Ca_19456.1, Ca_19456.1_ICC4958_v2 (mRNA) Cicer arietinum
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ca_19456.1 vs. DB:Swiss
Match: PUB43_ARATH (U-box domain-containing protein 43 OS=Arabidopsis thaliana OX=3702 GN=PUB43 PE=2 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 4.707e-59 Identity = 220/785 (28.03%), Postives = 375/785 (47.77%), Query Frame = 1 Query: 781 QSFYCPITHDVMVEPVETSSDQTFERSAIEKWFAE----GNKL-CPMTLIPLDTSVLRPNKTLKQSIEEWKDRNTMITIATLKEKIQFGDDDNEVMHCLKTLQDLCEQKEQHKEWVILEDYMQVLIQILGSKNRDVRIRALSTLCILANDNEEAKERIVIVDNAIDSIVHSLGRRQEE-RKLAVALLLELSKYDLAREHIGKVQGCILLLV--TMSNGDDNQAARDATELLDNLSYSDQNVIQMAKANYFRHLLQRLSAGQDDVKMIMAKTLSEMELTDHNKESLFDGGVLAPLLHLFLHNDLQVKTVATKALRNLSTLKRNGLEMIRQGAVRPFLDLLF-----QHNIQRSSLWEDVAAIIMQLASSTISQDAGTPILLLESDDDVFGLFPLVSVTQPGVQQNIIQTFCILCQSSSSSY-IKTKLNECSAIPELVRFFE-NENLNLRASAVKLFSCLVESCDKSIVLENVDQKCINTLLQILEFSSDE-----EEIVSAMEIICHLPEIEQI--TQWIIDANVLPIIYKYV--QDGRDRDNQ-RSNLVEKAVGALHRFTVPTNLEWQKV--AAKTGIITVLVQLLESGTTLTKQRA-ALCLAEFSKSSARLSR-PILKRKGLC-----CFSGPKEIR--CRVHGGICTVMSSFCLLEAEAIGPLTRALGESDSGVCEASLDALLTLIE-GEKLESGSKVLAKANAI-PLIIKFLSSSSLGLQEKSLQALERIFQLTEFKQMFG--ASAQMPLVDLTQRNSGRLRSMSARVLAHLNVLHDQSSYF 3015 ++F CP+T VM PV + QTFER AIEKWF E G L CP+T L + L P+ L+ +IEEW+ RN + + ++ + G+ + ++ LK ++++C + ++ V ++++ +L S + +VR +AL TL ++ +EE+K IV + + +IV L + + R+ AV++L ELSK + E IG + G I+LLV T S ++ A + L NL S++NV QMA + LL +L G + K+ MA L + L + K + V + L+ L D+ + A AL N+S+ + + +I G + P + LF Q I+ + + A I+ + G L S++ V L L S T P +Q ++ L +S + + + +AI LV+F E +EN +LR +++KL + S S L N + + L ++ S+ EE +A ++ LPE + + + + + II K V + G R + +E V L R T E + + ++ + LL+S + QRA A L S S L++ P L C C S P + C++H GIC+V SFCL+E +A+ L L + V +L AL TL+E G + G +++ +A+ I P++ L + + L+ +++ +ERI ++ E + G + LVD Q R R ++ + L H++ + + S F Sbjct: 27 EAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSIALRNTIEEWRARNDALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQRVCNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKA-IVAEGDTVRTIVKFLSQEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVK-VIVAQTVGSSLIDLMRTRDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYVGPNQLPIRLKEVSATILANIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQGKLLAVLVGLTSCPNSVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLHNI--SPHMSEELANALRSTVGQLGSLVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGAFEKIISKIVGIRQGEIRGIRFERTFLEGLVSILARITFALTKETDATLFCCEKNLPSLFLDLLQSNSQDNIQRASATALENLSLESKNLTKIPELPPPTYCVSIFSCLSKPPVVLGICKIHQGICSVRESFCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLIDEADGITPILNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVDAFQNADFRTRQIAEKALRHIDKIPNFSGIF 807
BLAST of Ca_19456.1 vs. DB:Swiss
