Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
Feature Name Unique Name Species Type
Psat4g005720.1 Psat4g005720.1_Ps_Cameor_v1a-protein Pisum sativum polypeptide Psat4g005720.1_Ps_Cameor_v1a Psat4g005720.1_Ps_Cameor_v1a Pisum sativum polypeptide
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g005720.1.five_prime_utr1 Psat4g005720.1.five_prime_utr1_Ps_Cameor_v1a Pisum sativum five_prime_UTR
The following exon feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g005720.1.exon1 Psat4g005720.1.exon1_Ps_Cameor_v1a Pisum sativum exon Psat4g005720.1.exon2 Psat4g005720.1.exon2_Ps_Cameor_v1a Pisum sativum exon Psat4g005720.1.exon3 Psat4g005720.1.exon3_Ps_Cameor_v1a Pisum sativum exon Psat4g005720.1.exon4 Psat4g005720.1.exon4_Ps_Cameor_v1a Pisum sativum exon
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g005720.1.cds1 Psat4g005720.1.cds1_Ps_Cameor_v1a Pisum sativum CDS Psat4g005720.1.cds2 Psat4g005720.1.cds2_Ps_Cameor_v1a Pisum sativum CDS Psat4g005720.1.cds3 Psat4g005720.1.cds3_Ps_Cameor_v1a Pisum sativum CDS Psat4g005720.1.cds4 Psat4g005720.1.cds4_Ps_Cameor_v1a Pisum sativum CDS
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type
Psat4g005720.1.three_prime_utr1 Psat4g005720.1.three_prime_utr1_Ps_Cameor_v1a Pisum sativum three_prime_UTR
Homology
BLAST of Psat4g005720.1 vs. DB:Swiss
Match:
WRKY6_ARATH (WRKY transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=WRKY6 PE=1 SV=1)
HSP 1 Score: 266.929 bits (681), Expect = 2.001e-83
Identity = 162/259 (62.55%), Postives = 193/259 (74.52%), Query Frame = 1
Query: 262 EPNKVPRLNPSNAS--DQAAAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPLXXXXXXXXXXXXXXXXVLLSGSMSSADGVVNP-NLLSRILPNCSSSMATLSATAPFPTVTLDLXX-------XXXXXXXXXXXXXXFQLGQPQ-------NFGSGQLPQVIAQALYNQSKFSGLQLSQDVGGSSQLHSTQQASSLS---AAITADPNF 978
E NK+ ++N + + DQ A EATMRKARVSVRARSEA MI+DGCQWRKYGQKMAKGNPCPRAYYRCTMA GCPVRKQVQRCAED++ILITTYEG H+HPLPPAA+ MASTT AAA +LLSGSMSS DG++NP NLL+R + CS+SMAT+SA+APFPTVTLDLTH + ++ N++ + +PQ N G LP VI QALYNQSKFSGLQ S GGS + Q+ +++ A+TADPNF
Sbjct: 272 ESNKIQKVNSTTPTTFDQTA-EATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMATGCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAAVAMASTTTAAANMLLSGSMSSHDGMMNPTNLLARAVLPCSTSMATISASAPFPTVTLDLTHSPPPPNGSNPSSSAATNNNHNSLMQRPQQQQQQMTNLPPGMLPHVIGQALYNQSKFSGLQFS---GGSPSTAAFSQSHAVADTITALTADPNF 526
BLAST of Psat4g005720.1 vs. DB:Swiss
Match:
WRK42_ARATH (WRKY transcription factor 42 OS=Arabidopsis thaliana OX=3702 GN=WRKY42 PE=1 SV=1)
HSP 1 Score: 262.307 bits (669), Expect = 6.774e-82
Identity = 163/260 (62.69%), Postives = 190/260 (73.08%), Query Frame = 1
