Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Species Type
Psat4g002680.1 Psat4g002680.1_Ps_Cameor_v1a-protein Pisum sativum polypeptide Psat4g002680.1_Ps_Cameor_v1a Psat4g002680.1_Ps_Cameor_v1a Pisum sativum polypeptide
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g002680.1.five_prime_utr1 Psat4g002680.1.five_prime_utr1_Ps_Cameor_v1a Pisum sativum five_prime_UTR
The following exon feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g002680.1.exon1 Psat4g002680.1.exon1_Ps_Cameor_v1a Pisum sativum exon Psat4g002680.1.exon2 Psat4g002680.1.exon2_Ps_Cameor_v1a Pisum sativum exon Psat4g002680.1.exon3 Psat4g002680.1.exon3_Ps_Cameor_v1a Pisum sativum exon Psat4g002680.1.exon4 Psat4g002680.1.exon4_Ps_Cameor_v1a Pisum sativum exon Psat4g002680.1.exon5 Psat4g002680.1.exon5_Ps_Cameor_v1a Pisum sativum exon Psat4g002680.1.exon6 Psat4g002680.1.exon6_Ps_Cameor_v1a Pisum sativum exon Psat4g002680.1.exon7 Psat4g002680.1.exon7_Ps_Cameor_v1a Pisum sativum exon Psat4g002680.1.exon8 Psat4g002680.1.exon8_Ps_Cameor_v1a Pisum sativum exon Psat4g002680.1.exon9 Psat4g002680.1.exon9_Ps_Cameor_v1a Pisum sativum exon Psat4g002680.1.exon10 Psat4g002680.1.exon10_Ps_Cameor_v1a Pisum sativum exon Psat4g002680.1.exon11 Psat4g002680.1.exon11_Ps_Cameor_v1a Pisum sativum exon Psat4g002680.1.exon12 Psat4g002680.1.exon12_Ps_Cameor_v1a Pisum sativum exon
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g002680.1.cds1 Psat4g002680.1.cds1_Ps_Cameor_v1a Pisum sativum CDS Psat4g002680.1.cds2 Psat4g002680.1.cds2_Ps_Cameor_v1a Pisum sativum CDS Psat4g002680.1.cds3 Psat4g002680.1.cds3_Ps_Cameor_v1a Pisum sativum CDS Psat4g002680.1.cds4 Psat4g002680.1.cds4_Ps_Cameor_v1a Pisum sativum CDS Psat4g002680.1.cds5 Psat4g002680.1.cds5_Ps_Cameor_v1a Pisum sativum CDS Psat4g002680.1.cds6 Psat4g002680.1.cds6_Ps_Cameor_v1a Pisum sativum CDS Psat4g002680.1.cds7 Psat4g002680.1.cds7_Ps_Cameor_v1a Pisum sativum CDS Psat4g002680.1.cds8 Psat4g002680.1.cds8_Ps_Cameor_v1a Pisum sativum CDS Psat4g002680.1.cds9 Psat4g002680.1.cds9_Ps_Cameor_v1a Pisum sativum CDS Psat4g002680.1.cds10 Psat4g002680.1.cds10_Ps_Cameor_v1a Pisum sativum CDS Psat4g002680.1.cds11 Psat4g002680.1.cds11_Ps_Cameor_v1a Pisum sativum CDS Psat4g002680.1.cds12 Psat4g002680.1.cds12_Ps_Cameor_v1a Pisum sativum CDS
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g002680.1.three_prime_utr1 Psat4g002680.1.three_prime_utr1_Ps_Cameor_v1a Pisum sativum three_prime_UTR
Homology
BLAST of Psat4g002680.1 vs. DB:Swiss
Match:
RUS6_ARATH (Protein root UVB sensitive 6 OS=Arabidopsis thaliana OX=3702 GN=RUS6 PE=2 SV=1)
HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0