Match: PUB44_ARATH (U-box domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN=PUB44 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 7.847e-53 Identity = 215/784 (27.42%), Postives = 369/784 (47.07%), Query Frame = 1 Query: 781 QSFYCPITHDVMVEPVETSSDQTFERSAIEKWFAEGN-----KLCPMTLIPLDTSVLRPNKTLKQSIEEWKDRNTMITIATLKEKIQFGDDDNEVMHCLKTLQDLCEQKEQHKEWVILEDYMQVLIQILGSKNRDVRIRALSTLCILANDNEEAKERIVIVDNAIDSIVHSLGRRQEE-RKLAVALLLELSKYDLAREHIGKVQGCILLLV--TMSNGDDNQAARDATELLDNLSYSDQNVIQMAKANYFRHLLQRLSAGQDDVKMIMAKTLSEMELTDHNKESLFDGGVLAPLLHLFLHNDLQVKTVATKALRNLSTLKRNGLEMIRQGAVRPFLDLLFQ--HNIQRSSLWEDVAAIIMQLASSTISQDAGTPILLLESDDDVFGLFPLVSVTQPGVQQNIIQTFCILCQSSSS-SYIKTKLNECSAIPELVRFFE-NENLNLRASAVKLFSCLVESCDKSIVLENVDQKCINTLLQ-------ILEFSSDEEEIVSAMEIICHLPEIE-QITQWIIDANVLPIIYKYVQDGRDRDNQRSNLV----EKAVGALHRFTVPTNLEWQKV--AAKTGIITVLVQLLES-GTTLTKQRAALCLAEFSKSSARLSR----PILKRKG--LCCFSGPKEIR--CRVHGGICTVMSSFCLLEAEAIGPLTRALGESDSGVCEASLDALLTLIE-GEKLESGSKVLAKANAIPLIIKFL-SSSSLGLQEKSLQALERIFQLTEFKQMFG--ASAQMPLVDLTQRNSGRLRSMSARVLAHLNVLHDQSSYF 3015 ++F CP+T +VM +PV + +TFER AIEKWF E CP+T L ++ + + L+ +IEEW+ RN + ++ + G+ + +++ L ++ +C ++ V + ++I +L S + VR +AL TL ++ ++E+K IV + + ++V L + R+ AV+LL ELSK + E IG + G ++LLV T SN ++ A L+N+ S++ V QMA + LL +L G + K+ MA L E+ L + K L V + L+ L D+ + A KAL +S+ + + +I +G + P + LF N L E A I+ + + D T L S++ V L L+S T P +Q +++ L + + + AI LV+F E EN +LR +++KL L + E + + T Q I E + EE +A ++ LP+ + +TQ +++ I V R D + V E V L R T N E + + + + ++ + LL+S G + +A+ L S S +L+R P + G C P + C++H GIC++ +FCL+E A+ L L + V EA+L AL +L+E G +E G K+L +A+ I I+ L + + L +++ +ERI ++ + + S LVD Q R R ++ L H++ + + SS F Sbjct: 25 EAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIALRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALMHVRQICRTIRSNRHGVRNSQLIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKA-IVAEGDTVRTLVKFLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLVGLTSSNSENVSIVEKADRTLENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVK-VLVAQTVGSSLVDLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYVGPNNLPIRLKEVSATILANIVNIGYDFDKAT----LVSENRVENLLHLISNTGPAIQCKLLEVLVGLTSCPKTVPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNL-----SPFMSEELAKALCGTAGQLGSLVAIISEKTPITEEQAAAAGLLAELPDRDLGLTQEMLEVGAFEKIISKVFGIRQGDIKGMRFVNPFLEGLVRILARITFVFNKEARAINFCREHDVASLFLHLLQSNGQDNIQMVSAMALENLSLESIKLTRMPDPPPVNYCGSIFSCVRKPHVVNGLCKIHQGICSLRETFCLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVLRENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENALKHIDKIPNFSSIF 797
BLAST of Ca_19456.1 vs. DB:Swiss
