Psat4g002520.2
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat4g002520.2 vs. DB:Swiss
Match: SCL13_ARATH (Scarecrow-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=SCL13 PE=2 SV=2) HSP 1 Score: 617.846 bits (1592), Expect = 0.000e+0 Identity = 309/505 (61.19%), Postives = 374/505 (74.06%), Query Frame = 1 Query: 124 GFSFETNKEQCFPVESYPEIVGFMDCDSPSYASVSSNKSPFSPQDSQSCYSDHHQSSDNTYGSPISGMSSVD-DGNDLKHKLRELENSLLGPDDFDIVDSYGSSMEASLHGACPSG--RYNWDLIAENIPKLDMKEVLLLCAQAVSDGDIPTARGWMDNVLVKMVSVTGEPIQRLSAYLLEGLRARLESSGILIYKALKCEQPTSKELMSYMHVLYQICPYFKFAYISANAVIHETMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRVTGVDDSQSFHARGGGLQIVGQRLSDFARSCGVPFEFHSAAMSGCEVQQENLSIRPGEALAVNFPYILHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGIERVERHELFGKWRSRFSMAGFKQCQLSSSVMHSVENMLKDFNQNYRLEHRDGALYLNWMKRAMATSSAWR 1629 GFS +KE F +ES DSPS S++S +SPFSPQ SQSC SD H S DN YGSP+SG+SS+ D +K K+RELE SLL G + G P+ +NWD + P+LD+KEVL+ A+AV+DGD TA G++D VL +MVSV+G PIQRL Y+ EGLRARLE SG IYK+LKC +PT +ELMSYM VLY+ICPY+KFAY +AN I E +A E+R+HIIDFQIAQG+Q+ LIQ LA RPGGPP +RVTGVDDSQS +ARGGGL +VG+RL+ A+SCGVPFEFH A MSGC+VQ+E+L + PG A+ VNFPY+LHHMPDESVS+ENHRDRLL L+KSLSPK+VTLVEQESNTNTSPF RFVET+DYYTAMFESID A +DDK+RIS EQ+CVARDIVNMIACE ERVERHE+ GKWR R MAGF +S+S + MLK +++NY+L +GALYL W +R MAT S W+ Sbjct: 33 GFSDIPSKENFFTLESSTASGSLPSYDSPS-VSITSGRSPFSPQGSQSCISDLHHSPDNVYGSPLSGVSSLAYDEAGVKSKIRELEVSLLS----------GDTKVEEFSGFSPAAGKSWNWDELLALTPQLDLKEVLVEAARAVADGDFATAYGFLD-VLEQMVSVSGSPIQRLGTYMAEGLRARLEGSGSNIYKSLKCNEPTGRELMSYMSVLYEICPYWKFAYTTANVEILEAIAGETRVHIIDFQIAQGSQYMFLIQELAKRPGGPPLLRVTGVDDSQSTYARGGGLSLVGERLATLAQSCGVPFEFHDAIMSGCKVQREHLGLEPGFAVVVNFPYVLHHMPDESVSVENHRDRLLHLIKSLSPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDAARPRDDKQRISAEQHCVARDIVNMIACEESERVERHEVLGKWRVRMMMAGFTGWPVSTSAAFAASEMLKAYDKNYKLGGHEGALYLFWKRRPMATCSVWK 525
BLAST of Psat4g002520.2 vs. DB:Swiss
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana OX=3702 GN=PAT1 PE=2 SV=1) HSP 1 Score: 531.176 bits (1367), Expect = 0.000e+0 Identity = 262/450 (58.22%), Postives = 334/450 (74.22%), Query Frame = 1 Query: 295 DNTYGSPISGMSSVDDGNDLKHKLRELENSLLGPDDFDIV----DSYGSSMEASLHGACPSGRYNWDLIAENIPKLDMKEVLLLCAQAVSDGDIPTARGWMDNVLVKMVSVTGEPIQRLSAYLLEGLRARLESSGILIYKAL-KCEQPTSKELMSYMHVLYQICPYFKFAYISANAVIHETMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRVTGVDDSQSFHARGGGLQIVGQRLSDFARSCGVPFEFHSAAMSGCEVQQENLSIRPGEALAVNFPYILHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGIERVERHELFGKWRSRFSMAGFKQCQLSSSVMHSVENMLKDFNQNYRLEHRDGALYLNWMKRAMATSSAWR 1629 