Ca_07971.1, Ca_07971.1_ICC4958_v2 (mRNA) Cicer arietinum

Transcript Overview
NameCa_07971.1
Unique NameCa_07971.1_ICC4958_v2
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length996
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca_LG_3supercontigCa_LG_3:41674051..41675046 -Cicer arietinum ICC 4958 genome v2n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum ICC 4958 genome v22015-08-11
InterProScan: C. arietinum ICC 4958, v2.0 (desi)2019-05-21
BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot2019-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
caipsR223Pisum sativum Cameor genome v1aPisum sativum
caipsR266Pisum sativum Cameor genome v1aPisum sativum
caipsR270Pisum sativum Cameor genome v1aPisum sativum
caipsR301Pisum sativum Cameor genome v1aPisum sativum
caipvR0248Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caipvR0295Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caipvR0310Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caipvR0316Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caivuR0244Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivuR0316Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivuR0324Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caiccR0263Cajanus cajan Asha genome v1.0Cajanus cajan
caiccR0290Cajanus cajan Asha genome v1.0Cajanus cajan
caiccR0293Cajanus cajan Asha genome v1.0Cajanus cajan
ancaiL0513Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0519Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0748Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0750Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0975Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0979Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL1297Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caizwsR258Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caizwsR276Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caizwsR323Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caitifR255Vicia faba cv. Tiffany genome v1.0Vicia faba
caitifR289Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhR249Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caitifR302Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhR284Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caivfhR297Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caivrvR218Vigna radiata cv. VC1973A genome v6.0Vigna radiata
caivrvR237Vigna radiata cv. VC1973A genome v6.0Vigna radiata
caivrvR287Vigna radiata cv. VC1973A genome v6.0Vigna radiata
caivssR0342Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivssR0352Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivssR0382Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivuaR235Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caivuaR296Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caivuaR310Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caicanR0267Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanR0286Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanR0333Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
