Psat6g005760.5

Transcript Overview
NamePsat6g005760.5
Unique NamePsat6g005760.5_Ps_Cameor_v1a
TypemRNA
OrganismPisum sativum (pea)
Sequence length4060
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr6LG2supercontigchr6LG2:3997581..4001640 +Pisum sativum Cameor genome v1an/a
chr6LG2supercontigchr6LG2:3997581..4001640 +Pisum sativum Cameor genome v1an/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan: P. sativum Cameor genome v1a2019-09-12
BLAST: P. sativum Cameor genome v1a vs. Swissprot2019-09-12
Pisum sativum Cameor genome v1a2019-09-06
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
capsL340Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
psvuR622Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuR651Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pspvR580Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvR700Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpsL0304Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpsL0351Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspsL232Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspsL764Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pszwsR594Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pstifR649Vicia faba cv. Tiffany genome v1.0Vicia faba
psvfhR634Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
psvrvR508Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvrvR512Vigna radiata cv. VC1973A genome v6.0Vigna radiata
psvuaR592Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
psvuaR599Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
psvssR715Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpsL343Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpsL597Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpsL764Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpsL320Cicer arietinum
ccapsL546Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapsL663Cajanus cajan cv. Asha genome v2.0Cajanus cajan
psvumR664Vigna umbellata FF25 genome v1.0Vigna umbellata
psvumR692Vigna umbellata FF25 genome v1.0Vigna umbellata
psvvaR756Vicia villosa cv. AU Merit genome v1.0Vicia villosa
psvasR583Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvasR599Vigna angularis cv. Shumari genome v1.a1Vigna angularis
psvstR592Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
psvstR619Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pspvfR606Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
psvunR596Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
psvunR623Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pspvfR737Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Psat6g005760Psat6g005760_Ps_Cameor_v1aPisum sativumgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Psat6g005760.5Psat6g005760.5_Ps_Cameor_v1a-proteinPisum sativumpolypeptide
Psat6g005760.5_Ps_Cameor_v1aPsat6g005760.5_Ps_Cameor_v1aPisum sativumpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat6g005760.5.exon1Psat6g005760.5.exon1_Ps_Cameor_v1aPisum sativumexon
Psat6g005760.5.exon2Psat6g005760.5.exon2_Ps_Cameor_v1aPisum sativumexon
Psat6g005760.5.exon3Psat6g005760.5.exon3_Ps_Cameor_v1aPisum sativumexon
Psat6g005760.5.exon4Psat6g005760.5.exon4_Ps_Cameor_v1aPisum sativumexon
Psat6g005760.5.exon5Psat6g005760.5.exon5_Ps_Cameor_v1aPisum sativumexon
Psat6g005760.5.exon6Psat6g005760.5.exon6_Ps_Cameor_v1aPisum sativumexon
Psat6g005760.5.exon7Psat6g005760.5.exon7_Ps_Cameor_v1aPisum sativumexon
Psat6g005760.5.exon8Psat6g005760.5.exon8_Ps_Cameor_v1aPisum sativumexon
Psat6g005760.5.exon9Psat6g005760.5.exon9_Ps_Cameor_v1aPisum sativumexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat6g005760.5.five_prime_utr1Psat6g005760.5.five_prime_utr1_Ps_Cameor_v1aPisum sativumfive_prime_UTR
Psat6g005760.5.five_prime_utr2Psat6g005760.5.five_prime_utr2_Ps_Cameor_v1aPisum sativumfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat6g005760.5.cds1Psat6g005760.5.cds1_Ps_Cameor_v1aPisum sativumCDS
Psat6g005760.5.cds2Psat6g005760.5.cds2_Ps_Cameor_v1aPisum sativumCDS
Psat6g005760.5.cds3Psat6g005760.5.cds3_Ps_Cameor_v1aPisum sativumCDS
Psat6g005760.5.cds4Psat6g005760.5.cds4_Ps_Cameor_v1aPisum sativumCDS
Psat6g005760.5.cds5Psat6g005760.5.cds5_Ps_Cameor_v1aPisum sativumCDS
Psat6g005760.5.cds6Psat6g005760.5.cds6_Ps_Cameor_v1aPisum sativumCDS
Psat6g005760.5.cds7Psat6g005760.5.cds7_Ps_Cameor_v1aPisum sativumCDS
Psat6g005760.5.cds8Psat6g005760.5.cds8_Ps_Cameor_v1aPisum sativumCDS


Homology
[Close]
BLAST of Psat6g005760.5 vs. DB:Swiss
Match: VPS25_ARATH (Vacuolar protein sorting-associated protein 25 OS=Arabidopsis thaliana OX=3702 GN=VPS25 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.246e-67
Identity = 94/114 (82.46%), Postives = 108/114 (94.74%), Query Frame = 1 
Query:  880 MQKLGEFKLPNFFNYPPYFTLQPVRDTREKQIQLWKELIIDYCKTQKIFVIGIEDEFPLFTNTVIERSLTHEAREAFLSALVSEGRAEWMDKGRRKCLILWHRIQDWADILLQF 1221
            MQKL +FKLP FFNYPPYFTLQPVRDTREKQIQLWKELI+DYCK+QKIF+IG+E++FPLF+N+ I+RSL+HEARE FLSA+V EGRAEW+DKG RKCLILWHRIQDWADI+LQF
Sbjct:    1 MQKLADFKLPQFFNYPPYFTLQPVRDTREKQIQLWKELILDYCKSQKIFLIGVEEDFPLFSNSAIDRSLSHEARETFLSAIVGEGRAEWLDKGHRKCLILWHRIQDWADIVLQF 114
[Close]
BLAST of Psat6g005760.5 vs. DB:Swiss
Match: VPS25_DANRE (Vacuolar protein-sorting-associated protein 25 OS=Danio rerio OX=7955 GN=vps25 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 7.936e-24
Identity = 43/110 (39.09%), Postives = 70/110 (63.64%), Query Frame = 1 
Query:  898 FKLPNFFNYPPYFTLQPVRDTREKQIQLWKELIIDYCKTQKIFVIGI--EDEFPLFTNTVIERSLTHEAREAFLSALVSEGRAEWMDKGRRKCLILWHRIQDWADILLQF 1221
            F+ P  +N+PP+FTLQP  DTR+KQ+  W  L++ YC+ +K++ + +    E P+F N  IER L+ EA +     L  +G  EW+DK + +CLI+W R ++W  ++ Q+
Sbjct:    3 FEWPWQYNFPPFFTLQPNVDTRQKQLAAWCSLVLSYCRHRKLYTLDVLEAQESPVFNNKKIERKLSVEAIQVVFEELRKKGNLEWLDKNKSRCLIMWRRPEEWGKLIYQW 112
[Close]
BLAST of Psat6g005760.5 vs. DB:Swiss
Match: VPS25_XENLA (Vacuolar protein-sorting-associated protein 25 OS=Xenopus laevis OX=8355 GN=vps25 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.002e-22
Identity = 42/110 (38.18%), Postives = 69/110 (62.73%), Query Frame = 1 
Query:  898 FKLPNFFNYPPYFTLQPVRDTREKQIQLWKELIIDYCKTQKIFVIGIED--EFPLFTNTVIERSLTHEAREAFLSALVSEGRAEWMDKGRRKCLILWHRIQDWADILLQF 1221
            F+ P  +N+PP+FTLQP  DTR+KQ+  W  L++ YC+  K++ + + +  E PLF N  I+R L+ E+ +  L  L  +G  EW+DK + + LI+W R  +W  ++ Q+
Sbjct:    3 FEWPWQYNFPPFFTLQPNVDTRQKQLSAWSSLVLSYCRQNKLYTMNLMEIQESPLFNNKKIQRKLSLESVQVVLEELRKKGNLEWIDKNKSRFLIMWRRPDEWGKVIYQW 112