Identity = 347/484 (71.69%), Postives = 410/484 (84.71%), Query Frame = 1
Query: 43 PNIASPSSQDILIRETLRISAELASTPLLDTTTISPPLESTS--TSTVRFICCEEIDGRRWKYVADTDASGQFKTNSFRSLSLQTPKPPLDELMAFVRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLSSVGVSRNRATPGAVAINWILKDGAGRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAAPHLFLPLACAANVLKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGFSIMIAKRNPSLIATFSLLSCGYILSSYQEVKSVVLHTLNSARFSVAVESFLKTGQVPTLREGNLNEDIFSFPW-KDKPVVLGSRIKDAFQDPSAYVAIEPLFDKERYIVTYNPSKSKVHAVLKDQAKSDDILKAAFHAHVLSSFIKSLNKSKVSSWKQSEDLNLNVMLSVADLEACVADSCKVVTSAYWLFKNKVHEQGWTMSESLLNPGRARLCQ 1485
P+ + S +L RETLRISA LAS P+ D SPP + ST+R ICCEEIDGRR+KYVA++D SG+FK NS R++SL++P+ P DE+ +F+RSYVVPEGFP SV SYVPYMTWRALKHFFGGAMGVFTTQTLL+SVG SRN + AVAINWILKDGAGRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAA PHLFLPLACAANV+KNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL+GTGFSI+I+KRNPSL+ TF LLSCGY++SSYQEV+SVVLHTLN ARF+VAVESFLKTG+VP+L+EGN+ E IF+FPW D+PV+LG+R KDAFQDPS Y+A++P FDKERY+VTY+P+K KV+A+LK QA SDDILKAAFHAHVL F +N+SK + + E L+ + +LE+ +A+SC++V+++Y +FK++ EQGW MSESLLNPGRARLC
Sbjct: 12 PDTIASDSVRLLSRETLRISASLASPPVDDLPPHSPPPPDSQFLHSTLRLICCEEIDGRRFKYVAESDGSGRFKKNSVRAISLESPQTPFDEVGSFLRSYVVPEGFPGSVNESYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGASRNSSASAAVAINWILKDGAGRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVPHLFLPLACAANVVKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLMGTGFSILISKRNPSLVTTFGLLSCGYLMSSYQEVRSVVLHTLNRARFTVAVESFLKTGRVPSLQEGNIQEKIFTFPWVDDRPVMLGARFKDAFQDPSTYMAVKPFFDKERYMVTYSPTKGKVYALLKHQANSDDILKAAFHAHVLLHF---MNQSKDGNPRSVEQLDPAFAPTEYELESRIAESCEMVSTSYGVFKSRAAEQGWRMSESLLNPGRARLCH 492
BLAST of Psat4g002680.1 vs. DB:Swiss
Match:
RUS2_ARATH (Protein root UVB sensitive 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RUS2 PE=1 SV=2)
HSP 1 Score: 181.8 bits (460), Expect = 1.184e-50
Identity = 117/359 (32.59%), Postives = 202/359 (56.27%), Query Frame = 1
Query: 250 QFKTNSFRSLSLQTPKPPLDELM--AFVRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLSSVGVSRNRATPG-AVAINWILKDGAGRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAAPHLFLPLACAANVLKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGFSIMIAKRNPS----LIATFSLLSCGYILSSYQEVKSVVLHTLNSARFSVAVESFLKTGQVPTLREGNLNEDIFSFPWKDKP------VVLGSRIKDAFQDPSAYVAIEPLFDKERYIVTYNPSKSKVHAVLKDQAKSDDILKAAFHAHVLSSFIKSLNK 1287
QF+++ S+ + P+ + M +F+ + P G+P SV Y+ Y +RAL+HF A+ V +TQ+LL + G+ R TP A ++WILKDG VGK++ + G + D + K+ R D+L +LG G+EL + PHLFL +A N K +A V + +TR PIY +FAK N+ D+ AKGE + + ++ G G I +A S + S+LS ++ S ++++ V ++TLN R ++ V +FLKTG+VP+ + ED+ FP ++P V +G + A + PS ++ +F +E++++++ KS VL+ A +D L+ ++++++KS+ K