jg32077.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.001G179600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun01g162400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat03G0158500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-KK1_010144Cajanus cajan Asha genome v1.0Cajanus cajan
Psat3g042120.1Pisum sativum Cameor genome v1aPisum sativum
evm.model.Chr01.1554Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014640114.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004494009.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ca_07971Ca_07971_ICC4958_v2Cicer arietinumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_07971.1_ICC4958_v2Ca_07971.1_ICC4958_v2Cicer arietinumpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_07971.1.cds3Ca_07971.1.cds3_ICC4958_v2Cicer arietinumCDS
Ca_07971.1.cds2Ca_07971.1.cds2_ICC4958_v2Cicer arietinumCDS
Ca_07971.1.cds1Ca_07971.1.cds1_ICC4958_v2Cicer arietinumCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_07971.1.exon3Ca_07971.1.exon3_ICC4958_v2Cicer arietinumexon
Ca_07971.1.exon2Ca_07971.1.exon2_ICC4958_v2Cicer arietinumexon
Ca_07971.1.exon1Ca_07971.1.exon1_ICC4958_v2Cicer arietinumexon


Homology
BLAST of Ca_07971.1 vs. DB:Swiss
Match: TRL33_ORYSJ (Thioredoxin-like 3-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560200 PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 5.568e-68
Identity = 93/128 (72.66%), Postives = 105/128 (82.03%), Query Frame = 1
Query:   40 EDNNNSKKGLEGTGLILPINHHSNLKSASTDNDFTQILTHIKSSKTPAVINYGASWCRVCSQILPAFCSLSNKFPKLSFVYADIDECPETTQHIRYTPTFQFFRDGEKVDEMYGTGEERLHDRLWLHS 423
            E+    K GLEGTGL LP + H NL+SA +D    Q+L  +KSSK+PAVINYGASWCRVCSQILP FC  SN+F  L+F+YADIDECPETTQ+IRYTPTF F+RDGEKVDEM GTGEERLHDRLWLHS
Sbjct:    2 EEGEAKKTGLEGTGLSLPGSSHGNLRSAGSDQQLKQMLDSLKSSKSPAVINYGASWCRVCSQILPPFCRFSNEFKNLTFIYADIDECPETTQNIRYTPTFHFYRDGEKVDEMLGTGEERLHDRLWLHS 129          
BLAST of Ca_07971.1 vs. DB:Swiss
Match: TRL33_ARATH (Thioredoxin-like 3-3 OS=Arabidopsis thaliana OX=3702 GN=At3g53220 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.064e-59
Identity = 84/109 (77.06%), Postives = 91/109 (83.49%), Query Frame = 1
Query:   97 NHHSNLKSASTDNDFTQILTHIKSSKTPAVINYGASWCRVCSQILPAFCSLSNKFPKLSFVYADIDECPETTQHIRYTPTFQFFRDGEKVDEMYGTGEERLHDRLWLHS 423
            N + N+K A  D  F  IL  IKSSK+PAVINYGASWC VCSQILPAF  LSN F KL FVYADIDECPETT+HIRYTPTFQF+RDGEKVDEM+G GE+RLHDRLWLHS
Sbjct:   18 NDNGNVKIAPNDQSFLTILDDIKSSKSPAVINYGASWCGVCSQILPAFRKLSNSFSKLKFVYADIDECPETTRHIRYTPTFQFYRDGEKVDEMFGAGEQRLHDRLWLHS 126          
BLAST of Ca_07971.1 vs. DB:Swiss
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.795e-17
Identity = 39/135 (28.89%), Postives = 66/135 (48.89%), Query Frame = 1
Query:   13 MGIDMSGNGEDNNNSKKGLEGTGLILPINHHSNLKSASTDNDFTQILTHIKSSKTPAVINYGASWCRVCSQILPAFCSLSNKFPKLSFVYADIDECPE--TTQHIRYTPTFQFFRDGEKVDEMYGTGEERLHDRL 411
            MG+ ++    D ++ +  +E  G         N+   +T   + Q L+         + N+ A WC  C QI P +  LS  +P L F+  D+DE  +   +  I+ TPTF F RDG++VD++ G  +  LH ++
