rna-KK1_031792

Transcript Overview
Namerna-KK1_031792
Unique Namerna-KK1_031792_Cc_Asha_v1.0
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length2076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cajanus cajan Asha genome v1.02019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cccrR0330Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cccrR0331Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccccR113Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvR0451Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpvR0452Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccvuR0455Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccvuR0456Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caiccL0561Cicer arietinum ICC 4958 genome v2Cicer arietinum
caccL0605Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0912Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccL0035Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0395Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0455Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asccL0075Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asccL0819Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cctifR0361Vicia faba cv. Tiffany genome v1.0Vicia faba
ccvfhR0367Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0368Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvrvR0374Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvrvR0375Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvuaR0401Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvuaR0402Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0412Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvssR0413Vicia sativa cv. Studenica genome v1.0Vicia sativa
canccL0606Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjccL0415Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0892Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccL0652Cicer arietinum
carccL1028Cicer arietinum
ccccaR0490Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0491Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumR0451Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0452Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
Vum_02G01806.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va04G019100.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
evm.model.Chr09.107Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
LR48_mrnaVigan04g070100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Tiffany.R1.2g072640.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun09g096300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.009G171300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.2g088480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_07428Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-TanjilR_11585Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014646991.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cr_12592.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-TanjilR_28920Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_13309.1Cicer arietinum ICC 4958 genome v2Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Cc_v2.0_05781.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-KK1_031792gene-KK1_031792_Cc_Asha_v1.0Cajanus cajangene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_031792rna-KK1_031792_Cc_Asha_v1.0-proteinCajanus cajanpolypeptide
