Psat4g002160.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Psat4g002160.1 vs. DB:Swiss
Match: PP314_ARATH (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3) HSP 1 Score: 872.078 bits (2252), Expect = 0.000e+0 Identity = 419/670 (62.54%), Postives = 528/670 (78.81%), Query Frame = 1 Query: 91 RNFPSSLTP-----LSKTILQSNHVSLQEPIPQQQSQD-------DPALGNSNNCVWVNPKSARAKQFGKKSYNARYNXXXXXXXXXXXCHPTQEDVSRVFESSGDDIIEQDAVIIINNMENSAVAPFVLRYIQSKIRANREAILYNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTIISCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVMTQTPKEELGKLIDCVEKANPKLGSVVRYLVDGPE-GDGEFRIDASEIFGSVTDGVRRAFCNSLIDLCVNLDLLDKACVLLDLGLTLEIYTDIQSKSQTQWSLHLRGLSVGAALTAFHVWINDLSK-SFESGEDLPPLLGINTGHGKHRYSEKGLAGVIESHMNELNAPFRESPDKAGWFLTTQVAVSSWIKSRDSSKLVSA 2058
R+F SS P S+ +LQ+ HVS+QE IPQ + P S + VWVNPKS RA Q +KSY++RY+SL+KL++SLD+C P + DV V G + EQDAV+ +NNM N AP VL + ++ +RE ILYNVT+KVFRK KDL+ +EK+FDEM++RG+KP N TF+TIISCAR +P +AVEWFEKM SFGC PD+VT++ MIDAYG+ G+V MA+SLYDRARTEKWR+D VTFSTLI++YGV+GNYDGCLN+YEEMKALGVKPNLV+YN L+D+MGRAKRPWQAK IY++LI NG PN +TY +L+ AYGRARY DDAL +Y+EMKEKG+ L LYNTLL+MCAD + D+AFEIF+DMK+C+TC PDSWTFSSLIT+Y+C G V+EAE + +M E+GFEPT++VLTS++QCYGKAK+ DDVV+TF+Q+L++GI PDD+FC CLLNVMTQTP EE+GKLI CVEKA PKLG VV+ LV+ +G F+ +ASE+ S+ V++A+ N LIDLCVNL+ L++AC +L LGL +IYT +QSKS TQWSLHL+ LS+GAALTA HVW+NDLS+ + ESGE+ PPLLGINTGHGKH+YS+KGLA V ESH+ ELNAPF E+PDK GWFLTT VA +W++SR S+ VSA
Sbjct: 33 RSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQSEKSKLVDVDLPIPEPTASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLDACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGVFKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQWSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFESHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702
BLAST of Psat4g002160.1 vs. DB:Swiss
Match: ATP4_ORYSJ (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1) HSP 1 Score: 674.855 bits (1740), Expect = 0.000e+0 Identity = 314/561 (55.97%), Postives = 416/561 (74.15%), Query Frame = 1 Query: 382 EQDAVIIINNME-NSAVAPFVLRYIQSKIRANREAILYNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTIISCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMK-SCDTCS-PDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVMTQTPKEELGKLIDCVEKANPKLGSVVRYLVDGPEGDGEFRIDASEIFGSVTDGVRRAFCNSLIDLCVNLDLLDKACVLLDLGLTLEIYTDIQSKSQTQWSLHLRGLSVGAALTAFHVWINDLSKSFESGEDLPPLLGINTGHGKHRYSEKGLAGVIESHMNELNAPFRESPDKAGWFLTTQVAVSSWIKSRDSSKLVS 2055
EQDAVI++N A L + +E ILYNV LK RK + AE +++EM++ GV+P N TFST+ISCAR+C +P KAVEWFEKM FGC PD +T S +IDAYG+ GD A+ LYDRAR EKW+LD V +T+I+++ +GN+DG LNV+EEMKA GVKPNLVVYNT+LDAMGRA RPW K I+REL+ PN+ATY L+HAY RARY +DA+ VY+ MK++ MD++ LYN LL+MCADIG+ ++A EIF DMK S D+ S PDSW++SS++T+YSC G VA AE ++ EM+E+GF+P I++LTSL++CYGKA R DDVV++F L D+GI PDD+FC CLL V TP +ELGK+I C+++++ +LG+VVR LVD R A E+ G VR +CN L+DL VNL ++KAC LLD+ L L IY+++Q+++QTQWSLHLRGLSVGAALT HVW++DL + ++G++LPPLLGI+TG GK+ YS KGLA V ESH+ EL+APF E+PDKAGWFLTT VA W++++ S++LV+
