Psat4g004080.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat4g004080.1 vs. DB:Swiss
Match: CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana OX=3702 GN=CYS5 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 8.768e-30 Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 1
Query: 76 QAGGYSPIEDINDSHVIEIANFAVTQYDKQSGAKLKLNKVIKGESQVVAGTNYHLTLSAGEGS-VSKIYEAVVYEKLWLHFRNLTSFEPAQ 345
+ GG+SPI ++ D V+EI FAV++Y+K+S + LK V+ GE+QVV+GTNY L ++A +G VSK Y A+V++K W+ FRNLTSFEPA
Sbjct: 27 RVGGWSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVAANDGDGVSKNYLAIVWDKPWMKFRNLTSFEPAN 117
BLAST of Psat4g004080.1 vs. DB:Swiss
Match: CYT1_ACTDE (Cysteine proteinase inhibitor 1 OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.119e-28 Identity = 48/96 (50.00%), Postives = 71/96 (73.96%), Query Frame = 1
Query: 49 VSARKLSSPQAGGYSPIEDINDSHVIEIANFAVTQYDKQSGAKLKLNKVIKGESQVVAGTNYHLTLSAGEGSVSKIYEAVVYEKLWLHFRNLTSFE 336
V RKL + AGG+ PIE +N + V ++A FAV++++KQ+ +L+ V++G +QVVAGTNY L ++A +G+V YEAVV++K W+HFRNLTSF
Sbjct: 21 VGGRKLVA--AGGWRPIESLNSAEVQDVAQFAVSEHNKQANDELQYQSVVRGYTQVVAGTNYRLVIAAKDGAVVGNYEAVVWDKPWMHFRNLTSFR 114
BLAST of Psat4g004080.1 vs. DB:Swiss
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0803200 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 2.561e-22 Identity = 41/99 (41.41%), Postives = 65/99 (65.66%), Query Frame = 1
Query: 61 KLSS---PQAGGYSPIEDINDSHVIEIANFAVTQYDKQSGAKLKLNKVIKGESQVVAGTNYHLTLSAGEGSVSKIYEAVVYEKLWLHFRNLTSFEPAQA 348
K+SS P GG P+ + ND H++++A FAVT+++K++ + L+ K++ + QVVAGT Y+ T+ EG K+YEA V+EK W+ F+ L F+P A
Sbjct: 38 KMSSDGGPVLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPVDA 136
BLAST of Psat4g004080.1 vs. DB:Swiss
Match: CYT8_ORYSJ (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0429000 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.470e-21 Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 1
Query: 49 VSARKLSSPQAGGYSPIEDINDSHVIEIANFAVTQYDKQSGAKLKLNKVIKGESQVVAGTNYHLTLSAGE-GSVSKIYEAVVYEKLWLHFRNLTSFEPAQA 348
V + P GG+SPI D+ D H+ E+ +AV ++ S L+ +V GE QVV+G NY L +SA + + Y AVVYE+ W + R LTSF+PA A
Sbjct: 22 VGGNRGHGPLVGGWSPITDVGDPHIQELGGWAVERHASLSSDGLRFRRVTSGEQQVVSGMNYRLVVSASDPAGATASYVAVVYEQSWTNTRQLTSFKPAAA 122
BLAST of Psat4g004080.1 vs. DB:Swiss
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays OX=4577 GN=RAMDAZC7 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.976e-18 Identity = 39/93 (41.94%), Postives = 62/93 (66.67%), Query Frame = 1
Query: 79 AGGYSPIEDI----NDSHVIEIANFAVTQYDKQSGAKLKLNKVIKGESQVVAGTNYHLTLSAGEGSVSKIYEAVVYEKLWLHFRNLTSFEPAQ 345
AGG I+D+ ND + E+A FAV ++++++ A L K++K ++QVVAGT Y+LT+ +G V K+YEA V+EK W +F+ L F+P +
Sbjct: 41 AGG---IKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPVE 130
BLAST of Psat4g004080.1 vs. DB:Swiss
Match: CYT4_ARATH (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana OX=3702 GN=CYS4 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 5.084e-18 Identity = 37/82 (45.12%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 94 PIEDINDSHVIEIANFAVTQYDKQSGAKLKLNKVIKGESQVVAGTNYHLTLSAGEGSVS-KIYEAVVYEKLWLHFRNLTSFE 336
PI++++D V+ +A +A+ +++K+S KL KV++G +QVV+GT Y L ++A +G K YEAVV EKLWLH ++L SF+
Sbjct: 34 PIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTKYDLKIAAKDGGGKIKNYEAVVVEKLWLHSKSLESFK 115
BLAST of Psat4g004080.1 vs. DB:Swiss
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare OX=4513 GN=ICY PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.009e-17 Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 1
Query: 91 SPIEDINDSHVIEIANFAVTQYDKQSGAKLKLNKVIKGESQVVAGTNYHLTLSAGEGSVSKIYEAVVYEKLWLHFRNLTSFEPA 342
+P ND IE+A FAV +++ ++ A L+ K++K QVVAG ++ T+ EG K+YEA V+EK W +F+ L F+PA
Sbjct: 23 APAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKPA 106
BLAST of Psat4g004080.1 vs. DB:Swiss
Match: CYT6_ORYSJ (Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0210200 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.213e-16 Identity = 36/87 (41.38%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 85 GYSPIEDINDSHVIEIANFAVTQYDKQSGA-KLKLNKVIKGESQVVAGTNYHLTLSA--GEGSVSKIYEAVVYEKLWLHFRNLTSFE 336
G+SPI++I+D H+ E+ +A+T+ ++ S + +L ++V GE QVV+G NY L + A G G V+ Y AVV+E+ W + R L SF+
Sbjct: 22 GWSPIKNIDDPHIQELGRWAITENNRVSPSDELTFHRVTGGEQQVVSGMNYRLEIEAASGGGDVTGSYGAVVFEQEWSNTRKLISFD 108
BLAST of Psat4g004080.1 vs. DB:Swiss
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=CYS3 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 6.873e-16 Identity = 36/88 (40.91%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 82 GGYSPIEDINDSHVIE-IANFAVTQYDKQSGAKLKLNKVIKGESQVVAGTNYHLTLSAGEGSVSKIYEAVVYEKLWLHFRNLTSFEPA 342
GG + +S IE +A FA+ +++KQ L+ K++K QVVAGT YHLTL A EG +K +EA V+ K W++F+ L F+ +
Sbjct: 36 GGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEFKES 123
BLAST of Psat4g004080.1 vs. DB:Swiss
Match: CYTA_HELAN (Cysteine proteinase inhibitor A OS=Helianthus annuus OX=4232 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.128e-15 Identity = 33/77 (42.86%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 118 HVIEIANFAVTQYDKQSGAKLKLNKVIKGESQVVAGTNYHLTLSAGEGSVSKIYEAVVYEKLWLHFRNLTSFEPAQA 348
+ E+A FAV +++K+ A L+ KV+ + QVVAG Y++TL A G V K YEA V+ K W +F+ L F+P A
Sbjct: 3 EIDELARFAVDEHNKKQNALLEFGKVVNTKEQVVAGKMYYITLEATNGGVKKTYEAKVWVKPWENFKELQEFKPVDA 79 The following BLAST results are available for this feature:
BLAST of Psat4g004080.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g004080.1_Ps_Cameor_v1a ID=Psat4g004080.1_Ps_Cameor_v1a; Name=Psat4g004080.1; organism=Pisum sativum; type=mRNA; length=1261bpback to top protein sequence of Psat4g004080.1_Ps_Cameor_v1a >Psat4g004080.1_Ps_Cameor_v1a ID=Psat4g004080.1_Ps_Cameor_v1a; Name=Psat4g004080.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=117bpback to top mRNA from alignment at chr4LG4:4444364..4445624- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat4g004080.1_Ps_Cameor_v1a ID=Psat4g004080.1_Ps_Cameor_v1a; Name=Psat4g004080.1; organism=Pisum sativum; type=mRNA; length=1261bp; location=Sequence derived from: chr4LG4:4444364..4445624- (Pisum sativumback to top Coding sequence (CDS) from alignment at chr4LG4:4444364..4445624- >Psat4g004080.1_Ps_Cameor_v1a ID=Psat4g004080.1_Ps_Cameor_v1a; Name=Psat4g004080.1; organism=Pisum sativum; type=CDS; length=702bp; location=Sequence derived from: chr4LG4:4444364..4445624- (Pisum sativumback to top |