rna-KK1_031792_Cc_Asha_v1.0rna-KK1_031792_Cc_Asha_v1.0Cajanus cajanpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:374238..374411rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:374238..374411Cajanus cajanCDS
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:374015..374113rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:374015..374113Cajanus cajanCDS
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:372791..373239rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:372791..373239Cajanus cajanCDS
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:372595..372704rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:372595..372704Cajanus cajanCDS
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:372301..372443rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:372301..372443Cajanus cajanCDS
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:371737..372216rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:371737..372216Cajanus cajanCDS
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:371016..371636rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:371016..371636Cajanus cajanCDS
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:374238..374411rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:374238..374411Cajanus cajanCDS
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:374015..374113rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:374015..374113Cajanus cajanCDS
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:372791..373239rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:372791..373239Cajanus cajanCDS
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:372595..372704rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:372595..372704Cajanus cajanCDS
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:372301..372443rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:372301..372443Cajanus cajanCDS
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:371737..372216rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:371737..372216Cajanus cajanCDS
rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:371016..371636rna-KK1_031792_Cc_Asha_v1.0-CDS-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:371016..371636Cajanus cajanCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:374238..374411rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:374238..374411Cajanus cajanexon
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:374015..374113rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:374015..374113Cajanus cajanexon
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:372791..373239rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:372791..373239Cajanus cajanexon
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:372595..372704rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:372595..372704Cajanus cajanexon
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:372301..372443rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:372301..372443Cajanus cajanexon
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:371737..372216rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:371737..372216Cajanus cajanexon
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:371016..371636rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571847872:371016..371636Cajanus cajanexon
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:374238..374411rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:374238..374411Cajanus cajanexon