D+T GS ++ D+ ND KHK+RE+E ++GPD D++ DS+ S+ ++G W E I + D++ L+ CA+A+S+ D+ A M+ L +MVSV+GEPIQRL AYLLEGL A+L SSG IYKAL +C +P S EL+SYMH+LY++CPYFKF Y+SAN I E M E+R+HIIDFQI QG+QW LIQA A RPGGPP IR+TG+DD S +ARGGGL IVG RL+ A+ VPFEF+S ++S EV+ +NL +RPGEALAVNF ++LHHMPDESVS ENHRDRLLR+VKSLSPKVVTLVEQESNTNT+ FF RF+ETM+YY AMFESIDV +D K+RI+ EQ+C+ARD+VN+IACEG +RVERHEL GKWRSRF MAGF LS V +++++L++++ YRLE RDGALYL WM R + S AW+ Sbjct: 55 DDTCGSCVT-----DELNDFKHKIREIETVMMGPDSLDLLVDCTDSFDSTASQEING--------WRSTLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEK-LRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490
BLAST of Psat4g002520.2 vs. DB:Swiss
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR2 PE=2 SV=1) HSP 1 Score: 524.628 bits (1350), Expect = 0.000e+0 Identity = 266/484 (54.96%), Postives = 343/484 (70.87%), Query Frame = 1 Query: 178 EIVGFMDCDSPSYASVSSNK-SPFSPQDSQSCYSDHHQSSDNTYGSPISGMSSVDDGNDLKHKLRELENSLLGPDDFDIVDSYGSSMEASLHGACPSGRYNWDLIAENIPKLDMKEVLLLCAQAVSDGDIPTARGWMDNVLVKMVSVTGEPIQRLSAYLLEGLRARLESSGILIYKALKCEQPTSKELMSYMHVLYQICPYFKFAYISANAVIHETMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRVTGVDDSQSFHARGGGLQIVGQRLSDFARSCGVPFEFHSAAMSGCEVQQENLSIRPGEALAVNFPYILHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGIERVERHELFGKWRSRFSMAGFKQCQLSSSVMHSVENMLKDFNQNYRLEHRDGALYLNWMKRAMATSSAW 1626 E G M DSPS S ++ SP S +DS S D+T GSP+ +D NDLK KL++LE +LGPD +IV+S +E S+ W + IP+ ++KE+L+ CA+AV + + A M L K+VSV+GEP++RL AY++EGL ARL SSGI IYKALKC++P S +L+SYMH LY+ CPYFKF Y+SAN I E + E RIHIIDF I+QG QW L+QALA RPGGPP +R+TG+DDS S +ARGGGL++VG+RLS A C VPFEFH A+SG +V+ +L + PGEALAVNF LHH+PDESVS NHRDRLLR+VKSLSPKV+TLVE ESNTNT+PF RF ET+DYYTA+FESID+ +DD++RI+ EQ+C+AR+IVN+IACEG ER ER+E FGKW++R +MAGF+ LSS V ++ +L+ ++ NY+L RDGALYL W R + SSAW Sbjct: 76 EGAGCMRHDSPSSQSFTTRSGSPLSQEDSHS---------DSTDGSPVGASCVTEDPNDLKQKLKDLEAVMLGPDS-EIVNS----LENSVANQLSLEPEKWVRMM-GIPRGNLKELLIACARAVEEKN-SFAIDMMIPELRKIVSVSGEPLERLGAYMVEGLVARLASSGISIYKALKCKEPKSSDLLSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDRIHIIDFHISQGAQWISLLQALAARPGGPPTVRITGIDDSVSAYARGGGLELVGRRLSHIASLCKVPFEFHPLAISGSKVEAAHLGVIPGEALAVNFTLELHHIPDESVSTANHRDRLLRMVKSLSPKVLTLVEMESNTNTAPFPQRFAETLDYYTAIFESIDLTLPRDDRERINMEQHCLAREIVNLIACEGEERAERYEPFGKWKARLTMAGFRPSPLSSLVNATIRTLLQSYSDNYKLAERDGALYLGWKSRPLVVSSAW 543
BLAST of Psat4g002520.2 vs. DB:Swiss