Match: PUB42_ARATH (Putative U-box domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=PUB42 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 2.020e-48 Identity = 211/803 (26.28%), Postives = 366/803 (45.58%), Query Frame = 1 Query: 775 PLQSFYCPITHDVMVEPVETSSDQTFERSAIEKWF-AEGNK---LCPMTLIPLDTSVLRPNKTLKQSIEEWKDRNTMITIATLKEKIQFGDDDNEVMHCLKTLQDLCEQKEQHKEWVILEDYMQVLIQILGSKNRDVRIRALSTLCILANDNEEAKERIVIVDNAIDSIVHSLG-RRQEERKLAVALLLELSKYDLAREHIGKVQGCILLLVTMSNGD--DNQAARDATELLDNLSYSDQNVIQMAKANYFRHLLQRLSAGQDDVKMIMAKTLSEMELTDHNKESLFDGGVLAPLLHLFLHNDLQVKTVATKALRNLSTLKRNGLEMIRQGAVRPFLDLLFQHNIQRSSL--WEDVAAIIMQLASSTISQDA---GTPILLLESDDDVFGLFPLVSVTQP-GVQQNIIQTFCILCQSSSS-SYIKTKLNECSAIPELVRFFENENLNLRASAVKLFSCLVES---------CDKSIVLENVDQKCINTLLQILEFSSDEEEIVSAMEIICHLPE------IEQITQWIIDANVLPIIYKYVQDGRDRDNQRSNLVEKAVGALHRFTVPTNLEWQ--KVAAKTGIITVLVQLLESGTTLTKQR-AALCLAEFSKSSARLSRPILKR--KGLCCFSGPKEIR-----------CRVHGGICTVMSSFCLLEAEAIGPLTRALGESDSGVCEASLDALLTLIEGE-KLESGSKVLAKANAIPLIIKFLSSSSL-GLQEKSLQALERIF---------QLTEFKQMFGASAQMPLVDLTQRNSGRLRSMSARVLAHLNVLHDQSSYF 3015 P Q+F CP+T ++M +PV T + T ER A+ +WF + GN CP+T L T+ L N LK I+EWK RN I + G ++ V+ L+ LQ CE KE +K V +Q+L + L +++DVR L L LA++ + + +++ + ++ LG Q R A ALLLELSK A E IG +G IL+LVT D+ A+ + ++L NL +N+ QMA++ LL L+ G ++ ++ MA L E+++ H K++ L+ L ++ + A KAL ++S N ++ G ++ ++ +F + + + A I+ + S + + T L SD V+ + ++ + P + ++I+ L +S + + I + + E A ++ N + L A+KL L C EN+ Q C QI E+ VSA +++ LP + + + I+ + +L I+ + G ++ +E VG L RFT T E Q +A + +V V LL ++ QR +A L S ++ LSRP R K + S P+ C +H G+C+ ++FCL+EA AI L L V E++L A+ TL++ + ++E +L++ NA+ LI+ + L +K+ +++ ++++ + + G LV R G R M+ +L L+ + S+Y Sbjct: 246 PYQAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKL-TTELSANVVLKTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDALRDLQMTCEGKEYNKVQVREAGIIQLLDRYLTYRSKDVRFELLKFLRTLADEETDDGKEMIVKTITMSCVIKLLGSSHQPVRHAAQALLLELSKSQHACEKIGTARGAILMLVTAKYNRELDSFASETSDQILRNLEKCPENIKQMAESGLLEPLLGHLAEGSEETQVAMAAYLVEIDI-GHEKKTYVAEKACPALIGLVQSENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEEMFTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTHGHTLGSDYFVYNIIHMLKNSSPDDLNIDLIRILLSLSKSPRAMATIVSVIKETDASFAMIELINNPHDELGVGALKLLIALTPYIGHTLSERLCKTRGQPENLIQ-CPVEANQI-----TEKHAVSA-KLLAKLPHQNLTLNLALVNESIV-SEILHAIHLIQRSGARTSRYATDFLEGLVGILVRFTT-TLYEPQMMYLARNHDLTSVFVDLLMKTSSDEVQRLSATGLENLSSTTMTLSRPPQPRSTKFMGSLSMPRSFSLRSSKKKQIEICAIHRGVCSAKNTFCLVEANAITKLLACLQSDKVEVVESALAAICTLLDDKVEVEKSLSMLSEMNAVQLILNAVKEHKKESLLQKAFWMIDKFIIRGGDKYASEISQDRMLSGM-----LVSAFHRGDGNTRQMAENILRRLDKMPSFSTYI 1032
BLAST of Ca_19456.1 vs. DB:Swiss
Match: PUB15_ARATH (U-box domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=PUB15 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 4.712e-19 Identity = 133/558 (23.84%), Postives = 230/558 (41.22%), Query Frame = 1 Query: 106 QKNSFQELASYLERITPILKELRK-EKVSDSETFNRAIDIINHETKDAKLLALECSKKSKVYLLMKCQSIVKRLENHVKELSKALELLPLAASGLSVGILEEIEKLCDNMEANGFKAAVIEEEILEKIESGIRENNCNRSYANNLII------LIAETLGITKENSTMKKELEEFKKDIENSRVNKELAEVMHMDQIIALLERADATSSPNERKIKYFAKRKSLGSRILEPLQSFYCPITHDVMVEPVETSSDQTFERSAIEKWFAEGNKLCPMTLIPLDTSVLRPNKTLKQSIEEWKDRNTMITIATLKEKIQFGDDDNEVMHCLKTLQDLCEQKEQHKEWVILEDYMQVLIQILGSKNRDVRIRALSTLCILANDNEEAKERIVIVDNAIDSIVHSLGRRQEERKLAVALLLELSKYDLAREHIGKVQGCILLLVTMSNGDDNQAARDATELLDNLSYSDQNVIQMAKANYFRHLLQRLSAGQDDVKMIMAKTLSEMELTDHNKESLFDGGVLAPLLHLFLHNDLQVKTVATKALRNLSTLKRNGLEMIRQGAVRP 1758 QK F L L+ + P L E+R E S NR + AK L CS SK+Y+ + ++++ R + ++L++ L P +S +EI+ LC ++ K ++I ++ + + + A++ II L +T+ K + + L + K + N + + E+++ + + LE D P K + + ++ P F CPIT ++M++PV ++ QT+E+ +I+KWF G+K CP T LD L PN LK I +W ++N + EK D NE QK D + +L++ L S + + R++ + +LA +N E + V++ NA G I LLV + + D+ +A L NLS + N ++ ++++ L G + + A L + + D NK ++ + PL+ L H L+ K A AL NLS N I G V+P Sbjct: 75 QKECFN-LVRRLKILIPFLDEIRGFESPSCKHFLNRLRKVF----LAAKKLLETCSNGSKIYMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKA--KRRTDTQDIELAVDMMVVFSKTDPRNADSAIIERLAKKLELQTIDDLKTETIAIQSLIQDKGGL-NIETKQHIIELLNKFKKLQGLEATDILYQP------VINKAITKSTSLILP-HEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKNNF----KIPEKEVSPDSQNE-------------QK----------DEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENR---VLIANA---------------------------------------GAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQP 548
BLAST of Ca_19456.1 vs. DB:Swiss
Match: PUB17_ARATH (U-box domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=PUB17 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.591e-17 Identity = 116/482 (24.07%), Postives = 206/482 (42.74%), Query Frame = 1 Query: 244 AKLLALECSKKSKVYLLMKCQSIVKRLENHVKELSKALELLPLAASGLSVGILEEIEKLCDNMEANGFKAAVIEEEILEKIES---GIRENNCNRSYANNLIILIAETLGITKENSTMKKELEEFKKDIEN---------SRVNKELAEVMHMDQIIALLERADAT----SSPNERKIKYFAKRKSLGSRILEPLQSFYCPITHDVMVEPVETSSDQTFERSAIEKWFAEGNKLCPMTLIPLDTSVLRPNKTLKQSIEEWKDRNTMITIATLKEKIQFGDDDNE------------------VMHCLKTLQD---------------LCEQKEQHKEWVILEDYMQVLIQILGSKN---RDVRIRALSTLCILANDNEEAKERIVIVDNAIDSIVHSL--GRRQEERKLAVALLLELSKYDLAREHIGKVQGCILLLVTMSNGDDNQAARDATELLDNLSYSDQNVIQMAKANYFRHLLQRL 1527 +K+L C++ SK++LL++ SI + +E+S L++LP+ GLS I E+IE L +E + E S G S +L + E LGI +++ + + E+E ++ I N S +N +A + ++ E ++P + + + A+ +G + + F CPI+ D+M +PV S+ QT++R++I +W EG+ CP T L S + PN+ LK I +W T + + + +F D NE V +K L D L + ++++ ++ + L ++L S+N ++ + A+ L I E+ K RI+ + ++SIV L G E ++ A A L LS ++ I V C+ L + + +DA L NLS N +M + L+ L Sbjct: 117 SKILVDYCAQSSKLWLLLQNPSISGYFHDLNQEISTLLDVLPVNDLGLSDDIREQIELLQRQSRKARLYIDKNDESLRESFYSFLDGFENGKIPSSV--DLRMFFVEKLGI-RDSKSCRSEIEFLEEQIVNHDGDLEPTGSVINGFVAITRYCRFLLFGFEEDGMEWWIENNPKKPRKGFVAQE--IGDTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALKNLIVQW------CTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIY----EKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGAL 583
BLAST of Ca_19456.1 vs. DB:Swiss
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=PUB12 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.580e-17 Identity = 131/537 (24.39%), Postives = 223/537 (41.53%), Query Frame = 1 Query: 55 IIDTIGEFICYASDVLVQKNSFQELASYLERITPILKELRKEKVSDSETFNRAIDIINHETKDAKLLALECSKKSKVYLLMKCQSIVKRLENHVKELSKALELLPLAASGLSVGILEEIEKLCDNMEANGFKAA--VIEEEILEKIES------GIRENNCNRSYANNLIILIAETLGITKENSTMKKELEEFKKDIENSRVNKELAEVMHMDQIIALLERADATSSPNERKIKYFAKRKSLGSR-----ILEPLQSFYCPITHDVMVEPVETSSDQTFERSAIEKWFAEGNKLCPMTLIPLDTSVLRPNKTLKQSIEEWKDRNTM-------ITIATLKEKIQFGDDDNEVMHCLKTLQDLCEQKEQHKEWVILEDYMQVLIQILGSKNRDVR--------IRALSTLCILANDN----------------EEAKERIVIVDNAIDSIVHSLGR-RQEERKLAVALLLELSKYDLAREHIGKVQGCILLLVTMSNGDDNQAARDATELLDNLSYSDQNVIQMAKANYFRHLLQRLS 1530 +ID+I E + V K L+ L + P+L+E+R + S SE N A+ + AK L S SK+YL+++ ++ + + L +AL ++P +S + E++E + + + K V ++E+ + + S + E++ R A L ++ L T+E+ + + D K M ++ ++ T +PN K SR +L P + F CPI+ ++M +PV SS QT+ER I+KW G+ CP T L + ++ PN L+ I +W + N + I+ + K D+E + L L Q+ + + E I++L +N R I L L ++ND+ +E K +IV A+ IVH L + E R+ A A L LS D + IG G I LVT+ + + +DA L NL N + +A L++ L+ Sbjct: 13 LIDSINEIASISDSVTPMKKHCANLSRRLSLLLPMLEEIRDNQESSSEVVN-ALLSVKQSLLHAKDLLSFVSHVSKIYLVLERDQVMVKFQKVTSLLEQALSIIPYENLEISDELKEQVELVLVQLRRSLGKRGGDVYDDELYKDVLSLYSGRGSVMESDMVRRVAEKLQLMTITDL--TQESLALLDMVSSSGGDDPGESFEK-------MSMVLKKIKDFVQTYNPNLDDAPLRLKSSLPKSRDDDRDMLIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRSAAGE------IRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAA-GAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLT 532
BLAST of Ca_19456.1 vs. DB:Swiss
Match: PUB16_ARATH (U-box domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=PUB16 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.863e-17 Identity = 102/448 (22.77%), Postives = 202/448 (45.09%), Query Frame = 1 Query: 262 ECSKKSKVYLLMKCQSIVKRLENHVKELSKALELLPLAASGLS---VGILEEIEKLC-DNMEANGFKAAVIEEEILEKIESGIRENNCNRSYANNLIILIAETLGITKENSTMKKELEEFKKDIENS---RVNKELAEVMHMDQIIALLERADATSSPNERKIKYFAKRKSLGSRILEPLQSFYCPITHDVMVEPVETSSDQTFERSAIEKWFAEGNKLCPMTLIPLDTSVLRPNKTLKQSIEEW-KDRN----------------------TMITIATLKEKIQFGDDDNEVMHCLKTLQDLCEQKEQHKEWVILEDYMQVLIQILGSKNRDVRIRALST---LCILANDNEEAKERIVIVDNAIDSIVHSL--GRRQEERKLAVALLLELSKYDLAREHIGKVQGCILLLVTMSNGDDNQAARDATELLDNLSYSDQNVIQMAKAN 1500 +CS+ SK++LL++ + V +LS L++LPL LS ++ + K C D+++ + + ++ + I +GI+ S ++ +I I LG++ +++++ E++ + +I++ R A ++ + + + +T +P+ F + +SL + F CPIT ++M +PV ++ QT++R +I+ W G+ CP T L + L PN+ LK I W +D+ T + ++ L EK+ D + V L+ L + + + + L++ L ++ ++I A++T L IL E+ K RI+ D A++ ++ L G E + A A L L+ R +G+ + LV ++ + RDA + NL +NV + +A Sbjct: 109 DCSRVSKLWLLLQIDIVAFNFHELVTDLSTVLDILPLHDFDLSDDAQDLISLLTKQCSDSVQFVDARDVALRRKVTDTI-AGIKHQI---SPDHSTLIKIFNDLGLS-DSASLTDEIQRLEDEIQDQIDDRSKSAAASLIGLVRYSKCVLYGPSTPAPD------FRRHQSLSDANIP--ADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALKNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNGVVFE----LRALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSIL----EQNKTRIMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDALVAILNLVAERENVGRFVEAG 535
BLAST of Ca_19456.1 vs. DB:Swiss
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.292e-16 Identity = 121/547 (22.12%), Postives = 226/547 (41.32%), Query Frame = 1 Query: 37 TTAISQIIDTIGEFICYASDVLVQKNSFQELASYLERITPILKELRKEKVSDSETFNRAIDIINHETKDAKLLALECSKKSKVYLLMKCQSIVKRLENHVKELSKALELLPLAASGLSVGILEEIEKLCDNMEANGFKAAVIEEEILEKIESGIRENNCNRSYANNLIILIAETLG----------ITKENSTMKKELEEFKKDI-ENSRVNKELAEVMHM-------------DQIIALLERADA-TSSPNERKIKYFAKRKSLGSRILEPLQSFYCPITHDVMVEPVETSSDQTFERSAIEKWFAEGNKLCPMTLIPLDTSVLRPNKTLKQSIEEWKDRNTMIT-----------------------IATLKEKIQFGDDDNEVMHCLKTLQDLCEQKEQHKEWVILEDYMQVLIQILGSKNRDVRIRALSTLCILANDNEEAKERIVIVDNAIDSIVHSLGRRQ-EERKLAVALLLELSKYDLAREHIGKVQGCILLLVTMSNGDDNQAARDATELLDNLSYSDQNVIQMAKANYFRHLLQRLS 1530 +A +ID + E + + K LA L+ + P+ +E+R+ SE + + + AK CS+ SK+YL+M+ + + +L +L ++L +P +S + E++E + + V ++E+ E ++S CN+S + + E + + +E+ + + + D+ EN +E+A V+ M +Q + + R++ TS+ +KI F CPI+ ++M +PV SS QT+ER+ IEKW G+ CP T L ++ L PN L+ I +W + N + I L ++ +G+ +++ ++ L ++ ++ + + +L+ +L + D RI+ S +L E + ++ AI IV L + E R+ A A L LS D + IG + G I LV + N + +DA L NL N + +A L + L+ Sbjct: 6 ASAAQSLIDVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISEDTLKTLMNLKEAMCSAKDYLKFCSQGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAKGRVDVSDDELYEDLQS-----LCNKSSDVDAYQPVLERVAKKLHLMEIPDLAQESVALHEMVASSGGDVGENI---EEMAMVLKMIKDFVQTEDDNGEEQKVGVNSRSNGQTSTAASQKIPVIP-------------DDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQ-RSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTP--DSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGAL-GAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLT 527
BLAST of Ca_19456.1 vs. DB:Swiss
Match: PUB12_ORYSJ (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB12 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.476e-14 Identity = 76/272 (27.94%), Postives = 123/272 (45.22%), Query Frame = 1 Query: 787 FYCPITHDVMVEPVETSSDQTFERSAIEKWFAEGNKLCPMTLIPLDTSVLRPNKTLKQSIEEWKDRNTM----------------------ITIATLKEKIQFGDDDNEVMHCLKTLQDLCEQKEQHKEWVILEDYMQVLIQILGSKNRDVRIRALSTLCILA-NDNEEAKERIVIVD-NAIDSIVHSLGR-RQEERKLAVALLLELSKYDLAREHIGKVQGCILLLVTMSNGDDNQAARDATELLDNLSYSDQNVIQMAKANYFRHLLQRL 1527 F CPI+ ++M +PV SS QT+ERS I+KW G+K CP T PL + L PN LK I +W + N + + +L +++ G+ D E ++ L ++ ++ + + +L+ +L S + + A++ L L+ ++N +A IVD +AI IV L E R+ A A L LS D + IG G I L+ + + +DA + NL N ++ KA HL+ L Sbjct: 232 FRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLISQWCEANGIELPKNKQNSRDKKAAKSSDYDHAGLVSLMNRLRSGNQD-EQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKAS----IVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAA-GAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFL 497