Sbjct:    1 MGLCLAKRNHDADDDEPHIELAG--------GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKI 127          
BLAST of Ca_07971.1 vs. DB:Swiss
Match: THIO_HORSE (Thioredoxin OS=Equus caballus OX=9796 GN=TXN PE=3 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.855e-15
Identity = 30/76 (39.47%), Postives = 46/76 (60.53%), Query Frame = 1
Query:  181 AVINYGASWCRVCSQILPAFCSLSNKFPKLSFVYADIDECPETTQ--HIRYTPTFQFFRDGEKVDEMYGTGEERLH 402
             V+++ A+WC  C  I P F SLS K+  + F+  D+D+C +      ++  PTFQFF+ G+KVDE  G  +E+L 
Sbjct:   23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVAAECEVKCMPTFQFFKKGQKVDEFSGANKEKLE 98          
BLAST of Ca_07971.1 vs. DB:Swiss
Match: TRXH5_ORYSJ (Thioredoxin H5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0480200 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.365e-15
Identity = 35/96 (36.46%), Postives = 53/96 (55.21%), Query Frame = 1
Query:  130 DNDFTQILTHIKSSKTPAVINYGASWCRVCSQILPAFCSLSNKFPKLSFVYADIDECPE-TTQH-IRYTPTFQFFRDGEKVDEMYGTGEERLHDRL 411
            DN   ++  H K+     V+ + A WC  C    P F  LS K+P + FV  D+DE PE  TQ+ +R TPTF F ++ E++D++ G   E L ++ 
Sbjct:   32 DNTMEEVAEHGKT----VVLKFSAIWCTPCRNAAPLFAELSLKYPDIVFVSVDVDEMPELVTQYDVRATPTFIFMKNNEEIDKLVGGNHEDLQEKF 123          
BLAST of Ca_07971.1 vs. DB:Swiss
Match: THIO_RABIT (Thioredoxin OS=Oryctolagus cuniculus OX=9986 GN=TXN PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.598e-14
Identity = 32/99 (32.32%), Postives = 54/99 (54.55%), Query Frame = 1
Query:  112 LKSASTDNDFTQILTHIKSSKTPAVINYGASWCRVCSQILPAFCSLSNKFPKLSFVYADIDECPETTQ--HIRYTPTFQFFRDGEKVDEMYGTGEERLH 402
            +K   + + F ++L    +     V+++ A+WC  C  I P F +LS KF  + F+  D+D+C +      ++  PTFQFF+ G+KV E  G  +E+L 
Sbjct:    2 VKQIESKSAFQEVLDS--AGDKLVVVDFSATWCGPCKMIKPFFHALSEKFNNVVFIEVDVDDCKDIAAECEVKCMPTFQFFKKGQKVGEFSGANKEKLE 98          
BLAST of Ca_07971.1 vs. DB:Swiss
Match: THIO_SHEEP (Thioredoxin OS=Ovis aries OX=9940 GN=TXN PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.511e-14
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1
Query:  181 AVINYGASWCRVCSQILPAFCSLSNKFPKLSFVYADIDECPETTQ--HIRYTPTFQFFRDGEKVDEMYGTGEERLH 402
             V+++ A+WC  C  I P F SLS K+  + F+  D+D+C +      ++  PTFQFF+ G+KV E  G  +E+L 
Sbjct:   23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVAAECEVKCMPTFQFFKKGQKVSEFSGANKEKLE 98          
BLAST of Ca_07971.1 vs. DB:Swiss
Match: THIO_MACMU (Thioredoxin OS=Macaca mulatta OX=9544 GN=TXN PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.919e-14
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1
Query:  181 AVINYGASWCRVCSQILPAFCSLSNKFPKLSFVYADIDECPETTQ--HIRYTPTFQFFRDGEKVDEMYGTGEERLH 402
             V+++ A+WC  C  I P F SLS K+  + F+  D+D+C +      ++  PTFQFF+ G+KV E  G  +E+L 
Sbjct:   23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLE 98          
BLAST of Ca_07971.1 vs. DB:Swiss
Match: THIO_CALJA (Thioredoxin OS=Callithrix jacchus OX=9483 GN=TXN PE=3 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 3.393e-14