Query: 259 WE-PNKVPRLNPS----------NAS----DQAAAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPLXXXXXXXXXXXXXXXXVLLSGS-MSSADGVVNP-NLLSRILPNCSSSMATLSATAPFPTVTLDLXXXXXXXXXXXXXXXXF-QLGQPQNFGSGQLPQVIAQALY--NQSKFSGLQLSQDVGGSSQLHSTQQASSLSAAITADPNF 978
W PNKVP+ + S NAS +QAAAEATMRKARVSVRARSEA M++DGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAED+TILITTYEG H+HPLPPAAM MASTT AAA++LLSGS MS+ DG++NP NLL+R + CSSSMAT+SA+APFPT+TLDLT NN N QF Q LP ++ QALY QSKFSGL + S L++ + S+ +AAI ++PNF
Sbjct: 237 WRNPNKVPKHHASSSICGGNGSENASSKVIEQAAAEATMRKARVSVRARSEAPMLSDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMNMASTTTAAASMLLSGSTMSNQDGLMNPTNLLARTILPCSSSMATISASAPFPTITLDLTESPNGNNPTNNPLMQFSQRSGLVELNQSVLPHMMGQALYYNQQSKFSGLHMP-----SQPLNAGESVSAATAAIASNPNF 491
BLAST of Psat4g005720.1 vs. DB:Swiss
Match:
WRK31_ARATH (Probable WRKY transcription factor 31 OS=Arabidopsis thaliana OX=3702 GN=WRKY31 PE=2 SV=1)
HSP 1 Score: 244.202 bits (622), Expect = 7.101e-75
Identity = 166/257 (64.59%), Postives = 197/257 (76.65%), Query Frame = 1
Query: 259 W-EPNKVPRLNPSNAS----------DQAAAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPLXXXXXXXXXXXXXXXXVLLSGSMSSADGVVNP-NLLSRILPNCSSSMATLSATAPFPTVTLDLXXXXXXXXXXXXXXXXF-QLGQPQNFGSGQLPQVIAQALYN---QSKFSGLQL-SQDVGGSSQLHSTQQASSLSAAITADPNF 978
W PNKVP+ NPS+++ DQ+AAEATMRKARVSVRARSEA MI+DGCQWRKYGQKMAKGNPCPRAYYRCTMA GCPVRKQVQRCAED++ILITTYEG H+HPLPPAA MASTT AAA++LLSGSMSS DG++NP NLL+R + CSSSMAT+SA+APFPT+TLDLT+ NN N +++ Q Q F LPQV+ QA+YN QSKFSGLQL +Q + ++ + S+ SAAI +DPNF
Sbjct: 246 WGNPNKVPKHNPSSSNSNGNRNGNVIDQSAAEATMRKARVSVRARSEAAMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAGGCPVRKQVQRCAEDRSILITTYEGNHNHPLPPAATAMASTTTAAASMLLSGSMSSQDGLMNPTNLLARAILPCSSSMATISASAPFPTITLDLTNSPNGNNPNMTTNNPLMQFAQRPGFNPAVLPQVVGQAMYNNQQQSKFSGLQLPAQPLQIAATSSVAESVSAASAAIASDPNF 502
BLAST of Psat4g005720.1 vs. DB:Swiss
Match:
WRK47_ARATH (Probable WRKY transcription factor 47 OS=Arabidopsis thaliana OX=3702 GN=WRKY47 PE=1 SV=2)
HSP 1 Score: 169.474 bits (428), Expect = 5.764e-47
Identity = 108/188 (57.45%), Postives = 129/188 (68.62%), Query Frame = 1
Query: 217 KETDPDSTDQLVQVWEPNKVPRLNPSNASDQAAAE-----ATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPLXXXXXXXXXXXXXXXXVLLSGSMSSADG-------VVNPNLLSRILPNCSSSMATLSATAPFPTVTLDL 744
K PD D K PR++ + +++ + RKARVSVRARS+A +NDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAED TIL TTYEG H+HPLPP+A MA+TT+AAA +LLSGS SS + + P +S++ATLSA+APFPT+TLDL
Sbjct: 180 KRRSPDDVDGRDMHRGSPKTPRIDQNKSTNHEEQQNPHDQLPYRKARVSVRARSDATTVNDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDTTILTTTYEGNHNHPLPPSATAMAATTSAAAAMLLSGSSSSNLHQTLSSPSATSSSSFYHNFP-YTSTIATLSASAPFPTITLDL 366
BLAST of Psat4g005720.1 vs. DB:Swiss
Match:
WRKY9_ARATH (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=WRKY9 PE=2 SV=1)
HSP 1 Score: 150.214 bits (378), Expect = 1.021e-40