Sbjct: 115 EQDAVIVLNTTSARPAAVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLREGVQPDNATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETALRLYDRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGRAMRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVLYNMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILNEMVEAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLTVAAGTPADELGKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVRMPYCNCLMDLAVNLSQMEKACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTLHVWMSDLYAALQAGDELPPLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAGWFLTTSVAARHWLETKKSAELVA 675
BLAST of Psat4g002160.1 vs. DB:Swiss
Match: ATP4_MAIZE (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1) HSP 1 Score: 655.981 bits (1691), Expect = 0.000e+0 Identity = 334/672 (49.70%), Postives = 455/672 (67.71%), Query Frame = 1 Query: 91 RNFPSSLTPLSKTILQSNHVSLQEPIPQQQSQDDPALGNSNNC----------VWVNPKSARAKQFGKKSYNARYNXXXXXXXXXXX-CHPTQEDVSRVFESS-GDDIIEQDAVIIINNMENSAVAPFVL--RYIQSKIRANREAILYNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTIISCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSC--DTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVMTQTPKEELGKLIDCVEKANPKLGSVVRYLVDGPEGDGEFRIDASEIFGSVTDGVRRAFCNSLIDLCVNLDLLDKACVLLDLGLTLEIYTDIQSKSQTQWSLHLRGLSVGAALTAFHVWINDLSKSFESG-EDLPPLLGINTGHGKHRYSEKGLAGVIESHMNELNAPFRESPDKAGWFLTTQVAVSSWIKSRDSSKLVS 2055
R +S P + + + HVS+QE PQ Q P+ N N +WVNP S RA + + + L + + C T+ V +++ + EQDAVI++N + VL R+ + ++ ILYNV LK+ RK + E ++ EM++ GV+P N TFST+ISCAR+C L +KAVEWF+KM FGC PD +T S +IDAYG G+ A+ LYDRAR EKW+LD V ST+IK++ +GN+DG LNV+EEMKA+GV+PNLVVYNT+LDAMGRA RPW K I+RE++ + P+RATY L+HAY RARY +DA+ VY+ MK++ M ++ LYN LL+MCADIG+ D+A EIF DMK+ PDSW++SS++T+YS V AE ++ EM+E+GF+P I+VLTSL++CYGK R DDVV++F L D+GI PDD+FC CLL+V TP EELGK+I C+E++N +LG+VV+ LVD + FR A E+ S V+ +CN L+DLCVNL+ ++KAC LLD L IY +IQ+++QTQWSLHLRGLSVGAALT HVW+NDL S ++G E LPPLLGI+TG GK+ YS++GLA + E+H+ EL+APF E+PDKAGWFLTT VA W++S+ +S+LV+
Sbjct: 20 RPISASFNPKNPSSPVAAHVSVQETPPQPQDPSPPSDSNPNGTRPSSSSNTRFLWVNPNSPRAADVARARAGSGRRARLASAAAALGACETTESAVEAALQAAFPEPPSEQDAVIVLNTAAATRAETAVLALRWFLGNAKVRKKVILYNVVLKLLRKKRLWSETEALWAEMLRDGVQPDNATFSTVISCARACGLHSKAVEWFDKMPEFGCSPDMLTYSAVIDAYGHAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHSTSGNFDGALNVFEEMKAIGVRPNLVVYNTMLDAMGRALRPWVVKTIHREMVDQQVQPSRATYCCLLHAYTRARYGEDAMAVYRLMKDEAMGIDVMLYNMLLSMCADIGYVDEAEEIFRDMKASMGAHSKPDSWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIFVLTSLIRCYGKVGRTDDVVRSFGMLQDLGIIPDDRFCGCLLSVAANTPAEELGKVISCIERSNVQLGAVVKLLVDRSSSES-FREAARELLRSSRGVVKMPYCNCLMDLCVNLNQMEKACALLDAAQQLGIYANIQTRTQTQWSLHLRGLSVGAALTTLHVWMNDLYTSLQTGNEGLPPLLGIHTGQGKNTYSDRGLAAMFEAHLKELDAPFHEAPDKAGWFLTTNVAAKQWLESKAASELVT 690
BLAST of Psat4g002160.1 vs. DB:Swiss
Match: PP420_ARATH (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1) HSP 1 Score: 442.965 bits (1138), Expect = 3.692e-145 Identity = 255/662 (38.52%), Postives = 386/662 (58.31%), Query Frame = 1 Query: 85 KLRNFPSSLTPLSKTILQSNHVSLQEPIPQQQSQDDPALGNSNNCVWVNP----KSARAKQFGKKS---YNARYNXXXXXXXXXXXCHPTQEDVSRVFESSGDDIIE----QDAVIIINNMENSAVAPFVLRYIQSKIRANREAILYNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTIISCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVMTQ-TPKEELGKLIDCVEKANPKLGSVVRYLVDGPEGDGEFRIDASEIFGSVTDGVRRAFCNSLIDLCVNLDLLDKACVLLDLGLTLEIYTDIQSKSQTQWSLHLRGLSVGAALTAFHVWINDLSKSFESGEDLPPLLGINTGHGKHRYSEKGLAGVIESHMNELNAPFRESPDKAGWFLTTQVAVSSWIKSR 2034
K + L PLS T L+ Q+Q+Q + + VWVNP +S + Q K+S YN + L + L+S T++ F S D+I +A++++N++ +++SK E I YNVT+K R + E++ EMVK GV+ N+T+STII+CA+ C L NKA+EWFE+M G +PD+VT S ++D Y K G V +SLY+RA W+ D + FS L KM+G AG+YDG V +EMK++ VKPN+VVYNTLL+AMGRA +P A++++ E+++ GL PN T +L+ YG+AR+ DAL +++EMK K ++ LYNTLL MCADIG ++A +F DMK C PD++++++++ IY G+ +A + EM+++G + + T LVQC GKAKR DDVV F+ + G++PDD+ C CLL+VM E+ K++ C+E+AN KL + V +VD + + + + RR FCN LID+C + ++A LL LG +Y + +K+ +WSL +R LSVGAA TA W+ L+ + E+LP L TG G HR+S+ GLA H+ +L+APFR+S D+ G F+ T+ + SW++S+
Sbjct: 61 KTPSLSEQLKPLSATTLR-----------QEQTQ----ILSKPKSVWVNPTRPKRSVLSLQRQKRSAYSYNPQIKDLRAFALKLNSSIFTEKSE---FLSLLDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFLAQTGTGTHRFSQ-GLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESK 702
BLAST of Psat4g002160.1 vs. DB:Swiss
Match: PPR49_ARATH (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana OX=3702 GN=At1g18900 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 9.865e-43 Identity = 131/522 (25.10%), Postives = 240/522 (45.98%), Query Frame = 1 Query: 490 YNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTII-SCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCY--GKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVMTQTPKEELGKLIDCVEKANPKLGSVVRYLVDGPEGDGEFRIDAS---EIFGSVTDGVRRAFCNSLIDLCVNLDLLDKACVLLDLGLTLEIYTD-IQSKSQTQWSLHLRGLSVGAALTAFHVWINDLSKSFESGEDLPPLLGINTGHGKHRYSEKGLAGV---IESHMNELNAPFRESPDKAGWFLTTQVAVSSWI 2025
Y + + K K+ DEMV+ G +P VT++ +I S R+ YL N+A+ F +MQ GC PD VT +ID + K G + +AM +Y R + D T+S +I G AG+ ++ EM G PNLV YN ++D +A+ A +YR++ G P++ TY ++ G Y ++A V+ EM++K + +Y L+ + G ++A++ ++ M P+ T +SL++ + + ++AEA ++ M+ G P++ T L+ C G++K LDMG FC G+L+ +P +++ GP+G+ R A+ ++ S +R ++++D ++A + ++ ++ D ++ KS + W ++L +S G A+TA + K + P + I TG G+ R G + V +E +N +PF +G F+ + ++ W+
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL-NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG-LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK------------LDMG------FC---------------GQLM--ASTGHPAHMFLLKMPAAGPDGE-NVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGR-RSRVTGTSMVRQAVEELLNIFGSPFFTESGNSGCFVGSGEPLNRWL 849 HSP 2 Score: 103.605 bits (257), Expect = 1.713e-21 Identity = 84/316 (26.58%), Postives = 139/316 (43.99%), Query Frame = 1 Query: 241 ARAKQFGKKSYNARYNXXXXXXXXXXXCHPTQEDVSRVFESSGDDIIEQDAVIIINNMENSAVAPFVLRYIQSKIRANREAILYNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTIISC-ARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCA------DIGFTDQ 1167
RAKQFG + L D C P +R+ S G +A+ + N M+ + P + + Y + + K LD A ++ M G+ P T+S II+C ++ +LP A + F +M GC P+ VT ++M+D + K + A+ LY + + D VT+S ++++ G G + V+ EM+ P+ VY L+D G+A +A Y+ ++ GL PN T SL+ + R +A + + M G+ + Q Y LL+ C D+GF Q
Sbjct: 375 GRAKQFGAIN-------KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP--------------DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP-AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQ 668
BLAST of Psat4g002160.1 vs. DB:Swiss
Match: PP123_ARATH (Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana OX=3702 GN=At1g74750 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.846e-42 Identity = 134/550 (24.36%), Postives = 243/550 (44.18%), Query Frame = 1 Query: 400 IINNMENSAVAPFVLRYIQSKIRANREAILYNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTII-SCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVMTQTPKEELGKLIDCVEKANPKLGSVVRYLVDGPEGDGEFRIDAS---EIFGSVTDGVRRAFCNSLIDLCVNLDLLDKACVLLDLGLTLEIYTD-IQSKSQTQWSLHLRGLSVGAALTAFHVWINDLSKSFESGEDLPPLLGINTGHGKHRYSEKGLAGV---IESHMNELNAPFRESPDKAGWFLTTQVAVSSWI 2025
++ M+N A A +++ + + Y + + K K+ DEMV+ G KP VT++ +I S R+ YL +A+ F +MQ GC PD VT +ID + K G + +AM +Y R + D T+S +I G AG+ ++ EM G PNLV +N ++ +A+ A +YR++ G P++ TY ++ G + ++A V+ EM+ K + +Y L+ + G D+A++ ++ M P+ T +SL++ + + ++EA ++ M+ G P++ T L+ C A+ N DMG FC L+ V +P +++ GP+G + R S + S +R ++++D L ++A + ++ +Y D ++ KS + W ++L +S G A+ A + K D P + I TG G+ R G + V +E +N N PF +G F+ + + +W+
Sbjct: 332 VLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL-KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG-LRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSN----------FDMG------FCGQLMAV-----------------SGHPAHMFLLKMPPAGPDGQ-KVRDHVSNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAVIALSRTLAWFRKQMLVSGDCPSRIDIVTGWGR-RSRVTGTSMVRQAVEELLNIFNFPFFTENGNSGCFVGSGEPLKNWL 844
BLAST of Psat4g002160.1 vs. DB:Swiss
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.080e-40 Identity = 137/575 (23.83%), Postives = 265/575 (46.09%), Query Frame = 1 Query: 412 MENSAVAPFVLRYIQSKIRANREAILYNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTIISCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLL-AMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITI------------YSCIGEVAEAERMMTEMIESGFEPTIYVLTSLV---------QCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVMTQ-TPKEELGKLIDCVEKANPKLGSVVRYLVDGPEGDGEFRIDASEIFGSVT--DG-VRRAFCNSLIDLCVNLDLLDKACVLLDLGLTLEIYTDIQSKSQTQWSLHLRGLSVGAALTAFHVWINDLSKSFESGEDLPPLLGINTGHGKHR--YSEKGLAGVIESHMNELNAPFRESPDKAGWFLTTQVAVSSWIKSRDSSKLV 2052
ME VA F ++ ++ +R I +N L V + + A +FDEM R ++ +++T++ + A E +M +P+ V+ S +ID + K G A++L+ R LD V+++TL+ +Y G + L++ EM ++G+K ++V YN LL G+ + + K ++ E+ + + PN TY +LI Y + +A+ +++E K G+ + LY+ L+ A+C + G A + ++M + + SP+ T++S+I YS G + + ++ + E+ I + L C + +++ F ++ + I+P+ +LN ++ E+ L++ + + K+ VV L+ G + + A +F V DG AF N+L D+ + A ++ G + +++ ++ S S L L +S GAA H W+ ++ G +LP +L I TG GKH + L +E + ++APF S G F ++ V++W++ + KL+
Sbjct: 318 MEFKQVAKFFDEMQRNGVQPDR--ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN-GLVGSAVSLIDEM-TKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQREN--VWLQAQSLFDKVNEMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDS----CLDLHLMSSGAARAMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLL 882 HSP 2 Score: 119.783 bits (299), Expect = 1.435e-26 Identity = 96/340 (28.24%), Postives = 160/340 (47.06%), Query Frame = 1 Query: 703 SVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPW-QAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVMTQTPKEELGKLIDCVEKANPKLGSVVRY--LVDGPEGDGEFRIDASEIFGSVTDGVRRA---FCNSLID-LCVNLDLLDKACVLLD 1701
S MI G+ G V +A +++ A + FS LI YG +G ++ ++V+ MK G++PNLV YN ++DA G+ + Q + E+ +NG+ P+R T+ SL+ R + A ++ EM + ++ + YNTLL G D AFEI M P+ ++S++I ++ G EA + EM G +L+ Y K R+++ + ++ +GI+ D LL + K + K + K L +++ Y L+DG G ++ +A EIF RA ++LID LC N L+ A L+D
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP-VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK-EAMEIFREFKSAGLRADVVLYSALIDALCKN-GLVGSAVSLID 573 HSP 3 Score: 115.931 bits (289), Expect = 2.207e-25 Identity = 74/298 (24.83%), Postives = 143/298 (47.99%), Query Frame = 1 Query: 538 AEKVFDEMVKRGVKPGNVTFSTII-SCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPD 1428
A VF+ M + G++P VT++ +I +C + + ++F++MQ G PD +T + ++ + G A +L+D + D +++TL+ G D + +M + PN+V Y+T++D +A R +A ++ E+ G+ +R +Y +L+ Y + ++AL + +EM G+ + YN LL G D+ ++F +MK + P+ T+S+LI YS G EA + E +G + + ++L+ K V +++ GI P+
Sbjct: 287 AISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR-EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPN 583
BLAST of Psat4g002160.1 vs. DB:Swiss
Match: PP241_ARATH (Pentatricopeptide repeat-containing protein At3g18110, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB1270 PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 9.545e-40 Identity = 86/277 (31.05%), Postives = 153/277 (55.23%), Query Frame = 1 Query: 637 NKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVA--MAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVM 1461
+KA E + M+ GC+PD ++ + +I+A K G + +A+ L D R R D +T++TL+ N DG + V+E+M+A +P+L YN ++ GR +A+ ++ EL G FP+ TY SL++A+ R R + VY++M++ G + YNT++ M G D A ++++DMK +PD+ T++ LI EA +M+EM++ G +PT+ ++L+ Y KA + ++ TF+ +L G +PD+ +L+V+
Sbjct: 242 SKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVL 518 HSP 2 Score: 154.836 bits (390), Expect = 1.334e-37 Identity = 135/615 (21.95%), Postives = 267/615 (43.41%), Query Frame = 1 Query: 322 CHPTQEDVSRVFESSGDDIIEQDAVIIINNMENSAVAPFVLRYIQSKIRANREAILYNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTIISCARSCYLPNKAVEWF---EKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYD-------------------------RARTEK----------WRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVMT-QTPKEELGKLIDCVEKANPKLGSVVRYLVDGP-----EGDGEFRIDASEIFGSVTDGVRRAFCNSLIDLCVNLDLLDKACVLLDLGLTLEIYT-DIQSKSQTQWSLHLRGLSVGAALTAFHVWINDLS-KSFESGEDLPPLLGINTGHGKHRYSEKGLAGVIESHMNELNAPFRESPDKAGWFLTTQVAVSSWIK 2028
C P D+ E+ G + Q A ++ N+ S P + +N + + +C + A +F+ M++ G P T +I + + + E + E++Q G ++ +M+DA+ + G++ +Y R R + ++++ +++++KMY +Y + VY+ +K G++P+ YNTL+ R +RP + + +++ GL P TY SLI A+G+ + + A +++E+ KG+ L+ Y+T++ + D G +A ++ + MK+ P T L+ YS G EAE++++ + ++ E T +S++ Y ++K + ++ ++ G+EPD + C + + K E+ L+ +E L +R L P E DG F E S+ D F N+L++L +L A + LG+ I++ D+ + W R LS GAAL A +W++ + S E + P + + TG + Y+ L +++ + E+ +PF + G + ++ W+K
Sbjct: 751 CSPMYTDI---IEAYGKQKLWQKAESVVGNLRQSGRTP--------------DLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSP---TVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG-IEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFDLP--IRLLAGRPELLVSEVDGWF-----EKLKSIEDNAALNFVNALLNLLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALVALTLWLDHMQDASLEGYPESPKSVVLITGTAE--YNGISLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHSLRMWLK 1335 HSP 3 Score: 120.168 bits (300), Expect = 1.688e-26 Identity = 81/287 (28.22%), Postives = 144/287 (50.17%), Query Frame = 1 Query: 391 AVIIINNMENSAVAPFVLRYIQSKIRANREAILYNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTIISCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKAL-GVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITI 1248
AV +++ + NS + P +AI YN L + +LDGA KVF++M +P T++ +IS C L +A F +++ G PD VT + ++ A+ + + +Y + + + D +T++T+I MYG G D L +Y++MK L G P+ + Y L+D++G+A R +A A+ E++ G+ P TY +LI Y +A ++A + M G + Y+ +L + T +A+ ++ DM S D +P S+T L+ +
Sbjct: 281 AVELLDMVRNSGLRP--------------DAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMIS-DGHTP-SYTLYELMIL 551 HSP 4 Score: 78.9518 bits (193), Expect = 9.302e-14 Identity = 62/305 (20.33%), Postives = 141/305 (46.23%), Query Frame = 1 Query: 586 NVTFSTIISCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLD-NVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVMTQTPKEELGKLI 1497
+ + T++ C + +A + F ++ GC + M+ Y KLG A + ++A T+ + + ++ +I+ YG + +V ++ G P+L +N+L+ A + +A+AI+ ++++G P + L+HA ++ +V +E+++ G ++ +L A G + +I+ MK+ P + +I + V +AE M++EM E+ F+ + + S+++ Y + V+ + ++ + G+EPD+ L+ + + + E G L+
Sbjct: 681 STMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL-PTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLL 984
BLAST of Psat4g002160.1 vs. DB:Swiss
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.943e-40 Identity = 93/328 (28.35%), Postives = 164/328 (50.00%), Query Frame = 1 Query: 478 EAILYNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTIISCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVM 1461
+ + YN L V+ K A KV +EMV G P VT++++IS + ++A+E +M G PD T + ++ + + G V AMS+++ R + + TF+ IKMYG G + + +++E+ G+ P++V +NTLL G+ + +++E+ + G P R T+ +LI AY R + A+ VY+ M + G+ + YNT+LA A G +Q+ ++ +M+ C P+ T+ SL+ Y+ E+ + E+ EP +L +LV K + + F++L + G PD + LN M
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED-GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD----ITTLNSM 635 HSP 2 Score: 147.517 bits (371), Expect = 1.728e-35 Identity = 90/325 (27.69%), Postives = 164/325 (50.46%), Query Frame = 1 Query: 496 VTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTIISCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAM-SLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVMTQ 1467
+ + + K + A +F+ + + G +++++IS + +AV F+KM+ GC P +T +V+++ +GK+G + SL ++ +++ D T++TLI + V+EEMKA G + V YN LLD G++ RP +A + E++ NG P+ TY SLI AY R D+A+ + +M EKG + Y TLL+ G + A IFE+M++ C P+ TF++ I +Y G+ E ++ E+ G P I +L+ +G+ + +V F ++ G P+ + L++ ++
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501 HSP 3 Score: 134.42 bits (337), Expect = 2.417e-31 Identity = 71/277 (25.63%), Postives = 147/277 (53.07%), Query Frame = 1 Query: 640 KAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPW-QAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVMTQ 1467
+A +WF K + + + D+ ++++I GK G V+ A ++++ + + + LD ++++LI + +G Y +NV+++M+ G KP L+ YN +L+ G+ PW + ++ ++ +G+ P+ TY +LI R +A V++EMK G + YN LL + +A ++ +M + SP T++SLI+ Y+ G + EA + +M E G +P ++ T+L+ + +A + + + F ++ + G +P+ +C N +
Sbjct: 156 RAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM-VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN----ICTFNAFIK 427 HSP 4 Score: 131.339 bits (329), Expect = 2.498e-30 Identity = 85/324 (26.23%), Postives = 154/324 (47.53%), Query Frame = 1 Query: 484 ILYNVTLKVFRKC-KDLDGAEKVFDEMVKRGVKPGNVTFSTIISCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDD-QFCVCL 1449
I YNV L VF K + + ++M G+ P T++T+I+C + L +A + FE+M++ G D VT + ++D YGK AM + + + VT+++LI Y G D + + +M G KP++ Y TLL RA + A +I+ E+ G PN T+ + I YG + + ++ E+ G+ + +NTLLA+ G + +F++MK P+ TF++LI+ YS G +A + M+++G P + +++ + + K ++ D +P++ +C L
Sbjct: 244 ITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566 HSP 5 Score: 102.834 bits (255), Expect = 2.545e-21 Identity = 69/313 (22.04%), Postives = 146/313 (46.65%), Query Frame = 1 Query: 490 YNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTIISCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPD 1428
+N +K++ K+FDE+ G+ P VT++T+++ + ++ F++M+ G +P+ T + +I AY + G AM++Y R D T++T++ G ++ V EM+ KPN + Y +LL A K ++ E+ + P +L+ + +A + E+KE+G + N+++++ +A + + MK +P T++SL+ ++S + ++E ++ E++ G +P I +++ Y + R D + F+++ + GI PD
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKE-RGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733 HSP 6 Score: 96.2857 bits (238), Expect = 3.576e-19 Identity = 60/250 (24.00%), Postives = 118/250 (47.20%), Query Frame = 1 Query: 466 RANREAILYNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTIISCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSP 1215
R + Y L + K++ + +E+ ++P V T++ C L +A F +++ G PD TL+ M+ YG+ VA A + D + + T+++L+ M+ + ++ + E+ A G+KP+++ YNT++ A R R A I+ E+ +G+ P+ TY + I +Y ++A+ V + M + G N YN+++ + D+A ED+++ D +P
Sbjct: 554 RCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAP 803
BLAST of Psat4g002160.1 vs. DB:Swiss
Match: PP327_ARATH (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.572e-36 Identity = 100/365 (27.40%), Postives = 171/365 (46.85%), Query Frame = 1 Query: 388 DAVIIINNMENSAVAPFVLRYIQSKIRANREAILYNVTLKVFRKCKDLDGAEKVFDEMVKRGVKPGNVTFSTIIS--CARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMI---ESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLLNVMTQ 1467
+AV++++ M++ +P ++YNV + K DL K+ D M +G P VT++T+I C + +KAV E+M S C+P+DVT +I+ K A+ L + L+ +S LI G + ++++ +M G KPN+VVY+ L+D + R +P +AK I +I +G PN TY SL+ + + C++A+ V+KEM + G N Y+ L+ +G +A ++ M + PD+ +SS+I IG + A ++ EM+ E +P + L+ K V N +LD G +PD C LN +++
Sbjct: 240 EAVLLLDEMQSEGCSP--------------SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL--DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI-KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587 HSP 2 Score: 111.309 bits (277), Expect = 4.736e-24 Identity = 86/368 (23.37%), Postives = 164/368 (44.57%), Query Frame = 1 Query: 376 IIEQDAVIIIN-----NMENSAVAPFVLRYIQSKIRANREAILYNVTLKVFRK----CKDLDGAEKVFDEMVKRGVKPGNVTFSTIISCARSCYLPNKAVEWFEKMQSFGCLPDDVTLSVMIDAYGKLGDVAMAMSLYDRARTEKWRLDNVTFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQAKAIYRELIKNGLFPNRATYGSLIHAYGRARYCDDALIVYKEMKEKGMDLNTQLYNTLLAMCADIGFTDQAFEIFEDMKSCDTCSPDSWTFSSLITIYSCIGEVAEAERMMTEMIESGFEPTIYVLTSLVQCYGKAKRNDDVVKTFNQLLDMGIEPDDQFCVCLL 1452
IIE+ +++ ++ + AV F + + R R +N L V + L+ + V + + + P ++F+ +I ++A+E F M CLPD T ++D K + A+ L D ++E V ++ LI G+ + + M G PN V YNTL+ + + +A ++ ++ + PN TYG+LI+ + R DA+ + M+E+G LN +Y+ L++ G ++A ++ M C P+ +S L+ G+ EA+ ++ MI SG P Y +SL++ + K ++ V+ + ++ G ++FC +L
Sbjct: 110 IIERSFIVVFRAYGKAHLPDKAVDLF--HRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE-KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS-RNKFCYSVL 473 The following BLAST results are available for this feature:
BLAST of Psat4g002160.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g002160.1_Ps_Cameor_v1a ID=Psat4g002160.1_Ps_Cameor_v1a; Name=Psat4g002160.1; organism=Pisum sativum; type=mRNA; length=2061bpback to top protein sequence of Psat4g002160.1_Ps_Cameor_v1a >Psat4g002160.1_Ps_Cameor_v1a ID=Psat4g002160.1_Ps_Cameor_v1a; Name=Psat4g002160.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=687bpback to top mRNA from alignment at chr4LG4:1988581..1990641+ Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below.>Psat4g002160.1_Ps_Cameor_v1a ID=Psat4g002160.1_Ps_Cameor_v1a; Name=Psat4g002160.1; organism=Pisum sativum; type=mRNA; length=2061bp; location=Sequence derived from: chr4LG4:1988581..1990641+ (Pisum sativumback to top Coding sequence (CDS) from alignment at chr4LG4:1988581..1990641+ >Psat4g002160.1_Ps_Cameor_v1a ID=Psat4g002160.1_Ps_Cameor_v1a; Name=Psat4g002160.1; organism=Pisum sativum; type=CDS; length=4122bp; location=Sequence derived from: chr4LG4:1988581..1990641+ (Pisum sativumback to top |