Sbjct: 41 QFQSDGHLSMKVVDDARPVPQKMVESFLNKFF-PSGYPYSVNEGYLRYTQFRALQHFSSAALSVLSTQSLLFAAGL---RPTPAQATVVSWILKDGMQHVGKLICSNLGARMDSEPKRWRILADVLYDLGTGLELVSPLCPHLFLEMAGLGNFAKGMATVAARATRLPIYSSFAKEGNLSDIFAKGEAISTLFNVAGIGAGIQLASTICSSMEGKLVVGSILSVVHVYSVVEQMRGVPINTLNPQRTALIVANFLKTGKVPSPPDLRFQEDLM-FP--ERPIQDAGNVKVGRALHKAVK-PSEVQRLKQVFVEEKFLLSHG--KSWTDMVLEHDATGEDALR----GWLVAAYVKSMTK 385
BLAST of Psat4g002680.1 vs. DB:Swiss
Match:
RUS1_ARATH (Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RUS1 PE=1 SV=1)
HSP 1 Score: 158.303 bits (399), Expect = 9.535e-41
Identity = 110/385 (28.57%), Postives = 190/385 (49.35%), Query Frame = 1
Query: 199 EIDGRRWKYVADTDASGQF--KTNSFRSLSLQTPKPPLDELMAFVRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLSSVGVSRNRATPGAVAINWILKDGAGRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAAPHLFLPLACAANVLKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGFSIMIAK---RNPSL-IATFSLLSCGYILSSYQEVKSVVLHTLNSARFSVAVESFLKTGQVPTLREGNLNEDIF--------SFPWK-----------------DKPVVLGSRIKDAFQDPSAYVAIEPLFDKERYIVTYNPSKSKVHAVLKDQAKSDDILKAAFHAHVL 1260
E+ G + K + +F + ++F S TP+ L + + +++PEGFP+SVT Y+ Y WR ++ GV TQ+LL +VG+ + A P A AINW+LKDG G + K++ ++ G+ FD K R DLL G+E+ T P F+ + AA ++ AA+ +TR+ FA N +V AKGE G ++ +G I++A + SL +A F +++ ++ ++ + + + L TLN R S+ +L +GQ P ++E N E +F P K ++ + LGS++ D + +A+ L+ E YI+T + K + +LK+ + D+L++ F + L
Sbjct: 150 EVRGSKRKRLVPDFVKDEFVSEESAFELSSSLTPENLLAQCRNLLTQFLLPEGFPNSVTSDYLDYSLWRGVQGIASQISGVLATQSLLYAVGLGKG-AIPTAAAINWVLKDGIGYLSKIMLSKYGRHFDVHPKGWRLFADLLENAAFGMEMLTPVFPQFFVMIGAAAGAGRSAAALIQAATRSCFNAGFASQRNFAEVIAKGEAQGMVSKSVGILLGIVVANCIGTSTSLALAAFGVVTTIHMYTNLKSYQCIQLRTLNPYRASLVFSEYLISGQAPLIKEVNDEEPLFPTVRFSNMKSPEKLQDFVLSSEAKAAAADIEERLQLGSKLSDVIHNKEEAIALFDLYRNEGYILTEH--KGRFCVMLKESSTPQDMLRSLFQVNYL 531
BLAST of Psat4g002680.1 vs. DB:Swiss
Match:
RUS1_MOUSE (RUS1 family protein C16orf58 homolog OS=Mus musculus OX=10090 PE=1 SV=1)
HSP 1 Score: 155.221 bits (391), Expect = 1.664e-40
Identity = 96/325 (29.54%), Postives = 171/325 (52.62%), Query Frame = 1
Query: 316 MAFVRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLSSVGVSRNRATPGAVAINWILKDGAGRVGKMLFA-RQGKKFDYDLKQLRFAGDLLMELGAGVELATAAAPHLFLPLACAANVLKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKG---ECVGNIADLLGTGFSIMIAKRNPSL-IATFSLLSCGYILSSYQEVKSVVLHTLNSARFSVAVESFLKTGQVPTLREGNLNEDIFSFPWKDKPVVLGSRIKDAFQDPSAYVAIEPLFD--KERYIVTYNPSKSKVHAVLKDQAKSDDILKAAFHAHVLSSF 1269
++ +RS ++P+GFPDSV+P Y+PY W +++ F G TQ +L +GV +A+ A W++KD G +G+++ A +G K D + KQ R D+L ++ +E+ P F +N+ K + V +TR + A+ N+ DV+AK E V N+A LL + + + PSL + F LL+ +I ++Y+ V+++VL TLN +R + +E FL+ G+V N E +++ W + LG + S+ ++ L + E Y++ +N S+++V L +A + +L+AA H +L +
Sbjct: 68 LSGLRSVLLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWLVKDSTGMLGRIILAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPMYPIFFTMTVSTSNLAKCIVGVAGGATRAALTMHQARRNNMADVSAKDSSQETVVNLAGLLVSLLMLPLVSDCPSLSLGCFVLLTALHIYANYRAVRALVLETLNESRLQLVLEHFLQRGEVLEPASANQMEPLWTGFWPSLSLSLGVPLHHLV---SSVSELKQLVEGHHEPYLLCWNKSRNQVQVALSQEAGPETVLRAATHGLILGAL 389
BLAST of Psat4g002680.1 vs. DB:Swiss
Match:
RUS1_PONAB (RUS1 family protein C16orf58 homolog OS=Pongo abelii OX=9601 PE=2 SV=1)
HSP 1 Score: 150.984 bits (380), Expect = 5.492e-39
Identity = 99/364 (27.20%), Postives = 179/364 (49.18%), Query Frame = 1
Query: 199 EIDGRRWKYVADTDASGQFKTNSFRSLSLQTPKPPLDELMAFVRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLSSVGVSRNRATPGAVAINWILKDGAGRVGKMLFA-RQGKKFDYDLKQLRFAGDLLMELGAGVELATAAAPHLFLPLACAANVLKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGFSIMIAKRNPSL----IATFSLLSCGYILSSYQEVKSVVLHTLNSARFSVAVESFLKTGQVPTLREGNLNEDIFSFPWKDKPVVLGSRIKDAFQDPSAYVAIEPLFD--KERYIVTYNPSKSKVHAVLKDQAKSDDILKAAFHAHVLSSF 1269
E+ G RW ++ +S + P PPL L A +P+GFPDSV+P Y+PY W +++ F G G TQ +L +GV +AT A W++KD G +G+++FA +G K D + KQ R D+L ++ +E+ P F +N+ K + +V +TR + A+ N+ DV+AK + +L+G S+++ + F L+ +I ++Y+ V+++V+ TLN R + ++ +L+ G+V N E +++ W + LG + S+ ++ L + +E Y++ ++ S+++V VL +A IL+AA H +L +
Sbjct: 35 EVGGWRWWGLSRAFTVKPEGRDSGEVGAPGAPSPPLSGLQAVF----LPQGFPDSVSPDYLPYQLWDSVQAFASGLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKCIVSVAGGATRAALTVHQARRNNMADVSAKDSSQETLVNLVGLLVSLLMLPLVSGCPGFSLGCFFFLTALHIYANYRAVRALVMETLNEGRLRLVLKHYLQRGEVLNPTAANRMEPLWTGFWPAPSLSLGVPLHRLV---SSVFELQQLVEGHQEPYLLCWDQSRNQVQVVLNQKAGPKTILRAATHGLMLGAL 391
BLAST of Psat4g002680.1 vs. DB:Swiss
Match:
RUS1_HUMAN (RUS1 family protein C16orf58 OS=Homo sapiens OX=9606 GN=C16orf58 PE=1 SV=2)
HSP 1 Score: 147.517 bits (371), Expect = 9.569e-38
Identity = 96/333 (28.83%), Postives = 170/333 (51.05%), Query Frame = 1
Query: 292 PKPPLDELMAFVRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLSSVGVSRNRATPGAVAINWILKDGAGRVGKMLFA-RQGKKFDYDLKQLRFAGDLLMELGAGVELATAAAPHLFLPLACAANVLKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKG---ECVGNIADLLGTGFSIMIAKRNPSL-IATFSLLSCGYILSSYQEVKSVVLHTLNSARFSVAVESFLKTGQVPTLREGNLNEDIFSFPWKDKPVVLGSRIKDAFQDPSAYVAIEPLFD--KERYIVTYNPSKSKVHAVLKDQAKSDDILKAAFHAHVLSSF 1269
P PPL L A +P+GFPDSV+P Y+PY W +++ F G TQ +L +GV +AT A W++KD G +G+++FA +G K D + KQ R D+L ++ +E+ P F +N+ K + +V +TR + A+ N+ DV+AK E + N+A LL + + + P + F L+ +I ++Y+ V+++V+ TLN R + ++ +L+ G+V N E +++ W + LG + S+ ++ L + +E Y++ ++ S+++V VL +A IL+AA H +L +
Sbjct: 66 PSPPLSGLQAVF----LPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAKCIVSVAGGATRAALTVHQARRNNMADVSAKDSSQETLVNLAGLLVSLLMLPLVSGCPGFSLGCFFFLTALHIYANYRAVRALVMETLNEGRLRLVLKHYLQRGEVLDPTAANRMEPLWTGFWPAPSLSLGVPLHRLV---SSVFELQQLVEGHQESYLLCWDQSQNQVQVVLNQKAGPKTILRAATHGLMLGAL 391
BLAST of Psat4g002680.1 vs. DB:Swiss
Match:
RUS1_RAT (RUS1 family protein C16orf58 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1)
HSP 1 Score: 145.976 bits (367), Expect = 4.175e-37
Identity = 94/325 (28.92%), Postives = 169/325 (52.00%), Query Frame = 1
Query: 316 MAFVRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLSSVGVSRNRATPGAVAINWILKDGAGRVGKMLFA-RQGKKFDYDLKQLRFAGDLLMELGAGVELATAAAPHLFLPLACAANVLKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKG---ECVGNIADLLGTGFSIMIAKRNPSL-IATFSLLSCGYILSSYQEVKSVVLHTLNSARFSVAVESFLKTGQVPTLREGNLNEDIFSFPWKDKPVVLGSRIKDAFQDPSAYVAIEPLFD--KERYIVTYNPSKSKVHAVLKDQAKSDDILKAAFHAHVLSSF 1269
++ +RS ++P+GFPDSV+P Y+ Y W +++ F G TQ +L +GV +A+ A W++KD G +G+++FA +G K D + KQ R D+L + +E+ P F +N+ K + V +TR + A+ N+ DV+AK E V N+A LL + + + SL + F LL+ +I ++Y+ V+++VL TLN +R + ++ FL+ G+V N E +++ W + LG + S+ ++ L + +E Y++ +N S+++V L A + +L+AA H +L +
Sbjct: 68 LSGLRSVLLPQGFPDSVSPDYLQYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWLVKDSTGMLGRIIFAWWKGSKLDCNAKQWRLFADILNDTAMFLEIMAPMYPIFFTMTVSTSNLAKCIVGVAGGATRAALTMHQARRNNMADVSAKDSSQETVVNLAGLLVSLLMLPLVSDCLSLSLGCFILLTALHIYANYRAVRALVLETLNESRLQLVLKHFLQRGEVLEPASANQMEPLWTGFWPSLSLSLGVPLHHLV---SSVSELKQLVEGHQEPYLLCWNQSQNQVQVALSQVAGPETVLRAATHGLILGAL 389
BLAST of Psat4g002680.1 vs. DB:Swiss
Match:
RUS3_ARATH (Protein root UVB sensitive 3 OS=Arabidopsis thaliana OX=3702 GN=RUS3 PE=2 SV=1)
HSP 1 Score: 142.51 bits (358), Expect = 4.711e-36
Identity = 107/385 (27.79%), Postives = 181/385 (47.01%), Query Frame = 1
Query: 193 CEEIDGRRWKYVADTDASGQFKTNSF---RSLSLQTPKPPLDELMAFVRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLSSVGVSRNRATPGAVAINWILKDGAGRVGKMLFA-RQGKKFDYDLKQLRFAGDLLMELGAGVELATAAAPHLFLPLACAANVLKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGFSIMIAK---RNPSLI-ATFSLLSCGYILSSYQEVKSVVLHTLNSARFSVAVESFLKTGQVPTLREGNLNEDIFSFPWK-----------DKPVVLGSRIK-----DAFQDPSAYVAIEPLFDKERYIVTYNPSKSKVHAVLKDQAKSDDILKAAFHAHVLSSFIK 1275
C I W + T FKT + SLS+Q + + V VPEGFP SVTP YV + W L+ + +TQ LLS++GV AT W L+D G +G +LF QG D + K R DL+ ++G ++L + P F+ + C ++ ++ V S +TR + + FA +N D++AK +A ++G +++A+ NP I +F L+ ++ ++Y+ V+ +VL++LN R S+ + F++TGQV + + + E + W K V LG R+ D Q + A + +Y++ + K V +L +K D+LK+ HA VL++ ++
Sbjct: 9 CGSITLEEWNGSSSTKL---FKTATITASSSLSIQRSANRFNHVWRRVLQAFVPEGFPGSVTPDYVGFQLWDTLQGLSTYTKMMLSTQALLSAIGVGEKSATVIGATFQWFLRDFTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDIGMLMDLLSPLFPSAFIVVVCLGSLSRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETMATMMGMSLGMLLARFTSGNPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLNFERSSILLTHFIQTGQVLSPEQVSSMEGVLPL-WATSLRSTNSKPLHKRVQLGVRVSSLPRLDMLQLLNGVGASS--YKNAKYLLAH--IKGNVSVILHKDSKPADVLKSYIHAIVLANLME 385
BLAST of Psat4g002680.1 vs. DB:Swiss
Match:
RUS4_ARATH (Protein root UVB sensitive 4 OS=Arabidopsis thaliana OX=3702 GN=RUS4 PE=2 SV=1)
HSP 1 Score: 139.813 bits (351), Expect = 1.325e-34
Identity = 111/403 (27.54%), Postives = 190/403 (47.15%), Query Frame = 1
Query: 352 FPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLSSVGVSRNRATPGAVAINWILKDGAGRVGKMLF-ARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAAPHLFLPLACAANVLKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGE----CVGNIADLLGTGFSIMIAKRNPSLIAT-----FSLLSCGYILSSYQEVKSVVLHTLNSARFSVAVESFLKTGQVPTLREGNLNEDIFSFPWKDKPVVLGSR-------IKDAFQDPSAYV------AIEPLFDKERYIVTYNPS--------KSKVHAVLKDQAKSDDILKAAFHAHVLSSFIKSL--NKSKVSSWKQSEDLNLNVMLSVADLEACVADSCKVVTSAYWLFKNKVHEQGWTMSESLLN 1461
P V+ +Y+ Y+ W+ L F A+ V TQ + ++G+ ++R+ + A NWILKDG GR+ + ++ A FD +LK++RF+ +L L GVEL T P FL LA AN+ K ++ +T + ++++FA +N+G+V+AK + C N+ LL +++ + N L A + + S +L YQ +K + L TL R + +E +++ QVP+ E + E I +LGSR I+ DP A + A++ L + Y +T S KS + L++ A S D++ + + KSL N++K S S+ L++ D +S + ++ EQGW + LL+
Sbjct: 124 LPKQVSDNYISYVKWKFLHRVFSSALQVLATQAMFRAIGIGQSRSLASSAAFNWILKDGLGRLSRCIYTASLASAFDTNLKRVRFSTSVLFSLSIGVELMTPVFPQYFLLLASIANIAKQISLSCYLATGSAVHRSFAVADNLGEVSAKAQIQTVCFDNLGLLLAVLLNMLF-QHNQRLQACLPFVLYPIFSTFDLLGIYQGLKHINLQTLTKDRLEIILERWIEFRQVPSPAEVSEEEGI---------GLLGSRGSKRVWPIRIGCLDPKAQIPTLSMMAMQSLCSDDGYFITMELSSQGFRRIPKSGIVICLREGANSVDVITSLLQTCYIR---KSLGANRTKRSYLSFSD-------LTLQDWTLLTRESKRAARDDNIALNKQMQEQGWIVKNVLLS 506
BLAST of Psat4g002680.1 vs. DB:Swiss
Match:
RUS5_ARATH (Protein root UVB sensitive 5 OS=Arabidopsis thaliana OX=3702 GN=RUS5 PE=2 SV=1)
HSP 1 Score: 127.487 bits (319), Expect = 2.097e-30
Identity = 111/353 (31.44%), Postives = 166/353 (47.03%), Query Frame = 1
Query: 325 VRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLSSVGVS-------RNRATPGAVAINWILKDGAGRVGKMLFA-RQGKKFDYDLKQLRFAGDLLMELGAGVELATAAAPHLFLPLACAANVLKNVAAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADLLGTGFSIMI------AKRNPSLIATFSLLSCGYILSSYQEVKSVVLHTLNSARFSVAVESFLKTGQVPTLREGNLNEDIFSFPWKDKP-VVLGSRIKDAF---QDPSAYVAIEPLFDKERYIVTYNP--SKSKVHAVLKDQAKSDDILKAAFHAHVLSSFIKSLNKSK--VSSW-KQS 1314
VR +V P GFP SV+ Y+ YM W+ + G V T +LL +VGV A A AI W+ KDG G +G++L R G FD D KQ R D + G+ +LAT P FL LA N+ K VA + I FA N+G+V AK E A L+G GF I+I K P ++ T++ + ++ YQ + + +T+N R + VES + VP + N E+I + KP ++ G +++ + S A+ ++ KE+YI+T N ++ K A S D+L+ + A+ L ++ K K V W KQS
Sbjct: 115 VRDFVFPSGFPGSVSDDYLDYMLWQFPTNITGWICNVLVTSSLLKAVGVGSFSGTSAAATAAASAAAIRWVSKDGIGALGRLLIGGRFGSLFDDDPKQWRMYADFIGSAGSFFDLATQLYPSQFLLLASTGNLAKAVARGLRDPSFRVIQNHFAISGNLGEVAAKEEVWEVAAQLIGLGFGILIIDTPGLVKSFPFVLLTWTSIRLVHLWLRYQSLAVLQFNTVNLKRARIIVESHVVHSVVPGYVDCNKRENILLWQRFMKPRIIFGVSLEELSGLEKSVSKVKALLKMYTKEKYILTLNKLNKDTEFSVSFKVNATSRDVLRCLWQAYWLEENMEESFKDKDSVFHWLKQS 467
The following BLAST results are available for this feature:
BLAST of Psat4g002680.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (
BLAST: P. sativum Cameor genome v1a vs. Swissprot )
Total hits: 10
1000 2000 3000 4000 5000 6000 7000 Expect = 0.00e+0 / Id = 71.69 Expect = 1.18e-50 / Id = 32.59 Expect = 9.53e-41 / Id = 28.57 Expect = 1.66e-40 / Id = 29.54 Expect = 5.49e-39 / Id = 27.20 Expect = 9.57e-38 / Id = 28.83 Expect = 4.17e-37 / Id = 28.92 Expect = 4.71e-36 / Id = 27.79 Expect = 1.32e-34 / Id = 27.54 Expect = 2.10e-30 / Id = 31.44 Sequence RUS6_ARATH RUS2_ARATH RUS1_ARATH RUS1_MOUSE RUS1_PONAB RUS1_HUMAN RUS1_RAT RUS3_ARATH RUS4_ARATH RUS5_ARATH
Match Name E-value Identity Description
RUS6_ARATH 0.000e+0 71.69 Protein root UVB sensitive 6 OS=Arabidopsis thalia... [more] RUS2_ARATH 1.184e-50 32.59 Protein root UVB sensitive 2, chloroplastic OS=Ara... [more] RUS1_ARATH 9.535e-41 28.57 Protein root UVB sensitive 1, chloroplastic OS=Ara... [more] RUS1_MOUSE 1.664e-40 29.54 RUS1 family protein C16orf58 homolog OS=Mus muscul... [more] RUS1_PONAB 5.492e-39 27.20 RUS1 family protein C16orf58 homolog OS=Pongo abel... [more] RUS1_HUMAN 9.569e-38 28.83 RUS1 family protein C16orf58 OS=Homo sapiens OX=96... [more] RUS1_RAT 4.175e-37 28.92 RUS1 family protein C16orf58 homolog OS=Rattus nor... [more] RUS3_ARATH 4.711e-36 27.79 Protein root UVB sensitive 3 OS=Arabidopsis thalia... [more] RUS4_ARATH 1.325e-34 27.54 Protein root UVB sensitive 4 OS=Arabidopsis thalia... [more] RUS5_ARATH 2.097e-30 31.44 Protein root UVB sensitive 5 OS=Arabidopsis thalia... [more]
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Sequences
The
following sequences are available for this feature:
mRNA sequence
>Psat4g002680.1_Ps_Cameor_v1a ID=Psat4g002680.1_Ps_Cameor_v1a; Name=Psat4g002680.1; organism=Pisum sativum; type=mRNA; length=7526bp back to top protein sequence of Psat4g002680.1_Ps_Cameor_v1a
>Psat4g002680.1_Ps_Cameor_v1a ID=Psat4g002680.1_Ps_Cameor_v1a; Name=Psat4g002680.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=500bp back to top mRNA from alignment at chr4LG4:3155584..3163109+
Legend: five_prime_UTR exon polypeptide CDS three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat4g002680.1_Ps_Cameor_v1a ID=Psat4g002680.1_Ps_Cameor_v1a; Name=Psat4g002680.1; organism=Pisum sativum; type=mRNA; length=7526bp; location=Sequence derived from: chr4LG4:3155584..3163109+ (Pisum sativumGGGTAGAGTTTGTAAAAGAAAAAGAGTGAGGGGTGGGGTTAGAGTAATAA
GTAATGAAAAGGAGTTAGAGATGGTGGAATGTGTTCACACCGTCCGTAGT
GGACTCACTGGATGAGAGAGAGAGAGAATACTCGTGTGTGACTCTGTGAC
TGAAAGCGAACTCACAAGTTTCTTCTTCTTCTTCTTCATTCTCTTCGCCA
TCTTTTTATATTTATAATTTAATCCCTTTTCAACTTTTCTTCTCTTTCGA
TGAAACCTATGCTCTCTATTTCAAATTAATATCTCATCTCATCTCATCTC
ATGGCTATCACTCCCAATTCTTTGAATATGAAGAAGCAGACTCCCAACAT
AGCTTCTCCTTCTTCTCAGGATATTCTCATTCGCGAAACGCTGCGTATCA
GTGCCGAATTAGCATCCACGCCTCTCCTCGACACCACCACGATATCGCCG
CCGCTTGAATCCACTTCAACATCCACCGTCAGATTCATCTGCTGCGAGGA
AATCGATGGCCGCAGATGGAAGTACGTCGCCGATACCGATGCCTCCGGCC
AATTCAAGACTAATTCGTTTCGTTCTCTCAGTTTACAAACCCCTAAGCCT
CCTCTTGATGAATTGATGGCGTTTGTTAGATCCTATGTCGTTCCTGAGGG
TTTTCCGGATAGTGTTACGCCTTCGTATGTTCCTTACATGACTTGGAGGG
CTCTCAAG CACTTTTTTGGTGGAGCTATGGGTGTTTTCACTACTCAAACCCTTTT
GAGTTCAGTTGGTGTCTCTAGAAACAGAGCCACTCCCGGGGCTGTTGCAA
TCAACTGGATTCTCAAG GATGGAGCT
GGTCGTGTGGGAAAGATGCTTTTTGCCCGGCAAGGAAAAAAGTTTGATTA
TGATCTCAAACAG CTGCGGTTTGCCGGTGATCTTCTAATGGAGTTGGGTGCTGG
GGTGGAACTAGCAACTGCTGCAGCACCGCATCTATTTCTTCCTTTGGCTT
GTGCCGCTAATGTTCTCAAG AATGTTGCTGCTGTAACATCAACATCAACTAGGACACCAATTTATAAA
GCCTTTGCTAAAGGAGAAAACATAGGGGATGTCACTGCGAAAGGAGAATG
TGTTGGCAATATTGCAGACCTG TTAGGTACTGGGTTTAGCATAATG
ATTGCCAAAAGGAATCCATCTCTTATTGCCACCTTTTCCCTTCTTTCATG
TGGATATATCCTTAGCTCTTATCAAGAG GTAAAATCTGTGGTTTTGCACACACTTAACTCCGCA
AGATTCAGTGTGGCGGTAGAGTCCTTCCTCAAGACAG GACAAGTTCCAACTTTGCGGGAGGGCAACTTGAACGAG
GACATATTCAGTTTTCCATGGAAAGATAAACCTGTTGTCCTTG GATCAAGAATCAAGGACGCATTCCAAGACCCCAG
TGCTTATGTTGCCATAGAGCCCCTGTTTGAT AAGGAGAGGTA
CATTGTGACTTATAATCCTTCAAAATCTAAGGTTCATGCTGTGCTCAAGG
ATCAGGCAAAGTCAGACGACATTCTAAAAGCAGCATTTCAT GCTCACGTACTCTCG
AGTTTCATAAAATCGTTGAATAAAAGTAAGGTCTCATCTTGGAAACAAAG
TGAGGATCTTAATTTAAATGTGATGCTCTCAGTTGCTGATCTCGAGGCTT
GTGTTGCTGATTCCTGCAAAGTTGTCACAAGTGCTTACTGGCTTTTCAAA
AATAAAGTCCACGAACAG GGCTGGACAATGTCAGAATCACTTCTAAATC
CTGGGCGAGCTAGGCTATGTCAAGCTGATAACAGATGA TATTAGCATATA
TGCTCAGCTGGCTACTGTTATATTTCAAGCGTATAAGTTCTTGGGCTTAC
TCTTGATGAGAAATGAGTCGGGCAATTTCAACTATGTAAAGAGGAGTTGC
AATCCTCAAGTTGAGTCATGCTATCTTTGATCCCCACAAAATGCATGAAC
TTTTCTGGATTGATGCATGCATACATAATTTTAAAGAAGATTAGTTATAT
GATTGAGTTGTTAGCATGACTGCATATTACCACATACATACCCCCTACGT
GCTTTATGCCCCCACATCACCACCACCAAAAGTTGTGTTGCTCTGATGTT
CGTAAGTTCTCTTTGTTTTCTTGGCTCTTTGGTATGGTGACCACTGGTAA
TTCATTGGTAAGTTTTTTAGTTTCAATTTTGCAAGATTTTAAAGGAGAGT
TCGTAACCTTGTTATTAATATATAAACAATAAAAGTTCAATGTAATCATG
ATTTTTGTAATAAGTTTTTACTAGGCAATACTTATATTTTTGTGCATTTT
AATTACTCTTTTAATGTAAGTATTTTAGTCAATTAAACTTATTTTATCTT
GAAAAATAACACTTTTCTTTCTCATTGAGACCTTTTCAATTTCAACAACG
ATATGATAATCGTAAGCATTCATCAT back to top Coding sequence (CDS) from alignment at chr4LG4:3155584..3163109+
>Psat4g002680.1_Ps_Cameor_v1a ID=Psat4g002680.1_Ps_Cameor_v1a; Name=Psat4g002680.1; organism=Pisum sativum; type=CDS; length=3000bp; location=Sequence derived from: chr4LG4:3155584..3163109+ (Pisum sativum back to top
