Ca_08540.1, Ca_08540.1_ICC4958_v2 (mRNA) Cicer arietinum

Transcript Overview
NameCa_08540.1
Unique NameCa_08540.1_ICC4958_v2
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length5135
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca_LG_4supercontigCa_LG_4:6781284..6786418 -Cicer arietinum ICC 4958 genome v2n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum ICC 4958 genome v22015-08-11
InterProScan: C. arietinum ICC 4958, v2.0 (desi)2019-05-21
BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot2019-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
caipsR313Pisum sativum Cameor genome v1aPisum sativum
caipsR332Pisum sativum Cameor genome v1aPisum sativum
caipsR368Pisum sativum Cameor genome v1aPisum sativum
caipvR0430Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caipvR0463Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caivuR0392Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivuR0447Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caiccR0442Cajanus cajan Asha genome v1.0Cajanus cajan
caiccR0469Cajanus cajan Asha genome v1.0Cajanus cajan
ancaiL0820Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL0981Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiL1300Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiL259Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaiL353Vigna angularis Jingnong 6 genome v1.1Vigna angularis
caizwsR344Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caizwsR374Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
caitifR358Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhR349Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caitifR467Vicia faba cv. Tiffany genome v1.0Vicia faba
caivfhR466Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
caivrvR309Vigna radiata cv. VC1973A genome v6.0Vigna radiata
caivrvR432Vigna radiata cv. VC1973A genome v6.0Vigna radiata
caivssR0449Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivssR0525Vicia sativa cv. Studenica genome v1.0Vicia sativa
caivuaR367Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caivuaR374Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
caicanR0367Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
caicanR0382Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.007G186000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun07g153800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_15550Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014658911.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_007127Cajanus cajan Asha genome v1.0Cajanus cajan
jg3143.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_31715Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.3g083240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr07.1288.1.62113176Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_10118Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat06G0396800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan10g096300Vigna angularis Jingnong 6 genome v1.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-XM_004495727.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ca_08540Ca_08540_ICC4958_v2Cicer arietinumgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_08540.1.cds14Ca_08540.1.cds14_ICC4958_v2Cicer arietinumCDS
Ca_08540.1.cds13Ca_08540.1.cds13_ICC4958_v2Cicer arietinumCDS
Ca_08540.1.cds12Ca_08540.1.cds12_ICC4958_v2Cicer arietinumCDS
Ca_08540.1.cds11Ca_08540.1.cds11_ICC4958_v2Cicer arietinumCDS
Ca_08540.1.cds10Ca_08540.1.cds10_ICC4958_v2Cicer arietinumCDS
Ca_08540.1.cds9Ca_08540.1.cds9_ICC4958_v2Cicer arietinumCDS
Ca_08540.1.cds8Ca_08540.1.cds8_ICC4958_v2Cicer arietinumCDS
Ca_08540.1.cds7Ca_08540.1.cds7_ICC4958_v2Cicer arietinumCDS
Ca_08540.1.cds6Ca_08540.1.cds6_ICC4958_v2Cicer arietinumCDS
Ca_08540.1.cds5Ca_08540.1.cds5_ICC4958_v2Cicer arietinumCDS
Ca_08540.1.cds4Ca_08540.1.cds4_ICC4958_v2Cicer arietinumCDS
Ca_08540.1.cds3Ca_08540.1.cds3_ICC4958_v2Cicer arietinumCDS
Ca_08540.1.cds2Ca_08540.1.cds2_ICC4958_v2Cicer arietinumCDS
Ca_08540.1.cds1Ca_08540.1.cds1_ICC4958_v2Cicer arietinumCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Ca_08540.1.exon14Ca_08540.1.exon14_ICC4958_v2Cicer arietinumexon
Ca_08540.1.exon13Ca_08540.1.exon13_ICC4958_v2Cicer arietinumexon
Ca_08540.1.exon12Ca_08540.1.exon12_ICC4958_v2Cicer arietinumexon
Ca_08540.1.exon11Ca_08540.1.exon11_ICC4958_v2Cicer arietinumexon
Ca_08540.1.exon10Ca_08540.1.exon10_ICC4958_v2Cicer arietinumexon
Ca_08540.1.exon9Ca_08540.1.exon9_ICC4958_v2Cicer arietinumexon
Ca_08540.1.exon8Ca_08540.1.exon8_ICC4958_v2Cicer arietinumexon
Ca_08540.1.exon7Ca_08540.1.exon7_ICC4958_v2Cicer arietinumexon
Ca_08540.1.exon6Ca_08540.1.exon6_ICC4958_v2Cicer arietinumexon
Ca_08540.1.exon5Ca_08540.1.exon5_ICC4958_v2Cicer arietinumexon
Ca_08540.1.exon4Ca_08540.1.exon4_ICC4958_v2Cicer arietinumexon
Ca_08540.1.exon3Ca_08540.1.exon3_ICC4958_v2Cicer arietinumexon
Ca_08540.1.exon2Ca_08540.1.exon2_ICC4958_v2Cicer arietinumexon
Ca_08540.1.exon1Ca_08540.1.exon1_ICC4958_v2Cicer arietinumexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ca_08540.1_ICC4958_v2Ca_08540.1_ICC4958_v2Cicer arietinumpolypeptide


Homology
[Close]
BLAST of Ca_08540.1 vs. DB:Swiss
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta OX=13708 PE=2 SV=1)

HSP 1 Score: 1010.75 bits (2612), Expect = 0.000e+0
Identity = 483/577 (83.71%), Postives = 526/577 (91.16%), Query Frame = 1 
Query:   25 PTTSFSATRGG--DSSGFFIPTRTTRFTKTHSHKARVRSSLDSNVSDMSINAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADNNLLVKDHTHTFVNKGGQIGELDFRFPVGAPLHGIRAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGALREIRNLDSISFSDWFMSKGGTRTSIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDIYLSGPIQKYITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSMSKATAKKIVEADAYVAACDVPGIKRLIPSEWREKEFFNNIYELVGVPVVTVQLRYNGWVTELQNIEMSRQLRKATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVAKQVISLFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRQTSAYICDAGEELVALRKELVA-QLKDDIKFTNTKDELSLV 1746
            P TS +  R     +  F    R+ + T+    KA VRS LD +VSDM  NAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESR+FIGGKVGSFVDK+GNHIEMGLHVFFGCYNNLFRL+KKVGA+ NLLVKDHTHTFVN+GG++GELDFRFPVGAPLHGI AFLTTNQLKTYDKARNAVALALSPVVRALVDPDGA+ +IRNLD+ISFS+WFMSKGGTRTSIQ+MWDPVAYALGFIDCDNISARCMLTIF+LFATKTEASLLRMLKGSPD+YLSGPI+ YI ++GGRFHLRWGCRE+LY+KSA+G TYVTGL+MSKAT K+IV+AD Y+AACDVPGIKRL+PS WRE EFF+NIY+LVGVPVVTVQLRYNGWVTELQ++E SRQLR+A GLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRV+KQV++LFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFL+GSYTKQDYIDSMEGATLSGRQ SA+ICDAGEEL ALRK+L A Q  D I      DE+SLV
Sbjct:   15 PATSAAGARTSFRTTDTFLRYRRSRQLTRLKVRKAVVRSDLDRDVSDMRTNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKQGNHIEMGLHVFFGCYNNLFRLLKKVGAEKNLLVKDHTHTFVNRGGELGELDFRFPVGAPLHGINAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGAMTQIRNLDNISFSEWFMSKGGTRTSIQRMWDPVAYALGFIDCDNISARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIRDYIIEKGGRFHLRWGCREILYEKSANGETYVTGLAMSKATQKQIVKADVYIAACDVPGIKRLLPSNWREWEFFDNIYKLVGVPVVTVQLRYNGWVTELQDVERSRQLRQAAGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVSKQVLALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAFICDAGEELAALRKQLAAIQSIDSIGV----DEMSLV 587
[Close]
BLAST of Ca_08540.1 vs. DB:Swiss
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum OX=4072 GN=ZDS PE=1 SV=1)

