Psat5g022640.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Psat5g022640.1 vs. DB:Swiss
Match: YIPF5_XENTR (Protein YIPF5 OS=Xenopus tropicalis OX=8364 GN=yipf5 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.563e-37 Identity = 78/222 (35.14%), Postives = 124/222 (55.86%), Query Frame = 1 Query: 40 PTSTNQHRPTAP--FQPRPTANPIPFMSFEIGSATTSSFPPAPNNFSFDQEPPLLEELGINTKQIWNKTTSLLNPLRVKNLDLHEDADLSGPVMLIMAFGLFQLLAGKIHFGIILGWVTVSALFLYVVSNMLAGRNGNLDLYRCV-SLIGYCMLPMVILSAISLFLPQGGLYISVIAMFFVAWSTKACTMLLVHVAGWDQHPGLLAYVCFLIYSLFSLLVVF 696 P NQ +P +QP T P +AT S + +FD EPPLLEELGIN IW KT ++L+PL+V + ++ + DL+GP++ +AFG LLAGKI FG + G + L +Y + N+++ + + CV S++GYC+LPM+ILS+ ++ G+ V+A + W + + + + + D L+AY C L+Y +F+L+ VF Sbjct: 52 PEMMNQQQPYTGQIYQPTQTYTP---------AATDSVYGS-----TFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGNIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMYCLLNLMSMTGVS---FGCVSSVLGYCLLPMIILSSFAVIFSLQGILGIVLAALIIGWCSFSASKIFISALAMDGQQVLVAYPCALLYGVFALISVF 256
BLAST of Psat5g022640.1 vs. DB:Swiss
Match: YIPF7_MOUSE (Protein YIPF7 OS=Mus musculus OX=10090 GN=Yipf7 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.654e-37 Identity = 73/220 (33.18%), Postives = 123/220 (55.91%), Query Frame = 1 Query: 58 HRPTAPFQPRPTANPIPFMSFEIG------SATTSSFPPAPNNFSFDQEPPLLEELGINTKQIWNKTTSLLNPLRVKNLDLHEDADLSGPVMLIMAFGLFQLLAGKIHFGIILGWVTVSALFLYVVSNMLAGRNGNLDLYRCV-SLIGYCMLPMVILSAISLFLPQGGLYISVIAMFFVAWSTKACTMLLVHVAGWDQHPGLLAYVCFLIYSLFSLLVVF 696 P A QP A P F+ + G ++ + +P+ +FD+EPPLLEELGIN IW KT ++LNP++ + + + DL+GP++ +A G L+AGK FG + G + L ++ + N+++ + Y CV S++GYC+LPMV+LS+ ++F G ++ A+ + W + + + + + + L+AY C L+Y LF+LL VF Sbjct: 38 REPQATEQPSSPAPPEMFLPSDYGGQLFQPASNLDYYSQSPSVDTFDEEPPLLEELGINFDHIWQKTLTVLNPMKPADGSIMNETDLTGPILFCVALGATLLMAGKAQFGYVYGMSAIGCLGIHALLNLMSNSGVS---YGCVASVLGYCLLPMVLLSSCAVFFSLQGTIGTMSALLIITWCSLSASKIFISALAMEGQQLLVAYPCALLYGLFALLTVF 254
BLAST of Psat5g022640.1 vs. DB:Swiss
Match: YIPF5_XENLA (Protein YIPF5 OS=Xenopus laevis OX=8355 GN=yipf5 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.380e-35 Identity = 77/224 (34.38%), Postives = 121/224 (54.02%), Query Frame = 1 Query: 34 IFPTSTNQHRPTAP--FQPRPTANPIPFMSFEIGSATTSSFPPAPNNFSFDQEPPLLEELGINTKQIWNKTTSLLNPLRVKNLDLHEDADLSGPVMLIMAFGLFQLLAGKIHFGIILGWVTVSALFLYVVSNMLAGRNGNLDLYRCV-SLIGYCMLPMVILSAISLFLPQGGLYISVIAMFFVAWSTKACTMLLVHVAGWDQHPGLLAYVCFLIYSLFSLLVVF 696 I Q +P +QP T P +AT S + +FD EPPLLEELGIN IW KT ++L+PL+V + + + DL+GP++ +AFG LLAGKI FG + G + L +Y + N+++ + + CV S++GYC+LPM+ILS ++ G+ V+A + W + + + + + D L+AY C L+Y +F+L+ VF Sbjct: 50 ILQEMNQQQQPYTGQIYQPTQTYTP---------TATESVYGS-----TFDDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAMGCLGMYCLLNLMSMTGVS---FGCVSSVLGYCLLPMIILSTFAVIFSLQGILGIVLAALIIGWCSFSASKIFISALAMDGQQLLVAYPCALLYGVFALISVF 256