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=SCL5 PE=2 SV=1) HSP 1 Score: 512.301 bits (1318), Expect = 8.246e-176 Identity = 252/448 (56.25%), Postives = 324/448 (72.32%), Query Frame = 1 Query: 289 SSDNTYGSPISGMSSVD-DGNDLKHKLRELENSLLGPDDFDIVDSYGSSMEASLHGACPSGRYNWDLIAENIPKLDMKEVLLLCAQAVSDGDIPTARGWMDNVLVKMVSVTGEPIQRLSAYLLEGLRARLESSGILIYKALKCEQPTSKELMSYMHVLYQICPYFKFAYISANAVIHETMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRVTGVDDSQSFHARGGGLQIVGQRLSDFARSCGVPFEFHSAAMSGCEVQQENLSIRPGEALAVNFPYILHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGIERVERHELFGKWRSRFSMAGFKQCQLSSSVMHSVENMLKDFNQNYRLEHRDGALYLNWMKRAMATSSAWR 1629 S + SP+SG S+ + + +L L++LE +++ PD + ++ G + HG S Y E I + D+K VL CA+AV + D+ W+ + L +MVSV+GEP+QRL AY+LEGL ARL SSG IYKAL+C+ PT EL++YMH+LY+ CPYFKF Y SAN I E + NES +HIIDFQI+QG QW LI+AL RPGGPP +R+TG+DD +S AR GGL++VGQRL A CGVPFEFH AA+ EV+ E L +R GEALAVNFP +LHHMPDESV++ENHRDRLLRLVK LSP VVTLVEQE+NTNT+PF RFVETM++Y A+FESIDV A+D K+RI+ EQ+C+AR++VN+IACEG+ER ERHE GKWRSRF MAGFK LSS V +++ +L+ +++ Y LE RDGALYL W + + TS AWR Sbjct: 156 SPEENNNSPLSGSSATNTNETELSLMLKDLETAMMEPDVDNSYNNQGGFGQQ--HGVVSSAMYRS---MEMISRGDLKGVLYECAKAVENYDLEMT-DWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGALYLGWKNQPLITSCAWR 597
BLAST of Psat4g002520.2 vs. DB:Swiss
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana OX=3702 GN=SCL21 PE=1 SV=1) HSP 1 Score: 469.544 bits (1207), Expect = 8.874e-162 Identity = 226/382 (59.16%), Postives = 285/382 (74.61%), Query Frame = 1 Query: 484 LIAENIPKLDMKEVLLLCAQAVSDGDIPTARGWMDNVLVKMVSVTGEPIQRLSAYLLEGLRARLESSGILIYKALKCEQPTSKELMSYMHVLYQICPYFKFAYISANAVIHETMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRVTGVDDSQSFHARGGGLQIVGQRLSDFARSCGVPFEFHSAAMSGCEVQQENLSIRPGEALAVNFPYILHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGIERVERHELFGKWRSRFSMAGFKQCQLSSSVMHSVENMLKDFNQNYRLEHRDGALYLNWMKRAMATSSAWR 1629 LI E I + D+K VL+ CA+AVS+ ++ AR W L MVS++GEPIQRL AY+LEGL ARL +SG IYK+L+ +P S E +SY++VL+++CPYFKF Y+SAN I E M +E RIHIIDFQI QG+QW LIQA A RPGG P IR+TGV D G L V +RL A+ VPF F++ + CEV+ ENL +R GEAL VNF Y+LHH+PDESVS+ENHRDRLLR+VKSLSPKVVTLVEQE NTNTSPF RF+ET+ YYTAMFESIDV ++ K+RI+ EQ+C+ARD+VN+IACEG ER+ERHEL GKW+SRFSMAGF+ LSS + ++ +L+D++ Y +E RDGALYL WM R + +S AW+ Sbjct: 40 LIVEAISRGDLKLVLVACAKAVSENNLLMAR-WCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGVGD-------GSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAWK 413
BLAST of Psat4g002520.2 vs. DB:Swiss