HSP 1 Score: 1008.44 bits (2606), Expect = 0.000e+0
Identity = 482/584 (82.53%), Postives = 531/584 (90.92%), Query Frame = 1 
Query:    7 ASLIHCPTTSFSATR---GGDSSGFFIPTRTTRFTKTHSHKARVRSSLDSNVSDMSINAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADNNLLVKDHTHTFVNKGGQIGELDFRFPVGAPLHGIRAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGALREIRNLDSISFSDWFMSKGGTRTSIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDIYLSGPIQKYITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSMSKATAKKIVEADAYVAACDVPGIKRLIPSEWREKEFFNNIYELVGVPVVTVQLRYNGWVTELQNIEMSRQLRKATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVAKQVISLFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRQTSAYICDAGEELVALRKEL-VAQLKDDIKFTNTKDELSLV 1746
            ++ + CP TS S  +      S+GF          +  + K+ +R+ L+S VSDMS NAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESR+FIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGA+ NLLVK+HTHTFVNKGG+IGELDFRFPVGAPLHGI AFL+TNQLKTYDKARNAVALALSPVVRALVDPDGAL++IR+LDS+SFSDWFMSKGGTR SIQ+MWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPD+YLSGPI+KYI D+GGRFHLRWGCREVLY+ S+DGS YV+GL+MSKAT KKIV+ADAYVAAC VPGIKRL+P +WRE EFF NIY+L+GVPVVTVQLRYNGWVTELQ++E SRQ ++ATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEII RV+KQV++LFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPV+NFFL+GSYTKQDYIDSMEGATLSGRQ SAYICDAGE+L+ALRK++  A+L +  K  +  DELSLV
Sbjct:    5 SAYLCCPATSASLKKRVFPDGSAGFLFFGGRRLSNRLVTPKSVIRADLNSMVSDMSTNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGAEKNLLVKEHTHTFVNKGGEIGELDFRFPVGAPLHGINAFLSTNQLKTYDKARNAVALALSPVVRALVDPDGALQQIRDLDSVSFSDWFMSKGGTRASIQRMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIKKYIIDKGGRFHLRWGCREVLYETSSDGSMYVSGLAMSKATQKKIVKADAYVAACVVPGIKRLVPQKWRELEFFGNIYKLIGVPVVTVQLRYNGWVTELQDLERSRQSKRATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIIRRVSKQVLALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYICDAGEQLLALRKKIAAAELNEISKGVSLSDELSLV 588
[Close]
BLAST of Ca_08540.1 vs. DB:Swiss
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum OX=4081 GN=ZDS PE=2 SV=1)

HSP 1 Score: 1001.12 bits (2587), Expect = 0.000e+0
Identity = 473/584 (80.99%), Postives = 530/584 (90.75%), Query Frame = 1 
Query:    7 ASLIHCPTTSFSATRG---GDSSGFFIPTRTTRFTKTHSHKARVRSSLDSNVSDMSINAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADNNLLVKDHTHTFVNKGGQIGELDFRFPVGAPLHGIRAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGALREIRNLDSISFSDWFMSKGGTRTSIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDIYLSGPIQKYITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSMSKATAKKIVEADAYVAACDVPGIKRLIPSEWREKEFFNNIYELVGVPVVTVQLRYNGWVTELQNIEMSRQLRKATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVAKQVISLFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRQTSAYICDAGEELVALRKEL-VAQLKDDIKFTNTKDELSLV 1746
            ++ + CP TS +  +      S GF +   T    +  + K+ +R+ LDS VSDMS NAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESR+FIGGKVGSFVD+RGNHIEMGLHVFFGCYNNLFRL+KKVGA+ NLLVK+HTHTFVNKGG+IGELDFRFPVGAPLHGI AFL+TNQLK YDKARNAVALALSPVVRALVDPDGAL++IR+LD++SFS+WF+SKGGTR SIQ+MWDPVAYALGFIDCDN+SARCMLTIFALFATKTEASLLRMLKGSPD+YLSGPI+KYI D+GGRFHLRWGCREVLY+ S+DGS YV+GL+MSKAT KKIV+ADAYVAACDVPGIKRL+P +WRE EFF+NIY+LVGVPVVTVQLRYNGWVTELQ++E SRQL++A GLDNLLYTPDADFSCFADLALASP+DYYIEGQGSLLQCVLTPGDPYMPL N+EII RV KQV++LFPSSQGLEVTWSSV+KIGQSLYREGPGKDPFRPDQKTPV+NFFL+GSYTKQDYIDSMEGATLSGRQ SAYIC+ GE+L+ALRK++  A+L D  K  +  DELSLV
Sbjct:    5 SAYLSCPATSATGKKHVFPNGSPGFLVFGGTRLSNRLVTRKSVIRADLDSMVSDMSTNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLLKKVGAEKNLLVKEHTHTFVNKGGEIGELDFRFPVGAPLHGINAFLSTNQLKIYDKARNAVALALSPVVRALVDPDGALQQIRDLDNVSFSEWFLSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIKKYIMDKGGRFHLRWGCREVLYETSSDGSMYVSGLAMSKATQKKIVKADAYVAACDVPGIKRLVPQKWRELEFFDNIYKLVGVPVVTVQLRYNGWVTELQDLERSRQLKRAAGLDNLLYTPDADFSCFADLALASPDDYYIEGQGSLLQCVLTPGDPYMPLSNDEIIKRVTKQVLALFPSSQGLEVTWSSVLKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYICNVGEQLMALRKKITAAELNDISKGVSLSDELSLV 588
[Close]
BLAST of Ca_08540.1 vs. DB:Swiss
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus OX=39639 GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 988.408 bits (2554), Expect = 0.000e+0
Identity = 466/565 (82.48%), Postives = 516/565 (91.33%), Query Frame = 1 
Query:   61 SSGFFIPTRTTRF-TKTHSHKARVRSSLDSNVSDMSINAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADNNLLVKDHTHTFVNKGGQIGELDFRFPVGAPLHGIRAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGALREIRNLDSISFSDWFMSKGGTRTSIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDIYLSGPIQKYITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSMSKATAKKIVEADAYVAACDVPGIKRLIPSEWREKEFFNNIYELVGVPVVTVQLRYNGWVTELQNIEMSRQLRKATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVAKQVISLFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRQTSAYICDAGEELVALRKELVAQLKDDI--KFTNTKDELSLV 1746
            SS F +  +  +  T   S    +RS+LD+ VSDMS+NAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESR FIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGAD NLLVKDHTHTFVN+GG+IGELDFR P+GAPLHGIRAFLTTNQLK YDKARNAVALALSPVVRAL+DP+GA+++IRNLD+ISFSDWF+SKGGTR SIQ+MWDPVAYALGFIDCDNISARCMLTIF+LFATKTEASLLRMLKGSPD+YLSGPI+KYITD+GGRFHLRWGCRE+LYD+ ++G TY+TG++MSKAT KK+V+AD YVAACDVPGIKRLIPSEWRE + F+NIY+LVGVPVVTVQLRYNGWVTE+Q++E SRQLR A GLDNLLYTPDADFSCF+DLAL+SPEDYYIEGQGSL+Q VLTPGDPYMPLPN+ II RV KQV+ LFPSSQGLEV WSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFL+GSYTKQDYIDSMEGATLSGRQ +AYIC AGE+L ALRK++ A   + +  K +N  DELSLV
Sbjct:   10 SSSFGVGGKKVKMNTMIRSKLFSIRSALDTKVSDMSVNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRQFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADENLLVKDHTHTFVNRGGEIGELDFRLPMGAPLHGIRAFLTTNQLKPYDKARNAVALALSPVVRALIDPNGAMQDIRNLDNISFSDWFLSKGGTRMSIQRMWDPVAYALGFIDCDNISARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLRWGCREILYDELSNGDTYITGIAMSKATNKKLVKADVYVAACDVPGIKRLIPSEWREWDLFDNIYKLVGVPVVTVQLRYNGWVTEMQDLEKSRQLRAAVGLDNLLYTPDADFSCFSDLALSSPEDYYIEGQGSLIQAVLTPGDPYMPLPNDAIIERVRKQVLDLFPSSQGLEVLWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQAAAYICSAGEDLAALRKKIAADHPEQLINKDSNVSDELSLV 574
[Close]
BLAST of Ca_08540.1 vs. DB:Swiss
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana OX=3702 GN=ZDS1 PE=1 SV=3)

