAGGTGAGGCGTT
GACAGTTCGAAGGTCGCCTAGAGATTTAAGCAAGAAAAACGATATACAAG
GTGCTGGTGAATGTACAACAGACAAGTTGACTGATGATCGTTCTAACACT
AACAATAATATTAAGGAAAATGTGTTTTCTCAGTCGGTTGGAAGTGATCG
TGCTTGTTTGAAAAAAGATTCCAGAGTTGTGGGATCTTGTTATGACTTTA
AGAAGGAAAAATCTAGGGAAATGTTTCGGTGTGGTCAGGTATGGGCAATA
TATGGCGATGGGGATAATATGCCTGATGTTTATGTTCAAATCAAGAAAAT
TGAATCCACCTCTAATTTTAGATTGCACGTTTCCGAACTTGAACCCTGCT
CGCCACTAAAAGGTTTGAAGCGAACAATATCTTGTGGCTCCTTCAAAATT
AAAAATGCCAAACCCCATATTCTTTCTCTCTCTGCATTCTCTCATCAACT
AAATGTTGAACCCATGGAAAATAGTATATATGAAATTTACCCTAGAAAAG
GCGAGATTTGGGCACTATATCAGGACCAGAACTATGAACTTCCTTCTTCA
AATCAGGGCAGAGGCAGAGGTAAATGTCATTTAGTAGAAGTATTAGCAGA
TAATGACAAGAATATCCAAGTTGTTATTCTGGTGCGTCTTAGTAACTCTC
GGCCAATTTTCAAGGCTCCCATTATCCGTCGATCTAAGAACGGTATAATT
GATGTATCAAGAGAAGAGGTTGGTAGATTTTCACATCAGGTTCCTGCTTT
TCAGCATAGTGGGGAAGACGATGTTCATCTCAGAGGTTGTTGGGTGGTTG
ATTCTTCTTCAATGCCTTGTTTTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR036869J_dom_sf
IPR024593DUF3444