Psat4g005720.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat4g005720.1 vs. DB:Swiss
Match: WRKY6_ARATH (WRKY transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=WRKY6 PE=1 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 2.001e-83 Identity = 162/259 (62.55%), Postives = 193/259 (74.52%), Query Frame = 1 Query: 262 EPNKVPRLNPSNAS--DQAAAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPLXXXXXXXXXXXXXXXXVLLSGSMSSADGVVNP-NLLSRILPNCSSSMATLSATAPFPTVTLDLXX-------XXXXXXXXXXXXXXFQLGQPQ-------NFGSGQLPQVIAQALYNQSKFSGLQLSQDVGGSSQLHSTQQASSLS---AAITADPNF 978
E NK+ ++N + + DQ A EATMRKARVSVRARSEA MI+DGCQWRKYGQKMAKGNPCPRAYYRCTMA GCPVRKQVQRCAED++ILITTYEG H+HPLPPAA+ MASTT AAA +LLSGSMSS DG++NP NLL+R + CS+SMAT+SA+APFPTVTLDLTH + ++ N++ + +PQ N G LP VI QALYNQSKFSGLQ S GGS + Q+ +++ A+TADPNF
Sbjct: 272 ESNKIQKVNSTTPTTFDQTA-EATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMATGCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAAVAMASTTTAAANMLLSGSMSSHDGMMNPTNLLARAVLPCSTSMATISASAPFPTVTLDLTHSPPPPNGSNPSSSAATNNNHNSLMQRPQQQQQQMTNLPPGMLPHVIGQALYNQSKFSGLQFS---GGSPSTAAFSQSHAVADTITALTADPNF 526
BLAST of Psat4g005720.1 vs. DB:Swiss
Match: WRK42_ARATH (WRKY transcription factor 42 OS=Arabidopsis thaliana OX=3702 GN=WRKY42 PE=1 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 6.774e-82 Identity = 163/260 (62.69%), Postives = 190/260 (73.08%), Query Frame = 1 Query: 259 WE-PNKVPRLNPS----------NAS----DQAAAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPLXXXXXXXXXXXXXXXXVLLSGS-MSSADGVVNP-NLLSRILPNCSSSMATLSATAPFPTVTLDLXXXXXXXXXXXXXXXXF-QLGQPQNFGSGQLPQVIAQALY--NQSKFSGLQLSQDVGGSSQLHSTQQASSLSAAITADPNF 978
W PNKVP+ + S NAS +QAAAEATMRKARVSVRARSEA M++DGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAED+TILITTYEG H+HPLPPAAM MASTT AAA++LLSGS MS+ DG++NP NLL+R + CSSSMAT+SA+APFPT+TLDLT NN N QF Q LP ++ QALY QSKFSGL + S L++ + S+ +AAI ++PNF
Sbjct: 237 WRNPNKVPKHHASSSICGGNGSENASSKVIEQAAAEATMRKARVSVRARSEAPMLSDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMNMASTTTAAASMLLSGSTMSNQDGLMNPTNLLARTILPCSSSMATISASAPFPTITLDLTESPNGNNPTNNPLMQFSQRSGLVELNQSVLPHMMGQALYYNQQSKFSGLHMP-----SQPLNAGESVSAATAAIASNPNF 491
BLAST of Psat4g005720.1 vs. DB:Swiss
Match: WRK31_ARATH (Probable WRKY transcription factor 31 OS=Arabidopsis thaliana OX=3702 GN=WRKY31 PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 7.101e-75 Identity = 166/257 (64.59%), Postives = 197/257 (76.65%), Query Frame = 1 Query: 259 W-EPNKVPRLNPSNAS----------DQAAAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPLXXXXXXXXXXXXXXXXVLLSGSMSSADGVVNP-NLLSRILPNCSSSMATLSATAPFPTVTLDLXXXXXXXXXXXXXXXXF-QLGQPQNFGSGQLPQVIAQALYN---QSKFSGLQL-SQDVGGSSQLHSTQQASSLSAAITADPNF 978
W PNKVP+ NPS+++ DQ+AAEATMRKARVSVRARSEA MI+DGCQWRKYGQKMAKGNPCPRAYYRCTMA GCPVRKQVQRCAED++ILITTYEG H+HPLPPAA MASTT AAA++LLSGSMSS DG++NP NLL+R + CSSSMAT+SA+APFPT+TLDLT+ NN N +++ Q Q F LPQV+ QA+YN QSKFSGLQL +Q + ++ + S+ SAAI +DPNF
Sbjct: 246 WGNPNKVPKHNPSSSNSNGNRNGNVIDQSAAEATMRKARVSVRARSEAAMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAGGCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAATAMASTTTAAASMLLSGSMSSQDGLMNPTNLLARAILPCSSSMATISASAPFPTITLDLTNSPNGNNPNMTTNNPLMQFAQRPGFNPAVLPQVVGQAMYNNQQQSKFSGLQLPAQPLQIAATSSVAESVSAASAAIASDPNF 502
BLAST of Psat4g005720.1 vs. DB:Swiss
Match: WRK47_ARATH (Probable WRKY transcription factor 47 OS=Arabidopsis thaliana OX=3702 GN=WRKY47 PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 5.764e-47 Identity = 108/188 (57.45%), Postives = 129/188 (68.62%), Query Frame = 1 Query: 217 KETDPDSTDQLVQVWEPNKVPRLNPSNASDQAAAE-----ATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPLXXXXXXXXXXXXXXXXVLLSGSMSSADG-------VVNPNLLSRILPNCSSSMATLSATAPFPTVTLDL 744
K PD D K PR++ + +++ + RKARVSVRARS+A +NDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAED TIL TTYEG H+HPLPP+A MA+TT+AAA +LLSGS SS + + P +S++ATLSA+APFPT+TLDL
Sbjct: 180 KRRSPDDVDGRDMHRGSPKTPRIDQNKSTNHEEQQNPHDQLPYRKARVSVRARSDATTVNDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDTTILTTTYEGNHNHPLPPSATAMAATTSAAAAMLLSGSSSSNLHQTLSSPSATSSSSFYHNFP-YTSTIATLSASAPFPTITLDL 366
BLAST of Psat4g005720.1 vs. DB:Swiss
Match: WRKY9_ARATH (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=WRKY9 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.021e-40 Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 1 Query: 331 RKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPL 558
RKARVSVRAR E +NDGCQWRKYGQK AKGNPCPRAYYRCT+A GCPVRKQVQRC ED +ILITTYEGTH+HPL
Sbjct: 219 RKARVSVRARCETATMNDGCQWRKYGQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPL 294
BLAST of Psat4g005720.1 vs. DB:Swiss
Match: WRK72_ARATH (Probable WRKY transcription factor 72 OS=Arabidopsis thaliana OX=3702 GN=WRKY72 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.773e-40 Identity = 86/174 (49.43%), Postives = 113/174 (64.94%), Query Frame = 1 Query: 253 QVWEPNKV--PRLNPS-----NASDQAAAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSH--PLXXXXXXXXXXXXXXXXVLLSGSMSSADGVVNPNLLSRILPNCSSSMATLSATAPF-PTVTLDL 744
+ W P KV R +P+ +A +A + +++ARV VRAR + +NDGCQWRKYGQK+AKGNPCPRAYYRCT+A GCPVRKQVQRCA+D +ILITTYEGTHSH PL M ++ AA+ + S S +A+ + N + N + S + + +P PTVTLDL
Sbjct: 178 EAWAPGKVTGKRSSPAPASGGDADGEAGQQNHVKRARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCADDMSILITTYEGTHSHSLPLSATTMASTTSAAASMLLSGSSSSPAAEMIGNNLYDNSRFNNNNKSFYSPTLHSPLHPTVTLDL 351
BLAST of Psat4g005720.1 vs. DB:Swiss
Match: WRK61_ARATH (Probable WRKY transcription factor 61 OS=Arabidopsis thaliana OX=3702 GN=WRKY61 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.931e-39 Identity = 84/145 (57.93%), Postives = 107/145 (73.79%), Query Frame = 1 Query: 328 MRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPLXXXXXXXXXXXXXXXXVLLSGSMSSADGVVNPNLL------SRILPNCSSSMATLSATAPFPTVTLDL 744
++K RVSVR+R E +NDGCQWRKYGQK+AKGNPCPRAYYRCT+A CPVRKQVQRC+ED +ILI+TYEGTH+HPLP +A MAS T+AAA++LLSG+ SS+ + + L + I P + +++ PTVTLDL
Sbjct: 174 VKKTRVSVRSRCETPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHPLPMSATAMASATSAAASMLLSGASSSSSAAADLHGLNFSLSGNNITPKPKTHFLQSPSSSGHPTVTLDL 318
BLAST of Psat4g005720.1 vs. DB:Swiss
Match: WRK36_ARATH (Probable WRKY transcription factor 36 OS=Arabidopsis thaliana OX=3702 GN=WRKY36 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.162e-30 Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 328 MRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKT-ILITTYEGTHSHPL 558
++K RV V+A E INDGCQWRKYGQK AK NP PRAYYRC+M+ CPVRKQVQRC E++T +TTYEG H HPL
Sbjct: 186 LKKTRVCVKASCEDPSINDGCQWRKYGQKTAKTNPLPRAYYRCSMSSNCPVRKQVQRCGEEETSAFMTTYEGNHDHPL 263
BLAST of Psat4g005720.1 vs. DB:Swiss
Match: WRK71_ORYSI (WRKY transcription factor WRKY71 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY71 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.578e-24 Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 1 Query: 373 MINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSH 552
++ DG QWRKYGQK+ K NPCPRAY+RC+ A CPV+K+VQR AED TIL+ TYEG H+H
Sbjct: 191 VVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSAEDNTILVATYEGEHNH 250
BLAST of Psat4g005720.1 vs. DB:Swiss
Match: WRK71_ORYSJ (WRKY transcription factor WRKY71 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY71 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.909e-24 Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 1 Query: 373 MINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSH 552
++ DG QWRKYGQK+ K NPCPRAY+RC+ A CPV+K+VQR AED TIL+ TYEG H+H
Sbjct: 191 VVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSAEDNTILVATYEGEHNH 250 The following BLAST results are available for this feature:
BLAST of Psat4g005720.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat4g005720.1_Ps_Cameor_v1a ID=Psat4g005720.1_Ps_Cameor_v1a; Name=Psat4g005720.1; organism=Pisum sativum; type=mRNA; length=2405bpback to top protein sequence of Psat4g005720.1_Ps_Cameor_v1a >Psat4g005720.1_Ps_Cameor_v1a ID=Psat4g005720.1_Ps_Cameor_v1a; Name=Psat4g005720.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=363bpback to top mRNA from alignment at chr4LG4:6148680..6151084+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat4g005720.1_Ps_Cameor_v1a ID=Psat4g005720.1_Ps_Cameor_v1a; Name=Psat4g005720.1; organism=Pisum sativum; type=mRNA; length=2405bp; location=Sequence derived from: chr4LG4:6148680..6151084+ (Pisum sativumback to top Coding sequence (CDS) from alignment at chr4LG4:6148680..6151084+ >Psat4g005720.1_Ps_Cameor_v1a ID=Psat4g005720.1_Ps_Cameor_v1a; Name=Psat4g005720.1; organism=Pisum sativum; type=CDS; length=2178bp; location=Sequence derived from: chr4LG4:6148680..6151084+ (Pisum sativumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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