Identity = 64/76 (84.21%), Postives = 68/76 (89.47%), Query Frame = 1
Query: 331 RKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPL 558
RKARVSVRAR E +NDGCQWRKYGQK AKGNPCPRAYYRCT+A GCPVRKQVQRC ED +ILITTYEGTH+HPL
Sbjct: 219 RKARVSVRARCETATMNDGCQWRKYGQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPL 294
BLAST of Psat4g005720.1 vs. DB:Swiss
Match:
WRK72_ARATH (Probable WRKY transcription factor 72 OS=Arabidopsis thaliana OX=3702 GN=WRKY72 PE=2 SV=1)
HSP 1 Score: 153.295 bits (386), Expect = 1.773e-40
Identity = 86/174 (49.43%), Postives = 113/174 (64.94%), Query Frame = 1
Query: 253 QVWEPNKV--PRLNPS-----NASDQAAAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSH--PLXXXXXXXXXXXXXXXXVLLSGSMSSADGVVNPNLLSRILPNCSSSMATLSATAPF-PTVTLDL 744
+ W P KV R +P+ +A +A + +++ARV VRAR + +NDGCQWRKYGQK+AKGNPCPRAYYRCT+A GCPVRKQVQRCA+D +ILITTYEGTHSH PL M ++ AA+ + S S +A+ + N + N + S + + +P PTVTLDL
Sbjct: 178 EAWAPGKVTGKRSSPAPASGGDADGEAGQQNHVKRARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCADDMSILITTYEGTHSHSLPLSATTMASTTSAAASMLLSGSSSSPAAEMIGNNLYDNSRFNNNNKSFYSPTLHSPLHPTVTLDL 351
BLAST of Psat4g005720.1 vs. DB:Swiss
Match:
WRK61_ARATH (Probable WRKY transcription factor 61 OS=Arabidopsis thaliana OX=3702 GN=WRKY61 PE=2 SV=1)
HSP 1 Score: 147.132 bits (370), Expect = 9.931e-39
Identity = 84/145 (57.93%), Postives = 107/145 (73.79%), Query Frame = 1
Query: 328 MRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSHPLXXXXXXXXXXXXXXXXVLLSGSMSSADGVVNPNLL------SRILPNCSSSMATLSATAPFPTVTLDL 744
++K RVSVR+R E +NDGCQWRKYGQK+AKGNPCPRAYYRCT+A CPVRKQVQRC+ED +ILI+TYEGTH+HPLP +A MAS T+AAA++LLSG+ SS+ + + L + I P + +++ PTVTLDL
Sbjct: 174 VKKTRVSVRSRCETPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHPLPMSATAMASATSAAASMLLSGASSSSSAAADLHGLNFSLSGNNITPKPKTHFLQSPSSSGHPTVTLDL 318
BLAST of Psat4g005720.1 vs. DB:Swiss
Match:
WRK36_ARATH (Probable WRKY transcription factor 36 OS=Arabidopsis thaliana OX=3702 GN=WRKY36 PE=2 SV=1)
HSP 1 Score: 122.094 bits (305), Expect = 4.162e-30
Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 1
Query: 328 MRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKT-ILITTYEGTHSHPL 558
++K RV V+A E INDGCQWRKYGQK AK NP PRAYYRC+M+ CPVRKQVQRC E++T +TTYEG H HPL
Sbjct: 186 LKKTRVCVKASCEDPSINDGCQWRKYGQKTAKTNPLPRAYYRCSMSSNCPVRKQVQRCGEEETSAFMTTYEGNHDHPL 263
BLAST of Psat4g005720.1 vs. DB:Swiss
Match:
WRK71_ORYSI (WRKY transcription factor WRKY71 OS=Oryza sativa subsp. indica OX=39946 GN=WRKY71 PE=1 SV=1)
HSP 1 Score: 104.76 bits (260), Expect = 4.578e-24
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 1
Query: 373 MINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSH 552
++ DG QWRKYGQK+ K NPCPRAY+RC+ A CPV+K+VQR AED TIL+ TYEG H+H