[Close]
BLAST of Psat6g005760.5 vs. DB:Swiss
Match: VPS25_BOVIN (Vacuolar protein-sorting-associated protein 25 OS=Bos taurus OX=9913 GN=VPS25 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.394e-18
Identity = 39/110 (35.45%), Postives = 65/110 (59.09%), Query Frame = 1 
Query:  898 FKLPNFFNYPPYFTLQPVRDTREKQIQLWKELIIDYCKTQKIFVIGIED--EFPLFTNTVIERSLTHEAREAFLSALVSEGRAEWMDKGRRKCLILWHRIQDWADILLQF 1221
            F+ P  + +PP+FTLQP  DTR+KQ+  W  L++ +C+  K   + + +  E PLF N  ++R L  E+ +  L  L  +G  EW+DK +   LI+W R ++W  ++ Q+
Sbjct:    5 FEWPWQYRFPPFFTLQPNVDTRQKQLAAWCSLVLTFCRLHKQSSMTVMEAQESPLFNNVKLQRKLPVESIQVVLEELRKKGNLEWLDKNKSSFLIMWRRPEEWGKLIYQW 114
[Close]
BLAST of Psat6g005760.5 vs. DB:Swiss
Match: VPS25_RAT (Vacuolar protein-sorting-associated protein 25 OS=Rattus norvegicus OX=10116 GN=Vps25 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.635e-18
Identity = 39/110 (35.45%), Postives = 65/110 (59.09%), Query Frame = 1 
Query:  898 FKLPNFFNYPPYFTLQPVRDTREKQIQLWKELIIDYCKTQKIFVIGIED--EFPLFTNTVIERSLTHEAREAFLSALVSEGRAEWMDKGRRKCLILWHRIQDWADILLQF 1221
            F+ P  + +PP+FTLQP  DTR+KQ+  W  L++ +C+  K   + + +  E PLF N  ++R L  E+ +  L  L  +G  EW+DK +   LI+W R ++W  ++ Q+
Sbjct:    5 FEWPWQYRFPPFFTLQPNVDTRQKQLAAWCSLVLSFCRLHKQSSMTVMEAQESPLFNNVKLQRKLPVESIQIVLEELRKKGNLEWLDKNKSSFLIMWRRPEEWGKLIYQW 114
[Close]
BLAST of Psat6g005760.5 vs. DB:Swiss
Match: VPS25_MOUSE (Vacuolar protein-sorting-associated protein 25 OS=Mus musculus OX=10090 GN=Vps25 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.781e-18
Identity = 39/110 (35.45%), Postives = 65/110 (59.09%), Query Frame = 1 
Query:  898 FKLPNFFNYPPYFTLQPVRDTREKQIQLWKELIIDYCKTQKIFVIGIED--EFPLFTNTVIERSLTHEAREAFLSALVSEGRAEWMDKGRRKCLILWHRIQDWADILLQF 1221
            F+ P  + +PP+FTLQP  DTR+KQ+  W  L++ +C+  K   + + +  E PLF N  ++R L  E+ +  L  L  +G  EW+DK +   LI+W R ++W  ++ Q+
Sbjct:    5 FEWPWQYRFPPFFTLQPNVDTRQKQLAAWCSLVLSFCRLHKQSSMTVMEAQESPLFNNVKLQRKLPVESIQIVLEELRKKGNLEWLDKNKSSFLIMWRRPEEWGKLIYQW 114
[Close]
BLAST of Psat6g005760.5 vs. DB:Swiss
Match: VPS25_HUMAN (Vacuolar protein-sorting-associated protein 25 OS=Homo sapiens OX=9606 GN=VPS25 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.856e-18
Identity = 39/110 (35.45%), Postives = 65/110 (59.09%), Query Frame = 1 
Query:  898 FKLPNFFNYPPYFTLQPVRDTREKQIQLWKELIIDYCKTQKIFVIGIED--EFPLFTNTVIERSLTHEAREAFLSALVSEGRAEWMDKGRRKCLILWHRIQDWADILLQF 1221
            F+ P  + +PP+FTLQP  DTR+KQ+  W  L++ +C+  K   + + +  E PLF N  ++R L  E+ +  L  L  +G  EW+DK +   LI+W R ++W  ++ Q+
Sbjct:    5 FEWPWQYRFPPFFTLQPNVDTRQKQLAAWCSLVLSFCRLHKQSSMTVMEAQESPLFNNVKLQRKLPVESIQIVLEELRKKGNLEWLDKSKSSFLIMWRRPEEWGKLIYQW 114
[Close]
BLAST of Psat6g005760.5 vs. DB:Swiss
Match: VPS25_DICDI (Vacuolar protein-sorting-associated protein 25 OS=Dictyostelium discoideum OX=44689 GN=vps25 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 9.238e-16
Identity = 37/125 (29.60%), Postives = 70/125 (56.00%), Query Frame = 1 
Query:  898 FKLPNFFNYPPYFTLQPVRDTREKQIQLWKELIIDYCKTQKIFVIGIEDEFP----LFTNTVIERSLTHEAREAFLSALVSEGRAEWM-------------DKGRRKCLILWHRIQDWADILLQF 1221
            F+ P +++  P+FT+QP+ +TR+KQ Q+W++LI+ YC+  KI+ + I +       LF N  I R L+ EA ++ +  ++  G AEW+             +    + LI+W +  +WA ++ ++
Sbjct:    6 FQFPPYYHKEPFFTIQPILNTRKKQFQMWQDLILQYCRYYKIYELDINESIKSNSVLFNNEKINRKLSREALKSIIDDIIENGFAEWVDKEKEKEKEKDKDNNNNNRVLIMWRKPDEWASLIYKW 130
[Close]
BLAST of Psat6g005760.5 vs. DB:Swiss
Match: VPS25_DROME (Vacuolar protein-sorting-associated protein 25 OS=Drosophila melanogaster OX=7227 GN=Vps25 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.246e-14
Identity = 35/109 (32.11%), Postives = 65/109 (59.63%), Query Frame = 1 
Query:  889 LGEFKLPNFFNYPPYFTLQPVRDTREKQIQLWKELIIDYCKTQKIFVIGIEDE-FPLFTNTVIERSLTHEAREAFLSALVSEGRAEWMDKGRRKCLILWHRIQDWADIL 1212
            + EF+ P  + +PP+FTLQP  +TR++Q+++W +L + Y +    F + I D+  PLF N  ++R L+ E   A L  L   G A  +DK R++  + W  ++++ +++
Sbjct:    1 MAEFQWPWEYTFPPFFTLQPHEETRQQQLKVWTDLFLKYLRHTNRFTLSIGDQNSPLFHNEALKRRLSPELVLAILGELERSGHANPLDKRRQEWQVYWFTLEEYGNMV 109
[Close]
BLAST of Psat6g005760.5 vs. DB:Swiss
Match: YIPL_SOLTU (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.302e-11
Identity = 30/57 (52.63%), Postives = 39/57 (68.42%), Query Frame = 2 
Query: 1163 ENVLFYGIGFKIGLTFYYS-FVNTTTGAPEERMMLSGLHTVADIFCCCCGQILGWKY 1330
            EN++      K G  + +S  VN T+G  E RMM++G+HTVADIFC CCG I+GWKY
Sbjct:   27 ENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMMMTGMHTVADIFCVCCGSIVGWKY 83
The following BLAST results are available for this feature:
BLAST of Psat6g005760.5 vs. DB:Swiss
Analysis Date: 2019-09-12 (BLAST: P. sativum Cameor genome v1a vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
VPS25_ARATH1.246e-6782.46Vacuolar protein sorting-associated protein 25 OS=... [more]
VPS25_DANRE7.936e-2439.09Vacuolar protein-sorting-associated protein 25 OS=... [more]
VPS25_XENLA1.002e-2238.18Vacuolar protein-sorting-associated protein 25 OS=... [more]
VPS25_BOVIN3.394e-1835.45Vacuolar protein-sorting-associated protein 25 OS=... [more]
VPS25_RAT3.635e-1835.45Vacuolar protein-sorting-associated protein 25 OS=... [more]
VPS25_MOUSE3.781e-1835.45Vacuolar protein-sorting-associated protein 25 OS=... [more]
VPS25_HUMAN3.856e-1835.45Vacuolar protein-sorting-associated protein 25 OS=... [more]
VPS25_DICDI9.238e-1629.60Vacuolar protein-sorting-associated protein 25 OS=... [more]
VPS25_DROME1.246e-1432.11Vacuolar protein-sorting-associated protein 25 OS=... [more]
YIPL_SOLTU1.302e-1152.63Protein yippee-like OS=Solanum tuberosum OX=4113 P... [more]
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InterPro
Analysis Name: InterProScan: P. sativum Cameor genome v1a
Date Performed: 2019-09-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 189..213
NoneNo IPR availableCOILSCoilCoilcoord: 27..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
IPR008570ESCRT-II complex, Vps25 subunitPFAMPF05871ESCRT-IIcoord: 306..410
e-value: 7.1E-31
score: 107.3
IPR014041ESCRT-II complex, Vps25 subunit, N-terminal winged helixGENE3D1.10.10.570coord: 297..394
e-value: 1.4E-29
score: 104.5
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 300..400

Sequences
The following sequences are available for this feature:

mRNA sequence

>Psat6g005760.5_Ps_Cameor_v1a ID=Psat6g005760.5_Ps_Cameor_v1a; Name=Psat6g005760.5; organism=Pisum sativum; type=mRNA; length=4060bp
AATAATAATAATAGAGGTAAGAAATAAAAAAAAGGCAAACAAAAAATAAA
GCACCTGTGATGTTTCTTTTTCTTTACTTAAGAGAAAGATAGGCACGAGC
GTTTTGCTACTGTACCCCCACGATCCACCATACACCCTCATCTTCTTCTT
CTTCGCCCTTTTCAGGTTCTCTCTAAAAGCACCTGTGATGTTTCTTTTTC
TTTACTTAAGAGAAAGATAGGCACGAGCGTTTTGCTACTGTACCCCCACG
ATCCACCATACACCCTCATCTTCTTCTTCTTCGCCCTTTTCAGGTTCTCT
CTACCATTTTCCTTCTTCTTTGATTTATTCTTTTATATTCTCTGTACTTT
TCAATTATCTTTACTTTTCAATTCTCTTTCTTTAAGACTTCAATTTTATC
TTTTTCTTCTTTTTGACTTTGATTGCTACGGCGCTACCCCTTCAAACCCT
TGTTCTTCCAGATCGGTTTAAGGTTCATTTCTTTGGTAGAATTTCATCTC
AAAAATGCTTTGATTTGATCGTGCGTTTCTTCCTCTTTAGTTGTTAAATT
GGTGAATTGTGTTATAGGGTTTATAAGATTAATGTGTGTTTGAATTTTTT
TTCTTATGAATTGTGCTTTCATTTTTGTTTTGTTCAATATTCTTGCTTGA
TTTTTGTGGAACTTTAACTTGGATTTCTAGGGTTTTTGCCTTTTGAAATA
TTGATGCATAGGTTTTAGGATGTAGTTGAATTTAATATTATCTTATGCTT
CATTTGACAGGAAATGGCAGAGGGTGAAGATGTTGCAATGTCGGGTTTGA
AGTCTCCGTTGAGTCAATCACATGAAACGTGGAAGGAAGGGATGGAAAGA
AACCAATCTCAAGTCGATGTATTGCAAGAAAAGCTTAAGGAAATAAAGGC
TTGTATACATGGATCAGAGGAAGACTCGAAAAAGGAATTAGAGGTTTTGT
GGCAAAGAGTAAGGACTACTAATACGTTGCTTACGTACTTGAAATCAAAA
GCTAGAATCATGGATATTCCTCATCTAGCACATACGTCTTGCGGCATCAA
GAAATTAGATGGAGTAGGGCTTGTTGATAAAGACGGGATTCCGTTATCGG
GTTGGTCTAGGAATGTTGATCTTTCTTCGTTTGATGGGAAAGACGAAGAA
GAATCTTGGATAGGAATTAGCCGTCATCAAGGTTCGTTAGATGAACAAGA
TGCAGTTTATATAGGTGAGAACTCTGTTCAGATGGTCACTGATGTGATGG
AGCCTTGTCAAAGGGTTTGTTGGCAGAATCGGAACAACAATTGAGAAGGA
AGTAAGGTCAGGAAGAAATTATGCGAAAGTCTGCTCAGTTAGAGAATTTG
TCTATGAAATTGGAAGAAATGGAGAGTTTTGCTTTGGGAACAAATAGTAT
TTTGAATGACATGAGGCAAAGAGTTGCGGATTTGGTGGAAGAAACAACTA
GACAGAGAGAGCGAGCTGCTGAAAATGAAGAAGAGCTTTGTAGAGTGAAA
CAGGAATTTGTTTCTCTCAAATCATATGTTAGTAGTCTAATCACAGTGAG
AGAAACTTTACTATCTTCCGAGAAGCAATTCCAAACTATTGAGAAGCTGT
TTGAACGGTAAATATTTATTTCATTAAACATTTAATTGTCGCATGCAAGT
GCCTTGATAATTATCTGGTAGCTGCATCTGATTGTTTGGACCTAGTTGTG
TTAGTATAATTCCTGCTTCATTTTAATACTAAATTTAAATTTCTCTAGTA
TAAGTTCTCTTGATGGAATATGACAGGGAATTGATTGCAACACTTGAAAG
ATGCAGAAATTGGGAGAGTTCAAACTACCTAATTTCTTCAATTACCCACC
TTACTTCACGTAAATTCCTCTTTTTCTTCTCTTTCGTTGATTATTTTCAT
CAAATTCATTTTTTTTCTTTCAATTTGGCAATTGTGCATATTCAAATGAG
ATATAACTTATTGTACTTAATACAAGAGTTCAATTTTTACTCATTGTGAA
TTTCAATGTATAATGCTTATTGTGTGATTGTTAATAGTGAAAAAGTGATT
GACTTGGTTGATTAGGTTTTGTTTTTGGATTCTGCTTTTCAGTTTGCAGC
AGTAAGGGAAACTAGAGAGAAGCAATCAGTTAGGAAAGAGCTTATATAGA
TTACTGTAACACAGAAGATTTTGTGATTGGAATTGAAGATGAATTTCACT
TTTACAAATACTGTAATTGAAGTAACTTGAATTTCTGCTTTTGTTGCAAT
NTGGAATATGACAGGGAATTGATTGCAACACTTGAAAGATGCAGAAATTG
GGAGAGTTCAAACTACCTAATTTCTTCAATTACCCACCTTACTTCACGTA
AATTCCTCTTTTTCTTCTCTTTCGTTGATTATTTTCATCAAATTCATTTT
TTTTCTTTCAAATTTGGCAAATTGTGCATATTCAAATGAGTCAAGTAACT
TTATTGGTACTTAATACAAAGAGTTCAATTTTTTACTCATTTGTGAATTT
CAATGTATAATGCTTATTGTGTGATTGTTAATAGTGAAAAAAGTGATTGA
CTTGGTTGATTAGGTCTTTGTTTTTGGATTCTGCTTTTCAGTTTGCAGCC
AGTAAGGGACACTAGAGAGAAGCAAATACAGTTATGGAAAGAGCTTATTA
TAGATTACTGTAAAACACAGAAGATTTTTGTGATTGGAATTGAAGATGAA
TTTCCACTTTTTACAAATACTGTAATTGAAAGTAAGCTTGAATTTCCTGC
TTTTGTTGCCAATTTCCATGGAGGTTGTCGAAATCGACGAGTCCTATTTA
TAAATACTTGCTTAGTTTTGTGTTTTGTTTATTTCTACTTTTTTGTTGAA
TAATTGTTTTCAGATTTTCGATAGTGCAGGATCTCTTACTCATGAAGCTA
GAGAAGCGTTCCTTTCAGCCTTAGTTTCTGAGGGTATGCTTTGTGTTTTT
GGATTTGTAATGCTGGTAATTGGGTCGAGGGGAAAATGTCTCAGGTTTGT
TATTCTGTTTGACAGGACGAGCTGAATGGATGGATAAAGGACGTAGAAAA
TGTCTTATTTTATGGCATCGGATTCAAGATTGGGCTGACATTTTACTACA
GTTTGTAAGTTTGAATTCTAGTTTAATAATCACTTCATGCAAATAGGTAT
TTATTTCCTTTGAATTCTAGTTTGAATGCTGGTGTCCGTGATTCATATTT
GGAAACATACCAGGCTTTTTGTGGCTCATAAGAATTGCATTCAGCATGAT
TTGAAGTTACAATTAATCGAGAAAATATGGTAGTCGTGTTCACTTTGTTA
AGGAATTGGTTCATGAGTTTAGAATGACAGCAAACTACCCTGATCTTTTG
ATGCTATTGACACAAGTTTGACTATGTGCTTTGAATTCAACCGAATAACA
TATGAGCTGGTTTGAACGTGCAGCTGTTGAAAAAGAATAATAGCAGACAT
GGTGCAGTGTTACACTGTGGCTGTGCTACATCTAATCATGGTCTCAATTG
TTGCATCTATGTAAATTTTTGTTGCAAATTGTTTAACTCTTAGATTTAGG
ACTTTAGTTAATAAGCCTGTGATGTACCTAGGAATATGAAGCCAATAACT
TTTAAATGCCCGCTATCTATTCGAAACAGGTATGCTTTTACATTGTGGCA
GATGAAATATAAATTCGTTGTTTTAAAATTGTTCATTGTTTCTTTCCCAT
ATAAATTCCCGTTGTTGCTACTATCGCACATTGATTCAAAACTTTGGCAA
AAAGAACATGTCTCAAAAGAAACCGAAGCTGGTTTGAGATGACTGCATTT
TGCGTATTAGAACTTGTAACACATGAATTCAACAAAAAATAGGGAACACA
CTACAATTGGTTGATTGTTGTCATTATTAGTCGATAGTATCACTAGACCT
GAATATTCTATACTCTCTATAGCATGCTTATGTTTTGAATCTGTGAATCA
GCGTGAACACGACAACTGGAGCACCGGAAGAAAGGATGATGCTTTCAGGA
TTGCATACTGTGGCAGATATCTTTTGTTGTTGCTGTGGTCAAATACTTGG
CTGGAAATAT
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protein sequence of Psat6g005760.5_Ps_Cameor_v1a

>Psat6g005760.5_Ps_Cameor_v1a ID=Psat6g005760.5_Ps_Cameor_v1a; Name=Psat6g005760.5_Ps_Cameor_v1a; organism=Pisum sativum; type=polypeptide; length=443bp
MAEGEDVAMSGLKSPLSQSHETWKEGMERNQSQVDVLQEKLKEIKACIHG
SEEDSKKELEVLWQRVRTTNTLLTYLKSKARIMDIPHLAHTSCGIKKLDG
VGLVDKDGIPLSGWSRNVDLSSFDGKDEEESWIGISRHQGSLDEQDAVYI
GENSVQMVTDVMEPCQRLENLSMKLEEMESFALGTNSILNDMRQRVADLV
EETTRQRERAAENEEELCRVKQEFVSLKSYVSSLITVRETLLSSEKQFQT
IEKLFERELIATLERCRNWESSNYLISSITHLTSRKFLFFFSFMQKLGEF
KLPNFFNYPPYFTLQPVRDTREKQIQLWKELIIDYCKTQKIFVIGIEDEF
PLFTNTVIERSLTHEAREAFLSALVSEGRAEWMDKGRRKCLILWHRIQDW
ADILLQFREHDNWSTGRKDDAFRIAYCGRYLLLLLWSNTWLEI
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mRNA from alignment at chr6LG2:3997581..4001640+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat6g005760.5_Ps_Cameor_v1a ID=Psat6g005760.5_Ps_Cameor_v1a; Name=Psat6g005760.5; organism=Pisum sativum; type=mRNA; length=4060bp; location=Sequence derived from: chr6LG2:3997581..4001640+ (Pisum sativum
AATAATAATAATAGAGGTAAGAAATAAAAAAAAGGCAAACAAAAAATAAA
GCACCTGTGATGTTTCTTTTTCTTTACTTAAGAGAAAGATAGGCACGAGC
GTTTTGCTACTGTACCCCCACGATCCACCATACACCCTCATCTTCTTCTT
CTTCGCCCTTTTCAGGTTCTCTCTAAAAGCACCTGTGATGTTTCTTTTTC
TTTACTTAAGAGAAAGATAGGCACGAGCGTTTTGCTACTGTACCCCCACG
ATCCACCATACACCCTCATCTTCTTCTTCTTCGCCCTTTTCAGGTTCTCT
CTACCATTTTCCTTCTTCTTTGATTTATTCTTTTATATTCTCTGTACTTT
TCAATTATCTTTACTTTTCAATTCTCTTTCTTTAAGACTTCAATTTTATC
TTTTTCTTCTTTTTGACTTTGATTGCTACGGCGCTACCCCTTCAAACCCT
TGTTCTTCCAGATCGGTTTAAGGTTCATTTCTTTGGTAGAATTTCATCTC
AAAAATGCTTTGATTTGATCGTGCGTTTCTTCCTCTTTAGTTGTTAAATT
GGTGAATTGTGTTATAGGGTTTATAAGATTAATGTGTGTTTGAATTTTTT
TTCTTATGAATTGTGCTTTCATTTTTGTTTTGTTCAATATTCTTGCTTGA
TTTTTGTGGAACTTTAACTTGGATTTCTAGGGTTTTTGCCTTTTGAAATA
TTGATGCATAGGTTTTAGGATGTAGTTGAATTTAATATTATCTTATGCTT
CATTTGACAGGAAATGGCAGAGGGTGAAGATGTTGCAATGTCGGGTTTGA
AGTCTCCGTTGAGTCAATCACATGAAACGTGGAAGGAAGGGATGGAAAGA
AACCAATCTCAAGTCGATGTATTGCAAGAAAAGCTTAAGGAAATAAAGGC
TTGTATACATGGATCAGAGGAAGACTCGAAAAAGGAATTAGAGGTTTTGT
GGCAAAGAGTAAGGACTACTAATACGTTGCTTACGTACTTGAAATCAAAA
GCTAGAATCATGGATATTCCTCATCTAGCACATACGTCTTGCGGCATCAA
GAAATTAGATGGAGTAGGGCTTGTTGATAAAGACGGGATTCCGTTATCGG
GTTGGTCTAGGAATGTTGATCTTTCTTCGTTTGATGGGAAAGACGAAGAA
GAATCTTGGATAGGAATTAGCCGTCATCAAGGTTCGTTAGATGAACAAGA
TGCAGTTTATATAGGTGAGAACTCTGTTCAGATGGTCACTGATGTGATGG
AGCCTTGTCAAAGGGTTTGTTGGCAGAATCGGAACAACAATTGAGAAGGA
AGTAAGGTCAGGAAGAAATTATGCGAAAGTCTGCTCAGTTAGAGAATTTG
TCTATGAAATTGGAAGAAATGGAGAGTTTTGCTTTGGGAACAAATAGTAT
TTTGAATGACATGAGGCAAAGAGTTGCGGATTTGGTGGAAGAAACAACTA
GACAGAGAGAGCGAGCTGCTGAAAATGAAGAAGAGCTTTGTAGAGTGAAA
CAGGAATTTGTTTCTCTCAAATCATATGTTAGTAGTCTAATCACAGTGAG
AGAAACTTTACTATCTTCCGAGAAGCAATTCCAAACTATTGAGAAGCTGT
TTGAACGGTAAATATTTATTTCATTAAACATTTAATTGTCGCATGCAAGT
GCCTTGATAATTATCTGGTAGCTGCATCTGATTGTTTGGACCTAGTTGTG
TTAGTATAATTCCTGCTTCATTTTAATACTAAATTTAAATTTCTCTAGTA
TAAGTTCTCTTGATGGAATATGACAGGGAATTGATTGCAACACTTGAAAG
ATGCAGAAATTGGGAGAGTTCAAACTACCTAATTTCTTCAATTACCCACC
TTACTTCACGTAAATTCCTCTTTTTCTTCTCTTTCGTTGATTATTTTCAT
CAAATTCATTTTTTTTCTTTCAATTTGGCAATTGTGCATATTCAAATGAG
ATATAACTTATTGTACTTAATACAAGAGTTCAATTTTTACTCATTGTGAA
TTTCAATGTATAATGCTTATTGTGTGATTGTTAATAGTGAAAAAGTGATT
GACTTGGTTGATTAGGTTTTGTTTTTGGATTCTGCTTTTCAGTTTGCAGC
AGTAAGGGAAACTAGAGAGAAGCAATCAGTTAGGAAAGAGCTTATATAGA
TTACTGTAACACAGAAGATTTTGTGATTGGAATTGAAGATGAATTTCACT
TTTACAAATACTGTAATTGAAGTAACTTGAATTTCTGCTTTTGTTGCAAT
NTGGAATATGACAGGGAATTGATTGCAACACTTGAAAGATGCAGAAATTG
GGAGAGTTCAAACTACCTAATTTCTTCAATTACCCACCTTACTTCACGTA
AATTCCTCTTTTTCTTCTCTTTCGTTGATTATTTTCATCAAATTCATTTT
TTTTCTTTCAAATTTGGCAAATTGTGCATATTCAAATGAGTCAAGTAACT
TTATTGGTACTTAATACAAAGAGTTCAATTTTTTACTCATTTGTGAATTT
CAATGTATAATGCTTATTGTGTGATTGTTAATAGTGAAAAAAGTGATTGA
CTTGGTTGATTAGGTCTTTGTTTTTGGATTCTGCTTTTCAGTTTGCAGCC
AGTAAGGGACACTAGAGAGAAGCAAATACAGTTATGGAAAGAGCTTATTA
TAGATTACTGTAAAACACAGAAGATTTTTGTGATTGGAATTGAAGATGAA
TTTCCACTTTTTACAAATACTGTAATTGAAAGTAAGCTTGAATTTCCTGC
TTTTGTTGCCAATTTCCATGGAGGTTGTCGAAATCGACGAGTCCTATTTA
TAAATACTTGCTTAGTTTTGTGTTTTGTTTATTTCTACTTTTTTGTTGAA
TAATTGTTTTCAGATTTTCGATAGTGCAGGATCTCTTACTCATGAAGCTA
GAGAAGCGTTCCTTTCAGCCTTAGTTTCTGAGGGTATGCTTTGTGTTTTT
GGATTTGTAATGCTGGTAATTGGGTCGAGGGGAAAATGTCTCAGGTTTGT
TATTCTGTTTGACAGGACGAGCTGAATGGATGGATAAAGGACGTAGAAAA
TGTCTTATTTTATGGCATCGGATTCAAGATTGGGCTGACATTTTACTACA
GTTTGTAAGTTTGAATTCTAGTTTAATAATCACTTCATGCAAATAGGTAT
TTATTTCCTTTGAATTCTAGTTTGAATGCTGGTGTCCGTGATTCATATTT
GGAAACATACCAGGCTTTTTGTGGCTCATAAGAATTGCATTCAGCATGAT
TTGAAGTTACAATTAATCGAGAAAATATGGTAGTCGTGTTCACTTTGTTA
AGGAATTGGTTCATGAGTTTAGAATGACAGCAAACTACCCTGATCTTTTG
ATGCTATTGACACAAGTTTGACTATGTGCTTTGAATTCAACCGAATAACA
TATGAGCTGGTTTGAACGTGCAGCTGTTGAAAAAGAATAATAGCAGACAT
GGTGCAGTGTTACACTGTGGCTGTGCTACATCTAATCATGGTCTCAATTG
TTGCATCTATGTAAATTTTTGTTGCAAATTGTTTAACTCTTAGATTTAGG
ACTTTAGTTAATAAGCCTGTGATGTACCTAGGAATATGAAGCCAATAACT
TTTAAATGCCCGCTATCTATTCGAAACAGGTATGCTTTTACATTGTGGCA
GATGAAATATAAATTCGTTGTTTTAAAATTGTTCATTGTTTCTTTCCCAT
ATAAATTCCCGTTGTTGCTACTATCGCACATTGATTCAAAACTTTGGCAA
AAAGAACATGTCTCAAAAGAAACCGAAGCTGGTTTGAGATGACTGCATTT
TGCGTATTAGAACTTGTAACACATGAATTCAACAAAAAATAGGGAACACA
CTACAATTGGTTGATTGTTGTCATTATTAGTCGATAGTATCACTAGACCT
GAATATTCTATACTCTCTATAGCATGCTTATGTTTTGAATCTGTGAATCA
GCGTGAACACGACAACTGGAGCACCGGAAGAAAGGATGATGCTTTCAGGA
TTGCATACTGTGGCAGATATCTTTTGTTGTTGCTGTGGTCAAATACTTGG
CTGGAAATAT
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Coding sequence (CDS) from alignment at chr6LG2:3997581..4001640+

>Psat6g005760.5_Ps_Cameor_v1a ID=Psat6g005760.5_Ps_Cameor_v1a; Name=Psat6g005760.5; organism=Pisum sativum; type=CDS; length=2660bp; location=Sequence derived from: chr6LG2:3997581..4001640+ (Pisum sativum
ATGGCAGAGGGTGAAGATGTTGCAATGTCGGGTTTGAAGTCTCCGTTGAG
TCAATCACATGAAACGTGGAAGGAAGGGATGGAAAGAAACCAATCTCAAG
TCGATGTATTGCAAGAAAAGCTTAAGGAAATAAAGGCTTGTATACATGGA
TCAGAGGAAGACTCGAAAAAGGAATTAGAGGTTTTGTGGCAAAGAGTAAG
GACTACTAATACGTTGCTTACGTACTTGAAATCAAAAGCTAGAATCATGG
ATATTCCTCATCTAGCACATACGTCTTGCGGCATCAAGAAATTAGATGGA
GTAGGGCTTGTTGATAAAGACGGGATTCCGTTATCGGGTTGGTCTAGGAA
TGTTGATCTTTCTTCGTTTGATGGGAAAGACGAAGAAGAATCTTGGATAG
GAATTAGCCGTCATCAAGGTTCGTTAGATGAACAAGATGCAGTTTATATA
GGTGAGAACTCTGTTCAGATGGTCACTGATGTGATGGAGCCTTGTCAAAG
GATGGCAGAGGGTGAAGATGTTGCAATGTCGGGTTTGAAGTCTCCGTTGA
GTCAATCACATGAAACGTGGAAGGAAGGGATGGAAAGAAACCAATCTCAA
GTCGATGTATTGCAAGAAAAGCTTAAGGAAATAAAGGCTTGTATACATGG
ATCAGAGGAAGACTCGAAAAAGGAATTAGAGGTTTTGTGGCAAAGAGTAA
GGACTACTAATACGTTGCTTACGTACTTGAAATCAAAAGCTAGAATCATG
GATATTCCTCATCTAGCACATACGTCTTGCGGCATCAAGAAATTAGATGG
AGTAGGGCTTGTTGATAAAGACGGGATTCCGTTATCGGGTTGGTCTAGGA
ATGTTGATCTTTCTTCGTTTGATGGGAAAGACGAAGAAGAATCTTGGATA
GGAATTAGCCGTCATCAAGGTTCGTTAGATGAACAAGATGCAGTTTATAT
AGGTGAGAACTCTGTTCAGATGGTCACTGATGTGATGGAGCCTTGTCAAA
GGTTAGAGAATTTGTCTATGAAATTGGAAGAAATGGAGAGTTTTGCTTTG
GGAACAAATAGTATTTTGAATGACATGAGGCAAAGAGTTGCGGATTTGGT
GGAAGAAACAACTAGACAGAGAGAGCGAGCTGCTGAAAATGAAGAAGAGC
TTTGTAGAGTGAAACAGGAATTTGTTTCTCTCAAATCATATGTTAGTAGT
CTAATCACAGTGAGAGAAACTTTACTATCTTCCGAGAAGCAATTCCAAAC
TATTGAGAAGCTGTTTGAACGTTAGAGAATTTGTCTATGAAATTGGAAGA
AATGGAGAGTTTTGCTTTGGGAACAAATAGTATTTTGAATGACATGAGGC
AAAGAGTTGCGGATTTGGTGGAAGAAACAACTAGACAGAGAGAGCGAGCT
GCTGAAAATGAAGAAGAGCTTTGTAGAGTGAAACAGGAATTTGTTTCTCT
CAAATCATATGTTAGTAGTCTAATCACAGTGAGAGAAACTTTACTATCTT
CCGAGAAGCAATTCCAAACTATTGAGAAGCTGTTTGAACGGGAATTGATT
GCAACACTTGAAAGATGCAGAAATTGGGAGAGTTCAAACTACCTAATTTC
TTCAATTACCCACCTTACTTCACGTAAATTCCTCTTTTTCTTCTCTTTCG
GAATTGATTGCAACACTTGAAAGATGCAGAAATTGGGAGAGTTCAAACTA
CCTAATTTCTTCAATTACCCACCTTACTTCACGTAAATTCCTCTTTTTCT
TCTCTTTCATGCAGAAATTGGGAGAGTTCAAACTACCTAATTTCTTCAAT
TACCCACCTTACTTCACATGCAGAAATTGGGAGAGTTCAAACTACCTAAT
TTCTTCAATTACCCACCTTACTTCACTTTGCAGCCAGTAAGGGACACTAG
AGAGAAGCAAATACAGTTATGGAAAGAGCTTATTATAGATTACTGTAAAA
CACAGAAGATTTTTGTGATTGGAATTGAAGATGAATTTCCACTTTTTACA
AATACTGTAATTGAAATTTGCAGCCAGTAAGGGACACTAGAGAGAAGCAA
ATACAGTTATGGAAAGAGCTTATTATAGATTACTGTAAAACACAGAAGAT
TTTTGTGATTGGAATTGAAGATGAATTTCCACTTTTTACAAATACTGTAA
TTGAAAGATCTCTTACTCATGAAGCTAGAGAAGCGTTCCTTTCAGCCTTA
GTTTCTGAGGGATCTCTTACTCATGAAGCTAGAGAAGCGTTCCTTTCAGC
CTTAGTTTCTGAGGGACGAGCTGAATGGATGGATAAAGGACGTAGAAAAT
GTCTTATTTTATGGCATCGGATTCAAGATTGGGCTGACATTTTACTACAG
TTTGACGAGCTGAATGGATGGATAAAGGACGTAGAAAATGTCTTATTTTA
TGGCATCGGATTCAAGATTGGGCTGACATTTTACTACAGTTTCGTGAACA
CGACAACTGGAGCACCGGAAGAAAGGATGATGCTTTCAGGATTGCATACT
GTGGCAGATATCTTTTGTTGTTGCTGTGGTCAAATACTTGGCTGGAAATA
TCGTGAACACGACAACTGGAGCACCGGAAGAAAGGATGATGCTTTCAGGA
TTGCATACTGTGGCAGATATCTTTTGTTGTTGCTGTGGTCAAATACTTGG
CTGGAAATAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008570ESCRT-II_cplx_Vps25-sub
IPR014041ESCRT-II_cplx_Vps25-sub_N
IPR036390WH_DNA-bd_sf
Vocabulary: Cellular Component
TermDefinition
GO:0000814ESCRT II complex
Vocabulary: Biological Process
TermDefinition
GO:0071985multivesicular body sorting pathway