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:374015..374113rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:374015..374113Cajanus cajanexon
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:372791..373239rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:372791..373239Cajanus cajanexon
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:372595..372704rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:372595..372704Cajanus cajanexon
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:372301..372443rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:372301..372443Cajanus cajanexon
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:371737..372216rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:371737..372216Cajanus cajanexon
rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:371016..371636rna-KK1_031792_Cc_Asha_v1.0-exon-Scaffold125850-KQ483552.1_Cc_Asha_v1.0-1571082112:371016..371636Cajanus cajanexon


Homology
[Close]
BLAST of rna-KK1_031792 vs. DB:Swiss
Match: SEOB_ARATH (Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana OX=3702 GN=SEOB PE=1 SV=1)

HSP 1 Score: 541.576 bits (1394), Expect = 0.000e+0
Identity = 288/700 (41.14%), Postives = 432/700 (61.71%), Query Frame = 1 
Query:   34 TSDDSAMTKQVQATHAPDGRDIDVKPILQIVDEILVRFIARTVEGHDVRRDQDALEMTAALAEFDM---LDSLAYIINKISCELSCKCSGGGDAHSSTMVLLNYMSSYAWHAKVVLTLAAFSVIFGEFWLVAQLSTENTLAKSVALLKQLPDIAENFMSLKPHFEALIRLVKAAMDVTMCIVEFKELPSEYISEDTPPMSVASTHIPIASYWVIRSIVACASQIASLIGTRNESISSATEAWELSSLAHKVTSIYEHLKKQLHLCYQYIDDKRHVEAYHNLIRLFETVHVDNMKILRALIYAKDDILPLVDGTTKSRVSLEVLRRKHVLLLISDLDLSQEEILVLDNLYKDART-------RADTQYEMVWVPIVDKAVWNE---VNKQKFEYLQSLMAWFSVCDPFIIEPSAVKYIKEVWNFSKTAILVALDPQGRLSSPNAVHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPTVLEWMTEGKLICLYGGEDLEWIEKFTATALNVAKVGNLELEMAYVGKSN--AKERMQKMIKTFMSRKFSYFWPNVTSIWFFWTRLESMLYSKLLHGKTVENDEIMSEVMTVLSFDGSDRGWTIFCRGATEMARAKGDTAIE-CLSKFDEWGPRMDEEGGFVPAMNNYLN------TNKPPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCC 2067
            +SD+S M K +Q TH+PD R++ V+ +L +V++IL R    T++  D       L     L +  M   LDS++Y I++++CE++ K   G D+H  TM +  ++SS+ W  K+VLTLAAF++ +GEFWL+ Q  ++N LAKS+A+LK +P   +N ++L+   + L  L++    VT C+VE  ELP  YI+ D P +S   + IPIA YW IRS++AC SQI  +    +E +++  + WE S LA+K+ +I++HL + L LCY++I+ +R  E+   L  LF+T H+DNMKIL AL++ K  I PL DG TK +V L+VLRRK VLLLISDL++ Q+E+ + + +Y ++R        ++   YE+VWVP+VD     E   + ++KFE L+  M W+SV  P +IE   V++++  W+F    ILV +DPQG  +S NA+HMIWIWG  AFPFT  +EE LW++E +SL L+VDGID  +  W+     I LYGG+DL+WI +FT  A   AK  N+ LEMAYVGK N   +E+++++ +   S   S+ W     +WFFWTRLESMLYSK+  GK  ++D++M  +  +LS+D    GW +  +G   +  A G  AIE  +S +D          G+  AM+++ +      T KP  H +   +   +G IP+K+ C EC R MEKY  + CC
Sbjct:   37 SSDESMMLKLIQQTHSPDAREVQVRGLLSLVEDILDR---ATLDSEDTNASMLPLPTEDKLMQSSMMSVLDSVSYAIDRVACEIAYKSLTGSDSHEITMSVFEHLSSFQWDGKLVLTLAAFALNYGEFWLLVQFYSKNQLAKSLAMLKLVP--VQNRVTLESVSQGLNDLIREMKSVTACVVELSELPDRYITPDVPQLSRILSTIPIAVYWTIRSVIACISQINMITAMGHEMMNTQMDLWETSMLANKLKNIHDHLAETLRLCYRHIEKQRSSESLKVLHSLFDTTHIDNMKILTALVHPKPHITPLQDGLTKRKVHLDVLRRKTVLLLISDLNILQDELSIFEQIYTESRRNLVGVDGKSHMPYEVVWVPVVDPIEDFERSPILQKKFEDLRDPMPWYSVDSPKLIERHVVEFMRGRWHFMNKPILVVIDPQGNEASLNALHMIWIWGTEAFPFTRSREEELWRRETFSLNLIVDGIDSVIFNWIKPDNYIFLYGGDDLDWIRRFTMAAKATAKDSNVNLEMAYVGKRNHSHREQIRRISEVIRSENLSHSWAEPALMWFFWTRLESMLYSKIQLGKADDHDDVMQGIKKILSYDKLG-GWALLSKGPEIVMIAHG--AIERTMSVYDRTWKTHVPTKGYTKAMSDHHHDEVLRETGKPCGHFD-FHITARSGRIPEKMNCFECQRPMEKYMSFSCC 727
[Close]
BLAST of rna-KK1_031792 vs. DB:Swiss
