Psat4g002800.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat4g002800.1 vs. DB:Swiss
Match: NUDT2_ARATH (Nudix hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=NUDT2 PE=1 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 5.083e-108 Identity = 157/284 (55.28%), Postives = 201/284 (70.77%), Query Frame = 1 Query: 1 MSASTDSSLTAXXXXXXXXXLLASTDDDYDGVIVEISDLVMDSTTFLSILRPSISNWKQQGKKGVWIKLPIHLANLVETLIKEGFWYHHAEPKYLMLVHWIADSANTIPANATHRVGVGALVVNEKREVLVVQEKTGHFRGTGSWKFPTGVADQGEEIWEAAVREVKEEAGVDSEFVEVLAFRQSHASFFEKSDLFFVCLLRPVSSDIKIQEVEIEAGKWMPFDEYAAQPFMEKYELLRQINDIYLAKIDGHYSGFTPVSTKSNFSNQKNSYLYLNVGGLKRSN 852
MSAS SS T + LL S D Y GV+ E++ MD + F ++LR S+S W QGKKGVWIKLP L L ET +KEGFW+HHAE YLMLV+WI +T+PANA+HRVG+GA V+N +EVLVVQEKTG F+G G WKFPTGV ++GE+I + +VREVKEE GVD+EF ++LAFRQ+H +FF KSDLFFVC+L+P+S +I QE EIEA +WMP++EY QPF++ YELLR + DI AK +G Y GFTP+ + +Q+ + LY N L N
Sbjct: 1 MSAS--SSSTNPMSREDATTLLPSVQDKYGGVMTEMTH-PMDPSLFSTLLRSSLSTWTLQGKKGVWIKLPKQLIGLAETAVKEGFWFHHAEKDYLMLVYWIPKEDDTLPANASHRVGIGAFVINHNKEVLVVQEKTGRFQGQGIWKFPTGVVNEGEDIHDGSVREVKEETGVDTEFDQILAFRQTHKAFFGKSDLFFVCMLKPLSLEINAQESEIEAAQWMPWEEYINQPFVQNYELLRYMTDICSAKTNGDYEGFTPLRVSA--PDQQGN-LYYNTRDLHSRN 278
BLAST of Psat4g002800.1 vs. DB:Swiss
Match: NUD10_ARATH (Nudix hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=NUDT10 PE=1 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 2.090e-95 Identity = 142/258 (55.04%), Postives = 184/258 (71.32%), Query Frame = 1 Query: 61 LLASTDDDYDGVIVEISDLVMDSTTFLSILRPSISNWKQQGKKGVWIKLPIHLANLVETLIKEGFWYHHAEPKYLMLVHWIADSANTIPANATHRVGVGALVVNEKREVLVVQEKTGHFRGTGSWKFPTGVADQGEEIWEAAVREVKEEAGVDSEFVEVLAFRQSHASFFEKSDLFFVCLLRPVSSDIKIQEVEIEAGKWMPFDEYAAQPFMEKYELLRQINDIYLAKIDGHYSGFT--PVSTKSNFSNQKNSYLYLN 828
+L DDDY GVIVE+ MD+ F++ LR S W+ QGKKGVW+ LP+ NLVE +KEGF YHHAEP YLMLV+WI ++ +TIP NA+HRV VGA+V+N +E EK G G+G WK PTGV D+GEEI+ AA+REVKEE G+D+EF+E+LAF Q+H SFF KSDLFFVCLLRP S DI+ Q++EIEA +WM F++ A+QP K +L + I+ I K++ YSGF+ P++T F + K YLYLN
Sbjct: 19 VLPFVDDDYGGVIVEMK-TPMDTKNFVAALRDSFEQWRLQGKKGVWLNLPLSHVNLVEPAVKEGFRYHHAEPTYLMLVYWIPEAESTIPLNASHRVRVGAVVLNHNKE-----EKYGSLCGSGIWKIPTGVVDEGEEIFAAAIREVKEETGIDTEFLEILAFCQTHESFFAKSDLFFVCLLRPTSFDIQKQDLEIEAAQWMRFEDSASQPITHKNDLFKDIHHICSMKMEKSYSGFSKKPITT---FFDDKLGYLYLN 267