BLAST of Ca_19456.1 vs. DB:Swiss
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUB2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.338e-14 Identity = 96/410 (23.41%), Postives = 159/410 (38.78%), Query Frame = 1 Query: 787 FYCPITHDVMVEPVETSSDQTFERSAIEKWFAEGNKLCPMTLIPLDTSVLRPNKTLKQSIEEWKDRNTMITIATLKEKIQFGDDDNEVMHCLKTLQDLCE------QKEQHKEWVILEDYMQVLIQILGSKNRDVRIRALSTLCILANDNEEAKERIVIVDNA---------------IDSIVHSLGRRQEERKLAVALL--LELSKYDLAREHIGKVQ----------------GCILLLVTMSNGDDNQAARDATELLDNLSYSDQNVIQMAKANYFRHLLQRLSAGQ-DDVKMIMAKTLSEMELTDHNKESLFDGGVLAPLLHLFLHNDLQVKTVATKALRNLSTLKRNGLEMIRQGAVRPFLDLLFQHNIQRSSLWEDVAAIIMQLASS-----TISQDAGTPILL 1881 F C ++ ++M +PV +S QTFER I+KW G +CP T L + L PN ++ + W + N + + D E++H + L E + H E + E+ QV S++ +C +N A +R + N I + V G L+ L+ S D RE +++ I LV++ D + DA L NLS +D N +A++ L+ L G ++ K A TL + + + K + + G + PL+ L L K A AL NLS N ++I GAVR ++L+ + E ++ LA+ I ++ G P+L+ Sbjct: 244 FRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVRAFLASWCETNNV-----------YPPDPLELIHSSEPFPLLVESVRASSSENGHSESLDAEELRQVF-----SRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPATVRETGSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM----DPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLV 633 The following BLAST results are available for this feature:
BLAST of Ca_19456.1 vs. DB:Swiss
Analysis Date: 2019-05-21 (BLAST: C. arietinum ICC 4958 v2.0 (desi) Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: C. arietinum ICC 4958, v2.0 (desi)
Date Performed: 2019-05-21
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ca_19456.1_ICC4958_v2 ID=Ca_19456.1_ICC4958_v2; Name=Ca_19456.1; organism=Cicer arietinum; type=mRNA; length=5736bpback to top protein sequence of Ca_19456.1_ICC4958_v2 >Ca_19456.1_ICC4958_v2 ID=Ca_19456.1_ICC4958_v2; Name=Ca_19456.1_ICC4958_v2; organism=Cicer arietinum; type=polypeptide; length=1005bpback to top mRNA from alignment at Ca_LG_7:7018334..7024069+ Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Ca_19456.1_ICC4958_v2 ID=Ca_19456.1_ICC4958_v2; Name=Ca_19456.1; organism=Cicer arietinum; type=mRNA; length=5736bp; location=Sequence derived from: Ca_LG_7:7018334..7024069+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca_LG_7:7018334..7024069+ >Ca_19456.1_ICC4958_v2 ID=Ca_19456.1_ICC4958_v2; Name=Ca_19456.1; organism=Cicer arietinum; type=CDS; length=3018bp; location=Sequence derived from: Ca_LG_7:7018334..7024069+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|