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1
Query:  181 AVINYGASWCRVCSQILPAFCSLSNKFPKLSFVYADIDECPETTQ--HIRYTPTFQFFRDGEKVDEMYGTGEERLH 402
             V+++ A+WC  C  I P F SLS K+  + F+  D+D+C +      ++  PTFQFF+ G+KV E  G  +E+L 
Sbjct:   23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLE 98          
BLAST of Ca_07971.1 vs. DB:Swiss
Match: THIO_PIG (Thioredoxin OS=Sus scrofa OX=9823 GN=TXN PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 3.581e-14
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1
Query:  181 AVINYGASWCRVCSQILPAFCSLSNKFPKLSFVYADIDECPETTQ--HIRYTPTFQFFRDGEKVDEMYGTGEERLH 402
             V+++ A+WC  C  I P F SLS K+  + F+  D+D+C +      ++  PTFQFF+ G+KV E  G  +E+L 
Sbjct:   23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLE 98          
The following BLAST results are available for this feature:
BLAST of Ca_07971.1 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
TRL33_ORYSJ5.568e-6872.66Thioredoxin-like 3-3 OS=Oryza sativa subsp. japoni... [more]
TRL33_ARATH2.064e-5977.06Thioredoxin-like 3-3 OS=Arabidopsis thaliana OX=37... [more]
TRXH_POPJC5.795e-1728.89Thioredoxin H-type OS=Populus jackii OX=640484 PE=... [more]
THIO_HORSE1.855e-1539.47Thioredoxin OS=Equus caballus OX=9796 GN=TXN PE=3 ... [more]
TRXH5_ORYSJ5.365e-1536.46Thioredoxin H5 OS=Oryza sativa subsp. japonica OX=... [more]
THIO_RABIT1.598e-1432.32Thioredoxin OS=Oryctolagus cuniculus OX=9986 GN=TX... [more]
THIO_SHEEP2.511e-1438.16Thioredoxin OS=Ovis aries OX=9940 GN=TXN PE=3 SV=2[more]
THIO_MACMU2.919e-1438.16Thioredoxin OS=Macaca mulatta OX=9544 GN=TXN PE=3 ... [more]
THIO_CALJA3.393e-1438.16Thioredoxin OS=Callithrix jacchus OX=9483 GN=TXN P... [more]
THIO_PIG3.581e-1438.16Thioredoxin OS=Sus scrofa OX=9823 GN=TXN PE=1 SV=3[more]
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InterPro
Analysis Name: InterProScan: C. arietinum ICC 4958, v2.0 (desi)
Date Performed: 2019-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 32..138
e-value: 1.6E-21
score: 78.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR47571FAMILY NOT NAMEDcoord: 14..141
NoneNo IPR availableCDDcd02947TRX_familycoord: 49..127
e-value: 2.38538E-24
score: 87.6136
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 43..133
e-value: 1.6E-14
score: 53.8
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 35..134

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_07971.1_ICC4958_v2 ID=Ca_07971.1_ICC4958_v2; Name=Ca_07971.1; organism=Cicer arietinum; type=mRNA; length=996bp
ATGGAAGGAAGAATGGGAATCGATATGAGTGGCAACGGAGAAGATAATAA
TAATTCAAAGAAAGGGTTGGAAGGAACTGGCTTAATTTTACCCATCAACC
ATCATTCTAATTTGAAAAGCGCTTCCACAGATAACGACTTCACTCAAATC
CTCACACACATCAAATCCTCCAAAACTCCCGTAAGCAACACATTCTCTTT
AATTTTCCAACTACGTCTTTTCTTTTATTTCCTAACTTTTTGCTTCACTC
TTCACAATAACAAAAACCTGTATGCGATTTTCTTGTAGATGATTTGTTTT
TGATTCCTCTGTTACCAAATTGTTTGCAGGCTGTTATCAATTATGGCGCT
TCATGGTATGTTACTCCTCTCTCTCATGTGTCTACAAATTATTGAACTAC
TTTGAACACCAGGTGTTCGATGTTAACTCTTAGAGAATATGTGACTCCTC
TGAAATTTCTGAACTGAACCGTATAGTTTCTGGATGAAATTTTGATACAT