BLAST of Psat4g002800.1 vs. DB:Swiss
Match: NUDT7_ARATH (Nudix hydrolase 7 OS=Arabidopsis thaliana OX=3702 GN=NUDT7 PE=1 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 3.062e-90 Identity = 135/264 (51.14%), Postives = 183/264 (69.32%), Query Frame = 1 Query: 61 LLASTDDDYDGVIVEISDLVMDSTTFLSILRPSISNWKQQGKKGVWIKLPIHLANLVETLIKEGFWYHHAEPKYLMLVHWIADSANTIPANATHRVGVGALVVNEK-REVLVVQEKTGHFRGTGSWKFPTGVADQGEEIWEAAVREVKEEAGVDSEFVEVLAFRQSHASFF-EKSDLFFVCLLRPVSSDIKIQEVEIEAGKWMPFDEYAAQPFMEKYELLRQINDIYLAKIDGHYSGFTPVSTKSNFSNQKNSYLYLNVGGLKR 846
LL D+YDGV V + + MDS F LR S+S+W+++GKKG+WIKLP+ LANLVE + EGF YHHAEP+YLMLV WI+++ +TIPANA+H VG GALV+N+ +EVLVVQE++G F+ WK PTGV ++GE+IW REV+EE G+ ++FVEVLAFRQSH + +K+D+FF+C+L P S DI Q+ EI KWMP EY QP+ +K E+ + + +I K + Y GF V T + S+ K S++Y N KR
Sbjct: 10 LLEGETDNYDGVTVTMVE-PMDSEVFTESLRASLSHWREEGKKGIWIKLPLGLANLVEAAVSEGFRYHHAEPEYLMLVSWISETPDTIPANASHVVGAGALVINKNTKEVLVVQERSGFFKDKNVWKLPTGVINEGEDIWTGVAREVEEETGIIADFVEVLAFRQSHKAILKKKTDMFFLCVLSPRSYDITEQKSEILQAKWMPIQEYVDQPWNKKNEMFKFMANICQKKCEEEYLGFAIVPTTT--SSGKESFIYCNADHAKR 270
BLAST of Psat4g002800.1 vs. DB:Swiss
Match: NUDT8_ARATH (Nudix hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=NUDT8 PE=2 SV=2) HSP 1 Score: 262.307 bits (669), Expect = 5.207e-85 Identity = 129/258 (50.00%), Postives = 175/258 (67.83%), Query Frame = 1 Query: 61 LLASTDDDYDGVIVEISDLVMDSTTFLSILRPSISNWKQQGKKGVWIKLPIHLANLVETLIKEGFWYHHAEPKYLMLVHWIADS-ANTIPANATHRVGVGALVVNEKREVLVVQEKTGHFRGTGSWKFPTGVADQGEEIWEAAVREVKEEAGVDSEFVEVLAFRQSHASFFEKSDLFFVCLLRPVSSDIKIQEVEIEAGKWMPFDEYAAQPFMEKYELLRQINDIYLAKIDGHYSGFTPVSTKSNFSNQKNSYLYLNV 831
LL + DD+Y GVIV+ L + F S+LR S+S+W+++GKKGVW+KLP+ + LV IKEGF YHHAE Y+ML +WI + + +PANA+H+VGVG V+N+ +EVLVVQEK TG WK PTG ++ EEI+ AVREVKEE GVD+EF EV+AFR +H FEKSDLFF+C+LRP+S I I +EI+A KWMP E+ QP + ++ +++ +I A++ Y G +P S F + K S LY NV
Sbjct: 95 LLDAYDDEYGGVIVDHGKLPSNPYAFASMLRASLSDWRRKGKKGVWLKLPVEQSELVPIAIKEGFEYHHAEKGYVMLTYWIPEEEPSMLPANASHQVGVGGFVLNQHKEVLVVQEKYCAPSITGLWKLPTGFINESEEIFSGAVREVKEETGVDTEFSEVIAFRHAHNVAFEKSDLFFICMLRPLSDKIIIDALEIKAAKWMPLAEFVEQPMIRGDKMFKRVIEICEARLSHRYCGLSPHRLVSTF-DGKPSSLYYNV 351
BLAST of Psat4g002800.1 vs. DB:Swiss
Match: NUDT6_ARATH (Nudix hydrolase 6 OS=Arabidopsis thaliana OX=3702 GN=NUDT6 PE=1 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 1.600e-84 Identity = 133/260 (51.15%), Postives = 176/260 (67.69%), Query Frame = 1 Query: 61 LLASTDDDYDGVIVEISDLVMDSTTFLSILRPSISNWKQQGKKGVWIKLPIHLANLVETLIKEGFWYHHAEPKYLMLVHWIADSANTIPANATHRVGVGALVVNEK-REVLVVQEKTGHFRGTGSWKFPTGVADQGEEIWEAAVREVKEEAGVDSEFVEVLAFRQSHASFFE-KSDLFFVCLLRPVSSDIKIQEVEIEAGKWMPFDEYAAQPFMEKYELLRQINDIYLAKI-DGHYSGFTPVSTKSNFSNQKNSYLYLNV 831
LL D+Y GV V +++ M F+ LR S+ W QG KG+W+KL L NL+ EGF HHAE +Y ML WIAD +T+PANA+HR+GVGA V+N+K +EVLVVQE GHF+GTG WK PTGV +GE IWE A+REV+EE G+ ++FVEVLAFR+SH +F E K+D+FF+C L P + +IK Q+ EI A KWMP +EY QP+ +K EL R + +I L ++ + Y GF+ V T + S+ K SYLY N
Sbjct: 10 LLQGVPDNYGGVKVNLTE-PMTIEDFVPKLRASLVYWSNQGTKGIWLKLADGLDNLIAPAKAEGFVCHHAEREYTMLTSWIADVPSTLPANASHRIGVGAFVLNKKTKEVLVVQEIDGHFKGTGVWKLPTGVVKEGENIWEGALREVEEETGIKTKFVEVLAFRESHQAFLEIKTDIFFLCELEPTTFEIKKQDSEILAAKWMPIEEYVNQPWNQKKELFRFMANICLKRLQEMEYMGFSKVLTTT--SSGKESYLYCNT 266
BLAST of Psat4g002800.1 vs. DB:Swiss
Match: NUDT5_ARATH (Nudix hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=NUDT5 PE=2 SV=3) HSP 1 Score: 231.491 bits (589), Expect = 6.948e-74 Identity = 117/261 (44.83%), Postives = 167/261 (63.98%), Query Frame = 1 Query: 61 LLASTDDDYDGVIVEISDL-VMDSTTFLSILRPSISNWKQQGKKGVWIKLPIHLANLVETLIKEGFWYHHAEPKYLMLVHWIADSANTIPANATHRVGVGALVVNEKREVLVVQEKTGHFRGTGSWKFPTGVADQGEEIWEAAVREVKEEAGVDSEFVEVLAFRQSHASFFE-KSDLFFVCLLRPVSSDIKIQEVEIEAGKWMPFDEYAAQPFMEK--YELLRQINDIYLAKIDGHYSGFTPVSTKSNFSNQKNSYLYLNV 831
LL +D + G +V + ++ M F S L S+ WK QGKKG+WIKLP L++LV+T IK+GF YHHAE +Y+ML W+ + +T+P NA+HR+G+GA V+N+ E+LVVQE +G+F+ WK PTG +GE IW AVREVKEE +D+EFVEVL+F +SH + ++ K+D+FFVC L + +I+ Q+ EI A KWMP +EY QP+ K E+ + I +I L + Y+GF +N LY +V
Sbjct: 29 LLDGEEDRFGGTVVNLMEVESMTIGDFDSKLDVSLKAWKDQGKKGIWIKLPSELSSLVDTAIKKGFTYHHAENEYVMLTFWLPEPPSTLPCNASHRIGIGAFVLNKNGEMLVVQENSGYFKDKNVWKVPTGTIKEGESIWAGAVREVKEETDIDAEFVEVLSFMESHQAVWQRKTDIFFVCELEARTFEIQKQDSEIHAAKWMPVEEYVNQPYHNKEGNEMFKLIANICLKRSREKYTGFVLT------TNSAKKSLYCSV 283
BLAST of Psat4g002800.1 vs. DB:Swiss
Match: NUDT6_RAT (Nucleoside diphosphate-linked moiety X motif 6 OS=Rattus norvegicus OX=10116 GN=Nudt6 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.403e-37 Identity = 74/208 (35.58%), Postives = 115/208 (55.29%), Query Frame = 1 Query: 79 DDYDGVIVEISDLV----MDSTTFLSILRPSISNWKQQGKKGVWIKLPIHLANLVETLIKEGFWYHHAEPKYLMLVHWIADSANTIPANATHRVGV-GALVVNEKREVLVVQEKTGHFRGTGSWKFPTGVADQGEEIWEAAVREVKEEAGVDSEFVEVLAFRQSHAS--FFEKSDLFFVCLLRPVSSDIKIQEVEIEAGKWMPFDEYA 681
D + G+ V +S +D+ F +L+ +I W+ +G+ W+ +PI ++ + GF +HHAEP L W+ + + +P ATH+VGV GA+ R+VLVVQ++ + WKFP G+++ GE+I + AVREV EE GV SEF +L+ RQ H S F SD++ +C L+P S I + E +WM + A
Sbjct: 48 DRFGGISVHLSRHRTLHRLDAAAFRRLLQAAIQQWRAEGRIAAWLHIPILQSHFIAPAASLGFCFHHAEPHLSTLTLWLGEGPSRLPGYATHQVGVAGAVFDVSTRKVLVVQDRN---KLKNMWKFPGGLSEPGEDIGDTAVREVFEETGVKSEFRSLLSIRQQHRSPGAFGMSDMYLICRLQPRSFTINFCQQECLKCEWMDLESLA 252
BLAST of Psat4g002800.1 vs. DB:Swiss
Match: NUDT6_MOUSE (Nucleoside diphosphate-linked moiety X motif 6 OS=Mus musculus OX=10090 GN=Nudt6 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.979e-36 Identity = 74/208 (35.58%), Postives = 114/208 (54.81%), Query Frame = 1 Query: 79 DDYDGVIVEISDL----VMDSTTFLSILRPSISNWKQQGKKGVWIKLPIHLANLVETLIKEGFWYHHAEPKYLMLVHWIADSANTIPANATHRVGV-GALVVNEKREVLVVQEKTGHFRGTGSWKFPTGVADQGEEIWEAAVREVKEEAGVDSEFVEVLAFRQSHAS--FFEKSDLFFVCLLRPVSSDIKIQEVEIEAGKWMPFDEYA 681
D + GV V +S +D+ F +L+ +I W+ G+ W+ +PI ++ + GF +HHA+P L W+ + + +P ATH+VGV GA+ R+VLVVQ++ + WKFP G+++ GE+I + AVREV EE GV SEF +L+ RQ H S F SD++ VC L+P S I + E +W+ + A
Sbjct: 48 DRFGGVSVHLSRHHTLHGLDAAAFRRLLQAAIQQWRSDGRIAAWLHIPILQSHFIAPAASLGFCFHHAKPHSSTLTLWLGEGPSRLPGYATHQVGVAGAVFDVSTRKVLVVQDRN---KLKNMWKFPGGLSEPGEDIADTAVREVFEETGVKSEFRSLLSIRQQHRSPGAFGMSDMYLVCRLQPRSFTINFCQQECLKCEWIDLENLA 252
BLAST of Psat4g002800.1 vs. DB:Swiss
Match: NUDT6_HUMAN (Nucleoside diphosphate-linked moiety X motif 6 OS=Homo sapiens OX=9606 GN=NUDT6 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 9.895e-36 Identity = 70/208 (33.65%), Postives = 115/208 (55.29%), Query Frame = 1 Query: 79 DDYDGVIVEISDL----VMDSTTFLSILRPSISNWKQQGKKGVWIKLPIHLANLVETLIKEGFWYHHAEPKYLMLVHWIADSANTIPANATHRVGVGALVVNEK-REVLVVQEKTGHFRGTGSWKFPTGVADQGEEIWEAAVREVKEEAGVDSEFVEVLAFRQSHAS--FFEKSDLFFVCLLRPVSSDIKIQEVEIEAGKWMPFDEYA 681
D + G+ V ++ L +D+ F L+ ++ W+ +G+ VW+ +PI + + GF +HHAE L W+ + + +P A+H+VGV V +E R++LVVQ++ + WKFP G+++ E+I + AVREV EE G+ SEF VL+ RQ H + F KSD++ +C L+P S I + E +WM ++ A
Sbjct: 51 DRFGGISVRLARLDALDRLDAAAFQKGLQAAVQQWRSEGRTAVWLHIPILQSRFIAPAASLGFCFHHAESDSSTLTLWLREGPSRLPGYASHQVGVAGAVFDESTRKILVVQDRN---KLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPGAFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLA 255
BLAST of Psat4g002800.1 vs. DB:Swiss
Match: NUDT6_XENLA (Nucleoside diphosphate-linked moiety X motif 6 OS=Xenopus laevis OX=8355 GN=nudt6 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 4.909e-33 Identity = 65/157 (41.40%), Postives = 91/157 (57.96%), Query Frame = 1 Query: 220 ANLVETLIKEGFWYHHAEPKYLMLVHWIADSANTIPANATHRVGVGALVVNEKR-EVLVVQEKTGHFRGTGSWKFPTGVADQGEEIWEAAVREVKEEAGVDSEFVEVLAFRQ--SHASFFEKSDLFFVCLLRPVSSDIKIQEVEIEAGKWMPFDEYA 681
+ L+ EGF +HHAE L W+ D + +P ATH+VGV V++E +VLVVQ++ + +WKFP G++DQGE+I AVREV EE G+ SEF +L+ RQ +H F KSDL+ +C L+P+S I E +WM E A
Sbjct: 3 SRLISIAASEGFTFHHAERNESTLTLWLKDGPSKLPGYATHQVGVAGAVLDEDNGKVLVVQDRN---KTVNAWKFPGGLSDQGEDIGATAVREVLEETGIHSEFKSLLSIRQQHNHPGAFGKSDLYIICRLKPLSYTINFCHQECLKCEWMDLQELA 156 The following BLAST results are available for this feature:
BLAST of Psat4g002800.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g002800.1_Ps_Cameor_v1a ID=Psat4g002800.1_Ps_Cameor_v1a; Name=Psat4g002800.1; organism=Pisum sativum; type=mRNA; length=4113bpback to top protein sequence of Psat4g002800.1_Ps_Cameor_v1a >Psat4g002800.1_Ps_Cameor_v1a ID=Psat4g002800.1_Ps_Cameor_v1a; Name=Psat4g002800.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=287bpback to top mRNA from alignment at chr4LG4:3480229..3484341+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat4g002800.1_Ps_Cameor_v1a ID=Psat4g002800.1_Ps_Cameor_v1a; Name=Psat4g002800.1; organism=Pisum sativum; type=mRNA; length=4113bp; location=Sequence derived from: chr4LG4:3480229..3484341+ (Pisum sativumback to top Coding sequence (CDS) from alignment at chr4LG4:3480229..3484341+ >Psat4g002800.1_Ps_Cameor_v1a ID=Psat4g002800.1_Ps_Cameor_v1a; Name=Psat4g002800.1; organism=Pisum sativum; type=CDS; length=1722bp; location=Sequence derived from: chr4LG4:3480229..3484341+ (Pisum sativumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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