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CIGR1 PE=2 SV=1) HSP 1 Score: 445.662 bits (1145), Expect = 3.784e-150 Identity = 239/509 (46.95%), Postives = 312/509 (61.30%), Query Frame = 1 Query: 241 PFSPQDSQSCYSDHH---QSSDNTYGSPISGMSSVDDGNDLKHKLRELENSLLGPDDFDIVDS-------------------------------YGSSMEASLHGACPSGRYNWDL------IAENIPKLDMKEVLLLCAQAVSDGD-------IPTARGWMDNVLVKMVSVTGEPIQRLSAYLLEGLRARLESSGILIYKALKCEQPTSKELMSYMHVLYQICPYFKFAYISANAVIHETMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRVTGVDDSQSFHARGGGLQIVGQRLSDFARSCGVPFEFHSAAMSGCEVQQENLSIRPGEALAVNFPYILHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGIERVERHELFGKWRSRFSMAGFKQCQLSSSVMHSVENMLKDFNQNYRLEHRDGALYLNWMKRAMATSSAW 1626 P SP ++ S Y Q + P+ S ++++H LRE+E L+ PD D S G S AS G P+ Y + + E+ P++ +K++L CA+A+S+ + ARG +VS+ GEPIQRL AYLLEGL AR +SG IY+ALKC +P SKEL+SYM +LY ICPYFKF Y++AN I E + E+ IHIIDFQIAQGTQW LIQALA RPGGPP +R+TG+DD S +ARG GL IVG+ L + +P EF ++ +V +E L IRPGEAL+VNF LHH PDESV + N RD LLR+VK LSPKV TLVEQES+TNT+PF RF ETM+YY+AMFESID +D+K+RIS EQ+C+A+DIVN+IACEG +RVERHEL GKW+SR +MAGF+ LSS V + +L ++ Y L+ +DGA+ L W R + ++SAW Sbjct: 77 PISPLEADSSYRQAGILLQENIQVGADPLYATSR----HNMQHALREIETVLMAPDTDDATTSTKHEFEEIKPAQLVRQRSRTWSHESRQPLPGVGRSQFAS--GGYPTASYEFRPEKRQRELRED-PQIIVKQLLTRCAEALSEDRTEEFHKLVQEARG--------VVSINGEPIQRLGAYLLEGLVARHGNSGTNIYRALKCREPESKELLSYMRILYNICPYFKFGYMAANGAIAEALRTENNIHIIDFQIAQGTQWITLIQALAARPGGPPRVRITGIDDPVSEYARGEGLDIVGKMLKSMSEEFKIPLEFTPLSVYATQVTKEMLEIRPGEALSVNFTLQLHHTPDESVDVNNPRDGLLRMVKGLSPKVTTLVEQESHTNTTPFLMRFGETMEYYSAMFESIDANLPRDNKERISVEQHCLAKDIVNIIACEGKDRVERHELLGKWKSRLTMAGFRPYPLSSYVNSVIRKLLACYSDKYTLDEKDGAMLLGWRSRKLISASAW 570
BLAST of Psat4g002520.2 vs. DB:Swiss
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SCL1 PE=2 SV=1) HSP 1 Score: 386.341 bits (991), Expect = 1.147e-126 Identity = 188/445 (42.25%), Postives = 287/445 (64.49%), Query Frame = 1 Query: 340 DGNDLKHKLRELENSLLGPDD---------FDIVDSYGSSMEASLHGACPSGRYNWDLIA-----ENIPKLDMKEVLLLCAQAVSDGDIPTARGWMDNVLVKMVSVTGEPIQRLSAYLLEGLRARLESSGILIYKALKCEQPTSKELMSYMHVLYQICPYFKFAYISANAVIHETMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRVTGVDDSQSFHARGGGLQIVGQRLSDFARSCGVPFEFHSAAMSGCEVQQENLSIRPGEALAVNFPYILHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGIERVERHELFGKWRSRFSMAGFKQCQLSSSVMHSVENMLK-DFNQNYRLEHRDGALYLNWMKRAMATSSAWR 1629 D ++ K++ELE +LLG +D +I + E+ H P + D + E + + K++L+ CA+A+S+G + A M N L ++VS+ G+P QR++AY++EGL AR+ +SG IY+ALKC++P S E ++ M VL+++CP FKF +++AN I E + E +HIIDF I QG Q+ LI+++A PG P +R+TG+DD +S GGL+I+G RL A GV F+F + V L +PGE L VNF + LHHMPDESV+ N RD LL +VKSL+PK+VT+VEQ+ NTNTSPFF RF+E +YY+A+FES+D+ ++ ++R++ E+ C+ARDIVN++ACEG ER+ER+E GKWR+R MAGF +S+ V ++++N++K + Y+L+ G L+ W ++++ +SAWR Sbjct: 150 DDEQMRSKIQELERALLGDEDDKMVGIDNLMEIDSEWSYQNESEQHQDSPKESSSADSNSHVSSKEVVSQATPKQILISCARALSEGKLEEALS-MVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRALKCKEPPSDERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593