GATGTTTTTGAAATTCAGTTTATTTGGATTTGGACGAATTGAATTGAACA
TCATATATAACATTAATATATTGGTTCAGAAACTCAATTAAGCTGACATA
GGATAATATGTAGTTATTCGTCCCAGTTAAATTAGCATCGCATTGTTGTC
TTCCATTTCCTGCATCGAAGATAGTTGAAACTTGTCAATTATTTGGTTGT
AACGTGTTAATTTTAATAAATTTTGAAGACAAATTGTTGACAGTGTCAAA
TGATGTTTTTTTCTTGTATTTTTCAGGTGTCGTGTTTGCAGCCAAATTCT
CCCTGCATTCTGTAGTCTGAGCAACAAATTCCCAAAGCTTTCCTTTGTAT
ATGCAGATATTGATGAATGTCCGGAAACAACTCAGCACATTCGATACACT
CCGACCTTTCAGTTTTTTCGAGACGGTGAAAAGGTAGATGAGATGTATGG
TACCGGAGAAGAGAGGCTGCATGATCGACTGTGGTTGCACTCCTAA
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protein sequence of Ca_07971.1_ICC4958_v2

>Ca_07971.1_ICC4958_v2 ID=Ca_07971.1_ICC4958_v2; Name=Ca_07971.1_ICC4958_v2; organism=Cicer arietinum; type=polypeptide; length=141bp
MEGRMGIDMSGNGEDNNNSKKGLEGTGLILPINHHSNLKSASTDNDFTQI
LTHIKSSKTPAVINYGASWCRVCSQILPAFCSLSNKFPKLSFVYADIDEC
PETTQHIRYTPTFQFFRDGEKVDEMYGTGEERLHDRLWLHS
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mRNA from alignment at Ca_LG_3:41674051..41675046-

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_07971.1_ICC4958_v2 ID=Ca_07971.1_ICC4958_v2; Name=Ca_07971.1; organism=Cicer arietinum; type=mRNA; length=996bp; location=Sequence derived from: Ca_LG_3:41674051..41675046- (Cicer arietinum
ATGGAAGGAAGAATGGGAATCGATATGAGTGGCAACGGAGAAGATAATAA TAATTCAAAGAAAGGGTTGGAAGGAACTGGCTTAATTTTACCCATCAACC ATCATTCTAATTTGAAAAGCGCTTCCACAGATAACGACTTCACTCAAATC CTCACACACATCAAATCCTCCAAAACTCCCGTAAGCAACACATTCTCTTT AATTTTCCAACTACGTCTTTTCTTTTATTTCCTAACTTTTTGCTTCACTC TTCACAATAACAAAAACCTGTATGCGATTTTCTTGTAGATGATTTGTTTT TGATTCCTCTGTTACCAAATTGTTTGCAGGCTGTTATCAATTATGGCGCT TCATGGTATGTTACTCCTCTCTCTCATGTGTCTACAAATTATTGAACTAC TTTGAACACCAGGTGTTCGATGTTAACTCTTAGAGAATATGTGACTCCTC TGAAATTTCTGAACTGAACCGTATAGTTTCTGGATGAAATTTTGATACAT GATGTTTTTGAAATTCAGTTTATTTGGATTTGGACGAATTGAATTGAACA TCATATATAACATTAATATATTGGTTCAGAAACTCAATTAAGCTGACATA GGATAATATGTAGTTATTCGTCCCAGTTAAATTAGCATCGCATTGTTGTC TTCCATTTCCTGCATCGAAGATAGTTGAAACTTGTCAATTATTTGGTTGT AACGTGTTAATTTTAATAAATTTTGAAGACAAATTGTTGACAGTGTCAAA TGATGTTTTTTTCTTGTATTTTTCAGGTGTCGTGTTTGCAGCCAAATTCT CCCTGCATTCTGTAGTCTGAGCAACAAATTCCCAAAGCTTTCCTTTGTAT ATGCAGATATTGATGAATGTCCGGAAACAACTCAGCACATTCGATACACT CCGACCTTTCAGTTTTTTCGAGACGGTGAAAAGGTAGATGAGATGTATGG TACCGGAGAAGAGAGGCTGCATGATCGACTGTGGTTGCACTCCTAA
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Coding sequence (CDS) from alignment at Ca_LG_3:41674051..41675046-

>Ca_07971.1_ICC4958_v2 ID=Ca_07971.1_ICC4958_v2; Name=Ca_07971.1; organism=Cicer arietinum; type=CDS; length=426bp; location=Sequence derived from: Ca_LG_3:41674051..41675046- (Cicer arietinum
ATGGAAGGAAGAATGGGAATCGATATGAGTGGCAACGGAGAAGATAATAA
TAATTCAAAGAAAGGGTTGGAAGGAACTGGCTTAATTTTACCCATCAACC
ATCATTCTAATTTGAAAAGCGCTTCCACAGATAACGACTTCACTCAAATC
CTCACACACATCAAATCCTCCAAAACTCCCGCTGTTATCAATTATGGCGC
TTCATGGTGTCGTGTTTGCAGCCAAATTCTCCCTGCATTCTGTAGTCTGA
GCAACAAATTCCCAAAGCTTTCCTTTGTATATGCAGATATTGATGAATGT
CCGGAAACAACTCAGCACATTCGATACACTCCGACCTTTCAGTTTTTTCG
AGACGGTGAAAAGGTAGATGAGATGTATGGTACCGGAGAAGAGAGGCTGC
ATGATCGACTGTGGTTGCACTCCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis