HO067841
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO067841 vs. TrEMBL
Match: D7U4M0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023822001 PE=4 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.309e-7 Identity = 28/48 (58.33%), Postives = 32/48 (66.67%), Query Frame = -3 Query: 44 MGSACCVAAKDRRDLESV------HRDVVCSPPWSFRWDSRGRVTGEI 169 MGSACCVAA+DR HR+V SP WSFRWD+RGRV GE+ Sbjct: 1 MGSACCVAARDRTITNGPSCEVMQHRNVRYSPSWSFRWDNRGRVAGEV 48
BLAST of HO067841 vs. TrEMBL
Match: B9RH88_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1448750 PE=4 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 5.644e-7 Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = -3 Query: 47 MGSACCVAAKDRRDL-----ESVHRDVVCSPPWSFRWDSRGRVTGE 169 MG ACCVAA+D+ + E +HR++ SP WSFRWD+RGRV GE Sbjct: 1 MGGACCVAARDKNIVNGPGSEILHRNIRHSPTWSFRWDNRGRVAGE 46
BLAST of HO067841 vs. TrEMBL
Match: B9HRJ8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_821161 PE=4 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 9.627e-7 Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = -3 Query: 47 MGSACCVAAKDRRDLES-----VHRDVVCSPPWSFRWDSRGRVTGE 169 MG ACCVAA+D+ + +HR++ SP WSFRWD+RGRV GE Sbjct: 1 MGGACCVAARDKNIVSGPGGDILHRNIRYSPSWSFRWDNRGRVAGE 46
BLAST of HO067841 vs. TAIR peptide
Match: AT1G75400.1 (| Symbols: | RING/U-box superfamily protein | chr1:28297609-28299464 FORWARD LENGTH=455) HSP 1 Score: 53.5286 bits (127), Expect = 7.274e-8 Identity = 28/53 (52.83%), Postives = 31/53 (58.49%), Query Frame = -3 Query: 32 MGSACCVAAKDRR-------DLESVHRDVVCSPPWSFRWDSRGRVTGEIRILP 169 MGS CCVA KDR+ SVHR+ CSP WSFR D+R RV EI P Sbjct: 1 MGSVCCVAVKDRKVPPSGGPASSSVHRNSACSPQWSFRRDNRRRVADEIEGSP 53
BLAST of HO067841 vs. TAIR peptide
Match: AT1G19680.1 (| Symbols: | RING/U-box superfamily protein | chr1:6805909-6807682 FORWARD LENGTH=444) HSP 1 Score: 52.373 bits (124), Expect = 1.620e-7 Identity = 25/43 (58.14%), Postives = 28/43 (65.12%), Query Frame = -3 Query: 41 MGSACCVAAKDRRDLESVHRDVVCSPPWSFRWDSRGRVTGEIR 169 MGS CCVAAKDR + VCSP WSFR D+R RV EI+ Sbjct: 1 MGSVCCVAAKDRNVPSGAIDNSVCSPSWSFRRDNRRRVADEIK 43
BLAST of HO067841 vs. TAIR peptide
Match: AT4G39140.5 (| Symbols: | RING/U-box superfamily protein | chr4:18229637-18231282 REVERSE LENGTH=429) HSP 1 Score: 50.447 bits (119), Expect = 6.158e-7 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = -3 Query: 47 MGSACCVAAKDRRDL------ESVHR-DVVCSPPWSFRWDSRGRVTGE 169 MG+ACCVAA+D+ + E++ R ++ SP WSFRWD+RGRV GE Sbjct: 1 MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGE 48
BLAST of HO067841 vs. TAIR peptide
Match: AT4G39140.4 (| Symbols: | RING/U-box superfamily protein | chr4:18229637-18231282 REVERSE LENGTH=429) HSP 1 Score: 50.447 bits (119), Expect = 6.158e-7 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = -3 Query: 47 MGSACCVAAKDRRDL------ESVHR-DVVCSPPWSFRWDSRGRVTGE 169 MG+ACCVAA+D+ + E++ R ++ SP WSFRWD+RGRV GE Sbjct: 1 MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGE 48
BLAST of HO067841 vs. TAIR peptide
Match: AT4G39140.3 (| Symbols: | RING/U-box superfamily protein | chr4:18229637-18231282 REVERSE LENGTH=429) HSP 1 Score: 50.447 bits (119), Expect = 6.158e-7 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = -3 Query: 47 MGSACCVAAKDRRDL------ESVHR-DVVCSPPWSFRWDSRGRVTGE 169 MG+ACCVAA+D+ + E++ R ++ SP WSFRWD+RGRV GE Sbjct: 1 MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGE 48
BLAST of HO067841 vs. TAIR peptide
Match: AT4G39140.2 (| Symbols: | RING/U-box superfamily protein | chr4:18229637-18231282 REVERSE LENGTH=429) HSP 1 Score: 50.447 bits (119), Expect = 6.158e-7 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = -3 Query: 47 MGSACCVAAKDRRDL------ESVHR-DVVCSPPWSFRWDSRGRVTGE 169 MG+ACCVAA+D+ + E++ R ++ SP WSFRWD+RGRV GE Sbjct: 1 MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGE 48
BLAST of HO067841 vs. TAIR peptide
Match: AT4G39140.1 (| Symbols: | RING/U-box superfamily protein | chr4:18229637-18231282 REVERSE LENGTH=429) HSP 1 Score: 50.447 bits (119), Expect = 6.158e-7 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = -3 Query: 47 MGSACCVAAKDRRDL------ESVHR-DVVCSPPWSFRWDSRGRVTGE 169 MG+ACCVAA+D+ + E++ R ++ SP WSFRWD+RGRV GE Sbjct: 1 MGNACCVAARDKMVVPNSSAGENLQRSNIRHSPSWSFRWDNRGRVAGE 48 The following BLAST results are available for this feature:
BLAST of HO067841 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 3
BLAST of HO067841 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 7
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO067841 ID=HO067841; Name=HO067841; organism=Cicer arietinum; type=EST; length=510bpback to top |