Sbjct: 191 VVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSAEDNTILVATYEGEHNH 250
BLAST of Psat4g005720.1 vs. DB:Swiss
Match:
WRK71_ORYSJ (WRKY transcription factor WRKY71 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY71 PE=1 SV=1)
HSP 1 Score: 104.76 bits (260), Expect = 4.909e-24
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 1
Query: 373 MINDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGTHSH 552
++ DG QWRKYGQK+ K NPCPRAY+RC+ A CPV+K+VQR AED TIL+ TYEG H+H
Sbjct: 191 VVKDGYQWRKYGQKVTKDNPCPRAYFRCSFAPACPVKKKVQRSAEDNTILVATYEGEHNH 250
The following BLAST results are available for this feature:
BLAST of Psat4g005720.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (
BLAST: P. sativum Cameor genome v1a vs. Swissprot )
Total hits: 10
200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2400 Expect = 2.00e-83 / Id = 62.55 Expect = 6.77e-82 / Id = 62.69 Expect = 7.10e-75 / Id = 64.59 Expect = 5.76e-47 / Id = 57.45 Expect = 1.02e-40 / Id = 84.21 Expect = 1.77e-40 / Id = 49.43 Expect = 9.93e-39 / Id = 57.93 Expect = 4.16e-30 / Id = 66.67 Expect = 4.58e-24 / Id = 66.67 Expect = 4.91e-24 / Id = 66.67 Sequence WRKY6_ARATH WRK42_ARATH WRK31_ARATH WRK47_ARATH WRKY9_ARATH WRK72_ARATH WRK61_ARATH WRK36_ARATH WRK71_ORYSI WRK71_ORYSJ
Match Name E-value Identity Description
WRKY6_ARATH 2.001e-83 62.55 WRKY transcription factor 6 OS=Arabidopsis thalian... [more] WRK42_ARATH 6.774e-82 62.69 WRKY transcription factor 42 OS=Arabidopsis thalia... [more] WRK31_ARATH 7.101e-75 64.59 Probable WRKY transcription factor 31 OS=Arabidops... [more] WRK47_ARATH 5.764e-47 57.45 Probable WRKY transcription factor 47 OS=Arabidops... [more] WRKY9_ARATH 1.021e-40 84.21 Probable WRKY transcription factor 9 OS=Arabidopsi... [more] WRK72_ARATH 1.773e-40 49.43 Probable WRKY transcription factor 72 OS=Arabidops... [more] WRK61_ARATH 9.931e-39 57.93 Probable WRKY transcription factor 61 OS=Arabidops... [more] WRK36_ARATH 4.162e-30 66.67 Probable WRKY transcription factor 36 OS=Arabidops... [more] WRK71_ORYSI 4.578e-24 66.67 WRKY transcription factor WRKY71 OS=Oryza sativa s... [more] WRK71_ORYSJ 4.909e-24 66.67 WRKY transcription factor WRKY71 OS=Oryza sativa s... [more]
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Sequences
The
following sequences are available for this feature:
mRNA sequence
>Psat4g005720.1_Ps_Cameor_v1a ID=Psat4g005720.1_Ps_Cameor_v1a; Name=Psat4g005720.1; organism=Pisum sativum; type=mRNA; length=2405bp back to top protein sequence of Psat4g005720.1_Ps_Cameor_v1a
>Psat4g005720.1_Ps_Cameor_v1a ID=Psat4g005720.1_Ps_Cameor_v1a; Name=Psat4g005720.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=363bp back to top mRNA from alignment at chr4LG4:6148680..6151084+
