Ca_08384.1, Ca_08384.1_ICC4958_v2 (mRNA) Cicer arietinum

Transcript Overview
NameCa_08384.1
Unique NameCa_08384.1_ICC4958_v2
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length2207
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca_LG_4supercontigCa_LG_4:4833557..4835763 -Cicer arietinum ICC 4958 genome v2n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum ICC 4958 genome v22015-08-11
InterProScan: C. arietinum ICC 4958, v2.0 (desi)2019-05-21
BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot2019-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
caipsR324Pisum sativum Cameor genome v1aPisum sativum
caipvR0358Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caipvR0394Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caipvR0510Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caivuR0473Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivuR0509Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caiccR0484Cajanus cajan Asha genome v1.0Cajanus cajan
caiccR0513Cajanus cajan Asha genome v1.0Cajanus cajan
ancaiL0361Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0426Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0877Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL1124Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiL649Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaiL903Vigna angularis Jingnong 6 genome v1.1Vigna angularis
caizwsR366Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caizwsR413Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caitifR341Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhR335Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caitifR425Vicia faba cv. Tiffany genome v1.0Vicia faba
caitifR445Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhR444Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caivrvR361Vigna radiata cv. VC1973A genome v6.0Vigna radiata
caivrvR384Vigna radiata cv. VC1973A genome v6.0Vigna radiata
caivssR0437Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivssR0457Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivuaR453Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caivuaR462Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caivuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caicanR0481Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanR0489Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan07g249300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigun09g215300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.2g179960.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan04g225200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.001G042200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun08g045400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
jg55302.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_01265Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.009G087400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_034302Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Tiffany.R1.2g145680.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat5g032760.1Pisum sativum Cameor genome v1aPisum sativum
evm.model.Chr08.295Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014648669.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_014644775.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat05G0112500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Tiffany.R1.3g171800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
evm.model.Chr09.1566Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004501324.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_004498757.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ca_08384Ca_08384_ICC4958_v2Cicer arietinumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_08384.1_ICC4958_v2Ca_08384.1_ICC4958_v2Cicer arietinumpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_08384.1.cds3Ca_08384.1.cds3_ICC4958_v2Cicer arietinumCDS
Ca_08384.1.cds2Ca_08384.1.cds2_ICC4958_v2Cicer arietinumCDS
Ca_08384.1.cds1Ca_08384.1.cds1_ICC4958_v2Cicer arietinumCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_08384.1.exon3Ca_08384.1.exon3_ICC4958_v2Cicer arietinumexon
Ca_08384.1.exon2Ca_08384.1.exon2_ICC4958_v2Cicer arietinumexon
Ca_08384.1.exon1Ca_08384.1.exon1_ICC4958_v2Cicer arietinumexon


Homology
[Close]
BLAST of Ca_08384.1 vs. DB:Swiss
Match: WRK18_ARATH (WRKY transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=WRKY18 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.072e-49
Identity = 86/170 (50.59%), Postives = 107/170 (62.94%), Query Frame = 1 
Query:   43 IPSRDTEVTAYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDPSILVTTYEGEHNHGQQQTEISLTSSNQSESTPTYSNLVPSSSVHSIRNNDLGTPPVSTLDLVN------YTENQK-SSIQQFLVQQMATSLTNDPNFTAALVTAISGRFMDRT 531
            +P+  ++ +  V+DG+QWRKYGQKVTRDNPSPRAYF+CSFAPSCPVKKKVQRS EDPS+LV TYEG HNH            N SE   T                  G     TLDLVN        +N++ +++Q+ L+QQMA+SLT D  FTAAL  AISGR M+++
Sbjct:  164 VPTETSDTSLTVKDGFQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPSLLVATYEGTHNH---------LGPNASEGDATSQ----------------GGSSTVTLDLVNGCHRLALEKNERDNTMQEVLIQQMASSLTKDSKFTAALAAAISGRLMEQS 308
[Close]
BLAST of Ca_08384.1 vs. DB:Swiss
Match: WRK40_ARATH (Probable WRKY transcription factor 40 OS=Arabidopsis thaliana OX=3702 GN=WRKY40 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.438e-49
Identity = 90/173 (52.02%), Postives = 110/173 (63.58%), Query Frame = 1 
Query:   58 TEVTAYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDPSILVTTYEGEHNH---GQQQTEISL---TSSNQSESTPTYSN-----LVPSSSVHSIRNNDLGTPPVSTLDLVNYTENQKSSIQQFLVQQMATSLTNDPNFTAALVTAISGRFMDRTSQEK 543
            ++ T  V+DGYQWRKYGQKVTRDNPSPRAYFKC+ APSC VKKKVQRSVED S+LV TYEGEHNH    Q  +   L    S   S STP  +N      VP ++V  I +  + T P S +D           +Q+ LV+QMA+SLT DPNFTAAL  A++G+   +   EK
Sbjct:  139 SDTTLVVKDGYQWRKYGQKVTRDNPSPRAYFKCACAPSCSVKKKVQRSVEDQSVLVATYEGEHNHPMPSQIDSNNGLNRHISHGGSASTPVAANRRSSLTVPVTTVDMIESKKV-TSPTSRIDF--------PQVQKLLVEQMASSLTKDPNFTAALAAAVTGKLYQQNHTEK 302
[Close]
BLAST of Ca_08384.1 vs. DB:Swiss
Match: WRK60_ARATH (Probable WRKY transcription factor 60 OS=Arabidopsis thaliana OX=3702 GN=WRKY60 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.026e-47
Identity = 85/159 (53.46%), Postives = 101/159 (63.52%), Query Frame = 1 
Query:   55 DTEVTAYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDPSILVTTYEGEHNHGQQQTEISLTSSNQSESTPTYSNLVPSSSVHSIRNNDLGTPPVSTLDLVNYTENQKSSIQQFLVQQMATSLTNDPNFTAALVTAISGRFMDRT 531
            DT +T  V+DGYQWRKYGQK+TRDNPSPRAYF+CSF+PSC VKKKVQRS EDPS LV TYEG HNH         T  + S S     +LV             G  PV         + ++ +IQ+ LVQQMA+SLT DP FTAAL TAISGR ++ +
Sbjct:  140 DTSLT--VKDGYQWRKYGQKITRDNPSPRAYFRCSFSPSCLVKKKVQRSAEDPSFLVATYEGTHNH---------TGPHASVSRTVKLDLVQG-----------GLEPVEE-------KKERGTIQEVLVQQMASSLTKDPKFTAALATAISGRLIEHS 269
[Close]
BLAST of Ca_08384.1 vs. DB:Swiss
Match: WRK71_ORYSI (WRKY transcription factor WRKY71 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY71 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 9.553e-44
Identity = 77/161 (47.83%), Postives = 103/161 (63.98%), Query Frame = 1 
Query:   58 TEVTAYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDPSILVTTYEGEHNHGQQQTEISLTSSNQSESTPTYSNLVPSSSVHSIRNNDLGT--PPVSTLDLVNYTENQKSS---IQQFLVQQMATSLTNDPNFTAALVTAISGRFMD 525
            ++++  V+DGYQWRKYGQKVT+DNP PRAYF+CSFAP+CPVKKKVQRS ED +ILV TYEGEHNHGQ    +   + N   S  +      + +              PV    +VN  +   ++   I++ L +QMA +LT DP+F AALVTA+SGR ++
Sbjct:  186 SDLSLVVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSAEDNTILVATYEGEHNHGQPPPPLQSAAQNSDGSGKSAGKPPHAPAAAPPAPVVPHRQHEPV----VVNGEQQAAAASEMIRRNLAEQMAMTLTRDPSFKAALVTALSGRILE 342
[Close]
BLAST of Ca_08384.1 vs. DB:Swiss
Match: WRK71_ORYSJ (WRKY transcription factor WRKY71 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY71 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.041e-43
Identity = 77/161 (47.83%), Postives = 103/161 (63.98%), Query Frame = 1 
Query:   58 TEVTAYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDPSILVTTYEGEHNHGQQQTEISLTSSNQSESTPTYSNLVPSSSVHSIRNNDLGT--PPVSTLDLVNYTENQKSS---IQQFLVQQMATSLTNDPNFTAALVTAISGRFMD 525
            ++++  V+DGYQWRKYGQKVT+DNP PRAYF+CSFAP+CPVKKKVQRS ED +ILV TYEGEHNHGQ    +   + N   S  +      + +              PV    +VN  +   ++   I++ L +QMA +LT DP+F AALVTA+SGR ++
Sbjct:  186 SDLSLVVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSAEDNTILVATYEGEHNHGQPPPPLQSAAQNSDGSGKSAGKPPHAPAAAPPAPVVPHRQHEPV----VVNGEQQAAAASEMIRRNLAEQMAMTLTRDPSFKAALVTALSGRILE 342
[Close]
BLAST of Ca_08384.1 vs. DB:Swiss
Match: WRK28_ORYSJ (WRKY transcription factor WRKY28 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY28 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 2.339e-41
Identity = 74/160 (46.25%), Postives = 98/160 (61.25%), Query Frame = 1 
Query:   58 TEVTAYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDPSILVTTYEGEHNHGQ----QQTEISLTSSNQSESTPTYSNLVPSSSVHSIRNNDLGTPPVSTLDLVNYTENQKSSIQQFLVQQMATSLTNDPNFTAALVTAISGRFMD 525
            ++++  V+DGYQWRKYGQKVT+DNP PRAYF+CSFAP+CPVKKKVQRS +D ++LV TYEGEHNH Q         +  ++  S+  P      PS++   +R              V   +N        L +QMA +LT DP F AALVTA+SGR ++
Sbjct:  244 SDLSLVVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSADDNTVLVATYEGEHNHAQPPHHDAGSKTAAAAKHSQHQPP-----PSAAAAVVRQQQEQAAAAGPSTEVAARKN--------LAEQMAATLTRDPGFKAALVTALSGRILE 390
[Close]
BLAST of Ca_08384.1 vs. DB:Swiss
Match: WRK28_ORYSI (WRKY transcription factor WRKY28 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY28 PE=3 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 2.507e-41
Identity = 74/160 (46.25%), Postives = 98/160 (61.25%), Query Frame = 1 
Query:   58 TEVTAYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDPSILVTTYEGEHNHGQ----QQTEISLTSSNQSESTPTYSNLVPSSSVHSIRNNDLGTPPVSTLDLVNYTENQKSSIQQFLVQQMATSLTNDPNFTAALVTAISGRFMD 525
            ++++  V+DGYQWRKYGQKVT+DNP PRAYF+CSFAP+CPVKKKVQRS +D ++LV TYEGEHNH Q         +  ++  S+  P      PS++   +R              V   +N        L +QMA +LT DP F AALVTA+SGR ++
Sbjct:  244 SDLSLVVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSADDNTVLVATYEGEHNHAQPPHHDAGSKTAAAAKHSQHQPP-----PSAAAAVVRQQQEQAAAAGPSTEVAARKN--------LAEQMAATLTRDPGFKAALVTALSGRILE 390
[Close]
BLAST of Ca_08384.1 vs. DB:Swiss
Match: WRK76_ORYSI (WRKY transcription factor WRKY76 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY76 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.140e-40
Identity = 77/163 (47.24%), Postives = 97/163 (59.51%), Query Frame = 1 
Query:   58 TEVTAYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDPSILVTTYEGEHNHGQ---QQTEISLTSSNQSESTPTYSNL---VPSSSVHSIRNND-------LGTPPVSTLDLVNYTENQKSSIQQFLVQQMATSLTNDPNFTAALVTAI 507
            ++ +  V+DGYQWRKYGQKVTRDNPSPRAYF+C+FAPSCPVKKKVQRS ED S+LV TYEGEHNH     +  E+         S P   ++    P+ ++   +N            PP   L  V   E      +  LV+QMA++LT+DP FT AL  AI
Sbjct:  159 SDTSLVVKDGYQWRKYGQKVTRDNPSPRAYFRCAFAPSCPVKKKVQRSAEDSSLLVATYEGEHNHPHPSPRAGELPAAVGGAGGSLPCSISINSSGPTITLDLTKNGGAVQVVEAAHPPPPPDLKEV-CREVASPEFRTALVEQMASALTSDPKFTGALAAAI 320
[Close]
BLAST of Ca_08384.1 vs. DB:Swiss
Match: WRK76_ORYSJ (WRKY transcription factor WRKY76 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY76 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.537e-40
Identity = 77/163 (47.24%), Postives = 98/163 (60.12%), Query Frame = 1 
Query:   58 TEVTAYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDPSILVTTYEGEHNHGQ---QQTEISLTSSNQSESTPTYSNL---VPSSSVHSIRNND-------LGTPPVSTLDLVNYTENQKSSIQQFLVQQMATSLTNDPNFTAALVTAI 507
            ++ +  V+DGYQWRKYGQKVTRDNPSPRAYF+C+FAPSCPVKKKVQRS ED S+LV TYEGEHNH     +  E+   +     S P   ++    P+ ++   +N            PP   L  V   E      +  LV+QMA++LT+DP FT AL  AI
Sbjct:  159 SDTSLVVKDGYQWRKYGQKVTRDNPSPRAYFRCAFAPSCPVKKKVQRSAEDSSLLVATYEGEHNHPHPSPRAGELPAAAGGAGGSLPCSISINSSGPTITLDLTKNGGAVQVVEAAHPPPPPDLKEV-CREVASPEFRTALVEQMASALTSDPKFTGALAAAI 320
[Close]
BLAST of Ca_08384.1 vs. DB:Swiss
Match: WRK62_ORYSJ (WRKY transcription factor WRKY62 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY62 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.604e-36
Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 1 
Query:   76 VRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDPSILVTTYEGEHNHG--QQQTEISLTS------SNQSESTPTYSNLVPSSSVHSIR---NNDLGTPPVSTLDLVNYTENQK------SSIQQFLVQQMATSLTNDPNFTAALVTAISGRFMDR 528
            V+DGYQWRKYGQKVTRDNP PRAYF+C+FAPSCPVKKK+QR  ED S+LV TYEGEHNH    Q TE   +       +  S S+P   ++  +SS  +I     N  G+  +++  +     + +        +++ LV+++   L ND  F  A+  A++ R +D+
Sbjct:  143 VKDGYQWRKYGQKVTRDNPYPRAYFRCAFAPSCPVKKKLQRCAEDRSMLVATYEGEHNHALSTQTTEFVASGCTTSQHAGGSSSSPLPCSISINSSGRTITLDLTNQAGSGSIASCGVEAAAVSGELVTVLSPELRRHLVEEVVQVLKNDAEFVEAVTNAVAARVVDQ 310
The following BLAST results are available for this feature:
BLAST of Ca_08384.1 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
WRK18_ARATH1.072e-4950.59WRKY transcription factor 18 OS=Arabidopsis thalia... [more]
WRK40_ARATH4.438e-4952.02Probable WRKY transcription factor 40 OS=Arabidops... [more]
WRK60_ARATH1.026e-4753.46Probable WRKY transcription factor 60 OS=Arabidops... [more]
WRK71_ORYSI9.553e-4447.83WRKY transcription factor WRKY71 OS=Oryza sativa s... [more]
WRK71_ORYSJ1.041e-4347.83WRKY transcription factor WRKY71 OS=Oryza sativa s... [more]
WRK28_ORYSJ2.339e-4146.25WRKY transcription factor WRKY28 OS=Oryza sativa s... [more]
WRK28_ORYSI2.507e-4146.25WRKY transcription factor WRKY28 OS=Oryza sativa s... [more]
WRK76_ORYSI2.140e-4047.24WRKY transcription factor WRKY76 OS=Oryza sativa s... [more]
WRK76_ORYSJ5.537e-4047.24WRKY transcription factor WRKY76 OS=Oryza sativa s... [more]
WRK62_ORYSJ4.604e-3641.67WRKY transcription factor WRKY62 OS=Oryza sativa s... [more]
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InterPro
Analysis Name: InterProScan: C. arietinum ICC 4958, v2.0 (desi)
Date Performed: 2019-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003657WRKY domainSMARTSM00774WRKY_clscoord: 26..86
e-value: 3.1E-35
score: 133.1
IPR003657WRKY domainPFAMPF03106WRKYcoord: 28..84
e-value: 1.2E-24
score: 86.3
IPR003657WRKY domainPROSITEPS50811WRKYcoord: 21..87
score: 25.844
IPR036576WRKY domain superfamilyGENE3D2.20.25.80coord: 14..87
e-value: 2.1E-28
score: 99.8
IPR036576WRKY domain superfamilySUPERFAMILY118290WRKY DNA-binding domaincoord: 24..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..125
NoneNo IPR availablePANTHERPTHR31429FAMILY NOT NAMEDcoord: 23..176
NoneNo IPR availablePANTHERPTHR31429:SF3WRKY TRANSCRIPTION FACTOR 40-RELATEDcoord: 23..176

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_08384.1_ICC4958_v2 ID=Ca_08384.1_ICC4958_v2; Name=Ca_08384.1; organism=Cicer arietinum; type=mRNA; length=2207bp
ATGGAACCAACGTGTGTGGATACTTCTCTCAATCTCAACGTTATTCCTTC
TCGAGACACAGAAGTTACCGCGGTTAGTATATATTTTCACATAACCGTCA
TAGTTTTTGTCGTTATTTATACTTTTTTCTTTATATTACATTGAAAAAAT
ATATATATAACTTTATATATGATAATTCAGGAGAAAGTTTTGGTCGAAGA
GTTGGAGCGTCTAAATCATGAAAATAAAATATTAACGGAGAGCTTGAACC
ACATGTGCAATAACTATGTTGTTTTGCAAAAGCATTTGAGTCGATTTAAC
CAACCGAGTGATACAAATTTTGAAAATGAAATAGTGACACAGTCACGGAA
GAGAAAAGCGGGGAGCATTGAAAATTGTGTCAATCAATTTGGTACTAATA
GTATTGTTGAGTGTAGCACCACTACTACTGAGGAGACATTCAAAAGAACC
ACACATAATTCATCGCCAAAAATTTCCAAGGTTCTTGTATGGACAGATGC
ATCCAATACTGGCTTAGTAAGTTCCACAATATCATATACCGATATTAATT
AATCATATATAGTTATATATTTTTATTTTATTTTTGGACTGTATATAATA
AGATTAAATTTTTAGGCTCCAAAGTACTAACTTAGATCTGGGTTTTTCAT
ATTGAAGTATGTGAGGGATGGATATCAATGGAGGAAATACGGTCAGAAAG
TTACTAGAGACAACCCATCTCCTAGGGCTTACTTCAAGTGCTCCTTTGCC
CCAAGCTGCCCAGTGAAGAAGAAGGTATTCAATTAGAAGTAGTAGCTAAT
TAGTGGCACATCTCTTAATTCATGACAAAATAAATCACCATTTTTAAAAT
ACTCTATTTAATTGATGAAAATTCGTATAACTCTCTTACTAGATTATGTG
AATCTCATATGAAAATTTGATTGGACTAGTGTGAATTTTAACTAATAAAA
GAGAATATATTAAAAAATATATATTAAAGAGTGCGTTATTAGCATTAATT
AAAATAATATATAAAATTAATTACAAAAATATTATTCGTATGTTAAAGAG
TGTCTTGGAAAGTGTTCTTAGAGAAGATTCTTAAAAATTGCAGTTCAGCA
AAATTTTAAAATGATATATCAAATTAATTAAAAATGATCAACCTAATTAA
TAACTTCTTTGGATCAATTAATTAAGTCTAAAAATGATATAAGATTGATG
ATTTTCATTTTCGGTTATTTTAATATTTTAGTAAATTTAAGAACTAAATT
GTCTAAATGTATTATACAATTTTTTATTCCAAGAAAAATCCTTTATATAA
TTTCAAAGATCAATTGATGATTACAAAATTTTATTACTCACTCCACTATT
GATTATAAATAAAAGTAGACAACTTCACACTTATTAGAAAATTTAAGGAT
ATCGTCACTAGATAGAGTGCAAGTAGTTAAGACAACAGAAGAAATATACC
TTTTCTCTTACAAAATTAAATTATTATTTTTTACAATATTCACAATCGGG
ATTTATGTAAATACTTCGAAATGGAATGATAATGTAAGAAATAATTTTGA
TACAAACATTAATTAGGTGTATTGAAAAATAGGCATCAAGAAGTAGTAAG
ACCGTTTGTGTTTTAAAAATTATTAAGTACATAATAGTTTGGTTGGTATT
GAAACGGTAAACCAAAATCAATTCAAAATTTAAACTATTTAAATATAAAA
TAATAATGACGTGATTTTACATAATAGATGGTTGAGTATTATATTAACTA
AACTCTAAAATATGAGAATGTTTTTATATATGTATTTTTTATATTTAAGG
AAGTTAGAACAATTTAATTAACCAAGTCTGTTTATGGTATTATATAGGTG
CAAAGAAGTGTAGAAGACCCATCAATTTTAGTGACAACATATGAAGGAGA
GCACAACCATGGGCAACAACAAACAGAAATATCACTAACTAGTTCAAACC
AAAGTGAAAGTACCCCTACATATAGTAATTTAGTTCCTTCATCTTCAGTA
CACTCAATTAGGAATAATGATTTGGGTACACCTCCAGTTTCAACGCTTGA
CTTGGTCAACTATACCGAAAACCAAAAGTCTTCTATCCAACAGTTTTTAG
TTCAGCAAATGGCCACTTCTTTGACAAATGATCCTAATTTCACAGCTGCA
CTTGTCACCGCCATTTCAGGAAGATTTATGGATCGCACATCACAGGAAAA
ACGTTGA
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protein sequence of Ca_08384.1_ICC4958_v2

>Ca_08384.1_ICC4958_v2 ID=Ca_08384.1_ICC4958_v2; Name=Ca_08384.1_ICC4958_v2; organism=Cicer arietinum; type=polypeptide; length=182bp
MEPTCVDTSLNLNVIPSRDTEVTAYVRDGYQWRKYGQKVTRDNPSPRAYF
KCSFAPSCPVKKKVQRSVEDPSILVTTYEGEHNHGQQQTEISLTSSNQSE
STPTYSNLVPSSSVHSIRNNDLGTPPVSTLDLVNYTENQKSSIQQFLVQQ
MATSLTNDPNFTAALVTAISGRFMDRTSQEKR
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mRNA from alignment at Ca_LG_4:4833557..4835763-

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_08384.1_ICC4958_v2 ID=Ca_08384.1_ICC4958_v2; Name=Ca_08384.1; organism=Cicer arietinum; type=mRNA; length=2207bp; location=Sequence derived from: Ca_LG_4:4833557..4835763- (Cicer arietinum
ATGGAACCAACGTGTGTGGATACTTCTCTCAATCTCAACGTTATTCCTTC
TCGAGACACAGAAGTTACCGCGGTTAGTATATATTTTCACATAACCGTCA
TAGTTTTTGTCGTTATTTATACTTTTTTCTTTATATTACATTGAAAAAAT
ATATATATAACTTTATATATGATAATTCAGGAGAAAGTTTTGGTCGAAGA
GTTGGAGCGTCTAAATCATGAAAATAAAATATTAACGGAGAGCTTGAACC
ACATGTGCAATAACTATGTTGTTTTGCAAAAGCATTTGAGTCGATTTAAC
CAACCGAGTGATACAAATTTTGAAAATGAAATAGTGACACAGTCACGGAA
GAGAAAAGCGGGGAGCATTGAAAATTGTGTCAATCAATTTGGTACTAATA
GTATTGTTGAGTGTAGCACCACTACTACTGAGGAGACATTCAAAAGAACC
ACACATAATTCATCGCCAAAAATTTCCAAGGTTCTTGTATGGACAGATGC
ATCCAATACTGGCTTAGTAAGTTCCACAATATCATATACCGATATTAATT
AATCATATATAGTTATATATTTTTATTTTATTTTTGGACTGTATATAATA
AGATTAAATTTTTAGGCTCCAAAGTACTAACTTAGATCTGGGTTTTTCAT
ATTGAAGTATGTGAGGGATGGATATCAATGGAGGAAATACGGTCAGAAAG
TTACTAGAGACAACCCATCTCCTAGGGCTTACTTCAAGTGCTCCTTTGCC
CCAAGCTGCCCAGTGAAGAAGAAGGTATTCAATTAGAAGTAGTAGCTAAT
TAGTGGCACATCTCTTAATTCATGACAAAATAAATCACCATTTTTAAAAT
ACTCTATTTAATTGATGAAAATTCGTATAACTCTCTTACTAGATTATGTG
AATCTCATATGAAAATTTGATTGGACTAGTGTGAATTTTAACTAATAAAA
GAGAATATATTAAAAAATATATATTAAAGAGTGCGTTATTAGCATTAATT
AAAATAATATATAAAATTAATTACAAAAATATTATTCGTATGTTAAAGAG
TGTCTTGGAAAGTGTTCTTAGAGAAGATTCTTAAAAATTGCAGTTCAGCA
AAATTTTAAAATGATATATCAAATTAATTAAAAATGATCAACCTAATTAA
TAACTTCTTTGGATCAATTAATTAAGTCTAAAAATGATATAAGATTGATG
ATTTTCATTTTCGGTTATTTTAATATTTTAGTAAATTTAAGAACTAAATT
GTCTAAATGTATTATACAATTTTTTATTCCAAGAAAAATCCTTTATATAA
TTTCAAAGATCAATTGATGATTACAAAATTTTATTACTCACTCCACTATT
GATTATAAATAAAAGTAGACAACTTCACACTTATTAGAAAATTTAAGGAT
ATCGTCACTAGATAGAGTGCAAGTAGTTAAGACAACAGAAGAAATATACC
TTTTCTCTTACAAAATTAAATTATTATTTTTTACAATATTCACAATCGGG
ATTTATGTAAATACTTCGAAATGGAATGATAATGTAAGAAATAATTTTGA
TACAAACATTAATTAGGTGTATTGAAAAATAGGCATCAAGAAGTAGTAAG
ACCGTTTGTGTTTTAAAAATTATTAAGTACATAATAGTTTGGTTGGTATT
GAAACGGTAAACCAAAATCAATTCAAAATTTAAACTATTTAAATATAAAA
TAATAATGACGTGATTTTACATAATAGATGGTTGAGTATTATATTAACTA
AACTCTAAAATATGAGAATGTTTTTATATATGTATTTTTTATATTTAAGG
AAGTTAGAACAATTTAATTAACCAAGTCTGTTTATGGTATTATATAGGTG
CAAAGAAGTGTAGAAGACCCATCAATTTTAGTGACAACATATGAAGGAGA
GCACAACCATGGGCAACAACAAACAGAAATATCACTAACTAGTTCAAACC
AAAGTGAAAGTACCCCTACATATAGTAATTTAGTTCCTTCATCTTCAGTA
CACTCAATTAGGAATAATGATTTGGGTACACCTCCAGTTTCAACGCTTGA
CTTGGTCAACTATACCGAAAACCAAAAGTCTTCTATCCAACAGTTTTTAG
TTCAGCAAATGGCCACTTCTTTGACAAATGATCCTAATTTCACAGCTGCA
CTTGTCACCGCCATTTCAGGAAGATTTATGGATCGCACATCACAGGAAAA
ACGTTGA
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Coding sequence (CDS) from alignment at Ca_LG_4:4833557..4835763-

>Ca_08384.1_ICC4958_v2 ID=Ca_08384.1_ICC4958_v2; Name=Ca_08384.1; organism=Cicer arietinum; type=CDS; length=549bp; location=Sequence derived from: Ca_LG_4:4833557..4835763- (Cicer arietinum
ATGGAACCAACGTGTGTGGATACTTCTCTCAATCTCAACGTTATTCCTTC
TCGAGACACAGAAGTTACCGCGTATGTGAGGGATGGATATCAATGGAGGA
AATACGGTCAGAAAGTTACTAGAGACAACCCATCTCCTAGGGCTTACTTC
AAGTGCTCCTTTGCCCCAAGCTGCCCAGTGAAGAAGAAGGTGCAAAGAAG
TGTAGAAGACCCATCAATTTTAGTGACAACATATGAAGGAGAGCACAACC
ATGGGCAACAACAAACAGAAATATCACTAACTAGTTCAAACCAAAGTGAA
AGTACCCCTACATATAGTAATTTAGTTCCTTCATCTTCAGTACACTCAAT
TAGGAATAATGATTTGGGTACACCTCCAGTTTCAACGCTTGACTTGGTCA
ACTATACCGAAAACCAAAAGTCTTCTATCCAACAGTTTTTAGTTCAGCAA
ATGGCCACTTCTTTGACAAATGATCCTAATTTCACAGCTGCACTTGTCAC
CGCCATTTCAGGAAGATTTATGGATCGCACATCACAGGAAAAACGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003657WRKY_dom
IPR036576WRKY_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription