GR404278

EST Overview
NameGR404278
Unique NameGR404278
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length462
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR404278 vs. SwissProt
Match: DECR2_ARATH (Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.249e-14
Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = -2
Query:  330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461
            T++VDGGLWLS+PRHLPKEAV+Q+SRA+EKRSR +PVG+P SKL
Sbjct:  255 TMVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298          
BLAST of GR404278 vs. TrEMBL
Match: D7T0V6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_85.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036762001 PE=4 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.055e-14
Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = -2
Query:  330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461
            T++VDGGLWLSRPRHLPKEAV+Q+SRA+EKRSR  PVGVPKSKL
Sbjct:  254 TLVVDGGLWLSRPRHLPKEAVKQLSRAVEKRSRGVPVGVPKSKL 297          
BLAST of GR404278 vs. TrEMBL
Match: C6TMK2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.505e-14
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = -2
Query:  330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461
            T+IVDGGLWLSRPRHL KEAV+QVSR++EKRSRN PVGVPKSKL
Sbjct:  255 TMIVDGGLWLSRPRHLEKEAVKQVSRSVEKRSRNVPVGVPKSKL 298          
BLAST of GR404278 vs. TrEMBL
Match: B9RHY8_RICCO (2,4-dienoyl-CoA reductase, putative OS=Ricinus communis GN=RCOM_1574620 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.740e-13
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = -2
Query:  330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461
            TI+VDGGLWLSRPRHLPK+AV+Q+SR +EKRSR+ PVGVP SKL
Sbjct:  254 TIVVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDAPVGVPSSKL 297          
BLAST of GR404278 vs. TrEMBL
Match: B9HDH1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_818972 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.272e-13
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = -2
Query:  330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461
            T+IVDGGLWLSRPRHLPK+ V+QVSRA+EK+SRN P GVP SKL
Sbjct:  254 TLIVDGGLWLSRPRHLPKDEVKQVSRAVEKKSRNAPAGVPSSKL 297          
BLAST of GR404278 vs. TrEMBL
Match: D7L0K5_ARALY (Short-chain dehydrogenase/reductase family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478642 PE=4 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.967e-13
Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = -2
Query:  330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461
            T++VDGGLWLS+PRHLPKEAV+Q+SRA+EKRSR +PVG+P SKL
Sbjct:  255 TVVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298          
BLAST of GR404278 vs. TrEMBL
Match: Q0WMN4_ARATH (Putative uncharacterized protein At3g12790 OS=Arabidopsis thaliana GN=At3g12790 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.062e-13
Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = -2
Query:  330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461
            T++VDGGLWLS+PRHLPKEAV+Q+SRA+EKRSR +PVG+P SKL
Sbjct:  255 TMVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298          
BLAST of GR404278 vs. TrEMBL
Match: C6TJ97_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.628e-11
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = -2
Query:  330 IIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 458
            +IVDGGLWLSRPRHL KEAV+QVSR++E RSRN  V VPKSKL
Sbjct:  256 MIVDGGLWLSRPRHLAKEAVKQVSRSVENRSRNASVSVPKSKL 298          
BLAST of GR404278 vs. TrEMBL
Match: A5AHN8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019955 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.738e-11
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = -2
Query:  330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461
            T+ VDGGLWLS+PRHL KEAV+Q+SRA+E+RSR   VGVPKSKL
Sbjct:  254 TLTVDGGLWLSKPRHLSKEAVKQLSRAVERRSRKILVGVPKSKL 297          
BLAST of GR404278 vs. TrEMBL
Match: B9I4N3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570603 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.188e-11
Identity = 28/44 (63.64%), Postives = 39/44 (88.64%), Query Frame = -2
Query:  330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461
            T++VDGG WLS+PRH PK+AV+Q+SR +EKRS++ P G+P+SKL
Sbjct:  256 TLVVDGGEWLSKPRHFPKDAVKQLSRVVEKRSKHAPAGIPRSKL 299          
BLAST of GR404278 vs. TrEMBL
Match: B9SCD4_RICCO (2,4-dienoyl-CoA reductase, putative OS=Ricinus communis GN=RCOM_0893330 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.081e-11
Identity = 30/43 (69.77%), Postives = 38/43 (88.37%), Query Frame = -2
Query:  330 IIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 458
            ++VDGG WL +P HLPK+AV+Q+SR +EKRS+N PVGVPKSKL
Sbjct:  256 LVVDGGDWLRKPPHLPKDAVKQLSRVVEKRSKNAPVGVPKSKL 298          
BLAST of GR404278 vs. TAIR peptide
Match: AT3G12800.1 (| Symbols: SDRB, DECR | short-chain dehydrogenase-reductase B | chr3:4063463-4064757 REVERSE LENGTH=298)

HSP 1 Score: 77.411 bits (189), Expect = 3.787e-15
Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = -2
Query:  330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461
            T++VDGGLWLS+PRHLPKEAV+Q+SRA+EKRSR +PVG+P SKL
Sbjct:  255 TMVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298          
The following BLAST results are available for this feature:
BLAST of GR404278 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
DECR2_ARATH3.249e-1477.27Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidops... [more]
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BLAST of GR404278 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
D7T0V6_VITVI2.055e-1484.09Whole genome shotgun sequence of line PN40024, sca... [more]
C6TMK2_SOYBN3.505e-1486.36Putative uncharacterized protein OS=Glycine max PE... [more]
B9RHY8_RICCO1.740e-1379.552,4-dienoyl-CoA reductase, putative OS=Ricinus com... [more]
B9HDH1_POPTR2.272e-1379.55Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7L0K5_ARALY2.967e-1377.27Short-chain dehydrogenase/reductase family protein... [more]
Q0WMN4_ARATH5.062e-1377.27Putative uncharacterized protein At3g12790 OS=Arab... [more]
C6TJ97_SOYBN1.628e-1179.07Putative uncharacterized protein OS=Glycine max PE... [more]
A5AHN8_VITVI4.738e-1175.00Putative uncharacterized protein OS=Vitis vinifera... [more]
B9I4N3_POPTR6.188e-1163.64Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SCD4_RICCO8.081e-1169.772,4-dienoyl-CoA reductase, putative OS=Ricinus com... [more]
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BLAST of GR404278 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G12800.13.787e-1577.27| Symbols: SDRB, DECR | short-chain dehydrogenase-... [more]
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Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR404278 ID=GR404278; Name=GR404278; organism=Cicer arietinum; type=EST; length=462bp
CGCAAGTACCGATCATGAATTGAAAGTGACTAAGGATGTCTTAATTAAAG
TGTAGCCACTAGCCACATATCAAGTTCAAAGTTACAGCTGAATTTTCTTA
CAGTTCTTGCAAAGCACAGATAGCACAAAGTACACTCATGGGATCTAGCC
ACGGCCTTTTTATTTCTGTTGGATGTAACCGCAACTTTAAATTGTCACAT
TTGGAAAAAGTTCAAGTTCGTAATAATTTCAATTTATCCCTAACTGAAAT
CATATCCTCTATTCATTGTATTGCTTAAAAAAGTAACCCCGTGCAGTGTA
AAGGGTCTAATACTGAATCTGATGGCTCATAGCTTGCTTTTTGGAACACC
AACTGGTTCATTTCTGGATCTTTTTTCTATTGCTCGGGATACCTGCCTCA
CTGCCTCTTTCGGTAAATGACGAGGCCGGCTCAGCCAAAGTCCTCCATCA
ACTATGATAGTG
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