HSP 1 Score: 969.533 bits (2505), Expect = 0.000e+0
Identity = 459/562 (81.67%), Postives = 504/562 (89.68%), Query Frame = 1 
Query:   61 SSGFFIPTRTTRFTKTHSHKARVRSSLDSNVSDMSINAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADNNLLVKDHTHTFVNKGGQIGELDFRFPVGAPLHGIRAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGALREIRNLDSISFSDWFMSKGGTRTSIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDIYLSGPIQKYITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSMSKATAKKIVEADAYVAACDVPGIKRLIPSEWREKEFFNNIYELVGVPVVTVQLRYNGWVTELQNIEMSRQLRKATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVAKQVISLFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRQTSAYICDAGEELVALRKELVAQLKDDIKFTNTKDELSLV 1746
            SS  F  T +       S +  V SSLDS+VSDMS+NAPKGLFPPEP  Y+GPKLKVAIIGAGLAGMSTAVELLDQGHEVDIY+SR+FIGGKVGSFVD+RGNHIEMGLHVFFGCYNNLFRLMKKVGA+ NLLVKDHTHTF+NK G IGELDFRFPVGAP+HGIRAFL TNQLK YDK RN++ALALSPVV+ALVDPDGA+R+IRNLDSISFSDWF+SKGGTR SIQ+MWDPVAYALGFIDCDN+SARCMLTIF+LFATKTEASLLRMLKGSPD+YLSGPI++YITDRGGR HLRWGCRE+LYDKSADG TYVTGL++SKAT KKIV+AD YVAACDVPGIKRL+P EWRE  FFN+IYEL GVPVVTVQLRYNGWVTELQ+IE++RQL++A GLDNLLYTPDADFSCFADLALASP DYYIEGQG+LLQCVLTPGDPYM +PN++II +VA QV  LFPSS+GLEVTWSSVVKI QSLYRE PGKDPFRPDQKTP+KNFFL+GSYTKQDYIDSMEGATLSGRQ S+YICDAGEEL  L K+L +        T   DELSLV
Sbjct:    3 SSVVFAATGSLSVPPLKSRRFYVNSSLDSDVSDMSVNAPKGLFPPEPVPYKGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLMKKVGAEKNLLVKDHTHTFINKDGTIGELDFRFPVGAPIHGIRAFLVTNQLKPYDKLRNSLALALSPVVKALVDPDGAMRDIRNLDSISFSDWFLSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIKQYITDRGGRIHLRWGCREILYDKSADGETYVTGLAISKATNKKIVKADVYVAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVVTVQLRYNGWVTELQDIELARQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQVTELFPSSRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKLSSSA------TAVPDELSLV 558
[Close]
BLAST of Ca_08540.1 vs. DB:Swiss
Match: ZDS_ONCHC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Oncidium hybrid cultivar OX=141207 GN=ZDS PE=2 SV=1)

HSP 1 Score: 947.577 bits (2448), Expect = 0.000e+0
Identity = 450/581 (77.45%), Postives = 507/581 (87.26%), Query Frame = 1 
Query:    4 MASLIHCPTTSFSATRGGDSSGFFIPTRTTRFTKTHSHKARVRSSLDSNVSDMSINAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADNNLLVKDHTHTFVNKGGQIGELDFRFPVGAPLHGIRAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGALREIRNLDSISFSDWFMSKGGTRTSIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDIYLSGPIQKYITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSMSKATAKKIVEADAYVAACDVPGIKRLIPSEWREKEFFNNIYELVGVPVVTVQLRYNGWVTELQNIEMSRQLRKATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVAKQVISLFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRQTSAYICDAGEELVALRKELVAQLKDDIKFTNTKDELSLV 1746
            MAS   C +   +AT  G+  G+                 RV +SLD  VSDMS+NAPKGLFPPEP+ Y GPKL+VAIIG+GLAGMSTAVELLDQGH+VDIYESR FIGGKV SFVDK GNHIEMGLHVFFGCY+NLFRLMKKVGAD NLLVKDHTHTFVNKGG IGELDFRFPVGAP+HGIRAFL TNQLK YDKARNA+ALALSPVVRA+VDP+GAL++IRNLD +SFSDWF SKGGTRTSI+++WDPVAYA GFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPD+YLSGPI+KYI DRGGRFHLRWGCR++LYDK+  G  +VTGL+MSKAT KKIV+AD YVAACDVPGIK+LIP++WRE + F+N+++LVGVPV+TVQLRYNGWV+ELQ+IE SRQLR+A GLDNLLYTPDADFSCF+DLALASPEDYY EGQGSL+Q VLTPGDPYMPLPN+EI+ RV KQV+ LFPSSQGLE+ WSSVVKIGQSLYRE PGKDPFRPDQ+TPVKNFFL+GSYTKQDYIDSMEGATLSGR+ +AYIC AGEEL++LRK+L A    D+  +   + LSLV
Sbjct:    1 MASAACCSSAYVAATSFGNFKGY----------------RRVGASLDRKVSDMSVNAPKGLFPPEPDIYSGPKLRVAIIGSGLAGMSTAVELLDQGHQVDIYESRQFIGGKVASFVDKHGNHIEMGLHVFFGCYSNLFRLMKKVGADGNLLVKDHTHTFVNKGGDIGELDFRFPVGAPIHGIRAFLATNQLKPYDKARNALALALSPVVRAIVDPNGALQDIRNLDHVSFSDWFFSKGGTRTSIERVWDPVAYAPGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIKKYIIDRGGRFHLRWGCRQILYDKTDSGDAFVTGLAMSKATEKKIVKADVYVAACDVPGIKKLIPAQWREWDMFDNLFKLVGVPVITVQLRYNGWVSELQDIERSRQLRQAVGLDNLLYTPDADFSCFSDLALASPEDYYKEGQGSLIQAVLTPGDPYMPLPNDEIVKRVQKQVLDLFPSSQGLEILWSSVVKIGQSLYREAPGKDPFRPDQETPVKNFFLAGSYTKQDYIDSMEGATLSGRRAAAYICGAGEELLSLRKKLAADEAHDL--SEASNSLSLV 563
[Close]
BLAST of Ca_08540.1 vs. DB:Swiss
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays OX=4577 GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 936.406 bits (2419), Expect = 0.000e+0
Identity = 438/502 (87.25%), Postives = 476/502 (94.82%), Query Frame = 1 
Query:  184 LFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADNNLLVKDHTHTFVNKGGQIGELDFRFPVGAPLHGIRAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGALREIRNLDSISFSDWFMSKGGTRTSIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDIYLSGPIQKYITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSMSKATAKKIVEADAYVAACDVPGIKRLIPSEWREKEFFNNIYELVGVPVVTVQLRYNGWVTELQNIEMSRQLRKATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVAKQVISLFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRQTSAYICDAGEELVALRKELV 1689
            LFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVD+YESR FIGGKVGSFVD++GNHIEMGLHVFFGCY+NLFRLMKKVGADNNLLVK+HTHTFVNKGG IGELDFRFPVGAPLHGI+AFL TNQLK YDKARNAVALALSPVVRALVDPDGAL+++R+LD ISFSDWFMSKGGTR SI +MWDPV YALGFIDCDNISARCMLTIF LFATKTEASLLRMLKGSPD+YLSGPI+KYITDRGGRFHLRWGCREVLY+KS DG TYV GL ++KAT+++I++ADAYVAACDVPGIKRL+PSEWRE E F+NIY+L GVPVVTVQLRYNGWVTELQ++E SRQL++A GLDNLLYT DADFSCF+DLAL+SP DYYIEGQGSL+Q VLTPGDPYMPLPNEEIIS+V KQV+ LFPSS+GLEVTWSSVVKIGQSLYRE PG DPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGR+TSAYIC AGEEL+ALRK+L+
Sbjct:   52 LFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDLYESRPFIGGKVGSFVDRQGNHIEMGLHVFFGCYSNLFRLMKKVGADNNLLVKEHTHTFVNKGGTIGELDFRFPVGAPLHGIQAFLRTNQLKVYDKARNAVALALSPVVRALVDPDGALQQVRDLDDISFSDWFMSKGGTRESITRMWDPVRYALGFIDCDNISARCMLTIFTLFATKTEASLLRMLKGSPDVYLSGPIKKYITDRGGRFHLRWGCREVLYEKSPDGETYVKGLLLTKATSREIIKADAYVAACDVPGIKRLLPSEWREWEMFDNIYKLDGVPVVTVQLRYNGWVTELQDLEKSRQLQRAVGLDNLLYTADADFSCFSDLALSSPADYYIEGQGSLIQAVLTPGDPYMPLPNEEIISKVQKQVVELFPSSRGLEVTWSSVVKIGQSLYREAPGNDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRRTSAYICGAGEELLALRKKLL 553
[Close]
BLAST of Ca_08540.1 vs. DB:Swiss
Match: ZDS_SYNY3 (Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=crtQ PE=3 SV=1)

