chickpea-LasseterxICC3996-F6-RIL

Map Overview


Name	chickpea-LasseterxICC3996-F6-RIL
Species	Cicer arietinum
Map type	genetic
Population type	RIL
Map unit	cM
Maternal parent	Lasseter
Paternal parent	ICC3996
Population size	150
Number of loci	434
Number of QTL	4
Number of linkage groups	12
Publication	[view all]
Contact	John Forster

Stock

Name

Type

Details

Lasseter_x_ICC3996-F6-RIL

population

Origin detail:	Australia
Population size:	150

Contact

Name

Details

John Forster

First name:	John
Last name:	Forster
Title:	Researcher
Institution:	Biosciences Research Division, Department of Environment and Primary Industries, AgriBio
Address:	Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC 3083, Australia
Country:	Australia
Email:	john.forster@depi.vic.gov.au
Phone:	61 390327054
Last update:	Mar 2017

Publication


Year	Publications
2014	Stephens A, Lombardi M, Cogan NOI, Forster JW, Hobson K, Materne M, Kaur S. Genetic marker discovery, intraspecific linkage map construction and quantitative trait locus analysis of ascochyta blight resistance in chickpea (Cicer arietinum L.). Molecular breeding. 2014; 33(2):297-313.

Map Loci

This map contains 434 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40001335	SNP_40001335	marker_locus	0.6 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40000262	SNP_40000262	marker_locus	0.6 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40000261	SNP_40000261	marker_locus	0.6 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40000921	SNP_40000921	marker_locus	0.6 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40001334	SNP_40001334	marker_locus	0.6 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40000454	SNP_40000454	marker_locus	0.6 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40000865	SNP_40000865	marker_locus	1.6 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40000403	SNP_40000403	marker_locus	7.2 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40001638	SNP_40001638	marker_locus	12.9 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40001612	SNP_40001612	marker_locus	12.9 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40001611	SNP_40001611	marker_locus	12.9 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40001640	SNP_40001640	marker_locus	12.9 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40001907	SNP_40001907	marker_locus	12.9 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40001857	SNP_40001857	marker_locus	12.9 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40001858	SNP_40001858	marker_locus	12.9 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40000745	SNP_40000745	marker_locus	14.3 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40001390	SNP_40001390	marker_locus	34.7 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	TA22	TA22	marker_locus	52 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	CESSR71	CESSR71	marker_locus	52.8 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	TA80	TA80	marker_locus	52.8 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40000962	SNP_40000962	marker_locus	52.8 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40000553	SNP_40000553	marker_locus	53.1 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40001899	SNP_40001899	marker_locus	60.6 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40001416	SNP_40001416	marker_locus	68.9 cM
chickpea-LasseterxICC3996-F6-RIL.LG6.1	SNP_40002005	SNP_40002005	marker_locus	71.4 cM

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Map QTL

This map contains 4 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
chickpea-LasseterxICC3996-F6-RIL.LG4.1	qABR.LasseterxICC3996-LG4.1.2005	QTL	35 cM	50 cM	-
chickpea-LasseterxICC3996-F6-RIL.LG4.1	qABR.LasseterxICC3996-LG4.2.2005	QTL	0 cM	2.7 cM	-
chickpea-LasseterxICC3996-F6-RIL.LG4.2	qABR.LasseterxICC3996-LG4.1.2009	QTL	35 cM	50 cM	-
chickpea-LasseterxICC3996-F6-RIL.LG4.2	qABR.LasseterxICC3996-LG4.2.2009	QTL	0 cM	2.7 cM	-

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