BLAST of Psat4g002520.2 vs. DB:Swiss
Match: SCL14_ARATH (Scarecrow-like protein 14 OS=Arabidopsis thaliana OX=3702 GN=SCL14 PE=2 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 1.629e-67 Identity = 127/378 (33.60%), Postives = 211/378 (55.82%), Query Frame = 1 Query: 511 DMKEVLLLCAQAVSDGDIPTARGWMDNVLVKMVSVTGEPI----QRLSAYLLEGLRARLESSGILIYKALKCEQPTSKELMSYMHVLYQICPYFKFAYISANAVIHETMANESRIHIIDFQIAQGTQWHLLIQALA-HRPGGPPFIRVTGVDDSQSFHARGGGLQIVGQRLSDFARSCGVPFEFHSAAMSGCEVQQENLSIRPGEALAVNFPYILHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGIERVERHELFGKWRSRFSMAGFKQCQLSSSVMHSVENMLKD-FNQNYRLEHRDGALYLNWMKRAMATSSAW 1626 D++ +L+LCAQAVS D TA N +++ + P+ +RL+ Y L ARL +G IY AL ++ ++ +++ +CP+ K A I AN + AN + IHIIDF I+ G QW LI L+ RPGG P +R+TG++ Q G+Q G RL+ + + VPFE+++ A +Q E+L +R GE + VN + ++ DE+V + + RD +L+L++ ++P V N N F RF E + +Y+A+F+ D A++D+ R+ E+ R+IVN++ACEG ERVER E + +W++R AGF+Q L +M +++ +++ +++N+ ++ L W R + SS W Sbjct: 392 DLRTLLVLCAQAVSVDDRRTA-----NEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLLQGWKGRIVYASSLW 764
BLAST of Psat4g002520.2 vs. DB:Swiss
Match: RGL1_ARATH (DELLA protein RGL1 OS=Arabidopsis thaliana OX=3702 GN=RGL1 PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 1.532e-66 Identity = 132/373 (35.39%), Postives = 205/373 (54.96%), Query Frame = 1 Query: 526 LLLCAQAVSDGDIPTARGWMDNVLVKMVSVTGEPIQRLSAYLLEGLRARLESSGILIYKALKCEQPTSKELMSYMHV-LYQICPYFKFAYISANAVIHETMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRVTGVDDSQSFHARGGGLQIVGQRLSDFARSCGVPFEFHSAAMSGC-EVQQENLSIRPG-EALAVNFPYILHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGIERVERHELFGKWRSRFSMAGFKQCQLSSSVMHSVENMLKDF--NQNYRLEHRDGALYLNWMKRAMATSSAWR 1629 LL CA+AV ++ A + +V + S G +++++ Y EGL R IY+ + + + Y+ CPY KFA+ +AN I E A ++H+ID + G QW LIQALA RP GPP R+TG+ S + +Q VG +L A + GV FEF S A++ +++ E L IRPG E++AVN + LH + SI D+ L +KS+ P ++T+VEQE+N N + F RF E++ YY+++F+S++ ++D R+ +E + R I+N++ACEG +RVERHE +WR+RF + GFK + S+ +L + Y +E +G L L W R + +SAWR Sbjct: 156 LLACAEAVQQNNLKLADALVKHVGLLASSQAG-AMRKVATYFAEGLARR-------IYRIYPRDDVALSSFSDTLQIHFYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLT------DIQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSI----DKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQD---RVMSEL-FLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWR 506
BLAST of Psat4g002520.2 vs. DB:Swiss