HSP 1 Score: 660.218 bits (1702), Expect = 0.000e+0
Identity = 314/475 (66.11%), Postives = 377/475 (79.37%), Query Frame = 1 
Query:  223 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADNNLLVKDHTHTFVNKGGQIGELDFRFPVGAPLHGIRAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGALREIRNLDSISFSDWFMSKGGTRTSIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDIYLSGPIQKYITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSMSKATAKKIVEADAYVAACDVPGIKRLIPSEWREK-EFFNNIYELVGVPVVTVQLRYNGWVTELQNIEMSRQLRKATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVAKQVISLFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRQTSAYI 1644
            ++VAI+GAGLAGM+TAVEL+D GHEV++YE+RSFIGGKVGS+VD  GNHIEMGLHVFFGCY NLF LM+KVGA  NL +K+HTHTFVN+GG+IGELDFRF  GAP +G++AF TT+QL T DK  N++ALA SP+VR LVD DGA++ IR+LD ISF++WF+SKGG   S++KMWDP+AYALGFID +NISARCMLTIF LFA +TEAS+LRML+GSP  YL  PIQ+Y+  RG +F+ R   +E+   K  DG T VTGL ++     K V ADAYVAACDVPGIK L+P  WR + +FFN IY L  VPV TVQLR++GWVTE+ +    +QL +A GLDNLLYT DA+FSCFADLAL SP DYY  G+GSLLQ VLTPGDP+M   NE I  RV KQV +LFPS+  L +TW SV+K+ QSLYRE PG D FRP Q TP+ NFFL+GSYT+QDYIDSMEGATLSGRQ +  I
Sbjct:    1 MRVAIVGAGLAGMATAVELVDAGHEVELYEARSFIGGKVGSWVDGDGNHIEMGLHVFFGCYYNLFNLMEKVGAKQNLRLKEHTHTFVNQGGRIGELDFRFLTGAPFNGLKAFFTTSQLDTKDKIANSIALATSPIVRGLVDFDGAMKTIRDLDRISFAEWFLSKGGNEGSLKKMWDPIAYALGFIDTENISARCMLTIFQLFAARTEASVLRMLEGSPQEYLHKPIQEYLEQRGTKFYTRHKVKEI-KTKVTDGETRVTGLIINDGVETKTVTADAYVAACDVPGIKNLLPENWRTQWDFFNKIYYLDTVPVATVQLRFDGWVTEMNDPAKRKQLEQAFGLDNLLYTSDAEFSCFADLALTSPADYYRPGEGSLLQLVLTPGDPFMKESNEAIAYRVLKQVKALFPSAADLNMTWYSVIKLAQSLYREAPGMDLFRPSQATPIANFFLAGSYTQQDYIDSMEGATLSGRQAAQAI 474
[Close]
BLAST of Ca_08540.1 vs. DB:Swiss
Match: ZDS_NOSS1 (Zeta-carotene desaturase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=crtQ PE=3 SV=2)

HSP 1 Score: 639.802 bits (1649), Expect = 0.000e+0
Identity = 298/476 (62.61%), Postives = 375/476 (78.78%), Query Frame = 1 
Query:  223 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADNNLLVKDHTHTFVNKGGQIGELDFRFPVGAPLHGIRAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGALREIRNLDSISFSDWFMSKGGTRTSIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDIYLSGPIQKYITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSMSKATAKKIVEADAYVAACDVPGIKRLIPSEWREKEFFNNIYELVGVPVVTVQLRYNGWVTELQNIEMSRQLRKATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVAKQVISLFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRQTSAYICD 1650
            ++VAI+GAGLAG++TA++L D G EV I+ESR F+GGKVGS++D  GNH+EMGLHVFFGCY  LF LM KVGA ++L +K+HTHTFVNKGG+ G LDFRF  GAP +G++AF TT+QL   DK +NA+AL  SP+VR LVD +GA++ IRNLD ISF+DWF S GG+  SI++MW+P+AYALGFIDC+NISARCMLTIF  FA ++EAS+LRML+GSPD YL  PI +Y+  RG + + R   RE+ Y   A+G T VTG+ ++K    + + ADAYV ACD+PGI+R++P EWR+   F+NIY+L  VPV TVQ+R++GWVTELQ+    +QL++A GLDNLLYT DADFSCFADLAL SP DYY +GQGSLLQ VLTPGDP++   NE I   V KQV  LFPSS+ L +TW SVVK+ QSLYRE PG D +RP+QKTP+ NFFL+GSYT+QDYIDSMEGAT+SGR+ +  I D
Sbjct:    1 MRVAIVGAGLAGLATAIDLADAGCEVQIFESRPFVGGKVGSWIDGDGNHVEMGLHVFFGCYYQLFELMNKVGAFSHLRLKEHTHTFVNKGGRTGALDFRFFTGAPFNGLKAFFTTSQLSLQDKLQNAIALGTSPIVRGLVDFEGAMKTIRNLDKISFADWFRSHGGSNGSIKRMWNPIAYALGFIDCENISARCMLTIFQFFAVRSEASVLRMLEGSPDEYLHQPILRYLEARGTKVYTRRQVREIKY-AEAEGQTRVTGIVVAKGDEVEEITADAYVCACDIPGIQRVLPQEWRKWSEFDNIYKLDAVPVATVQMRFDGWVTELQDENKRKQLKEAAGLDNLLYTADADFSCFADLALTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVYELFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKVILD 475
[Close]
BLAST of Ca_08540.1 vs. DB:Swiss
Match: ZDS_SYNE7 (Probable zeta-carotene desaturase OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=zds PE=3 SV=1)