BLAST of Psat5g022640.1 vs. DB:Swiss
Match: YIPF7_HUMAN (Protein YIPF7 OS=Homo sapiens OX=9606 GN=YIPF7 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 3.716e-35 Identity = 73/223 (32.74%), Postives = 123/223 (55.16%), Query Frame = 1 Query: 58 HRPTAPFQPRPTANPIPFMSFEIGSATTSSFPPAPNNF---------SFDQEPPLLEELGINTKQIWNKTTSLLNPLRVKNLDLHEDADLSGPVMLIMAFGLFQLLAGKIHFGIILGWVTVSALFLYVVSNMLAGRNGNLDLYRCV-SLIGYCMLPMVILSAISLFLPQGGLYISVIAMFFVAWSTKACTMLLVHVAGWDQHPGLLAYVCFLIYSLFSLLVVF 696 + A QP+P A+ +P F PA N+ SFD+EPPLLEELGI+ IW KT ++LNP++ + + + DL+GP++ +A G LLAGK+ FG + G + L ++ + N+++ + Y CV S++GYC+LPMVILS ++F G++ + ++ + W + + + + + + L+AY C ++Y LF+LL +F Sbjct: 62 RKQQAGEQPQP-ASFVPSEMLMSSGYAGQFFQPASNSDYYSQSPYIDSFDEEPPLLEELGIHFDHIWQKTLTVLNPMKPVDGSIMNETDLTGPILFCVALGATLLLAGKVQFGYVYGMSAIGCLVIHALLNLMSSSGVS---YGCVASVLGYCLLPMVILSGCAMFFSLQGIFGIMSSLVIIGWCSLSASKIFIAALHMEGQQLLVAYPCAILYGLFALLTIF 280
BLAST of Psat5g022640.1 vs. DB:Swiss
Match: YIPF5_MACFA (Protein YIPF5 OS=Macaca fascicularis OX=9541 GN=YIPF5 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.154e-33 Identity = 70/217 (32.26%), Postives = 120/217 (55.30%), Query Frame = 1 Query: 58 HRPTAPFQPRPTANPIPFMSFEIGSATTSSFPPAPNNF---SFDQEPPLLEELGINTKQIWNKTTSLLNPLRVKNLDLHEDADLSGPVMLIMAFGLFQLLAGKIHFGIILGWVTVSALFLYVVSNMLAGRNGNLDLYRCV-SLIGYCMLPMVILSAISLFLPQGGLYISVIAMFFVAWSTKACTMLLVHVAGWDQHPGLLAYVCFLIYSLFSLLVVF 696 + F P P + +I T + P +P F SF+ EPPLLEELGIN IW KT ++L+PL+V + + + DL+GP++ +AFG LLAGKI FG + G + L ++ + N+++ + + CV S++GYC+LPM++LS+ ++ G+ ++ + W + + + + + + L+AY C L+Y +F+L+ VF Sbjct: 44 YSQQGRFVPPDMMQPQQPYTGQIYQPTQAYTPASPQPFYGNSFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVS---FGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF 257
BLAST of Psat5g022640.1 vs. DB:Swiss
Match: YIPF5_PONAB (Protein YIPF5 OS=Pongo abelii OX=9601 GN=YIPF5 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 7.632e-33 Identity = 74/230 (32.17%), Postives = 125/230 (54.35%), Query Frame = 1 Query: 22 VPPVIF----PTSTNQHRPTAPFQPRPTANPIPFMSFEIGSATTSSFPPAPNNFSFDQEPPLLEELGINTKQIWNKTTSLLNPLRVKNLDLHEDADLSGPVMLIMAFGLFQLLAGKIHFGIILGWVTVSALFLYVVSNMLAGRNGNLDLYRCV-SLIGYCMLPMVILSAISLFLPQGGLYISVIAMFFVAWSTKACTMLLVHVAGWDQHPGLLAYVCFLIYSLFSLLVVF 696 VPP + P + ++PT + P A+P PF NNF + EPPLLEELGIN IW KT ++L+PL+V + + + DL+GP++ +AFG LLAGKI FG + G + L ++ + N+++ + + CV S++GYC+LPM++LS+ ++ G+ ++ + W + + + + + + L+AY C L+Y +F+L+ VF Sbjct: 51 VPPDMMQPQQPYTGQIYQPTQAYTP---ASPQPFYG---------------NNF--EDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVS---FGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF 257
BLAST of Psat5g022640.1 vs. DB:Swiss
Match: YIPF5_HUMAN (Protein YIPF5 OS=Homo sapiens OX=9606 GN=YIPF5 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 7.632e-33 Identity = 74/230 (32.17%), Postives = 125/230 (54.35%), Query Frame = 1 Query: 22 VPPVIF----PTSTNQHRPTAPFQPRPTANPIPFMSFEIGSATTSSFPPAPNNFSFDQEPPLLEELGINTKQIWNKTTSLLNPLRVKNLDLHEDADLSGPVMLIMAFGLFQLLAGKIHFGIILGWVTVSALFLYVVSNMLAGRNGNLDLYRCV-SLIGYCMLPMVILSAISLFLPQGGLYISVIAMFFVAWSTKACTMLLVHVAGWDQHPGLLAYVCFLIYSLFSLLVVF 696 VPP + P + ++PT + P A+P PF NNF + EPPLLEELGIN IW KT ++L+PL+V + + + DL+GP++ +AFG LLAGKI FG + G + L ++ + N+++ + + CV S++GYC+LPM++LS+ ++ G+ ++ + W + + + + + + L+AY C L+Y +F+L+ VF Sbjct: 51 VPPDMMQPQQPYTGQIYQPTQAYTP---ASPQPFYG---------------NNF--EDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVS---FGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF 257
BLAST of Psat5g022640.1 vs. DB:Swiss
Match: YIPF5_DICDI (Protein YIPF5 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf5 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.891e-33 Identity = 67/175 (38.29%), Postives = 106/175 (60.57%), Query Frame = 1 Query: 172 SFDQEPPLLEELGINTKQIWNKTTSLLNPLRVKNLDLHEDADLSGPVMLIMAFGLFQLLAGKIHFGIILGWVTVSALFLYVVSNMLAGRNGNLDLYRCVSLIGYCMLPMVILSAISLFLPQGGLYISVIAMFFVAWSTKACTMLLVHVAGWDQHPGLLAYVCFLIYSLFSLLVVF 696 SFD E PLLEELGIN I +KT S+LNPL+ + + +D DL GP++ + G L++GKI FG I G + + +Y+V N+++ + +D+YR +S++GYC+LPM+ LS SL + G+ ++ F + WST + + + V V L+AY L+Y+ F+L+ F Sbjct: 40 SFDNELPLLEELGINFDHIRSKTLSVLNPLKKIDSHIMDDTDLGGPILFGLLLGFSLLMSGKIQFGYIYGLGLIGCVSMYIVLNLMSEK--GIDIYRVISVLGYCLLPMIFLSFTSLIININGMVGYILIGFAIVWSTYSASKMFVKVLSMIDQRILVAYPVGLLYTGFALITAF 212
BLAST of Psat5g022640.1 vs. DB:Swiss
Match: YIPF5_DANRE (Protein YIPF5 OS=Danio rerio OX=7955 GN=yipf5 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.357e-32 Identity = 62/175 (35.43%), Postives = 103/175 (58.86%), Query Frame = 1 Query: 175 FDQEPPLLEELGINTKQIWNKTTSLLNPLRVKNLDLHEDADLSGPVMLIMAFGLFQLLAGKIHFGIILGWVTVSALFLYVVSNMLAGRNGNLDLYRCV-SLIGYCMLPMVILSAISLFLPQGGLYISVIAMFFVAWSTKACTMLLVHVAGWDQHPGLLAYVCFLIYSLFSLLVVF 696 F+ EPPLLEELGIN IW KT ++L+PL+ + + + DL+GP++ +AFG LL GKI FG + G + L +Y + N+++ + + CV S++GYC+LPM+ILS+ + G+ ++ + W + + + + + D L+AY C L+Y +F+L+ VF Sbjct: 86 FEDEPPLLEELGINFDHIWQKTLTVLHPLKASDGSIMNETDLAGPMVFCLAFGATLLLTGKIQFGYVYGISAIGCLGMYCLLNLMSMTGVS---FGCVASVLGYCLLPMIILSSFGVIFSLQGIMGIILTAAIIGWCSLSASKIFISALAMDGQQLLVAYPCALLYGVFALISVF 257
BLAST of Psat5g022640.1 vs. DB:Swiss
Match: YIPF5_BOVIN (Protein YIPF5 OS=Bos taurus OX=9913 GN=YIPF5 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.776e-31 Identity = 61/176 (34.66%), Postives = 107/176 (60.80%), Query Frame = 1 Query: 172 SFDQEPPLLEELGINTKQIWNKTTSLLNPLRVKNLDLHEDADLSGPVMLIMAFGLFQLLAGKIHFGIILGWVTVSALFLYVVSNMLAGRNGNLDLYRCV-SLIGYCMLPMVILSAISLFLPQGGLYISVIAMFFVAWSTKACTMLLVHVAGWDQHPGLLAYVCFLIYSLFSLLVVF 696 +F+ EPPLLEELGIN IW KT ++L+PL+V + + + DL+GP++ +AFG LLAGKI FG + G + L ++ + N+++ + + CV S++GYC+LPM++LS+ ++ G+ ++ + W + + + + + + L+AY C L+Y +F+L+ VF Sbjct: 85 NFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLMSMTGVS---FGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF 257 The following BLAST results are available for this feature:
BLAST of Psat5g022640.1 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Psat5g022640.1_Ps_Cameor_v1a ID=Psat5g022640.1_Ps_Cameor_v1a; Name=Psat5g022640.1; organism=Pisum sativum; type=mRNA; length=1234bpback to top protein sequence of Psat5g022640.1_Ps_Cameor_v1a >Psat5g022640.1_Ps_Cameor_v1a ID=Psat5g022640.1_Ps_Cameor_v1a; Name=Psat5g022640.1_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=233bpback to top mRNA from alignment at chr5LG3:42964161..42965394+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Psat5g022640.1_Ps_Cameor_v1a ID=Psat5g022640.1_Ps_Cameor_v1a; Name=Psat5g022640.1; organism=Pisum sativum; type=mRNA; length=1234bp; location=Sequence derived from: chr5LG3:42964161..42965394+ (Pisum sativumback to top Coding sequence (CDS) from alignment at chr5LG3:42964161..42965394+ >Psat5g022640.1_Ps_Cameor_v1a ID=Psat5g022640.1_Ps_Cameor_v1a; Name=Psat5g022640.1; organism=Pisum sativum; type=CDS; length=1398bp; location=Sequence derived from: chr5LG3:42964161..42965394+ (Pisum sativumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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