Homology
BLAST of Psat4g008120.1 vs. DB:Swiss
Match:
RH58_ARATH (DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RH58 PE=2 SV=1)
HSP 1 Score: 607.446 bits (1565), Expect = 0.000e+0
Identity = 286/424 (67.45%), Postives = 352/424 (83.02%), Query Frame = 1
Query: 187 AIANPSPTIPTTDDSVTNPT----LRELCQSHVPHQLLQRMEEVGYVMPTEVQKEALPHLFSGRDCVLHAQTGSGKTLAYLLLIYSIVNTKKSSVQAVVLVPTRELGMQVTKVARILVAKPTGGEGEQRSGAIMALLDGGTLRRQKSWFKAEPPAIVVATVESMCLMLERHRFSLGTLRVMVVDEVDFIFNSSKQVSSLRKILTSYSSCNKRQTVFASASIPQHNRFLNEAVQQKWTKRDVIHIHVNAVEPMPSRLYHRFVVCDTERKLQTLLSLIQSDAPESGIIFVGEQSEKSKKTGNDPSTSLVIDFLKTSYHGSLNILLLEDDMNFNSRAASLLEVKKGGGYLLVATDVAARGVDFPEMTHIYNFDPPKTATDYLHRAGRTCRKPFSDVNCSVTSIIISEERFVLQRYENELRFVCEELI 1446
A+A S I + +SVT T LR++CQ VP +L RMEE+G+V PT++Q+EALP LF+GRDC+LHAQTGSGKTL YLLLI+S++N ++SSVQAV++VPTRELGMQVTKVAR+L AK E + + +MALLDGGTLRR KSW KAEPPAI+VATV S+C MLE+H F + ++RV+VVDEVDF+F SSKQV S+RK+LTS+SSC+KRQTVFASASIPQH F+++ +QQKWTKRDV+H+HV+A+ PMP L HRFV+C+ K Q LL+L++SDAPES IIFVGEQSEKSKK GNDPST+L+++FLKTSY GSL ILLLE DMNFNSRAASL E+++GGG+LLV+TD+AARG+D PE THI+NFD P+T TDYLHRAGR RKPFSD C V ++I SEERFVLQRYENEL F CEE++
Sbjct: 53 AVAETSSEIES--NSVTETTVPLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAK---SEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDRKCIVANLITSEERFVLQRYENELMFSCEEMM 471
BLAST of Psat4g008120.1 vs. DB:Swiss
Match:
RH58_ORYSJ (DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0970600 PE=2 SV=2)
HSP 1 Score: 569.696 bits (1467), Expect = 0.000e+0
Identity = 265/400 (66.25%), Postives = 331/400 (82.75%), Query Frame = 1
Query: 244 TLRELCQSHVPHQLLQRMEEVGYVMPTEVQKEALPHLFSGRDCVLHAQTGSGKTLAYLLLIYSIVNTKKSSVQAVVLVPTRELGMQVTKVARILVAKPTGGEGEQRSGAIMALLDGGTLRRQKSWFKAEPPAIVVATVESMCLMLERHRFSLGTLRVMVVDEVDFIFNSSKQVSSLRKILTSYSSCNKRQTVFASASIPQHNRFLNEAVQQKWTKRDVIHIHVNAVEPMPSRLYHRFVVCDTERKLQTLLSLIQSDAPESGIIFVGEQSEKSKKTGNDPSTSLVIDFLKTSYHGSLNILLLEDDMNFNSRAASLLEVKKGGGYLLVATDVAARGVDFPEMTHIYNFDPPKTATDYLHRAGRTCRKPFSDVNCSVTSIIISEERFVLQRYENELRFVCEEL 1443
TLRE+C VP +LQR EEVGYV+PTEVQ+++LP L SG+DC+LHAQTGSGKTLAYLL ++S ++ +SSVQA+V+VPTRELGMQVTKVARIL AK + +MALLDGG LRRQKSW KAEPPAI+VATV S+C M+E+ FSL ++RV+V+DEVDFIF SSKQVSSLRKILTSYS+ + RQT+FASASIPQHNRF+++ VQ KWTK DV+H+HVN V+PMPS L H++ +C + +L LLSL++ DAP+SGIIFV EQSEKSKK G+ PST++V++FL+T+Y GSL +LLLE+DMNFN+RA S EV KG G+LLV+TD+A+RG D P+ +HIYNFD PKTA DYLHRAGRT R+PFS + CSVT++I +E FVLQR++NEL+F CEEL
Sbjct: 39 TLREVCAGRVPEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLSVFSAIDFGRSSVQALVVVPTRELGMQVTKVARILAAK---------ACTVMALLDGGMLRRQKSWVKAEPPAIIVATVASLCQMIEKRAFSLQSMRVLVIDEVDFIFGSSKQVSSLRKILTSYSAASSRQTIFASASIPQHNRFVHDCVQHKWTKTDVVHVHVNPVQPMPSHLQHKYAICSKKERLHVLLSLLEKDAPKSGIIFVAEQSEKSKKAGHPPSTTVVVEFLRTTYMGSLEVLLLEEDMNFNARATSFTEV-KGKGFLLVSTDIASRGFDLPQTSHIYNFDLPKTAIDYLHRAGRTGREPFSKLACSVTTLITEDEHFVLQRFQNELKFHCEEL 428
BLAST of Psat4g008120.1 vs. DB:Swiss
Match:
CSHA_BACC1 (DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus cereus (strain ATCC 10987 / NRS 248) OX=222523 GN=cshA PE=3 SV=1)
HSP 1 Score: 154.066 bits (388), Expect = 7.245e-40
Identity = 115/366 (31.42%), Postives = 178/366 (48.63%), Query Frame = 1
Query: 244 TLRELCQSHVPHQLLQRMEEVGYVMPTEVQKEALPHLFSGRDCVLHAQTGSGKTLAYLLLIYSIVNTKKSSVQAVVLVPTRELGMQV-TKVARILVAKPTGGEGEQRSGAIMALLDGGTLRRQKSWFKAEPPAIVVATVESMCLMLERHRFSLGTLRVMVVDEVDFIFNSSKQVSSLRKILTSYSSCNKRQTVFASASIPQHNRFLNEAVQQKWTKRDVIHIHVNAVEPMPSRLYHRFVVCDTERKLQTLLSLIQSDAPESGIIFVGEQSEKSKKTGNDPSTSLVI-DFLKTSYHGSLNILLLEDDMNFNSRAASLLEVKKGGGYLLVATDVAARGVDFPEMTHIYNFDPPKTATDYLHRAGRTCR 1335
T REL S LLQ +E +G+ T +Q E +PH G+D + AQTG+GKT A+ L + V+T K SVQ +V+ PTREL +QV ++ +I G+ + I+ + G + RQ K P I+V T + + R L + +V+DE D + N + + ILT + QT+ SA++P R + E + HI V A E + ++ ++K L L+ +PE I+F ++K+ ++ S +L + + HG D+ R + L + K+G +LVATDVAARG+D +TH+YNFD P+ Y+HR GRT R
Sbjct: 3 TFRELGLSD---SLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKI---------GKHKRVRILPIYGGQDINRQIRALKKH-PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGF-IEDIEAILTDVPETH--QTLLFSATMPDPIRRIAERFMTEPQ-----HIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVF-----GRTKRRVDELSEALNLRGYAAEGIHG---------DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333
BLAST of Psat4g008120.1 vs. DB:Swiss
Match:
CSHA_BACCZ (DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus cereus (strain ZK / E33L) OX=288681 GN=cshA PE=3 SV=1)
HSP 1 Score: 154.066 bits (388), Expect = 7.705e-40
Identity = 115/366 (31.42%), Postives = 178/366 (48.63%), Query Frame = 1
Query: 244 TLRELCQSHVPHQLLQRMEEVGYVMPTEVQKEALPHLFSGRDCVLHAQTGSGKTLAYLLLIYSIVNTKKSSVQAVVLVPTRELGMQV-TKVARILVAKPTGGEGEQRSGAIMALLDGGTLRRQKSWFKAEPPAIVVATVESMCLMLERHRFSLGTLRVMVVDEVDFIFNSSKQVSSLRKILTSYSSCNKRQTVFASASIPQHNRFLNEAVQQKWTKRDVIHIHVNAVEPMPSRLYHRFVVCDTERKLQTLLSLIQSDAPESGIIFVGEQSEKSKKTGNDPSTSLVI-DFLKTSYHGSLNILLLEDDMNFNSRAASLLEVKKGGGYLLVATDVAARGVDFPEMTHIYNFDPPKTATDYLHRAGRTCR 1335
T REL S LLQ +E +G+ T +Q E +PH G+D + AQTG+GKT A+ L + V+T K SVQ +V+ PTREL +QV ++ +I G+ + I+ + G + RQ K P I+V T + + R L + +V+DE D + N + + ILT + QT+ SA++P R + E + HI V A E + ++ ++K L L+ +PE I+F ++K+ ++ S +L + + HG D+ R + L + K+G +LVATDVAARG+D +TH+YNFD P+ Y+HR GRT R
Sbjct: 3 TFRELGLSD---SLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKI---------GKHKRVRILPIYGGQDINRQIRALKKH-PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGF-IEDIEAILTDVPETH--QTLLFSATMPDPIRRIAERFMTEPQ-----HIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVF-----GRTKRRVDELSEALNLRGYAAEGIHG---------DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333
BLAST of Psat4g008120.1 vs. DB:Swiss
Match:
CSHA_BACCR (DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) OX=226900 GN=cshA PE=2 SV=2)
HSP 1 Score: 154.066 bits (388), Expect = 7.770e-40
Identity = 115/366 (31.42%), Postives = 178/366 (48.63%), Query Frame = 1
Query: 244 TLRELCQSHVPHQLLQRMEEVGYVMPTEVQKEALPHLFSGRDCVLHAQTGSGKTLAYLLLIYSIVNTKKSSVQAVVLVPTRELGMQV-TKVARILVAKPTGGEGEQRSGAIMALLDGGTLRRQKSWFKAEPPAIVVATVESMCLMLERHRFSLGTLRVMVVDEVDFIFNSSKQVSSLRKILTSYSSCNKRQTVFASASIPQHNRFLNEAVQQKWTKRDVIHIHVNAVEPMPSRLYHRFVVCDTERKLQTLLSLIQSDAPESGIIFVGEQSEKSKKTGNDPSTSLVI-DFLKTSYHGSLNILLLEDDMNFNSRAASLLEVKKGGGYLLVATDVAARGVDFPEMTHIYNFDPPKTATDYLHRAGRTCR 1335
T REL S LLQ +E +G+ T +Q E +PH G+D + AQTG+GKT A+ L + V+T K SVQ +V+ PTREL +QV ++ +I G+ + I+ + G + RQ K P I+V T + + R L + +V+DE D + N + + ILT + QT+ SA++P R + E + HI V A E + ++ ++K L L+ +PE I+F ++K+ ++ S +L + + HG D+ R + L + K+G +LVATDVAARG+D +TH+YNFD P+ Y+HR GRT R
Sbjct: 3 TFRELGLSD---SLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKI---------GKHKRVRILPIYGGQDINRQIRALKKH-PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGF-IEDIEAILTDVPETH--QTLLFSATMPDPIRRIAERFMTEPQ-----HIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVF-----GRTKRRVDELSEALNLRGYAAEGIHG---------DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333
BLAST of Psat4g008120.1 vs. DB:Swiss
Match:
CSHA_BACHK (DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) OX=281309 GN=cshA PE=3 SV=1)
HSP 1 Score: 154.066 bits (388), Expect = 7.938e-40
Identity = 115/366 (31.42%), Postives = 178/366 (48.63%), Query Frame = 1
Query: 244 TLRELCQSHVPHQLLQRMEEVGYVMPTEVQKEALPHLFSGRDCVLHAQTGSGKTLAYLLLIYSIVNTKKSSVQAVVLVPTRELGMQV-TKVARILVAKPTGGEGEQRSGAIMALLDGGTLRRQKSWFKAEPPAIVVATVESMCLMLERHRFSLGTLRVMVVDEVDFIFNSSKQVSSLRKILTSYSSCNKRQTVFASASIPQHNRFLNEAVQQKWTKRDVIHIHVNAVEPMPSRLYHRFVVCDTERKLQTLLSLIQSDAPESGIIFVGEQSEKSKKTGNDPSTSLVI-DFLKTSYHGSLNILLLEDDMNFNSRAASLLEVKKGGGYLLVATDVAARGVDFPEMTHIYNFDPPKTATDYLHRAGRTCR 1335
T REL S LLQ +E +G+ T +Q E +PH G+D + AQTG+GKT A+ L + V+T K SVQ +V+ PTREL +QV ++ +I G+ + I+ + G + RQ K P I+V T + + R L + +V+DE D + N + + ILT + QT+ SA++P R + E + HI V A E + ++ ++K L L+ +PE I+F ++K+ ++ S +L + + HG D+ R + L + K+G +LVATDVAARG+D +TH+YNFD P+ Y+HR GRT R