HSP 1 Score: 627.476 bits (1617), Expect = 0.000e+0
Identity = 302/477 (63.31%), Postives = 378/477 (79.25%), Query Frame = 1 
Query:  223 LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADNNLLVKDHTHTFVNKGGQIGELDFRFPVGAPLHGIRAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGALREIRNLDSISFSDWFMSKGGTRTSIQKMWDPVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDIYLSGPIQKYITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSMSKATAKKIVEADAYVAACDVPGIKRLIPSEWREKEFFNNIYELVGVPVVTVQLRYNGWVTELQNIEMSRQLRKATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQCVLTPGDPYMPLPNEEIISRVAKQVISLFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRQTSAYICDA 1653
            ++VAI+GAGLAG++ A++L+D GH+V IY+SR F+GGKVGS++D  GNHIEMGLHVFF  Y NLF LM+KVGA  NLL K HTHTF+NKGG++GELDFRFP+GAP +G++AF TT+QL   DK +NA+AL  SP+VR ++D +GA++ IR LD ISF+DWF S GG+  S+++MW+P+AYALGFID +NISARCMLT+F +FA KTEAS L +L GSP  YL  PI  YI  RG   HLR   RE+ Y ++ +G T VTGL ++   A + VEAD Y+AACDVPGI+RL+P  WR+   F+NIY+L  VPV TVQLR++GWVTEL + E   QL  ATGLDNLLYT DADFSCF DLAL+SP+DYY +GQGSLLQCVLTPGDP++ + NE+I   V KQV  LFPSS+ L +TWS+VVK+ QSLYRE PG DPFRPDQKTP+ NFFL+GSYT+QDYIDSMEGAT+SGR+ +  + +A
Sbjct:    1 MRVAIVGAGLAGLAAAIDLVDAGHQVAIYDSRPFVGGKVGSWIDADGNHIEMGLHVFFFNYANLFALMRKVGAFENLLPKAHTHTFINKGGEVGELDFRFPIGAPFNGLKAFFTTSQLTWLDKLQNALALGTSPLVRGILDYEGAMKIIRALDRISFADWFRSHGGSEGSLKRMWNPIAYALGFIDTENISARCMLTVFQMFAAKTEASKLNLLAGSPAEYLHKPILDYIQARGATLHLRRRVREIEYTET-NGQTVVTGLQIADGDAVERVEADVYLAACDVPGIQRLLPEAWRKWSEFDNIYKLDAVPVATVQLRFDGWVTELGDREKRHQLDHATGLDNLLYTADADFSCFTDLALSSPKDYYRKGQGSLLQCVLTPGDPFIAMKNEDIAQHVLKQVHELFPSSRDLNMTWSNVVKLAQSLYREAPGMDPFRPDQKTPIANFFLAGSYTQQDYIDSMEGATISGRRAAKAMLEA 476
The following BLAST results are available for this feature:
BLAST of Ca_08540.1 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ZDS_TARER0.000e+083.71Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_CAPAN0.000e+082.53Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_SOLLC0.000e+080.99Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_NARPS0.000e+082.48Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_ARATH0.000e+081.67Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_ONCHC0.000e+077.45Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_MAIZE0.000e+087.25Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_SYNY30.000e+066.11Zeta-carotene desaturase OS=Synechocystis sp. (str... [more]
ZDS_NOSS10.000e+062.61Zeta-carotene desaturase OS=Nostoc sp. (strain PCC... [more]
ZDS_SYNE70.000e+063.31Probable zeta-carotene desaturase OS=Synechococcus... [more]
back to top
InterPro
Analysis Name: InterProScan: C. arietinum ICC 4958, v2.0 (desi)
Date Performed: 2019-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00419ADXRDTASEcoord: 99..112
score: 34.18
coord: 76..98
score: 43.17
NoneNo IPR availablePANTHERPTHR42923:SF28coord: 22..582
NoneNo IPR availablePANTHERPTHR42923FAMILY NOT NAMEDcoord: 22..582
IPR014103Zeta-carotene desaturaseTIGRFAMTIGR02732TIGR02732coord: 76..549
e-value: 1.0E-271
score: 899.7
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 73..363
e-value: 7.5E-21
score: 76.6
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 74..550
IPR002937Amine oxidasePFAMPF01593Amino_oxidasecoord: 84..548
e-value: 5.1E-66
score: 223.8

Sequences
The following sequences are available for this feature:

mRNA sequence

>Ca_08540.1_ICC4958_v2 ID=Ca_08540.1_ICC4958_v2; Name=Ca_08540.1; organism=Cicer arietinum; type=mRNA; length=5135bp
ATGATGGCTTCTCTGATTCATTGTCCTACAACTTCCTTCTCCGCAACTCG
AGGAGGAGACTCCTCTGGCTTCTTTATTCCCACCCGTACTACCCGTTTCA
CCAAAACCCATAGCCACAAGGCTCGAGTTCGTTCTTCTTTGGATTCTAAT
GTTTCTGATATGAGTATCAACGGTTAGTACTCGCTTTTACTACTTGTTTC
TAATTCTATTCTTTATATTGATTATACTTATGCTGGAATGGAAAATTCCC
CTAAATTATCTGGATTTCAAATTCAATTTTCAGATGCTACTTTTCCCTTC
AAACTGTCTTTCTTTTTCTTTATATTTATTTGTAATTTTGGGTGTGTTGC
ACGAATTAGATGATTAAAAGAATAGCATGAAAAGTTAGCCAATTTCTCAG
CATCACAAGTTTTGGTTGCATTTTTATCTAGGGCATGTTTGCACTTAGTT
ATTTGAACTTATCTACTACTTGTGAGACTCTTTGGGAGAGCTTGTGGAAA
TAACACGTCTGTTAGCTGTTTTTTAGTTATTTCGATAAGCTTGTCATGAT
AGTTTTTGAAAACAACTTAATTTGACTAACCGTTGATATTCTAAATAAGC
ACTTATATGATAAACGTTTATGATATAAACACTTAAATGATAAATGTTTA
TGATATAAACACTTAATTAAGTTGTTTATCCAAATAGTGATATTCTATAT
ACCTACACAAAGAATTGTGTCAAGCTTAAGGTGTATTCTTGTGCAATGTT
TAATTTTGACATGAATTGTTAGTGGTTGTTTGTGGATGTTGCTGTATGAG
AATTGGTTTCTGCTGTGGGATTATGTATCTGATTGTAGATATTAACATTT
ACCAAGTCTATGTAACATTTCTTAAGCTGAAAGTCTGACTGACGAAATGT
TTCACTTTTACCTGCCAGCACCAAAGGGACTGTTTCCTCCAGAGCCCGAA
CATTATCGAGGACCGAAGCTGAAAGTTGCTATCATTGGAGCTGGGCTTGC
AGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGGCACGAGGTTTTGC
TCCTTCTCTGTCTGTCTTTATCTTAATGGCTTGCTCATATCATAATATTT
TGAAATTGGGTGTTTTTATGATGCATATAATGAAGTTACCTTTTGAAGAA
AACTGAAGTGAATCTTTGTTGCGTTTTCTTTTGGAATCATGGTGTTGAAT
GTGTCGGGATATCCGGATAATTGATTGTATTTCATTATCTTTTCTTTTTC
AATATTCTCCTATTCAGGTGGATATATATGAGTCAAGATCTTTTATTGGT
GGCAAAGTTGGTTCTTTTGTTGATAAACGTGGAAATCATATTGAAATGGG
ATTACACGTTTTCTTTGGTTGCTACAACAATCTTTTCCGATTAATGAAAA
AGGTAAAGAATTTTTACTTGCAGCCCAAATGCAAGTCACTTTTCAGTTGT
ATTCTTCCTCCCTATTTTTGGGCAAACCTGTACTATTGACTTTCTTGCTC
TGTCCATTTTTATCATATCAATTTATAATTGGATTACTTTTTCTTCATCA
TGCTGGGGCTAGGTGGGTGCAGATAACAATCTGCTTGTGAAGGATCACAC
TCACACTTTTGTAAACAAAGGGGGTCAAATTGGAGGTATGTTATGAGCTG
CAAATTGCAATAACTTGCTTCAATTTGTTCATTATTTTCTTGTTGATTTT
TCCTATTCATGAGAGCACTATTTGTATGAATAGATAATAGTTGCATAATG
CATTGTTCTTAACTTAGCTTTACAGTGCAGAACTAGATTTTCGCTTTCCG
GTTGGGGCACCATTACATGGGATAAGAGCATTTTTGACCACAAATCAGCT
TAAGGTTATTGCATCAGAATAAAAACTATAGTTGCGTGTACGCGTTTCTG
CCTCCATGGGGCTATCATTGCACCTAACTTTACATATTTTTTATGTATCA
GACTTATGATAAGGCTAGAAATGCTGTGGCTCTCGCACTGAGTCCAGTTG
TCAGAGCTCTTGTTGATCCGGATGGTGCACTGAGGGAGATAAGGAATTTG
GATAGTGTAAGAGGATGTTATTTTCTTGTTATTTCTGGTCCCTTTCCAAA
TGATTTTTCCTGATTATTTGTCCCTCTAGCTTTATATTTCGACTACTACA
TTTTCCCATTGCACATGTGCACCCACATATGCCCATGCACATGCACTCAC
ATACAATGCAGCAAGTAGAAATGGATCTTTTTCGGCCTTGGCTGTATGCC
AAATCTAAGCCTGTTGTTTCACTTTGTACCGTATACCAAATCTTCCGTCT
TTTAACTATTAAATGCATTTCTTGCAGATTAGCTTTTCAGACTGGTTTAT
GTCCAAAGGTGGCACGCGGACAAGTATTCAAAAAATGTGGGATCCAGTTG
CCTATGCCCTTGGGTTTATTGACTGTGATAATATCAGTGCCCGTTGCATG
CTAACCATATTTGCACTGTTTGCCACGAAGACCGAGGCTTCCCTTTTGCG
GATGCTGAAGGGTTCACCAGACATTTATTTGAGTGGCCCTATCCAGAAGT
ACATCACAGATAGAGGGGGAAGGTATAATCCGGACGCAAGAATATTACCA
TCATCATAACTTTCCAAATTTCTACCTATATAGATTCTCATTCATTGCTG
GAACAGGTTCCATCTTAGGTGGGGATGCAGAGAAGTACTTTATGATAAAT
CTGCTGATGGGAGCACTTATGTTACCGGACTTTCCATGTCAAAGGTGATA
TGCTTTATCTGTTCTATTTAAAATATTTACATGCTTGGTTAGATTTCAAT
TAACATCCCAAATTCTTGCTATTTATTTTCTTAGGCTACTGCCAAGAAAA
TTGTGGAAGCTGATGCTTATGTTGCTGGTTAGTAGTTTACTTGCCTTGGT
TTTTGTATTGATCTCATATTACTGCAACAATCTACAATGCCTTAACCTAG
CATTGACTTGATATCAGCCTGTGATGTCCCTGGAATCAAAAGATTAATCC
CATCAGAGTGGAGGGAAAAGGAGTTTTTCAATAACATATACGAACTGGTT
GGAGTTCCTGTCGTCACAGTGCAACTCAGATACAATGGTTGGGTTACAGA
ATTGCAGAATATAGAAATGTCAAGGTAATTCTAAAATATTTAGGCTTCAT
ATAGAAATGATAAAATTAGATACTTTGTTTCAAAGACAAGGTAAGATATA
TTTTTCTTTGATCATTATTGTTTAATTTCTTTACGAACCCTTACATTCTG
GATGACAGGCAACTGAGGAAAGCTACTGGGTTAGATAACCTTCTCTATAC
TCCCGATGCAGATTTTTCTTGCTTTGCAGACCTTGCACTTGCATCGCCTG
AAGATTATTACATTGAGGGGCAAGGATCATTGCTCCAGTAAGTGTCGTTT
ATGTTGATTTGTTTGAGAATTAATTCCATGAGAGACTTTTGTGAGTTTCT
TGGGTGTTTATCACTCAGTATACTGATATTTATATACATGGGATAATCAA
TAGAACTTACTTATATTTACGATGATTGGACTATTTTCTACAATCATTAT
GTTCACCATGCTTCACAAACTACTATTGTTTCCAAAGCTATGTTATCTAC
TGTTTTCATTTCCAACATTTTATGCATATCACCCATGACTAAAGTATGTT
ATGCAATGCTTGTCCAAAAAAAAGTATGTTATGCAATGGATGAAACTTCA
CCATCATTTTATCATGCAACTTGTAGTTAATGTGCTGCTAGTTTGGAAAC
CGTTTCCAAAAGCACTTATAGGAAAAGGAAAATTGTAATGATTTTGCAAT
GGCTATGAATCTTCTAAGTTATAACTTCTTGCATAAGTTAATTAGCTTAT
GCACCTCAACTTCTCCATGAGCATGTACAAATTATAAGGGCATTTTTGTA
AGTTAGGAACCTAATAGTTTCAATGGGACTATATATTCTAATGTTCCTCA
TACTTCATAAGTTACTATTGTTACATACAATTTACCAAAGCTATAAATTT
TAATAACTACCGTTATCATTTTCAACAATTAATACATAAATCATAGGTGA
CCATGTTAAGCAATGGTTGCATTGTCAGTCCAGCATATGTGAATGCACCA
GCTTTACTGTTTCTCCCCCCATTTCAAGTCCAACATATGTTCATATAATA
TTTAATTTTTGTTGACCTTCTAAGTATGTAATTTCTTTTCATCTGTCAGA
TGTGTTCTGACGCCAGGAGATCCATACATGCCCTTGCCAAATGAAGAAAT
TATTTCAAGGGTAGCAAAACAGGTAAGTTAAAAAATGTTTGGTACCTGTT
ATTCTTTTCATGTGCATCCTAAATTGATATAAAAAATTGTTGCCAGGTTA
TATCACTGTTCCCATCATCTCAAGGTTTAGAAGTGACTTGGTCATCTGTC
GTTAAAATTGGACAATCTCTGTACCGTGAGGGACCTGGTAAAGATCCATT
TAGACCTGACCAAAAGACACCAGTGAAGAATTTCTTTCTTTCTGGCTCTT
ACACAAAGCAGGTAAGTTCAAAATACCATGCACACTCTTGACTAACATTT
TAACTCCTGCTTGTCTTATCTGTAACTGCAAATTTGCAGCAGCCAATTTT
TTTGGGGCTGAAATATATGAGATCCTATAGAGGAGTCAATTTACTGGCAT
TTGGAAAAATATATAAGGATAAAATAAATATAGTATGCACCTTTCTGTCA
TAAGAGTTTGTATTAGTAGCCAGTAGGCACTGTTTTTACAATGCTTGTCT
TCATCCTAAAACAAACTCCACTAATATTCCACTTCTGTGGATAGAGCTTT
TTCAAATTTATCAAATGGTTTTAACCTGTCCTATTGACTTTGTGTTCAAC
CTTTTTATCCACCAACTTTACTTTCCAGTTGATGCCAACATTTTGAGGAG
CTCTTTCACTGATATTGCTGACTTTTATTGATTTTATCTAGTTTCCTGCT
GAAATATTTGATCTGTTCAGGATTACATAGACAGCATGGAAGGTGCAACC
TTATCCGGCCGGCAAACTTCGGCCTATATCTGTGATGCCGGGGAAGAATT
GGTGGCATTGCGGAAGGAGCTTGTTGCACAGCTTAAAGACGACATTAAAT
TTACAAATACTAAAGATGAATTGAGTCTAGTATGA
back to top

protein sequence of Ca_08540.1_ICC4958_v2

>Ca_08540.1_ICC4958_v2 ID=Ca_08540.1_ICC4958_v2; Name=Ca_08540.1_ICC4958_v2; organism=Cicer arietinum; type=polypeptide; length=582bp
MMASLIHCPTTSFSATRGGDSSGFFIPTRTTRFTKTHSHKARVRSSLDSN
VSDMSINAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGHEV
DIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVGADNN
LLVKDHTHTFVNKGGQIGELDFRFPVGAPLHGIRAFLTTNQLKTYDKARN
AVALALSPVVRALVDPDGALREIRNLDSISFSDWFMSKGGTRTSIQKMWD
PVAYALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDIYLSGPI
QKYITDRGGRFHLRWGCREVLYDKSADGSTYVTGLSMSKATAKKIVEADA
YVAACDVPGIKRLIPSEWREKEFFNNIYELVGVPVVTVQLRYNGWVTELQ
NIEMSRQLRKATGLDNLLYTPDADFSCFADLALASPEDYYIEGQGSLLQC
VLTPGDPYMPLPNEEIISRVAKQVISLFPSSQGLEVTWSSVVKIGQSLYR
EGPGKDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRQTSAYICD
AGEELVALRKELVAQLKDDIKFTNTKDELSLV
back to top

