GR404278
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR404278 vs. SwissProt
Match: DECR2_ARATH (Peroxisomal 2,4-dienoyl-CoA reductase OS=Arabidopsis thaliana GN=At3g12800 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.249e-14 Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = -2 Query: 330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461 T++VDGGLWLS+PRHLPKEAV+Q+SRA+EKRSR +PVG+P SKL Sbjct: 255 TMVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298
BLAST of GR404278 vs. TrEMBL
Match: D7T0V6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_85.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036762001 PE=4 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.055e-14 Identity = 37/44 (84.09%), Postives = 42/44 (95.45%), Query Frame = -2 Query: 330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461 T++VDGGLWLSRPRHLPKEAV+Q+SRA+EKRSR PVGVPKSKL Sbjct: 254 TLVVDGGLWLSRPRHLPKEAVKQLSRAVEKRSRGVPVGVPKSKL 297
BLAST of GR404278 vs. TrEMBL
Match: C6TMK2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.505e-14 Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = -2 Query: 330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461 T+IVDGGLWLSRPRHL KEAV+QVSR++EKRSRN PVGVPKSKL Sbjct: 255 TMIVDGGLWLSRPRHLEKEAVKQVSRSVEKRSRNVPVGVPKSKL 298
BLAST of GR404278 vs. TrEMBL
Match: B9RHY8_RICCO (2,4-dienoyl-CoA reductase, putative OS=Ricinus communis GN=RCOM_1574620 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.740e-13 Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = -2 Query: 330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461 TI+VDGGLWLSRPRHLPK+AV+Q+SR +EKRSR+ PVGVP SKL Sbjct: 254 TIVVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDAPVGVPSSKL 297
BLAST of GR404278 vs. TrEMBL
Match: B9HDH1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_818972 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.272e-13 Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = -2 Query: 330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461 T+IVDGGLWLSRPRHLPK+ V+QVSRA+EK+SRN P GVP SKL Sbjct: 254 TLIVDGGLWLSRPRHLPKDEVKQVSRAVEKKSRNAPAGVPSSKL 297
BLAST of GR404278 vs. TrEMBL
Match: D7L0K5_ARALY (Short-chain dehydrogenase/reductase family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478642 PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.967e-13 Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = -2 Query: 330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461 T++VDGGLWLS+PRHLPKEAV+Q+SRA+EKRSR +PVG+P SKL Sbjct: 255 TVVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298
BLAST of GR404278 vs. TrEMBL
Match: Q0WMN4_ARATH (Putative uncharacterized protein At3g12790 OS=Arabidopsis thaliana GN=At3g12790 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.062e-13 Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = -2 Query: 330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461 T++VDGGLWLS+PRHLPKEAV+Q+SRA+EKRSR +PVG+P SKL Sbjct: 255 TMVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298
BLAST of GR404278 vs. TrEMBL
Match: C6TJ97_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.628e-11 Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = -2 Query: 330 IIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 458 +IVDGGLWLSRPRHL KEAV+QVSR++E RSRN V VPKSKL Sbjct: 256 MIVDGGLWLSRPRHLAKEAVKQVSRSVENRSRNASVSVPKSKL 298
BLAST of GR404278 vs. TrEMBL
Match: A5AHN8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019955 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.738e-11 Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = -2 Query: 330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461 T+ VDGGLWLS+PRHL KEAV+Q+SRA+E+RSR VGVPKSKL Sbjct: 254 TLTVDGGLWLSKPRHLSKEAVKQLSRAVERRSRKILVGVPKSKL 297
BLAST of GR404278 vs. TrEMBL
Match: B9I4N3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570603 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.188e-11 Identity = 28/44 (63.64%), Postives = 39/44 (88.64%), Query Frame = -2 Query: 330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461 T++VDGG WLS+PRH PK+AV+Q+SR +EKRS++ P G+P+SKL Sbjct: 256 TLVVDGGEWLSKPRHFPKDAVKQLSRVVEKRSKHAPAGIPRSKL 299
BLAST of GR404278 vs. TrEMBL
Match: B9SCD4_RICCO (2,4-dienoyl-CoA reductase, putative OS=Ricinus communis GN=RCOM_0893330 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.081e-11 Identity = 30/43 (69.77%), Postives = 38/43 (88.37%), Query Frame = -2 Query: 330 IIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 458 ++VDGG WL +P HLPK+AV+Q+SR +EKRS+N PVGVPKSKL Sbjct: 256 LVVDGGDWLRKPPHLPKDAVKQLSRVVEKRSKNAPVGVPKSKL 298
BLAST of GR404278 vs. TAIR peptide
Match: AT3G12800.1 (| Symbols: SDRB, DECR | short-chain dehydrogenase-reductase B | chr3:4063463-4064757 REVERSE LENGTH=298) HSP 1 Score: 77.411 bits (189), Expect = 3.787e-15 Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = -2 Query: 330 TIIVDGGLWLSRPRHLPKEAVRQVSRAIEKRSRNEPVGVPKSKL 461 T++VDGGLWLS+PRHLPKEAV+Q+SRA+EKRSR +PVG+P SKL Sbjct: 255 TMVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298 The following BLAST results are available for this feature:
BLAST of GR404278 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 1
BLAST of GR404278 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR404278 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR404278 ID=GR404278; Name=GR404278; organism=Cicer arietinum; type=EST; length=462bpback to top |