Ca_07973.1, Ca_07973.1_ICC4958_v2 (mRNA) Cicer arietinum

Transcript Overview
NameCa_07973.1
Unique NameCa_07973.1_ICC4958_v2
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length2012
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca_LG_3supercontigCa_LG_3:41703594..41705605 +Cicer arietinum ICC 4958 genome v2n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum ICC 4958 genome v22015-08-11
InterProScan: C. arietinum ICC 4958, v2.0 (desi)2019-05-21
BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot2019-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
caipsR223Pisum sativum Cameor genome v1aPisum sativum
caipsR266Pisum sativum Cameor genome v1aPisum sativum
caipsR270Pisum sativum Cameor genome v1aPisum sativum
caipsR301Pisum sativum Cameor genome v1aPisum sativum
caipvR0248Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caipvR0295Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caipvR0310Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caipvR0316Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caivuR0244Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivuR0316Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivuR0324Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caiccR0263Cajanus cajan Asha genome v1.0Cajanus cajan
caiccR0290Cajanus cajan Asha genome v1.0Cajanus cajan
caiccR0293Cajanus cajan Asha genome v1.0Cajanus cajan
ancaiL0513Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0519Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0748Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0750Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0975Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0979Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL1297Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiL248Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaiL436Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaiL560Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaiL573Vigna angularis Jingnong 6 genome v1.1Vigna angularis
caizwsR258Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caizwsR276Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caizwsR323Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caitifR255Vicia faba cv. Tiffany genome v1.0Vicia faba
caitifR289Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhR249Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caitifR302Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhR284Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caivfhR297Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caivrvR218Vigna radiata cv. VC1973A genome v6.0Vigna radiata
caivrvR237Vigna radiata cv. VC1973A genome v6.0Vigna radiata
caivrvR287Vigna radiata cv. VC1973A genome v6.0Vigna radiata
caivssR0342Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivssR0352Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivssR0382Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivuaR235Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caivuaR296Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caivuaR310Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caicanR0267Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanR0286Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanR0333Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.001G179900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.007G148500.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014639349.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.5g113640.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.5g140680.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-KK1_010148Cajanus cajan Asha genome v1.0Cajanus cajan
jg32067.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat03G0157700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun01g162800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr01.1558Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Psat3g041760.1Pisum sativum Cameor genome v1aPisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004494013.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ca_07973Ca_07973_ICC4958_v2Cicer arietinumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_07973.1_ICC4958_v2Ca_07973.1_ICC4958_v2Cicer arietinumpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_07973.1.exon1Ca_07973.1.exon1_ICC4958_v2Cicer arietinumexon
Ca_07973.1.exon2Ca_07973.1.exon2_ICC4958_v2Cicer arietinumexon
Ca_07973.1.exon3Ca_07973.1.exon3_ICC4958_v2Cicer arietinumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_07973.1.cds1Ca_07973.1.cds1_ICC4958_v2Cicer arietinumCDS
Ca_07973.1.cds2Ca_07973.1.cds2_ICC4958_v2Cicer arietinumCDS
Ca_07973.1.cds3Ca_07973.1.cds3_ICC4958_v2Cicer arietinumCDS


Homology
BLAST of Ca_07973.1 vs. DB:Swiss
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana OX=3702 GN=XTH32 PE=2 SV=1)

HSP 1 Score: 480.33 bits (1235), Expect = 5.095e-172
Identity = 222/262 (84.73%), Postives = 244/262 (93.13%), Query Frame = 1
Query:   58 KFNSINFYKGFTNLWGPQHQRIDQNALTIWLDRTSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIVGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYPRKSDATFPIRPMWLYGSIWDASSWATEDGKYKADYKYQPFVARYTNFKASGCTAFAPLWCHPVSASPYGSGGLTSQQYRAMRWVQRYQLAYNYCQDPKRDHRLTPECW 843
            K  S+NFYKGF NLWGPQHQR+DQNALTIWLDRTSGSGFKSV+PFRSGYFGA+IKLQPGYTAGVIT+ YLSNNEAHPG+HDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKI+GREMKF LWFDPTKDFHHYAILWSP+EIIFLVDD+PIRRYP+KS +TFP+RPMWLYGSIWDASSWATEDGKYKADYKYQPF A+YTNFKA GCTA++   C+P+SASPY SGGLT QQ++AMRWVQ + + YNYC+D KRDH LTPECW
Sbjct:   37 KVGSLNFYKGFRNLWGPQHQRMDQNALTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYPKKSASTFPLRPMWLYGSIWDASSWATEDGKYKADYKYQPFTAKYTNFKALGCTAYSSARCYPLSASPYRSGGLTRQQHQAMRWVQTHSMVYNYCKDYKRDHSLTPECW 298          
BLAST of Ca_07973.1 vs. DB:Swiss
Match: XTH31_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana OX=3702 GN=XTH31 PE=1 SV=2)

HSP 1 Score: 371.318 bits (952), Expect = 4.736e-129
Identity = 174/255 (68.24%), Postives = 209/255 (81.96%), Query Frame = 1
Query:   76 FYKGFTNLWGPQHQRIDQNALTIWLDRTSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIVGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYPRKSDATFPIRPMWLYGSIWDASSWATEDGKYKADYKYQPFVARYTNFKASGCTAFAPLWCHPVSASPYGSGGLTSQQYRAMRWVQRYQLAYNYCQDPKRDHRLTPEC 840
            F + F  LWG QHQR +Q+ +T+WLD+++GSGFKS+RP+RSGYFGASIKLQPG+TAGV T+ YLSNN+ HPG HDEVDIEFLGTT GKPY+LQTNV++RGSGD  ++GREMKF LWFDPT+DFHHYAILW+P +I+F VDDVPIR Y RK++A FP RPMW+YGSIWDAS WATE+G+ KADY+YQPFVA+Y NFK +GCTA +   C P S +P  + GL+ QQ  A+ W QR  L YNYC DPKRDH  TPEC
Sbjct:   39 FDREFRTLWGSQHQRREQDVVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKNEAIFPTRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKNFKLAGCTADSSSSCRPPSPAPMRNRGLSRQQMAALTWAQRNFLVYNYCHDPKRDHTQTPEC 293          
BLAST of Ca_07973.1 vs. DB:Swiss
Match: XTH15_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana OX=3702 GN=XTH15 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.620e-66
Identity = 118/268 (44.03%), Postives = 154/268 (57.46%), Query Frame = 1
Query:   73 NFYKGFTNLWGPQHQRI--DQNALTIWLDRTSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIVGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYPRKSDATFPI---RPMWLYGSIWDASSWATEDGKYKADYKYQPFVARYTNFKASGCTAFAPLWCHPVSASPYGSGG------LTSQQYRAMRWVQRYQLAYNYCQDPKRDHR-LTPEC 840
            NF+  F   WG    +I    N L++ LD+ SGSGFKS + +  G     +KL  G +AG +TA+YLS+  A    HDE+D EFLG   GKPY L TNV+ +G GD     RE +F+LWFDPTK+FH Y+I+W P+ IIFLVD++PIR +        P    +PM +Y S+W+A  WAT  G  K D+   PF A Y  F A+ CTA +   C P   S +G G       L +   R +RWVQ+Y + YNYC D KR  R   PEC
Sbjct:   27 NFFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGAT---HDEIDFEFLGNETGKPYVLHTNVFAQGKGD-----REQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTASSG--CDPKFKSSFGDGKLQVATELNAYGRRRLRWVQKYFMIYNYCSDLKRFPRGFPPEC 284          
BLAST of Ca_07973.1 vs. DB:Swiss
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana OX=3702 GN=XTH30 PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 4.264e-66
Identity = 117/272 (43.01%), Postives = 162/272 (59.56%), Query Frame = 1
Query:   61 FNSINFYKGFTNLWGPQH--QRIDQNALTIWLDRTSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIVGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYPRKS--DATFPIRPMWLYGSIWDASSWATEDGKYKADYKYQPFVARYTNFKASGCTA----FAPLWCHP----VSASPYGSGGLTSQQYRAMRWVQRYQLAYNYCQDPKRDHRLTPEC 840
             N+++F +  + L+G  +  +  D  ++ + LDR +GSGF S   ++ G++ + IKL   YTAGV+ AFY SN +     HDE+DIEFLG   GKP+  QTN+Y  GS      GRE ++ LWFDP+K+FH Y+ILW+P +IIF VDDVPIR   R     A +P +PM LY +IWDAS WAT  GKYKA+YK+ PFVA + +F   GC+       P+ C      + +  Y S  + S Q  AMR  ++  + Y+YC D  R     PEC
Sbjct:   27 LNTLSFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHR---GREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPAKPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKSFSLDGCSVDPIQEVPMDCSDSVDFLESQDYSS--INSHQRAAMRRFRQRFMYYSYCYDTLRYPEPLPEC 293          