mRNA from alignment at Ca_LG_4:6781284..6786418-

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ca_08540.1_ICC4958_v2 ID=Ca_08540.1_ICC4958_v2; Name=Ca_08540.1; organism=Cicer arietinum; type=mRNA; length=5135bp; location=Sequence derived from: Ca_LG_4:6781284..6786418- (Cicer arietinum
ATGATGGCTTCTCTGATTCATTGTCCTACAACTTCCTTCTCCGCAACTCG
AGGAGGAGACTCCTCTGGCTTCTTTATTCCCACCCGTACTACCCGTTTCA
CCAAAACCCATAGCCACAAGGCTCGAGTTCGTTCTTCTTTGGATTCTAAT
GTTTCTGATATGAGTATCAACGGTTAGTACTCGCTTTTACTACTTGTTTC
TAATTCTATTCTTTATATTGATTATACTTATGCTGGAATGGAAAATTCCC
CTAAATTATCTGGATTTCAAATTCAATTTTCAGATGCTACTTTTCCCTTC
AAACTGTCTTTCTTTTTCTTTATATTTATTTGTAATTTTGGGTGTGTTGC
ACGAATTAGATGATTAAAAGAATAGCATGAAAAGTTAGCCAATTTCTCAG
CATCACAAGTTTTGGTTGCATTTTTATCTAGGGCATGTTTGCACTTAGTT
ATTTGAACTTATCTACTACTTGTGAGACTCTTTGGGAGAGCTTGTGGAAA
TAACACGTCTGTTAGCTGTTTTTTAGTTATTTCGATAAGCTTGTCATGAT
AGTTTTTGAAAACAACTTAATTTGACTAACCGTTGATATTCTAAATAAGC
ACTTATATGATAAACGTTTATGATATAAACACTTAAATGATAAATGTTTA
TGATATAAACACTTAATTAAGTTGTTTATCCAAATAGTGATATTCTATAT
ACCTACACAAAGAATTGTGTCAAGCTTAAGGTGTATTCTTGTGCAATGTT
TAATTTTGACATGAATTGTTAGTGGTTGTTTGTGGATGTTGCTGTATGAG
AATTGGTTTCTGCTGTGGGATTATGTATCTGATTGTAGATATTAACATTT
ACCAAGTCTATGTAACATTTCTTAAGCTGAAAGTCTGACTGACGAAATGT
TTCACTTTTACCTGCCAGCACCAAAGGGACTGTTTCCTCCAGAGCCCGAA
CATTATCGAGGACCGAAGCTGAAAGTTGCTATCATTGGAGCTGGGCTTGC
AGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGGCACGAGGTTTTGC
TCCTTCTCTGTCTGTCTTTATCTTAATGGCTTGCTCATATCATAATATTT
TGAAATTGGGTGTTTTTATGATGCATATAATGAAGTTACCTTTTGAAGAA
AACTGAAGTGAATCTTTGTTGCGTTTTCTTTTGGAATCATGGTGTTGAAT
GTGTCGGGATATCCGGATAATTGATTGTATTTCATTATCTTTTCTTTTTC
AATATTCTCCTATTCAGGTGGATATATATGAGTCAAGATCTTTTATTGGT
GGCAAAGTTGGTTCTTTTGTTGATAAACGTGGAAATCATATTGAAATGGG
ATTACACGTTTTCTTTGGTTGCTACAACAATCTTTTCCGATTAATGAAAA
AGGTAAAGAATTTTTACTTGCAGCCCAAATGCAAGTCACTTTTCAGTTGT
ATTCTTCCTCCCTATTTTTGGGCAAACCTGTACTATTGACTTTCTTGCTC
TGTCCATTTTTATCATATCAATTTATAATTGGATTACTTTTTCTTCATCA
TGCTGGGGCTAGGTGGGTGCAGATAACAATCTGCTTGTGAAGGATCACAC
TCACACTTTTGTAAACAAAGGGGGTCAAATTGGAGGTATGTTATGAGCTG
CAAATTGCAATAACTTGCTTCAATTTGTTCATTATTTTCTTGTTGATTTT
TCCTATTCATGAGAGCACTATTTGTATGAATAGATAATAGTTGCATAATG
CATTGTTCTTAACTTAGCTTTACAGTGCAGAACTAGATTTTCGCTTTCCG
GTTGGGGCACCATTACATGGGATAAGAGCATTTTTGACCACAAATCAGCT
TAAGGTTATTGCATCAGAATAAAAACTATAGTTGCGTGTACGCGTTTCTG
CCTCCATGGGGCTATCATTGCACCTAACTTTACATATTTTTTATGTATCA
GACTTATGATAAGGCTAGAAATGCTGTGGCTCTCGCACTGAGTCCAGTTG
TCAGAGCTCTTGTTGATCCGGATGGTGCACTGAGGGAGATAAGGAATTTG
GATAGTGTAAGAGGATGTTATTTTCTTGTTATTTCTGGTCCCTTTCCAAA
TGATTTTTCCTGATTATTTGTCCCTCTAGCTTTATATTTCGACTACTACA
TTTTCCCATTGCACATGTGCACCCACATATGCCCATGCACATGCACTCAC
ATACAATGCAGCAAGTAGAAATGGATCTTTTTCGGCCTTGGCTGTATGCC
AAATCTAAGCCTGTTGTTTCACTTTGTACCGTATACCAAATCTTCCGTCT
TTTAACTATTAAATGCATTTCTTGCAGATTAGCTTTTCAGACTGGTTTAT
GTCCAAAGGTGGCACGCGGACAAGTATTCAAAAAATGTGGGATCCAGTTG
CCTATGCCCTTGGGTTTATTGACTGTGATAATATCAGTGCCCGTTGCATG
CTAACCATATTTGCACTGTTTGCCACGAAGACCGAGGCTTCCCTTTTGCG
GATGCTGAAGGGTTCACCAGACATTTATTTGAGTGGCCCTATCCAGAAGT
ACATCACAGATAGAGGGGGAAGGTATAATCCGGACGCAAGAATATTACCA
TCATCATAACTTTCCAAATTTCTACCTATATAGATTCTCATTCATTGCTG
GAACAGGTTCCATCTTAGGTGGGGATGCAGAGAAGTACTTTATGATAAAT
CTGCTGATGGGAGCACTTATGTTACCGGACTTTCCATGTCAAAGGTGATA
TGCTTTATCTGTTCTATTTAAAATATTTACATGCTTGGTTAGATTTCAAT
TAACATCCCAAATTCTTGCTATTTATTTTCTTAGGCTACTGCCAAGAAAA
TTGTGGAAGCTGATGCTTATGTTGCTGGTTAGTAGTTTACTTGCCTTGGT
TTTTGTATTGATCTCATATTACTGCAACAATCTACAATGCCTTAACCTAG
CATTGACTTGATATCAGCCTGTGATGTCCCTGGAATCAAAAGATTAATCC
CATCAGAGTGGAGGGAAAAGGAGTTTTTCAATAACATATACGAACTGGTT
GGAGTTCCTGTCGTCACAGTGCAACTCAGATACAATGGTTGGGTTACAGA
ATTGCAGAATATAGAAATGTCAAGGTAATTCTAAAATATTTAGGCTTCAT
ATAGAAATGATAAAATTAGATACTTTGTTTCAAAGACAAGGTAAGATATA
TTTTTCTTTGATCATTATTGTTTAATTTCTTTACGAACCCTTACATTCTG
GATGACAGGCAACTGAGGAAAGCTACTGGGTTAGATAACCTTCTCTATAC
TCCCGATGCAGATTTTTCTTGCTTTGCAGACCTTGCACTTGCATCGCCTG
AAGATTATTACATTGAGGGGCAAGGATCATTGCTCCAGTAAGTGTCGTTT
ATGTTGATTTGTTTGAGAATTAATTCCATGAGAGACTTTTGTGAGTTTCT
TGGGTGTTTATCACTCAGTATACTGATATTTATATACATGGGATAATCAA
TAGAACTTACTTATATTTACGATGATTGGACTATTTTCTACAATCATTAT
GTTCACCATGCTTCACAAACTACTATTGTTTCCAAAGCTATGTTATCTAC
TGTTTTCATTTCCAACATTTTATGCATATCACCCATGACTAAAGTATGTT
ATGCAATGCTTGTCCAAAAAAAAGTATGTTATGCAATGGATGAAACTTCA
CCATCATTTTATCATGCAACTTGTAGTTAATGTGCTGCTAGTTTGGAAAC
CGTTTCCAAAAGCACTTATAGGAAAAGGAAAATTGTAATGATTTTGCAAT
GGCTATGAATCTTCTAAGTTATAACTTCTTGCATAAGTTAATTAGCTTAT
GCACCTCAACTTCTCCATGAGCATGTACAAATTATAAGGGCATTTTTGTA
AGTTAGGAACCTAATAGTTTCAATGGGACTATATATTCTAATGTTCCTCA
TACTTCATAAGTTACTATTGTTACATACAATTTACCAAAGCTATAAATTT
TAATAACTACCGTTATCATTTTCAACAATTAATACATAAATCATAGGTGA
CCATGTTAAGCAATGGTTGCATTGTCAGTCCAGCATATGTGAATGCACCA
GCTTTACTGTTTCTCCCCCCATTTCAAGTCCAACATATGTTCATATAATA
TTTAATTTTTGTTGACCTTCTAAGTATGTAATTTCTTTTCATCTGTCAGA
TGTGTTCTGACGCCAGGAGATCCATACATGCCCTTGCCAAATGAAGAAAT
TATTTCAAGGGTAGCAAAACAGGTAAGTTAAAAAATGTTTGGTACCTGTT
ATTCTTTTCATGTGCATCCTAAATTGATATAAAAAATTGTTGCCAGGTTA
TATCACTGTTCCCATCATCTCAAGGTTTAGAAGTGACTTGGTCATCTGTC
GTTAAAATTGGACAATCTCTGTACCGTGAGGGACCTGGTAAAGATCCATT
TAGACCTGACCAAAAGACACCAGTGAAGAATTTCTTTCTTTCTGGCTCTT
ACACAAAGCAGGTAAGTTCAAAATACCATGCACACTCTTGACTAACATTT
TAACTCCTGCTTGTCTTATCTGTAACTGCAAATTTGCAGCAGCCAATTTT
TTTGGGGCTGAAATATATGAGATCCTATAGAGGAGTCAATTTACTGGCAT
TTGGAAAAATATATAAGGATAAAATAAATATAGTATGCACCTTTCTGTCA
TAAGAGTTTGTATTAGTAGCCAGTAGGCACTGTTTTTACAATGCTTGTCT
TCATCCTAAAACAAACTCCACTAATATTCCACTTCTGTGGATAGAGCTTT
TTCAAATTTATCAAATGGTTTTAACCTGTCCTATTGACTTTGTGTTCAAC
CTTTTTATCCACCAACTTTACTTTCCAGTTGATGCCAACATTTTGAGGAG
CTCTTTCACTGATATTGCTGACTTTTATTGATTTTATCTAGTTTCCTGCT
GAAATATTTGATCTGTTCAGGATTACATAGACAGCATGGAAGGTGCAACC
TTATCCGGCCGGCAAACTTCGGCCTATATCTGTGATGCCGGGGAAGAATT
GGTGGCATTGCGGAAGGAGCTTGTTGCACAGCTTAAAGACGACATTAAAT
TTACAAATACTAAAGATGAATTGAGTCTAGTATGA
back to top

Coding sequence (CDS) from alignment at Ca_LG_4:6781284..6786418-

>Ca_08540.1_ICC4958_v2 ID=Ca_08540.1_ICC4958_v2; Name=Ca_08540.1; organism=Cicer arietinum; type=CDS; length=1749bp; location=Sequence derived from: Ca_LG_4:6781284..6786418- (Cicer arietinum
ATGATGGCTTCTCTGATTCATTGTCCTACAACTTCCTTCTCCGCAACTCG
AGGAGGAGACTCCTCTGGCTTCTTTATTCCCACCCGTACTACCCGTTTCA
CCAAAACCCATAGCCACAAGGCTCGAGTTCGTTCTTCTTTGGATTCTAAT
GTTTCTGATATGAGTATCAACGCACCAAAGGGACTGTTTCCTCCAGAGCC
CGAACATTATCGAGGACCGAAGCTGAAAGTTGCTATCATTGGAGCTGGGC
TTGCAGGCATGTCAACTGCAGTGGAACTCTTGGATCAAGGGCACGAGGTG
GATATATATGAGTCAAGATCTTTTATTGGTGGCAAAGTTGGTTCTTTTGT
TGATAAACGTGGAAATCATATTGAAATGGGATTACACGTTTTCTTTGGTT
GCTACAACAATCTTTTCCGATTAATGAAAAAGGTGGGTGCAGATAACAAT
CTGCTTGTGAAGGATCACACTCACACTTTTGTAAACAAAGGGGGTCAAAT
TGGAGAACTAGATTTTCGCTTTCCGGTTGGGGCACCATTACATGGGATAA
GAGCATTTTTGACCACAAATCAGCTTAAGACTTATGATAAGGCTAGAAAT
GCTGTGGCTCTCGCACTGAGTCCAGTTGTCAGAGCTCTTGTTGATCCGGA
TGGTGCACTGAGGGAGATAAGGAATTTGGATAGTATTAGCTTTTCAGACT
GGTTTATGTCCAAAGGTGGCACGCGGACAAGTATTCAAAAAATGTGGGAT
CCAGTTGCCTATGCCCTTGGGTTTATTGACTGTGATAATATCAGTGCCCG
TTGCATGCTAACCATATTTGCACTGTTTGCCACGAAGACCGAGGCTTCCC
TTTTGCGGATGCTGAAGGGTTCACCAGACATTTATTTGAGTGGCCCTATC
CAGAAGTACATCACAGATAGAGGGGGAAGGTTCCATCTTAGGTGGGGATG
CAGAGAAGTACTTTATGATAAATCTGCTGATGGGAGCACTTATGTTACCG
GACTTTCCATGTCAAAGGCTACTGCCAAGAAAATTGTGGAAGCTGATGCT
TATGTTGCTGCCTGTGATGTCCCTGGAATCAAAAGATTAATCCCATCAGA
GTGGAGGGAAAAGGAGTTTTTCAATAACATATACGAACTGGTTGGAGTTC
CTGTCGTCACAGTGCAACTCAGATACAATGGTTGGGTTACAGAATTGCAG
AATATAGAAATGTCAAGGCAACTGAGGAAAGCTACTGGGTTAGATAACCT
TCTCTATACTCCCGATGCAGATTTTTCTTGCTTTGCAGACCTTGCACTTG
CATCGCCTGAAGATTATTACATTGAGGGGCAAGGATCATTGCTCCAATGT
GTTCTGACGCCAGGAGATCCATACATGCCCTTGCCAAATGAAGAAATTAT
TTCAAGGGTAGCAAAACAGGTTATATCACTGTTCCCATCATCTCAAGGTT
TAGAAGTGACTTGGTCATCTGTCGTTAAAATTGGACAATCTCTGTACCGT
GAGGGACCTGGTAAAGATCCATTTAGACCTGACCAAAAGACACCAGTGAA
GAATTTCTTTCTTTCTGGCTCTTACACAAAGCAGGATTACATAGACAGCA
TGGAAGGTGCAACCTTATCCGGCCGGCAAACTTCGGCCTATATCTGTGAT
GCCGGGGAAGAATTGGTGGCATTGCGGAAGGAGCTTGTTGCACAGCTTAA
AGACGACATTAAATTTACAAATACTAAAGATGAATTGAGTCTAGTATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR014103Zeta_caro_desat
IPR036188FAD/NAD-bd_sf
IPR002937Amino_oxidase
Vocabulary: Biological Process
TermDefinition
GO:0055114obsolete oxidation-reduction process
GO:0016117carotenoid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00167199,9'-di-cis-zeta-carotene desaturase activity
GO:0016491oxidoreductase activity