Match: SEOA_ARATH (Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis thaliana OX=3702 GN=SEOA PE=1 SV=1)

HSP 1 Score: 468.389 bits (1204), Expect = 1.544e-153
Identity = 266/717 (37.10%), Postives = 406/717 (56.62%), Query Frame = 1 
Query:    7 QRKERRMFSTSDDSAMTKQVQATHAPDGRDIDVKPILQIVDEILVRFIARTVEGHDVRRDQDALEMTAAL---AEFDMLDSLAYIINKISCELSCKCSGGGDAH-------------SSTMVLLNYMSSYAWHAKVVLTLAAFSVIFGEFWLVAQLSTENTLAKSVALLKQLPDIAENFMSLKPHFEALIRLVKAAMDVTMCIVEFKELPSEYISEDTPPMSVASTHIPIASYWVIRSIVACASQIASLIGTRNESISSATEAWELSSLAHKVTSIYEHLKKQLHLCYQYIDDKRHVEAYHNLIRLFETV-HVDNMKILRALIYAKDDILPLVDGTTKSRVSLEVLRRKHVLLLISDLDLSQEEILVLDNLYKDARTRADTQYEMVWVPIVDKAVWNEVNKQKFEYLQSLMAWFSVCDPFIIEPSAVKYIKEVWNFSKTAILVALDPQGRLSSPNAVHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPTVLEWMTEGKLICLYGGEDLEWIEKFTATALNVAKVGNLELEMAYVGKSNAKERMQKMIKTFMSRKFSYFWPNVTSIWFFWTRLESMLYSKL----LHG-------KTVENDEIMSEVMTVLSFDGSDRGWTIFCRGATEMARAKGDTAIECLSKFDEWGPRMDEEGGFVPAMNNYLNTNKPPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE 2073
             R  R MFS SDD  M  +V  TH+PD    DV  +L +V++I         + H    D  A + +      A+    ++ A +I++ISCE+ CKC  GG++H             ++T  +L+ +S Y W AK+VL L+A +V +G F L+A+    N L KS+AL+KQLP I     +L    +    L++  +D+T  I++  +LP  +I+      +  + HIP A YW++R ++ C S I+   G + + I S  E  E+   + ++  I  +L +Q       I++    E Y  LI+ F T+ HVD +  L  L+   D  L    G +K RV + VL +KHVLLLISDL+  ++E+ +L++LY +A  ++   +E++WVP+ D   W E +  KFE L   M W+ + +P  +  +A+++++E W F    ILVALDP+G++ S NA  M+WIW   A PFT+ +E  LW ++ W+LE L+DG DP  L  + +GK ICLYGGED++WI+ FT+   NVAK  N++LEM YVGK N K  +Q +I T      S+  P++  IWFFWTR+ESM  SK      HG       K  E D ++ EV+ +L + G   GW +  + +  M RAKG+     L++F+EW   +  + GF+ A+N++L    PPHHC R +LP + G IP +V C EC R MEKY++Y+CC+E
Sbjct:  127 HRNGRPMFSLSDDRVMADRVLKTHSPDMIFFDVTSLLSVVNDIF--------KSHVPSIDSSAPKPSLVFKDYADHTSFETFADLIDQISCEIDCKCLHGGESHGMMTSGLHLDSRNTTTFSVLSLVSKYRWDAKLVLVLSALAVKYGVFLLLAETHATNQLTKSLALIKQLPSIFSRQNALHQRLDKTRILMQDMVDLTTTIIDIYQLPPNHIT------AAFTDHIPTAVYWIVRCVLICVSHISGASGFKQDQIMSFMEVSEIHENSERLRKINAYLLEQFKKSKMTIEEGIIEEEYQELIQTFTTIIHVDVVPPLLRLLRPID-FLYHGAGVSKRRVGINVLTQKHVLLLISDLENIEKELYILESLYTEAWQQS---FEILWVPVQD--FWTEADDAKFEALHMNMRWYVLGEPRKLRRAAIRFVREWWGFKNRPILVALDPKGQVMSTNAFPMVWIWQPFAHPFTTARERDLWSEQEWNLEFLIDGTDPHSLNQLVDGKYICLYGGEDMQWIKNFTSLWRNVAKAANIQLEMVYVGKRNPKNGIQPIINTIREENLSHTLPDLFQIWFFWTRVESMWESKQRMLKAHGIKGREGFKEEEKDLVLQEVVAMLGYGGEGDGWGLVSKASDMMVRAKGNLFSRGLAEFNEWEVNIPTK-GFLTALNDHLLMRLPPHHCTRFMLPETAGIIPNEVECTECRRTMEKYYLYQCCLE 822
[Close]
BLAST of rna-KK1_031792 vs. DB:Swiss
Match: SEOC_ARATH (Protein SIEVE ELEMENT OCCLUSION C OS=Arabidopsis thaliana OX=3702 GN=SEOC PE=4 SV=2)

HSP 1 Score: 308.145 bits (788), Expect = 6.995e-94
Identity = 211/696 (30.32%), Postives = 347/696 (49.86%), Query Frame = 1 
Query:   19 RRMFSTSDDSAMTKQVQATHAPDGRDIDVKPILQIVDEILVRFIARTVEGHDVRRDQDALEMTAALAEFDMLDSLAYIINKISCELSCKCSGGGDAHSSTMVLLNYMSSYAWHAKVVLTLAAFSVIFGEFWLVAQLSTENTLAKSVALLKQLPDIAENFMSLKPHFEALIRLVKAAMDVTMCIVEFKELPSEYISEDTPPMSVASTHIPIASYWVIRSIVACASQIASLIGTRNE----------SISSATEAWELSSLAHKVTSIYEHLKKQLHLCYQYIDDKRHVEAYHNLIRLFETVHVDNMKILRALIYAKDDILPLVDGTTKSRVSLEVLRRKHVLLLISDLDLSQEEILVLDNLYKD-ARTRADTQYEMVWVPIVDKAVWNEVNKQKFEYLQSLMAWFSVCDPFIIEPSAVKYIKEVWNFSKT-AILVALDPQGRLSSPNAVHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPTVLEWMTEGKLICLYGGEDLEWIEKFTATALNVAKVGNLELEMAYVGKSNAKERMQKMIKTFMSRKFSYFWPNVTSIWFFWTRLESMLYSKL--LHGKTVENDEIMSEVMTVLSFD-GSDRGWTIFCRGATEMARAKGDTAIECLSKFDEWGPRMDEEGGFVPAMNNYLNTNKPPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYR 2061
            RR  S  ++  + +Q+  +H PDGR +D + +LQ V+ IL  F+ +    +DV R          +  FD  ++L Y I +IS ++ C C+G  +    TMVL + +  Y W AK VL L   +  +G   L   L+  + +A S+A L QLP     F   +P  E+L  L+KA +DVT CI++F+++P +    D   +    ++I + +Y V++S + C  QI     T+            SI S   A ELSSL +++ +I+  L KQ+  C   I++    E    L  +    H DN  +L  L   +DD LPL   + +  +S+  ++ K  LLL+S   + +    +L  LY   + T  +  YE++WVPI     W +  K+ F++  + + W SV  P+++  + + + K+ W++    A+LV +D  GR  + NA+ M+ IWG  A+PF+  +E+ LWK+  WS+ LL+DGI PT      EG+ IC++G E+L+WI++F + A  +  +G  +LE+ Y+      ER        M      F P +  +  FW RLES+  SKL  +  +  + D +  EV  +L FD G  RGW I   G+T      G+   E + K   WG    +  GF  A+   +   KP    +  ++P       + V C +C   M+++  Y+
Sbjct:    4 RRDISALNEDIIVEQLLRSHDPDGRWLDSEMLLQEVETIL-SFVLQ----NDVSRPLLTENCITTIEVFDSKETLPYAIFRISVQMLCPCTGENEIRKRTMVLFDLLKEYRWDAKAVLVLGVLAATYGGLLLPVHLAICDPVAASIAKLNQLPIERTKF---RPWLESLNLLIKAMVDVTKCIIKFEKIPFKQAKLDNNILGETLSNIYLTTYRVVKSALTCMQQIPYFKQTQQAKKSRKTAAELSIESRRAAGELSSLGYQLLNIHTRLNKQVEDCSTQIEE----EINQRLRNINIETHQDNQDVLHLLFSLQDD-LPLQQYSRQ--ISITEVQDKVTLLLLSKPPV-EPLFFLLQQLYDHPSNTNTEQNYEIIWVPIPSSQKWTDEEKEIFDFYSNSLPWISVRQPWLMSSTILNFFKQEWHYKDNEAMLVVIDSNGRFVNMNAMDMVLIWGVKAYPFSVSREDELWKEHGWSINLLLDGIHPTF-----EGREICIFGSENLDWIDEFVSLARKIQNLG-FQLELIYLSNQRRDERA-------MEESSILFSPTLQQL--FWLRLESIERSKLKRIVIEPSKPDRVFEEVRNLLDFDYGKHRGWGIIGNGST-AETVDGEKMTERMRKIVRWG-EYAKGLGFTEAIE--IAAEKPCELSHTAVVPFEEALTMKVVTCEKCKWPMKRFVAYQ 664
The following BLAST results are available for this feature:
BLAST of rna-KK1_031792 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
SEOB_ARATH0.000e+041.14Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis t... [more]
SEOA_ARATH1.544e-15337.10Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis t... [more]
SEOC_ARATH6.995e-9430.32Protein SIEVE ELEMENT OCCLUSION C OS=Arabidopsis t... [more]
back to top
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027944Sieve element occlusion, C-terminalPFAMPF14577SEO_Ccoord: 459..689
e-value: 1.7E-101
score: 338.5
IPR027942Sieve element occlusion, N-terminalPFAMPF14576SEO_Ncoord: 13..297
e-value: 3.6E-121
score: 403.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-KK1_031792_Cc_Asha_v1.0 ID=rna-KK1_031792_Cc_Asha_v1.0; Name=rna-KK1_031792; organism=Cajanus cajan; type=mRNA; length=2076bp
ATGTCTCAAAGGAAGGAGCGACGCATGTTCTCAACTTCTGATGACAGTGC
CATGACCAAGCAAGTTCAGGCCACGCATGCACCTGATGGTCGTGATATTG
ATGTCAAACCAATCCTCCAAATCGTCGACGAAATCTTGGTTCGATTCATT
GCTCGCACTGTTGAGGGTCATGATGTAAGACGAGACCAAGATGCATTGGA
GATGACTGCTGCTCTGGCTGAATTTGACATGCTTGATTCGCTGGCTTATA
TCATAAACAAAATTTCCTGCGAGCTGTCATGCAAGTGCTCAGGAGGTGGC
GATGCACATTCATCAACAATGGTTTTACTGAATTACATGTCTAGCTATGC
ATGGCATGCGAAAGTTGTGCTAACCTTAGCAGCTTTTTCTGTTATTTTCG
GAGAGTTTTGGCTTGTTGCTCAGTTAAGTACTGAAAATACACTTGCCAAG
TCCGTGGCCCTCCTTAAGCAACTGCCAGACATTGCAGAGAATTTTATGTC
CTTGAAACCCCATTTTGAAGCACTCATTAGGCTCGTGAAAGCAGCAATGG
ATGTAACCATGTGCATTGTTGAATTCAAGGAGCTACCATCTGAATACATT
TCAGAGGACACACCTCCTATGTCTGTTGCCAGCACTCACATTCCTATTGC
TTCCTATTGGGTCATCCGAAGTATTGTGGCTTGTGCCTCACAAATTGCTA
GTCTCATAGGCACAAGAAATGAGTCCATTTCATCAGCCACAGAGGCATGG
GAATTATCCAGTCTGGCTCACAAAGTTACTAGTATATACGAGCACCTCAA
GAAGCAATTGCATCTTTGCTACCAATATATAGATGACAAGAGGCATGTTG
AGGCCTACCATAATCTGATACGCCTTTTCGAGACAGTGCATGTAGACAAC
ATGAAAATTCTGAGAGCACTGATATATGCAAAGGATGATATTCTTCCACT
TGTGGATGGAACTACAAAATCAAGGGTTAGCCTGGAGGTACTAAGGAGAA
AACATGTGTTGCTGCTCATATCAGATCTTGATCTTTCACAAGAAGAGATC
TTGGTGCTTGATAATTTATACAAAGATGCACGAACAAGGGCTGATACTCA
ATATGAGATGGTATGGGTCCCAATTGTGGACAAAGCGGTCTGGAATGAAG
TGAACAAACAGAAGTTTGAGTATTTGCAATCATTGATGGCATGGTTTAGT
GTGTGCGATCCTTTCATCATTGAACCATCGGCAGTTAAGTATATCAAAGA
AGTGTGGAACTTCTCAAAGACGGCTATTTTAGTGGCCCTTGATCCACAAG
GCAGATTGTCCTCCCCTAATGCTGTTCACATGATATGGATTTGGGGTAAT
TTGGCCTTCCCCTTCACAAGTGAGAAAGAAGAATCCTTGTGGAAGCAAGA
GATTTGGAGCCTTGAGCTACTTGTTGATGGCATTGATCCTACAGTTTTGG
AATGGATGACAGAGGGAAAACTGATATGCCTGTACGGAGGAGAAGACCTG
GAGTGGATAGAAAAATTCACAGCAACAGCCTTAAACGTGGCAAAAGTGGG
GAATTTGGAGCTAGAGATGGCTTACGTGGGAAAGAGCAACGCGAAGGAGC
GCATGCAGAAGATGATAAAAACCTTCATGTCACGAAAGTTCAGCTACTTC
TGGCCCAACGTGACGTCCATCTGGTTCTTCTGGACGCGTTTGGAGAGCAT
GCTGTACTCCAAGTTGCTGCACGGGAAGACGGTGGAGAACGACGAGATCA
TGAGCGAGGTCATGACGGTGCTGAGCTTCGACGGCAGCGACCGAGGCTGG
ACCATATTCTGCAGAGGCGCCACCGAAATGGCTCGAGCCAAGGGTGACAC
TGCTATCGAGTGTTTGTCCAAGTTTGATGAGTGGGGGCCTAGGATGGACG
AGGAAGGTGGCTTTGTGCCGGCGATGAATAATTACCTTAACACGAATAAG
CCACCGCATCACTGCAACAGGCTCATTCTTCCGGGGAGCACTGGGGGCAT
ACCGCAGAAGGTTGTGTGCGCTGAGTGTGGACGCCAGATGGAGAAGTACT
TCATGTATCGTTGTTGTGTTGAGTAA
back to top

protein sequence of rna-KK1_031792_Cc_Asha_v1.0

>rna-KK1_031792_Cc_Asha_v1.0 ID=rna-KK1_031792_Cc_Asha_v1.0; Name=rna-KK1_031792_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=691bp
MSQRKERRMFSTSDDSAMTKQVQATHAPDGRDIDVKPILQIVDEILVRFI
ARTVEGHDVRRDQDALEMTAALAEFDMLDSLAYIINKISCELSCKCSGGG
DAHSSTMVLLNYMSSYAWHAKVVLTLAAFSVIFGEFWLVAQLSTENTLAK
SVALLKQLPDIAENFMSLKPHFEALIRLVKAAMDVTMCIVEFKELPSEYI
SEDTPPMSVASTHIPIASYWVIRSIVACASQIASLIGTRNESISSATEAW
ELSSLAHKVTSIYEHLKKQLHLCYQYIDDKRHVEAYHNLIRLFETVHVDN
MKILRALIYAKDDILPLVDGTTKSRVSLEVLRRKHVLLLISDLDLSQEEI
LVLDNLYKDARTRADTQYEMVWVPIVDKAVWNEVNKQKFEYLQSLMAWFS
VCDPFIIEPSAVKYIKEVWNFSKTAILVALDPQGRLSSPNAVHMIWIWGN
LAFPFTSEKEESLWKQEIWSLELLVDGIDPTVLEWMTEGKLICLYGGEDL
EWIEKFTATALNVAKVGNLELEMAYVGKSNAKERMQKMIKTFMSRKFSYF
WPNVTSIWFFWTRLESMLYSKLLHGKTVENDEIMSEVMTVLSFDGSDRGW
TIFCRGATEMARAKGDTAIECLSKFDEWGPRMDEEGGFVPAMNNYLNTNK
PPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE
back to top

mRNA from alignment at Scaffold125850-KQ483552.1:371016..374411-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-KK1_031792_Cc_Asha_v1.0 ID=rna-KK1_031792_Cc_Asha_v1.0; Name=rna-KK1_031792; organism=Cajanus cajan; type=mRNA; length=3396bp; location=Sequence derived from: Scaffold125850-KQ483552.1:371016..374411- (Cajanus cajan
ATGTCTCAAAGGAAGGAGCGACGCATGTTCTCAACTTCTGATGACAGTGC
CATGACCAAGCAAGTTCAGGCCACGCATGCACCTGATGGTCGTGATATTG
ATGTCAAACCAATCCTCCAAATCGTCGACGAAATCTTGGTTCGATTCATT
GCTCGCACTGTTGAGGGTCATGATGTAAGACTCATTACATTTTAACTATG
CCACATTGCATGCATGTGCCCAATTAATGTTTAAACACTTTTTTTTTTTT
ATATTTTTTTTATAATATGAATAGGCTTATGTGTGTTTCATTTGGTAGGT
AAGACGAGACCAAGATGCATTGGAGATGACTGCTGCTCTGGCTGAATTTG
ACATGCTTGATTCGCTGGCTTATATCATAAACAAAATTTCCTGCGAGGTT
CTTTTCATATCATAATATCTTTACTTTTATAAAAGTTACTGTTATCTAGG
ATAAAATTTACTAAATGTGTCGCAGTGGAAAAGTGTGATTCCATTCCTTT
TTTAGTTCTGCGTAGAATATACTTGCTTTGGATTCATGTGCCATGGGGTT
GATATACATGTATCAATCTTACGCATTTTTTTGCAACTCTTTACGTCCAC
CTCACTCTTTTTGATGCGGATCTTTTTATCTCTTTCTTACATTACCATTG
ACATTTATTATTTTCATATTATTATTGTTGGAGTTAATCATCCTTATACT
AGTATAAGTGTAAAGTTTTTTATACCGACAATCAATCATATATTTTTTAA
AGTTATTTATTTTATTATTATTTTATTAAATAAGTAACTGACATATCACT
ATTAAAAGATATGATTAATTATCGATAAAAAAGACTTTATACTAATAATG
ATAGTATATAGGTAATTATCTATTATTCTTATTCACGTTCTTTTCCTTCC
TCGTCACTTTCATAAAAAATAAATTCTTCTTGGTTTTCTATTCATTTTTC
TTTCCTATCACACTATTTTGTCGCATTGATCACTTTCTCTCTCTTCCTTA
ATTTTTTCTTTTCTATCTCTGCTCTCTTTTAATCTCTACACTTTGGAGAC
TTATTCTTGAATATGTGAAATTATTCCTAGATCATTTTAATCAGAATTTT
ATTTCTACAAAGTCTAAAAAGTAAAAGGATCTAGATAAGTTATTAAGGAG
CAGTACCTGACTATATTGGCAGCTGTCATGCAAGTGCTCAGGAGGTGGCG
ATGCACATTCATCAACAATGGTTTTACTGAATTACATGTCTAGCTATGCA
TGGCATGCGAAAGTTGTGCTAACCTTAGCAGCTTTTTCTGTTATTTTCGG
AGAGTTTTGGCTTGTTGCTCAGTTAAGTACTGAAAATACACTTGCCAAGT
CCGTGGCCCTCCTTAAGCAACTGCCAGACATTGCAGAGAATTTTATGTCC
TTGAAACCCCATTTTGAAGCACTCATTAGGCTCGTGAAAGCAGCAATGGA
TGTAACCATGTGCATTGTTGAATTCAAGGAGCTACCATCTGAATACATTT
CAGAGGACACACCTCCTATGTCTGTTGCCAGCACTCACATTCCTATTGCT
TCCTATTGGGTCATCCGAAGTATTGTGGCTTGTGCCTCACAAATTGCTAG
TCTCATAGGCACAAGAAATGAGTAAGCATAGCTAGCCCCTTTTCATCACT
TACACCAAACTCAATTATTTTTTGAAATAGTAGTGACCCCCATTTTGTTG
ATTTCAGGTCCATTTCATCAGCCACAGAGGCATGGGAATTATCCAGTCTG
GCTCACAAAGTTACTAGTATATACGAGCACCTCAAGAAGCAATTGCATCT
TTGCTACCAATATATAGGTGGGTTTGCTATAGAAAATTATAATTAATTAG
TAACTTAATTAATTTGGATATAACCCGAACTCAAGATTCTTCATACAACA
TTGGACTAATTTAAAGGGTTTTGAATTTATCTAGAATGAAGCATACTTGA
CAATTGCAATCTTTGCAGATGACAAGAGGCATGTTGAGGCCTACCATAAT
CTGATACGCCTTTTCGAGACAGTGCATGTAGACAACATGAAAATTCTGAG
AGCACTGATATATGCAAAGGATGATATTCTTCCACTTGTGGATGGAACTA
CAAAATCAAGGGTATGATTTTAGTAACACGTAGTCCTAGTGTAACTAAAT
CATATTTCGTGCCTTGTTTTAAAACATTGACTTATTGACATACAGGTTAG
CCTGGAGGTACTAAGGAGAAAACATGTGTTGCTGCTCATATCAGATCTTG
ATCTTTCACAAGAAGAGATCTTGGTGCTTGATAATTTATACAAAGATGCA
CGAACAAGGGCTGATACTCAATATGAGATGGTATGGGTCCCAATTGTGGA
CAAAGCGGTCTGGAATGAAGTGAACAAACAGAAGTTTGAGTATTTGCAAT
CATTGATGGCATGGTTTAGTGTGTGCGATCCTTTCATCATTGAACCATCG
GCAGTTAAGTATATCAAAGAAGTGTGGAACTTCTCAAAGACGGCTATTTT
AGTGGCCCTTGATCCACAAGGCAGATTGTCCTCCCCTAATGCTGTTCACA
TGATATGGATTTGGGGTAATTTGGCCTTCCCCTTCACAAGTGAGAAAGAA
GAATCCTTGTGGAAGCAAGAGATTTGGAGCCTTGAGCTACTTGTTGATGG
CATTGATCCTACAGTTTTGGAATGGGTACGTAACAAATTAAAATACTAGC
TAGATATCTGCGTTTAATTTAATTTAATTTGTTACTTTTTGGAATATTAA
TTGTTCCCTCTCAAACATTGAACAGATGACAGAGGGAAAACTGATATGCC
TGTACGGAGGAGAAGACCTGGAGTGGATAGAAAAATTCACAGCAACAGCC
TTAAACGTGGCAAAAGTGGGGAATTTGGAGCTAGAGATGGCTTACGTGGG
AAAGAGCAACGCGAAGGAGCGCATGCAGAAGATGATAAAAACCTTCATGT
CACGAAAGTTCAGCTACTTCTGGCCCAACGTGACGTCCATCTGGTTCTTC
TGGACGCGTTTGGAGAGCATGCTGTACTCCAAGTTGCTGCACGGGAAGAC
GGTGGAGAACGACGAGATCATGAGCGAGGTCATGACGGTGCTGAGCTTCG
ACGGCAGCGACCGAGGCTGGACCATATTCTGCAGAGGCGCCACCGAAATG
GCTCGAGCCAAGGGTGACACTGCTATCGAGTGTTTGTCCAAGTTTGATGA
GTGGGGGCCTAGGATGGACGAGGAAGGTGGCTTTGTGCCGGCGATGAATA
ATTACCTTAACACGAATAAGCCACCGCATCACTGCAACAGGCTCATTCTT
CCGGGGAGCACTGGGGGCATACCGCAGAAGGTTGTGTGCGCTGAGTGTGG
ACGCCAGATGGAGAAGTACTTCATGTATCGTTGTTGTGTTGAGTAA
back to top

Coding sequence (CDS) from alignment at Scaffold125850-KQ483552.1:371016..374411-

>rna-KK1_031792_Cc_Asha_v1.0 ID=rna-KK1_031792_Cc_Asha_v1.0; Name=rna-KK1_031792; organism=Cajanus cajan; type=CDS; length=4152bp; location=Sequence derived from: Scaffold125850-KQ483552.1:371016..374411- (Cajanus cajan
ATGTCTCAAAGGAAGGAGCGACGCATGTTCTCAACTTCTGATGACAGTGC
CATGACCAAGCAAGTTCAGGCCACGCATGCACCTGATGGTCGTGATATTG
ATGTCAAACCAATCCTCCAAATCGTCGACGAAATCTTGGTTCGATTCATT
GCTCGCACTGTTGAGGGTCATGATATGTCTCAAAGGAAGGAGCGACGCAT
GTTCTCAACTTCTGATGACAGTGCCATGACCAAGCAAGTTCAGGCCACGC
ATGCACCTGATGGTCGTGATATTGATGTCAAACCAATCCTCCAAATCGTC
GACGAAATCTTGGTTCGATTCATTGCTCGCACTGTTGAGGGTCATGATGT
AAGACGAGACCAAGATGCATTGGAGATGACTGCTGCTCTGGCTGAATTTG
ACATGCTTGATTCGCTGGCTTATATCATAAACAAAATTTCCTGCGAGGTA
AGACGAGACCAAGATGCATTGGAGATGACTGCTGCTCTGGCTGAATTTGA
CATGCTTGATTCGCTGGCTTATATCATAAACAAAATTTCCTGCGAGCTGT
CATGCAAGTGCTCAGGAGGTGGCGATGCACATTCATCAACAATGGTTTTA
CTGAATTACATGTCTAGCTATGCATGGCATGCGAAAGTTGTGCTAACCTT
AGCAGCTTTTTCTGTTATTTTCGGAGAGTTTTGGCTTGTTGCTCAGTTAA
GTACTGAAAATACACTTGCCAAGTCCGTGGCCCTCCTTAAGCAACTGCCA
GACATTGCAGAGAATTTTATGTCCTTGAAACCCCATTTTGAAGCACTCAT
TAGGCTCGTGAAAGCAGCAATGGATGTAACCATGTGCATTGTTGAATTCA
AGGAGCTACCATCTGAATACATTTCAGAGGACACACCTCCTATGTCTGTT
GCCAGCACTCACATTCCTATTGCTTCCTATTGGGTCATCCGAAGTATTGT
GGCTTGTGCCTCACAAATTGCTAGTCTCATAGGCACAAGAAATGACTGTC
ATGCAAGTGCTCAGGAGGTGGCGATGCACATTCATCAACAATGGTTTTAC
TGAATTACATGTCTAGCTATGCATGGCATGCGAAAGTTGTGCTAACCTTA
GCAGCTTTTTCTGTTATTTTCGGAGAGTTTTGGCTTGTTGCTCAGTTAAG
TACTGAAAATACACTTGCCAAGTCCGTGGCCCTCCTTAAGCAACTGCCAG
ACATTGCAGAGAATTTTATGTCCTTGAAACCCCATTTTGAAGCACTCATT
AGGCTCGTGAAAGCAGCAATGGATGTAACCATGTGCATTGTTGAATTCAA
GGAGCTACCATCTGAATACATTTCAGAGGACACACCTCCTATGTCTGTTG
CCAGCACTCACATTCCTATTGCTTCCTATTGGGTCATCCGAAGTATTGTG
GCTTGTGCCTCACAAATTGCTAGTCTCATAGGCACAAGAAATGAGTCCAT
TTCATCAGCCACAGAGGCATGGGAATTATCCAGTCTGGCTCACAAAGTTA
CTAGTATATACGAGCACCTCAAGAAGCAATTGCATCTTTGCTACCAATAT
ATAGGTCCATTTCATCAGCCACAGAGGCATGGGAATTATCCAGTCTGGCT
CACAAAGTTACTAGTATATACGAGCACCTCAAGAAGCAATTGCATCTTTG
CTACCAATATATAGATGACAAGAGGCATGTTGAGGCCTACCATAATCTGA
TACGCCTTTTCGAGACAGTGCATGTAGACAACATGAAAATTCTGAGAGCA
CTGATATATGCAAAGGATGATATTCTTCCACTTGTGGATGGAACTACAAA
ATCAAGGATGACAAGAGGCATGTTGAGGCCTACCATAATCTGATACGCCT
TTTCGAGACAGTGCATGTAGACAACATGAAAATTCTGAGAGCACTGATAT
ATGCAAAGGATGATATTCTTCCACTTGTGGATGGAACTACAAAATCAAGG
GTTAGCCTGGAGGTACTAAGGAGAAAACATGTGTTGCTGCTCATATCAGA
TCTTGATCTTTCACAAGAAGAGATCTTGGTGCTTGATAATTTATACAAAG
ATGCACGAACAAGGGCTGATACTCAATATGAGATGGTATGGGTCCCAATT
GTGGACAAAGCGGTCTGGAATGAAGTGAACAAACAGAAGTTTGAGTATTT
GCAATCATTGATGGCATGGTTTAGTGTGTGCGATCCTTTCATCATTGAAC
CATCGGCAGTTAAGTATATCAAAGAAGTGTGGAACTTCTCAAAGACGGCT
ATTTTAGTGGCCCTTGATCCACAAGGCAGATTGTCCTCCCCTAATGCTGT
TCACATGATATGGATTTGGGGTAATTTGGCCTTCCCCTTCACAAGTGAGA
AAGAAGAATCCTTGTGGAAGCAAGAGATTTGGAGCCTTGAGCTACTTGTT
GATGGCATTGATCCTACAGTTTTGGAATGGGTTAGCCTGGAGGTACTAAG
GAGAAAACATGTGTTGCTGCTCATATCAGATCTTGATCTTTCACAAGAAG
AGATCTTGGTGCTTGATAATTTATACAAAGATGCACGAACAAGGGCTGAT
ACTCAATATGAGATGGTATGGGTCCCAATTGTGGACAAAGCGGTCTGGAA
TGAAGTGAACAAACAGAAGTTTGAGTATTTGCAATCATTGATGGCATGGT
TTAGTGTGTGCGATCCTTTCATCATTGAACCATCGGCAGTTAAGTATATC
AAAGAAGTGTGGAACTTCTCAAAGACGGCTATTTTAGTGGCCCTTGATCC
ACAAGGCAGATTGTCCTCCCCTAATGCTGTTCACATGATATGGATTTGGG
GTAATTTGGCCTTCCCCTTCACAAGTGAGAAAGAAGAATCCTTGTGGAAG
CAAGAGATTTGGAGCCTTGAGCTACTTGTTGATGGCATTGATCCTACAGT
TTTGGAATGGATGACAGAGGGAAAACTGATATGCCTGTACGGAGGAGAAG
ACCTGGAGTGGATAGAAAAATTCACAGCAACAGCCTTAAACGTGGCAAAA
GTGGGGAATTTGGAGCTAGAGATGGCTTACGTGGGAAAGAGCAACGCGAA
GGAGCGCATGCAGAAGATGATAAAAACCTTCATGTCACGAAAGTTCAGCT
ACTTCTGGCCCAACGTGACGTCCATCTGGTTCTTCTGGACGCGTTTGGAG
AGCATGCTGTACTCCAAGTTGCTGCACGGGAAGACGGTGGAGAACGACGA
GATCATGAGCGAGGTCATGACGGTGCTGAGCTTCGACGGCAGCGACCGAG
GCTGGACCATATTCTGCAGAGGCGCCACCGAAATGGCTCGAGCCAAGGGT
GACACTGCTATCGAGTGTTTGTCCAAGTTTGATGAGTGGGGGCCTAGGAT
GGACGAGGAAGGTGGCTTTGTGCCGGCGATGAATAATTACCTTAACACGA
ATAAGCCACCGCATCACTGCAACAGGCTCATTCTTCCGGGGAGCACTGGG
GGCATACCGCAGAAGGTTGTGTGCGCTGAGTGTGGACGCCAGATGGAGAA
GTACTTCATGTATCGTTGTTGTGTTGAGTAAATGACAGAGGGAAAACTGA
TATGCCTGTACGGAGGAGAAGACCTGGAGTGGATAGAAAAATTCACAGCA
ACAGCCTTAAACGTGGCAAAAGTGGGGAATTTGGAGCTAGAGATGGCTTA
CGTGGGAAAGAGCAACGCGAAGGAGCGCATGCAGAAGATGATAAAAACCT
TCATGTCACGAAAGTTCAGCTACTTCTGGCCCAACGTGACGTCCATCTGG
TTCTTCTGGACGCGTTTGGAGAGCATGCTGTACTCCAAGTTGCTGCACGG
GAAGACGGTGGAGAACGACGAGATCATGAGCGAGGTCATGACGGTGCTGA
GCTTCGACGGCAGCGACCGAGGCTGGACCATATTCTGCAGAGGCGCCACC
GAAATGGCTCGAGCCAAGGGTGACACTGCTATCGAGTGTTTGTCCAAGTT
TGATGAGTGGGGGCCTAGGATGGACGAGGAAGGTGGCTTTGTGCCGGCGA
TGAATAATTACCTTAACACGAATAAGCCACCGCATCACTGCAACAGGCTC
ATTCTTCCGGGGAGCACTGGGGGCATACCGCAGAAGGTTGTGTGCGCTGA
GTGTGGACGCCAGATGGAGAAGTACTTCATGTATCGTTGTTGTGTTGAGT
AA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR027944SEO_C
IPR027942SEO_N