Match: RGL2_ARATH (DELLA protein RGL2 OS=Arabidopsis thaliana OX=3702 GN=RGL2 PE=1 SV=2) HSP 1 Score: 225.713 bits (574), Expect = 1.417e-65 Identity = 145/436 (33.26%), Postives = 225/436 (51.61%), Query Frame = 1 Query: 355 KHKLRELENSLLGPDDFDIVDSYGSSMEASLHGACPSGRYNWDLIAENIPKLDMKEV-------LLLCAQAVSDGDIPTARGWMDNVLVKMVSVTGEPIQRLSAYLLEGLRARLESSGILIYKALKCEQPTSKELMSYMHVLYQICPYFKFAYISANAVIHETMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRVTGVDDSQSFHARGGGLQIVGQRLSDFARSCGVPFEFHS-AAMSGCEVQQENLSIRP-GEALAVNFPYILHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGIERVERHELFGKWRSRFSMAGFKQCQLSSSVMHSVENMLKDF--NQNYRLEHRDGALYLNWMKRAMATSSAWR 1629 ++ LR + P + ++ D SS L C S D ++ +D +E L+ CA+A+ ++ A + V S G + +++ Y + L R+ P+ +E++ MH Y+ CPY KFA+ +AN I E + R+H+ID + QG QW L+QALA RPGGPP R+TG+ Q+ ++ LQ +G +L+ FA++ GV FEF AA S +++ E RP E L VN + LH + S SIE +LL VK++ P +VT+VEQE+N N F RF E + YY+++F+S++ + + + R+ +E + R I+N++A EG +RVERHE +WR R AGF L SS +L + YR+E DG L + W R + T+SAW+ Sbjct: 124 EYDLRAIPGLSAFPKEEEVFDEEASSKRIRLGSWCESS----DESTRSVVLVDSQETGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAG-AMGKVATYFAQALARRIYRDYTAETDVCAAVNPSFEEVLE-MH-FYESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENS--DSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIE----KLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEV-YLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545 The following BLAST results are available for this feature:
BLAST of Psat4g002520.2 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g002520.2_Ps_Cameor_v1a ID=Psat4g002520.2_Ps_Cameor_v1a; Name=Psat4g002520.2; organism=Pisum sativum; type=mRNA; length=3237bpback to top protein sequence of Psat4g002520.2_Ps_Cameor_v1a >Psat4g002520.2_Ps_Cameor_v1a ID=Psat4g002520.2_Ps_Cameor_v1a; Name=Psat4g002520.2_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=544bpback to top mRNA from alignment at chr4LG4:2927195..2930431+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat4g002520.2_Ps_Cameor_v1a ID=Psat4g002520.2_Ps_Cameor_v1a; Name=Psat4g002520.2; organism=Pisum sativum; type=mRNA; length=3237bp; location=Sequence derived from: chr4LG4:2927195..2930431+ (Pisum sativumback to top Coding sequence (CDS) from alignment at chr4LG4:2927195..2930431+ >Psat4g002520.2_Ps_Cameor_v1a ID=Psat4g002520.2_Ps_Cameor_v1a; Name=Psat4g002520.2; organism=Pisum sativum; type=CDS; length=3264bp; location=Sequence derived from: chr4LG4:2927195..2930431+ (Pisum sativumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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