Sbjct: 3 TFRELGLSD---SLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKI---------GKHKRVRILPIYGGQDINRQIRALKKH-PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGF-IEDIEAILTDVPETH--QTLLFSATMPDPIRRIAERFMTEPQ-----HIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVF-----GRTKRRVDELSEALNLRGYAAEGIHG---------DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333
BLAST of Psat4g008120.1 vs. DB:Swiss
Match:
CSHA_BACAN (DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus anthracis OX=1392 GN=cshA PE=3 SV=1)
HSP 1 Score: 154.066 bits (388), Expect = 7.938e-40
Identity = 115/366 (31.42%), Postives = 178/366 (48.63%), Query Frame = 1
Query: 244 TLRELCQSHVPHQLLQRMEEVGYVMPTEVQKEALPHLFSGRDCVLHAQTGSGKTLAYLLLIYSIVNTKKSSVQAVVLVPTRELGMQV-TKVARILVAKPTGGEGEQRSGAIMALLDGGTLRRQKSWFKAEPPAIVVATVESMCLMLERHRFSLGTLRVMVVDEVDFIFNSSKQVSSLRKILTSYSSCNKRQTVFASASIPQHNRFLNEAVQQKWTKRDVIHIHVNAVEPMPSRLYHRFVVCDTERKLQTLLSLIQSDAPESGIIFVGEQSEKSKKTGNDPSTSLVI-DFLKTSYHGSLNILLLEDDMNFNSRAASLLEVKKGGGYLLVATDVAARGVDFPEMTHIYNFDPPKTATDYLHRAGRTCR 1335
T REL S LLQ +E +G+ T +Q E +PH G+D + AQTG+GKT A+ L + V+T K SVQ +V+ PTREL +QV ++ +I G+ + I+ + G + RQ K P I+V T + + R L + +V+DE D + N + + ILT + QT+ SA++P R + E + HI V A E + ++ ++K L L+ +PE I+F ++K+ ++ S +L + + HG D+ R + L + K+G +LVATDVAARG+D +TH+YNFD P+ Y+HR GRT R
Sbjct: 3 TFRELGLSD---SLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKI---------GKHKRVRILPIYGGQDINRQIRALKKH-PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGF-IEDIEAILTDVPETH--QTLLFSATMPDPIRRIAERFMTEPQ-----HIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVF-----GRTKRRVDELSEALNLRGYAAEGIHG---------DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333
BLAST of Psat4g008120.1 vs. DB:Swiss
Match:
CSHA_BACAH (DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus thuringiensis (strain Al Hakam) OX=412694 GN=cshA PE=3 SV=1)
HSP 1 Score: 154.066 bits (388), Expect = 7.938e-40
Identity = 115/366 (31.42%), Postives = 178/366 (48.63%), Query Frame = 1
Query: 244 TLRELCQSHVPHQLLQRMEEVGYVMPTEVQKEALPHLFSGRDCVLHAQTGSGKTLAYLLLIYSIVNTKKSSVQAVVLVPTRELGMQV-TKVARILVAKPTGGEGEQRSGAIMALLDGGTLRRQKSWFKAEPPAIVVATVESMCLMLERHRFSLGTLRVMVVDEVDFIFNSSKQVSSLRKILTSYSSCNKRQTVFASASIPQHNRFLNEAVQQKWTKRDVIHIHVNAVEPMPSRLYHRFVVCDTERKLQTLLSLIQSDAPESGIIFVGEQSEKSKKTGNDPSTSLVI-DFLKTSYHGSLNILLLEDDMNFNSRAASLLEVKKGGGYLLVATDVAARGVDFPEMTHIYNFDPPKTATDYLHRAGRTCR 1335
T REL S LLQ +E +G+ T +Q E +PH G+D + AQTG+GKT A+ L + V+T K SVQ +V+ PTREL +QV ++ +I G+ + I+ + G + RQ K P I+V T + + R L + +V+DE D + N + + ILT + QT+ SA++P R + E + HI V A E + ++ ++K L L+ +PE I+F ++K+ ++ S +L + + HG D+ R + L + K+G +LVATDVAARG+D +TH+YNFD P+ Y+HR GRT R
Sbjct: 3 TFRELGLSD---SLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKI---------GKHKRVRILPIYGGQDINRQIRALKKH-PHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGF-IEDIEAILTDVPETH--QTLLFSATMPDPIRRIAERFMTEPQ-----HIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVF-----GRTKRRVDELSEALNLRGYAAEGIHG---------DLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGR 333
BLAST of Psat4g008120.1 vs. DB:Swiss
Match:
RHPA_HELP8 (DEAD-box ATP-dependent RNA helicase RhpA OS=Helicobacter pylori (strain B128) OX=544406 GN=rhpA PE=1 SV=1)
HSP 1 Score: 145.976 bits (367), Expect = 3.963e-37
Identity = 104/382 (27.23%), Postives = 193/382 (50.52%), Query Frame = 1
Query: 205 PTIPTT--DDSVTNPTLRELCQSHVPHQLLQRMEEVGYVMPTEVQKEALPHLFSGRDCVLHAQTGSGKTLAYLLLIYSIVNTKKS--SVQAVVLVPTRELGMQVTKVARILVAKPTGGEGEQRSGAIMALLDGGTLRRQKSWFKAEPPAIVVATVESMCLMLERHRFSLGTLRVMVVDEVDFIFNSSKQVSSLRKILTSYSSCNKRQTVFASASIPQHNRFLNEAVQQKWTKRDVIHIHVNAVEPMPSRLYHRFVVCDTERKLQTLLSLIQSDAPESGIIFVGEQSEKSKKTGNDPSTSLV-IDFLKTSYHGSLNILLLEDDMNFNSRAASLLEVKKGGGYLLVATDVAARGVDFPEMTHIYNFDPPKTATDYLHRAGRTCR 1335
P +PT DD+ P+ +L + +L+ + E G+ P+ +Q++A+P + GRD + AQTG+GKT A+ L I+N K+ +++A+V+ PTREL MQ++ L G+ + + G ++++Q + K P +++AT + L+ R +V+V+DE D + + + + +I S + Q + SA++P+ + L + + + + I IH+ + + RF V + + + ++ L+ + AP+ I+F ++KK ++ L ++ T+ HG DM+ R AS++ KK +LVATDVA+RG+D ++H++N+ P Y+HR GRT R
Sbjct: 6 PPLPTEIDDDAYHKPSFNDLG---LKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFAL---PIINNLKNNHTIEALVITPTRELAMQISDEIFKL--------GKHTRTKTVCVYGGQSVKKQCEFIKKNP-QVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGF-LDDIEEIFDYLPS--EAQILLFSATMPEPIKRLADKILE-----NPIKIHIAPSNITNTDITQRFYVINEHERAEAIMRLLDTQAPKKSIVFT-----RTKKEADELHQFLASKNYKSTALHG---------DMDQRDRRASIMAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGR 350
BLAST of Psat4g008120.1 vs. DB:Swiss
Match:
CRHR_SYNY3 (RNA helicase CrhR OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=crhR PE=1 SV=1)
HSP 1 Score: 142.124 bits (357), Expect = 9.733e-36
Identity = 117/393 (29.77%), Postives = 193/393 (49.11%), Query Frame = 1
Query: 289 QRMEEVGYVMPTEVQKEALPHLFSGRDCVLHAQTGSGKTLAYLLLIYSIVNTKKSSVQAVVLVPTRELGMQVTKVARILVAKPTGGEGEQRSGAIMALLDGGTLRRQKSWFKAEPPAIVVATVESMCLMLERHRFSLGTLRVMVVDEVDFIFNSSKQVSSLRKILTSYSSCNKRQTVFASASIPQH-----NRFLNEAVQQKWTKRDVIHIHVNAVEPMPSR----LYHRFVVCDTERKLQTLLSLIQSDAPESGIIFVGEQSEKSKKTGNDPSTSL-----VIDFLKTSYHGSLNILLLEDDMNFNSRAASLLEVKKGGGYLLVATDVAARGVDFPEMTHIYNFDPPKTATDYLHRAGRTCRKPFSDVNCSVTSIIISEERFVLQRYENELR 1425
Q + ++G+ PT++Q EA+P L SGRD + +QTG+GKT A+ L + ++ + +QA++L PTREL QV + + +R I+ + G ++ RQ + IVV T + +++R + L T++ +V+DE D + S + ++ IL RQT SA++P+ N+FLN D + V + P+R LYH V K + L +++ + PES IIFV ++K+T D ++ L +D YHG+L+ + R + + G L+VATD+AARG+D ++H+ NFD P A Y+HR GRT R + ++ I +R +L+ EN L+
Sbjct: 20 QLLADIGFEAPTQIQTEAIPLLLSGRDMLAQSQTGTGKTAAFALPLMDRIDPE-GDLQALILTPTRELAQQVAEAMKDF--------SHERRLFILNVYGGQSIERQIRSLE-RGVQIVVGTPGRVIDLIDRKKLKLETIQWVVLDEADEML-SMGFIDDVKTILRKTPPT--RQTACFSATMPREIKELVNQFLN----------DPALVTVKQTQSTPTRIEQQLYH---VPRGWSKAKALQPILEMEDPESAIIFV-----RTKQTAADLTSRLQEAGHSVD----EYHGNLS---------QSQRERLVHRFRDGKIKLVVATDIAARGLDVNNLSHVVNFDLPDNAETYIHRIGRTGRAGKTGKAIALVEPI---DRRLLRSIENRLK 365
The following BLAST results are available for this feature:
BLAST of Psat4g008120.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (
BLAST: P. sativum Cameor genome v1a vs. Swissprot )
Total hits: 10
2000 4000 6000 8000 10000 12000 Expect = 0.00e+0 / Id = 67.45 Expect = 0.00e+0 / Id = 66.25 Expect = 7.25e-40 / Id = 31.42 Expect = 7.70e-40 / Id = 31.42 Expect = 7.77e-40 / Id = 31.42 Expect = 7.94e-40 / Id = 31.42 Expect = 7.94e-40 / Id = 31.42 Expect = 7.94e-40 / Id = 31.42 Expect = 3.96e-37 / Id = 27.23 Expect = 9.73e-36 / Id = 29.77 Sequence RH58_ARATH RH58_ORYSJ CSHA_BACC1 CSHA_BACCZ CSHA_BACCR CSHA_BACHK CSHA_BACAN CSHA_BACAH RHPA_HELP8 CRHR_SYNY3
Match Name E-value Identity Description
RH58_ARATH 0.000e+0 67.45 DEAD-box ATP-dependent RNA helicase 58, chloroplas... [more] RH58_ORYSJ 0.000e+0 66.25 DEAD-box ATP-dependent RNA helicase 58, chloroplas... [more] CSHA_BACC1 7.245e-40 31.42 DEAD-box ATP-dependent RNA helicase CshA OS=Bacill... [more] CSHA_BACCZ 7.705e-40 31.42 DEAD-box ATP-dependent RNA helicase CshA OS=Bacill... [more] CSHA_BACCR 7.770e-40 31.42 DEAD-box ATP-dependent RNA helicase CshA OS=Bacill... [more] CSHA_BACHK 7.938e-40 31.42 DEAD-box ATP-dependent RNA helicase CshA OS=Bacill... [more] CSHA_BACAN 7.938e-40 31.42 DEAD-box ATP-dependent RNA helicase CshA OS=Bacill... [more] CSHA_BACAH 7.938e-40 31.42 DEAD-box ATP-dependent RNA helicase CshA OS=Bacill... [more] RHPA_HELP8 3.963e-37 27.23 DEAD-box ATP-dependent RNA helicase RhpA OS=Helico... [more] CRHR_SYNY3 9.733e-36 29.77 RNA helicase CrhR OS=Synechocystis sp. (strain PCC... [more]
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Sequences
The
following sequences are available for this feature:
mRNA sequence
>Psat4g008120.1_Ps_Cameor_v1a ID=Psat4g008120.1_Ps_Cameor_v1a; Name=Psat4g008120.1; organism=Pisum sativum; type=mRNA; length=13341bp back to top protein sequence of Psat4g008120.1_Ps_Cameor_v1a
>Psat4g008120.1_Ps_Cameor_v1a ID=Psat4g008120.1_Ps_Cameor_v1a; Name=Psat4g008120.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=484bp back to top mRNA from alignment at chr4LG4:9937100..9950440-
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat4g008120.1_Ps_Cameor_v1a ID=Psat4g008120.1_Ps_Cameor_v1a; Name=Psat4g008120.1; organism=Pisum sativum; type=mRNA; length=13341bp; location=Sequence derived from: chr4LG4:9937100..9950440- (Pisum sativumATGGACATTCACACTCTCTCACTCTCACGTCTTCTTCCTCTTCGCGTTCT
TTCATTCCAAAACCCTAATTCTTCTTCTTCTTCCTCCTCCTCTCGCATCC
CTCGTTCACACAACAACTACCATTTCCTGAAATTATCCTCCCCAACTCAC
ATTAACCGTGTCTCCATCTTCACCACAACGCCACTAGCCATTGCAAATCC
TTCTCCCACCATCCCTACCACAGATGATTCAGTAACCAATCCCACTCTCA
GAGAATTATGTCAATCTCATGTACCTCACCAATTACTGCAAAG AATGGAAGAGGTTGGATATGTCATGCC
TACGGAGGTACAGAAGGAAGCATTGCCTCATCTTTTTTCTGGCCGTGACT
GCGTACTTCATGCTCAG A
CAGGTTCTGGGAAGACACTAGCATACTTGCTTTTGATATATTCCATCGTC
AACACTAAAAAGTCTTCCGTGCAAGCAGTAGTTTTGGTGCCCACCCGGGA
GCTTGGTATGCAA GTTACCAAAGTTGC
TAGGATACTGGTGGCAAAGCCAACCGGAGGTGAAGGGGAGCAGAGATCAG
GTGCCATCATGGCTCTGTTAGATGGAGGAACATTAAGAAGGCAGAAGAGT
TGGTTTAAG GCAGAGCCTCCAGCAATAGTAGTTGCAACAGTTGAGAGTATG
TGTCTAATGCTGGAAAGACACCGTTTTTCGCTTGGAACCTTGCGGGTGAT
GGTTGTTGATGAG GTTGACTTCATTTTCAATTCTTCAAAGCAAGTGAGTTCTCTCCGGAA
GATTTTGACCTCGTATTCATCCTGCAATAAACGTCAAACAGTGTTTGCCA
GTGCATCTATACCACAGCACAATCGATTTCTTAACGAAGCTGTGCAGCAG
AAATGGACTAAG AGGGATGTGA
TCCATATTCACGTTAATGCAGTGGAGCCAATGCCATCTCGCCTATATCAC
AGATTTGTA GTATGTGATACAGAGAG
AAAACTACAAACCCTGTTATCCTTGATTCAATCTGATGCTCCTGAGTCTG
GTATTATATTTGTTGGTGAGCAG TCTGAGAAGTCGAAAAAGACTGGAAATGATCCA
TCCACATCCCTTGTGATTGACTTTCTAAAGACATCATATCATGGTTCTTT
AAATATCCTCCTTCTCGAAGATGACATGAATTTCAATTCAAGAGCAGCTT
CTCTGTTG GAGGTTAAGAAAGGTGGCGGCTA
TCTTCTAGTGGCAACAGATGTAGCTGCTAGAGGAGTTGACTTTCCAGAAA
TGACTCACATATACAACTTTGATCCGCCCAAAACTGCCACTGATTATCTT
CATCGAGCAGGGAGGACTTGTAGAAAACCCTTTTCTGATGTCAACTGTTC
TGTCACAAGCATTATAATCTCTGAGGAGCGGTTTGTTCTGCAGAGATATG
AAAATGAGTTGAGGTTTGTTTGTGAAGAGCTTATTCCATAA back to top Coding sequence (CDS) from alignment at chr4LG4:9937100..9950440-
>Psat4g008120.1_Ps_Cameor_v1a ID=Psat4g008120.1_Ps_Cameor_v1a; Name=Psat4g008120.1; organism=Pisum sativum; type=CDS; length=2904bp; location=Sequence derived from: chr4LG4:9937100..9950440- (Pisum sativum back to top