BLAST of Ca_07973.1 vs. DB:Swiss
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum OX=4097 GN=XTH PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.252e-63
Identity = 113/268 (42.16%), Postives = 150/268 (55.97%), Query Frame = 1
Query:   70 INFYKGFTNLWGPQHQRIDQNALTI--WLDRTSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIVGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYPRKSD--ATFPI-RPMWLYGSIWDASSWATEDGKYKADYKYQPFVARYTNFKASGCTAFAPLWCHPVSASPY------GSGGLTSQQYRAMRWVQRYQLAYNYCQDPKRDHRLTPEC 840
            + F+K +   W   H +      T+   LDR+SG+GF+S + +  G+F   +KL  G +AGV+TAFYLS+N A    HDE+D EFLG   G+PY LQTNV+  G GD     RE + +LWFDPTK +H Y++LW+  +I+  VDDVPIR +    D    FP  +PM +Y S+WDA  WAT  G  K D+   PF A YT+F   GC A  P      +              L + QYR +RWV++    YNYC D KR   L PEC
Sbjct:   30 VPFWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAE---HDEIDFEFLGNRTGQPYILQTNVFTGGKGD-----REQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRWVRQKYTIYNYCTDRKRYPTLPPEC 289          
BLAST of Ca_07973.1 vs. DB:Swiss
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana OX=3702 GN=XTH33 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 1.328e-63
Identity = 105/278 (37.77%), Postives = 156/278 (56.12%), Query Frame = 1
Query:   58 KFNSINFYKGFTNLWGPQHQRIDQNALTIWLDRTSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIVGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYPRKSDAT--FPIRPMWLYGSIWDASSWATEDGKYKADYKYQPFVARYTNFKASGC-------TAFAPLW--------CHPVSASPYGSGGLTSQQYRAMRWVQRYQLAYNYCQDPKRDHRLTPEC 840
            +F+ I    GF+  +G  + +++ +   + LD++SG+G  S   +  G+F A +KL  G+ +GV+ AFYLSN E +P  HDE+DIE LG +    +T+QTNVY  GS      GRE KF+ WFDPT+ FH Y ++W+    +FLVD++P+R++P +   T  +P +PM LY ++WD S WAT+ GKY  +YKY PFV    + + SGC       T   P            PV    + +  L+  Q  AM W +R  + Y+YC D  R   +  EC
Sbjct:   37 QFSKIAIENGFSRRFGAHNIQVNGSLAKLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTR---TGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYPSKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVVSVADVELSGCSVNNGSSTGSGPCTKSGGSISSLDPVDGQDFAT--LSKNQINAMDWARRKLMFYSYCSDKPRYKVMPAEC 309          
BLAST of Ca_07973.1 vs. DB:Swiss
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana OX=3702 GN=XTH28 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.669e-63
Identity = 110/269 (40.89%), Postives = 156/269 (57.99%), Query Frame = 1
Query:   58 KFNSINFYKGFTNLWGPQHQRI--DQNALTIWLDRTSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIVGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYPRKSD--ATFPIRPMWLYGSIWDASSWATEDGKYKADYKYQPFVARYTNFKASGC----TAFAPLWCHPVSASPYGSGGLTSQQYRAMRWVQRYQLAYNYCQDPKRDHRLTPEC 840
            K   I F +G+T L+G Q+  +  D  ++ + LD  +GSGF S   +  G+F +SIKL   Y+AGV+ AFYLSN + +   HDE+D EFLG   G+ + +QTN+Y  GS     +GRE +++LWFDPT+DFH Y+ILWS   IIF VD+VPIR   R +     FP +PM LY +IWD S WAT+ GKY  +YKY P+V+++T+    GC    T   P        +   +  +T  Q   M   ++  + Y+YC D  R   +  EC
Sbjct:   25 KLPLIQFDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTH---LGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPAKPMSLYSTIWDGSKWATDGGKYGVNYKYAPYVSQFTDLILHGCAVDPTEKFPSCKDEAVQNLRLASEITESQRNKMEIFRQKHMTYSYCYDHMRYKVVLSEC 290          
BLAST of Ca_07973.1 vs. DB:Swiss
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana OX=3702 GN=XTH27 PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 3.102e-61
Identity = 108/265 (40.75%), Postives = 154/265 (58.11%), Query Frame = 1
Query:   73 NFYKGFTNLWGPQHQRIDQN--ALTIWLDRTSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIVGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYPRKSD--ATFPIRPMWLYGSIWDASSWATEDGKYKADYKYQPFVARYTNFKASGCTAFAPLWCHP-----VSASPYGSGGLTSQQYRAMRWVQRYQLAYNYCQDPKRDHRLTPEC 840
            +F + +T L+G ++  + Q+  ++ + LD  +GSGF S   +  G+F ASIKL   YTAGV+ AFY+SN + +   HDE+D EFLG    K + +QTN+Y  GS      GRE +++LWFDPT+DFH Y+ILWS   IIF VD+VPIR   R ++    FP +PM LY +IWD S WAT  GKY  +YKY P++AR+++    GC    P+   P      +     +  +T  Q   M   +R  + Y+YC D  R +    EC
Sbjct:   30 SFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHS---GREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFPSKPMSLYTTIWDGSKWATNGGKYGVNYKYAPYIARFSDLVLHGCPV-DPIEQFPRCDEGAAEDMRAAQEITPSQRSKMDVFRRRLMTYSYCYDRARYNVALSEC 290          
BLAST of Ca_07973.1 vs. DB:Swiss
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana OX=3702 GN=XTH16 PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 5.634e-61
Identity = 111/271 (40.96%), Postives = 152/271 (56.09%), Query Frame = 1
Query:   67 SINFYKGFTNLWGPQHQRI--DQNALTIWLDRTSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIVGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYPRKSDATFPI---RPMWLYGSIWDASSWATEDGKYKADYKYQPFVARYTNFKASGCTAFA-PLWCHPVSASPYGSG------GLTSQQYRAMRWVQRYQLAYNYCQDPKR-DHRLTPEC 840
            S +F + F   WG    +I      L++ LDR SGSGFKS + +  G     +KL  G +AG +TA+YLS+       HDE+D EFLG   GKPY L TNV+ +G G+     RE +F+LWFDPTK+FH Y+++W P+ IIF+VD+VPIR +        P    +PM +Y S+W+A  WAT  G  K D+   PF A Y  F A+ CT  +   +C P   S + +G       L +   R +RWVQ+Y + Y+YC D KR      PEC
Sbjct:   24 SGSFNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPT---HDEIDFEFLGNETGKPYVLHTNVFAQGKGN-----REQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTVSSGSSFCDPKFKSSFTNGESQVANELNAYGRRRLRWVQKYFMIYDYCSDLKRFPQGFPPEC 286          
BLAST of Ca_07973.1 vs. DB:Swiss
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum OX=4081 GN=XTH1 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 7.977e-60
Identity = 108/268 (40.30%), Postives = 147/268 (54.85%), Query Frame = 1
Query:   70 INFYKGFTNLWGPQHQRIDQNALT--IWLDRTSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGYHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIVGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYPRKSD--ATFPI-RPMWLYGSIWDASSWATEDGKYKADYKYQPFVARYTNFKASGCTAFAPLWCHPVSASPY------GSGGLTSQQYRAMRWVQRYQLAYNYCQDPKRDHRLTPEC 840
            + F+K +   W   H +      T  + LDR+SG+GF+S + +  G+F   ++L  G +AGV+TAFYLS+N A    HDE+D EFLG   G+PY LQTNV+  G G+     RE + +LWFDPTK +H Y++LW+   I+  VDDVPIR +    D    FP  +PM +Y S+WDA  WAT  G  K ++   PF A YT+F   GC A  P      +              L + QYR +RWV++    YNYC D  R     PEC
Sbjct:   31 VPFWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAE---HDEIDFEFLGNRTGQPYILQTNVFTGGKGN-----REQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDGCEAATPQEVQVCNTKGMKWWDQKAFQDLDALQYRRLRWVRQKYTVYNYCTDKARYPVPPPEC 290          
The following BLAST results are available for this feature:
BLAST of Ca_07973.1 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
XTH32_ARATH5.095e-17284.73Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH4.736e-12968.24Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH15_ARATH1.620e-6644.03Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH30_ARATH4.264e-6643.01Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC1.252e-6342.16Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH1.328e-6337.77Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH28_ARATH1.669e-6340.89Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH27_ARATH3.102e-6140.75Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH5.634e-6140.96Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC7.977e-6040.30Probable xyloglucan endotransglucosylase/hydrolase... [more]
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InterPro
Analysis Name: InterProScan: C. arietinum ICC 4958, v2.0 (desi)
Date Performed: 2019-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 28..209
e-value: 1.1E-52
score: 178.1
IPR000757Glycoside hydrolase family 16PROSITEPS51762GH16_2coord: 5..217
score: 30.853
IPR016455Xyloglucan endotransglucosylase/hydrolasePIRSFPIRSF005604EndGlu_transfcoord: 4..282
e-value: 1.5E-100
score: 334.0
NoneNo IPR availableGENE3D2.60.120.200coord: 6..280
e-value: 4.8E-92
score: 310.2
NoneNo IPR availablePANTHERPTHR31062FAMILY NOT NAMEDcoord: 1..281
NoneNo IPR availablePANTHERPTHR31062:SF161coord: 1..281
IPR010713Xyloglucan endo-transglycosylase, C-terminalPFAMPF06955XET_Ccoord: 244..280
e-value: 1.6E-11
score: 43.9
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 48..268

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_07973.1_ICC4958_v2 ID=Ca_07973.1_ICC4958_v2; Name=Ca_07973.1; organism=Cicer arietinum; type=mRNA; length=2012bp
ATGACTACTTCATGCAATGCTTATTGGCCACCTTCACCTGCTTACTGGCC
AAGTTCTAAGTTCAACTCTATCAACTTTTACAAAGGTTTTACAAATCTTT
GGGGTCCTCAACACCAAAGAATAGATCAAAATGCATTAACAATTTGGCTT
GATAGAACCTCAGGAAGTGGATTCAAATCGGTTCGTCCGTTTCGATCCGG
TTACTTTGGTGCTTCTATTAAGCTTCAACCAGGTTATACTGCAGGAGTTA
TAACAGCTTTCTATGTAAGAAACAATTACACATTTTTTTTAGCTAATTAA
TTGTTATTAGTACTAATTAATGATAATGATTATTTTGATTAATTGTAGCT
ATCAAACAATGAGGCACATCCTGGTTACCATGATGAAGTGGACATTGAGT
TTCTAGGGACAACATTTGGAAAACCTTATACTTTGCAGACCAATGTTTAT
ATAAGAGGGAGTGGAGATGGGAAAATTGTTGGTAGAGAGATGAAGTTTCA
TCTATGGTTTGATCCTACCAAAGATTTTCATCACTATGCTATACTTTGGA
GTCCTAAGGAAATAATGTAAGTAACTCTAGATTTAACTGTTTTTCTGAAT
GTGAAATTGAAATTGAATAGATTGATTATTAGTTCTAGTCTAAAAAGGCA
GGGTAGACAGAGTAGATACTATTTCCTTTTTTTGCTGAGGTAGGACAGGT
AAAATGGATTCCGTGCTCTCACCGGAGTCAACAGACACTTAACACGACAT
TGATATTGATACTAATAAATAAATATCGATAATAATTTAAAAAAATAGAA
ATAATTAAATATATTATTAGACTATAACAATAATCAAATGTGTTGGTGTT
AGACAATGATAGGACACCAAAACATTCAATTCAAAGTGTTGTTACTACAT
ATCAATGGTTTGGGTTAGCTGACTACAGTGATTTGTAGAAATTTCATCCC
ATATGAAATTTTGATCCCTAAGATAAGAGATGAAGAGAATCCATTGGGTA
AGCTTGGATTCTGCATAAGTGGCATTGTTTTGATTGGTTCTTAATCTATT
GGTATCAAAGTTTAGGCAAGAGTGATTGATAGTTTGGAAAATGAAATTTT
TTATTTTTTGGAAGGTAGTGGAAAATGAAAGATTAAGAATATTATTTTGT
CTGAAATAAAGGAAGAAGGCAAATAGGAATTTGACAGGATTAATAATAAA
TCATATAGAAATACAAAATCAAGGTCACATGAATGGCACAAAAATCATAA
CATAGAAGTGTGGGGCAAACAAATATGATAACATCCAACTAATGAAAAGC
TATTGAAAAAGTAACATTAATTTATTGATGAAGGGTTATAAATTAAATAA
CTTTCAAAAAGCTGTACTAGCTATTATGTGAATCTTATAAATGATTATAA
TGGGTATGTCTCAAAGTTTCTAGCAAGTGGGCATGCACCAACCAACGAGT
TCAAAAGTAGTATTAGTATTGTAACGTAGTATTAAAATATGAGTTATAGC
ACTGTAAATTATAATTCTTTAATTAATAAAAAGACGGAATTACAATTGTT
TTGTAGTTAGAGATATTGATGTTTTGTATTGAGTTGATGTTATGACATAT
TATTATATAGTATTTGTTTTACACTAACATTGAGTAACATGTCAGATTCC
TTGTGGATGATGTGCCTATAAGGAGGTACCCGAGGAAGAGTGATGCAACA
TTTCCTATAAGACCAATGTGGCTTTATGGTTCAATATGGGATGCATCATC
ATGGGCAACTGAAGATGGAAAATACAAAGCTGATTACAAATATCAACCTT
TTGTTGCAAGGTATACAAATTTTAAAGCTAGTGGTTGCACAGCCTTTGCT
CCTCTTTGGTGCCATCCAGTTTCAGCCTCACCATATGGTTCTGGTGGGTT
AACCTCACAACAATATAGAGCTATGAGATGGGTGCAAAGATATCAACTCG
CTTATAACTATTGTCAAGACCCCAAAAGAGATCATAGATTAACACCCGAG
TGTTGGAGTTAA
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protein sequence of Ca_07973.1_ICC4958_v2

>Ca_07973.1_ICC4958_v2 ID=Ca_07973.1_ICC4958_v2; Name=Ca_07973.1_ICC4958_v2; organism=Cicer arietinum; type=polypeptide; length=282bp
MTTSCNAYWPPSPAYWPSSKFNSINFYKGFTNLWGPQHQRIDQNALTIWL
DRTSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGYHD
EVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIVGREMKFHLWFDPTKDFHH
YAILWSPKEIIFLVDDVPIRRYPRKSDATFPIRPMWLYGSIWDASSWATE
DGKYKADYKYQPFVARYTNFKASGCTAFAPLWCHPVSASPYGSGGLTSQQ
YRAMRWVQRYQLAYNYCQDPKRDHRLTPECWS
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mRNA from alignment at Ca_LG_3:41703594..41705605+

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_07973.1_ICC4958_v2 ID=Ca_07973.1_ICC4958_v2; Name=Ca_07973.1; organism=Cicer arietinum; type=mRNA; length=2012bp; location=Sequence derived from: Ca_LG_3:41703594..41705605+ (Cicer arietinum
ATGACTACTTCATGCAATGCTTATTGGCCACCTTCACCTGCTTACTGGCC AAGTTCTAAGTTCAACTCTATCAACTTTTACAAAGGTTTTACAAATCTTT GGGGTCCTCAACACCAAAGAATAGATCAAAATGCATTAACAATTTGGCTT GATAGAACCTCAGGAAGTGGATTCAAATCGGTTCGTCCGTTTCGATCCGG TTACTTTGGTGCTTCTATTAAGCTTCAACCAGGTTATACTGCAGGAGTTA TAACAGCTTTCTATGTAAGAAACAATTACACATTTTTTTTAGCTAATTAA TTGTTATTAGTACTAATTAATGATAATGATTATTTTGATTAATTGTAGCT ATCAAACAATGAGGCACATCCTGGTTACCATGATGAAGTGGACATTGAGT TTCTAGGGACAACATTTGGAAAACCTTATACTTTGCAGACCAATGTTTAT ATAAGAGGGAGTGGAGATGGGAAAATTGTTGGTAGAGAGATGAAGTTTCA TCTATGGTTTGATCCTACCAAAGATTTTCATCACTATGCTATACTTTGGA GTCCTAAGGAAATAATGTAAGTAACTCTAGATTTAACTGTTTTTCTGAAT GTGAAATTGAAATTGAATAGATTGATTATTAGTTCTAGTCTAAAAAGGCA GGGTAGACAGAGTAGATACTATTTCCTTTTTTTGCTGAGGTAGGACAGGT AAAATGGATTCCGTGCTCTCACCGGAGTCAACAGACACTTAACACGACAT TGATATTGATACTAATAAATAAATATCGATAATAATTTAAAAAAATAGAA ATAATTAAATATATTATTAGACTATAACAATAATCAAATGTGTTGGTGTT AGACAATGATAGGACACCAAAACATTCAATTCAAAGTGTTGTTACTACAT ATCAATGGTTTGGGTTAGCTGACTACAGTGATTTGTAGAAATTTCATCCC ATATGAAATTTTGATCCCTAAGATAAGAGATGAAGAGAATCCATTGGGTA AGCTTGGATTCTGCATAAGTGGCATTGTTTTGATTGGTTCTTAATCTATT GGTATCAAAGTTTAGGCAAGAGTGATTGATAGTTTGGAAAATGAAATTTT TTATTTTTTGGAAGGTAGTGGAAAATGAAAGATTAAGAATATTATTTTGT CTGAAATAAAGGAAGAAGGCAAATAGGAATTTGACAGGATTAATAATAAA TCATATAGAAATACAAAATCAAGGTCACATGAATGGCACAAAAATCATAA CATAGAAGTGTGGGGCAAACAAATATGATAACATCCAACTAATGAAAAGC TATTGAAAAAGTAACATTAATTTATTGATGAAGGGTTATAAATTAAATAA CTTTCAAAAAGCTGTACTAGCTATTATGTGAATCTTATAAATGATTATAA TGGGTATGTCTCAAAGTTTCTAGCAAGTGGGCATGCACCAACCAACGAGT TCAAAAGTAGTATTAGTATTGTAACGTAGTATTAAAATATGAGTTATAGC ACTGTAAATTATAATTCTTTAATTAATAAAAAGACGGAATTACAATTGTT TTGTAGTTAGAGATATTGATGTTTTGTATTGAGTTGATGTTATGACATAT TATTATATAGTATTTGTTTTACACTAACATTGAGTAACATGTCAGATTCC TTGTGGATGATGTGCCTATAAGGAGGTACCCGAGGAAGAGTGATGCAACA TTTCCTATAAGACCAATGTGGCTTTATGGTTCAATATGGGATGCATCATC ATGGGCAACTGAAGATGGAAAATACAAAGCTGATTACAAATATCAACCTT TTGTTGCAAGGTATACAAATTTTAAAGCTAGTGGTTGCACAGCCTTTGCT CCTCTTTGGTGCCATCCAGTTTCAGCCTCACCATATGGTTCTGGTGGGTT AACCTCACAACAATATAGAGCTATGAGATGGGTGCAAAGATATCAACTCG CTTATAACTATTGTCAAGACCCCAAAAGAGATCATAGATTAACACCCGAG TGTTGGAGTTAA
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Coding sequence (CDS) from alignment at Ca_LG_3:41703594..41705605+

>Ca_07973.1_ICC4958_v2 ID=Ca_07973.1_ICC4958_v2; Name=Ca_07973.1; organism=Cicer arietinum; type=CDS; length=849bp; location=Sequence derived from: Ca_LG_3:41703594..41705605+ (Cicer arietinum
ATGACTACTTCATGCAATGCTTATTGGCCACCTTCACCTGCTTACTGGCC
AAGTTCTAAGTTCAACTCTATCAACTTTTACAAAGGTTTTACAAATCTTT
GGGGTCCTCAACACCAAAGAATAGATCAAAATGCATTAACAATTTGGCTT
GATAGAACCTCAGGAAGTGGATTCAAATCGGTTCGTCCGTTTCGATCCGG
TTACTTTGGTGCTTCTATTAAGCTTCAACCAGGTTATACTGCAGGAGTTA
TAACAGCTTTCTATCTATCAAACAATGAGGCACATCCTGGTTACCATGAT
GAAGTGGACATTGAGTTTCTAGGGACAACATTTGGAAAACCTTATACTTT
GCAGACCAATGTTTATATAAGAGGGAGTGGAGATGGGAAAATTGTTGGTA
GAGAGATGAAGTTTCATCTATGGTTTGATCCTACCAAAGATTTTCATCAC
TATGCTATACTTTGGAGTCCTAAGGAAATAATATTCCTTGTGGATGATGT
GCCTATAAGGAGGTACCCGAGGAAGAGTGATGCAACATTTCCTATAAGAC
CAATGTGGCTTTATGGTTCAATATGGGATGCATCATCATGGGCAACTGAA
GATGGAAAATACAAAGCTGATTACAAATATCAACCTTTTGTTGCAAGGTA
TACAAATTTTAAAGCTAGTGGTTGCACAGCCTTTGCTCCTCTTTGGTGCC
ATCCAGTTTCAGCCTCACCATATGGTTCTGGTGGGTTAACCTCACAACAA
TATAGAGCTATGAGATGGGTGCAAAGATATCAACTCGCTTATAACTATTG
TCAAGACCCCAAAAGAGATCATAGATTAACACCCGAGTGTTGGAGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000757GH16
IPR016455XTH
IPR010713XET_C
IPR013320ConA-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016762xyloglucan:xyloglucosyl transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0042546cell wall biogenesis
GO:0010411xyloglucan metabolic process
GO:0006073obsolete cellular glucan metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0048046apoplast
GO:0005618cell wall