Legend: five_prime_UTR exon polypeptide CDS three_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat4g005720.1_Ps_Cameor_v1a ID=Psat4g005720.1_Ps_Cameor_v1a; Name=Psat4g005720.1; organism=Pisum sativum; type=mRNA; length=2405bp; location=Sequence derived from: chr4LG4:6148680..6151084+ (Pisum sativumTGCATTTGGTTTATATTGTCCCATGTAAACCCTTTTTATAGGCGATGCAA
TTGCAGCGGGTAGAAGACTTCAGAGACTTGATAATAACCCATACACTTCT
CTTTTCTTTTCTCTCTCTTTGACTTCGTCACTCTCTTCTTCTTTCTTCTC
CACCTCTCCATTTTTCTTTCTATATATTTTTCCCATTCTGTCTTCTTTCT
TTTCATTCATCTTTCTATTACTATACTACATAATAACAAAGAATGAGATC
TTCTCAATAATGAATTCAAGAGAATTGAACATGATGAAATTTCCAATGAG
TTTGATTAGCACCTGGTCTGAAGATCATGACGATGATCAAGATCATGATC
ATGATCATCGGCGCAGTCGCGTTATTGTCGACGAAGTCGATTTTTTCTCC
GATAGGAAGGAGAAATCGTCGTCGCCGGATGATCATGTTTCCATCAAGAA
TAATCAGATTTATGATCCTCATTGCAATCTCAACGATGCTGACCATGTCA
ACGTAAGCCAATTTTTAACCTAAGAGTGATTAAAGCTATTATTCTTATTA
TATGTAAAAATTATGCTAATATCTTTTATAAAAAAAATGGATGGAAATAT
TGTAGACTGGTTTACAACTTCTGATTACTAATATTGGAAGTGATTTGGAT
GATGAATCTACAATAAGTGCTGGAGATAATAAACATGCTAAGAATCTTCA
GTTGCAAGAAGAGCTTAGACTTAAGAATGTAGAGAACCAAAGGCTGAAGG
AAAAGCTAAGCGATTTGCAA ATGCGTTATGTGTCCTTAATGCAACAGAAT
CAAAGAAATGAAGCCTCTGAAAGTGAG ACTGTGAATGGAAAAGCTGA
GGGAGGAGATGCTGTGATGGCTAGAAAGTTTGTGACTGGTTCTTCGTCAG
AAGTAGTTGATCCAAAAGTATTGAATTCTCCTATTTCGGATGAAAGAAAG
CGATCGAGATCGCCCCGGAACAACAATAAAACGGATCAGAAAGAGACTGA
TCCAGATTCAACCGATCAACTGGTACAAGTTTGGGAGCCAAATAAGGTTC
CAAGATTAAACCCCTCCAATGCTTCTGATCAAGCTGCTGCAGAAGCTACT
ATGAGAAAAGCGCGCGTCTCCGTCCGTGCCCGATCAGAAGCCCACATG ATCAACGATGGCTGCCAATGGCGAAAGT
ATGGACAGAAAATGGCGAAGGGAAACCCTTGTCCTCGAGCATATTACAGA
TGCACAATGGCTGTTGGTTGCCCCGTTCGCAAGCAA GTTCAGCGTTGTGCTGAAGACAA
AACAATTCTGATAACCACATATGAAGGGACACATAGTCATCCACTGCCAC
CCGCTGCTATGCCGATGGCGTCGACCACCGCGGCTGCTGCCACGGTGTTA
CTATCTGGATCAATGTCAAGTGCTGATGGGGTGGTGAACCCAAATTTACT
ATCTAGAATTCTTCCTAATTGCTCTTCTAGCATGGCCACACTCTCAGCAA
CAGCACCATTTCCTACTGTCACACTAGACCTTACACATGACAGCACAGAT
AACAATAATAACCAAAATTCTCATTCCCAATTTCAACTTGGACAGCCTCA
AAACTTTGGATCAGGACAATTACCACAGGTCATTGCACAAGCACTCTATA
ACCAATCCAAATTCTCTGGCCTTCAACTCTCTCAAGATGTTGGAGGCTCT
TCCCAATTGCACTCAACTCAACAAGCTTCATCACTCAGCGCTGCCATCAC
CGCCGATCCAAACTTCACCGCAGCAATCGCGGCCGCTATCTCCACCATAA
TTGGCGGTGGTTCTCCCAACAACAACAACAACAACAACAATCCTAATATC
CTCAACAGTGCTGCCTACAATCAGTAG TATTTTTTCACAAAACTAGAAAC
TCTTTGGTTCTATATTTGGATTTAGTTCTATTTTTCTAGCAATTATTTTT
TTATTTAAAAAAAGAAAGAAAGTGTGCAAAGCAAAATGAATTTGTGGATG
TTCATATTGCTTTCCTCACTAGGTTTTGGAATACAGCATTCCATTAGTTC
TTCAT back to top Coding sequence (CDS) from alignment at chr4LG4:6148680..6151084+
>Psat4g005720.1_Ps_Cameor_v1a ID=Psat4g005720.1_Ps_Cameor_v1a; Name=Psat4g005720.1; organism=Pisum sativum; type=CDS; length=2178bp; location=Sequence derived from: chr4LG4:6148680..6151084+ (Pisum sativum back to top
