rna-KK1_019893
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-KK1_019893 vs. DB:Swiss
Match: CDKG2_ORYSJ (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKG-2 PE=2 SV=2) HSP 1 Score: 376.711 bits (966), Expect = 7.361e-121 Identity = 175/220 (79.55%), Postives = 193/220 (87.73%), Query Frame = 1 Query: 1120 TSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFEQIDKIFRILGTPNETIWPGFSELPRVKVKFVKNQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEEALNHEWFREVPLPKSKEFMPTFPAQNAQDRRMRRILKSPDPLAEQHRKEMLQGESGTGGIFG 1779
TSNLLLNNRGELKICDFGL+RQYGSPLKPYT LVVTLWYRAPELLLGTK+YSTAIDMWS+GCIMAELL+KEPLFNGKTEFEQ+DKIFR LGTPNE IWPG+++LP VKV FVK YN LR KFPA SF+G P+LS++GFDLLN LLTYDPEKR++A+ AL HEWFREVPLPKSK+FMPTFPA N DRR +R LKSPDPL EQ KE LQG G G+FG
Sbjct: 492 TSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGTKEYSTAIDMWSVGCIMAELLAKEPLFNGKTEFEQLDKIFRTLGTPNEKIWPGYAKLPGVKVNFVKQPYNRLRDKFPAASFSGRPILSEAGFDLLNNLLTYDPEKRLSADAALQHEWFREVPLPKSKDFMPTFPALNELDRRTKRYLKSPDPLEEQRLKE-LQGNIGNRGLFG 710 HSP 2 Score: 112.464 bits (280), Expect = 1.191e-24 Identity = 130/410 (31.71%), Postives = 183/410 (44.63%), Query Frame = 1 Query: 1 MAAGRHGGYRENEFRDRESNFDVSRRVINDSSKQEYDRVRNGSHGVARGVSRDARDGIRLREKDIRVREAANXXXXXXXXXXXXXXXXXXXXXXXPKRCGFSVKAMDKEPGELXXXXXXXXXXXXXXQEKYCEXXXXXXXXXXQSLL-------ERKRKFSPIVWDQD-----EREVNLFKHRVVTADDES---------------------ESPVGLHSFVLDQRRGNEQEGKQP----ESEDYIPTRNISSSRWAAGDNSSSDEG---------EITDDKEILKRRK-LSPDLGMRIRNKVS------------RL-----EECKIEEFVGARAKXXXXXXXXXXXXXXXXDDHPSIDRG-TPDRLFPLQRAVNMLQGCRSVDEFERLNRIDEGTYGVVFRAKDKKSG 1035
MAAGRHGGYR+ E R+RE + + SRR S +Q++ +G H RG S D R EA S +G P R S + D+EPGE+ S S SDD + + E + G+S++ +KRKFSPI+WD+D +V K V + E +SP+ + V + QE + E E+Y RNIS+SRWA G N +EG D E+ +R+K LSP+LG + + +S RL E+ ++++ + S D + R TP+ + P R +NMLQGCRSVDEFERLN+I+EGTYGVV+RA+DKK+G
Sbjct: 1 MAAGRHGGYRDYEARERELDAEASRR----SKEQQHHHHPSGRH--QRGDS------------DPRC-EADRRRDGGRSRGGRELSNGYGHRRSPPPRSRLSARLGDREPGEVLSGSASDDSGGRPHRAR--ENGVSSSSRDGESVVAASASSPSKKRKFSPIIWDRDSPKPMHSDVAKGKKAVDSVPTELPLPPPPPLPPQDHIPERLAVEKSPMDVEPAVASESPEQLQEHAESRVMEEEEEYSTMRNISTSRWA-GANDDEEEGAPHRKKKSASPADSAELGQRKKALSPELGEVVASDISGGRTMSRSSDSGRLGADENEDLEVDKDDYMDVDRDDDGNSDIANHQSGMDSEYEVRRSETPEPVKPPHRCINMLQGCRSVDEFERLNKINEGTYGVVYRARDKKTG 388
BLAST of rna-KK1_019893 vs. DB:Swiss
Match: CDKG2_ORYSI (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. indica OX=39946 GN=CDKG-2 PE=3 SV=1) HSP 1 Score: 376.711 bits (966), Expect = 7.361e-121 Identity = 175/220 (79.55%), Postives = 193/220 (87.73%), Query Frame = 1 Query: 1120 TSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFEQIDKIFRILGTPNETIWPGFSELPRVKVKFVKNQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEEALNHEWFREVPLPKSKEFMPTFPAQNAQDRRMRRILKSPDPLAEQHRKEMLQGESGTGGIFG 1779
TSNLLLNNRGELKICDFGL+RQYGSPLKPYT LVVTLWYRAPELLLGTK+YSTAIDMWS+GCIMAELL+KEPLFNGKTEFEQ+DKIFR LGTPNE IWPG+++LP VKV FVK YN LR KFPA SF+G P+LS++GFDLLN LLTYDPEKR++A+ AL HEWFREVPLPKSK+FMPTFPA N DRR +R LKSPDPL EQ KE LQG G G+FG
Sbjct: 492 TSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGTKEYSTAIDMWSVGCIMAELLAKEPLFNGKTEFEQLDKIFRTLGTPNEKIWPGYAKLPGVKVNFVKQPYNRLRDKFPAASFSGRPILSEAGFDLLNNLLTYDPEKRLSADAALQHEWFREVPLPKSKDFMPTFPALNELDRRTKRYLKSPDPLEEQRLKE-LQGNIGNRGLFG 710 HSP 2 Score: 112.464 bits (280), Expect = 1.191e-24 Identity = 130/410 (31.71%), Postives = 183/410 (44.63%), Query Frame = 1 Query: 1 MAAGRHGGYRENEFRDRESNFDVSRRVINDSSKQEYDRVRNGSHGVARGVSRDARDGIRLREKDIRVREAANXXXXXXXXXXXXXXXXXXXXXXXPKRCGFSVKAMDKEPGELXXXXXXXXXXXXXXQEKYCEXXXXXXXXXXQSLL-------ERKRKFSPIVWDQD-----EREVNLFKHRVVTADDES---------------------ESPVGLHSFVLDQRRGNEQEGKQP----ESEDYIPTRNISSSRWAAGDNSSSDEG---------EITDDKEILKRRK-LSPDLGMRIRNKVS------------RL-----EECKIEEFVGARAKXXXXXXXXXXXXXXXXDDHPSIDRG-TPDRLFPLQRAVNMLQGCRSVDEFERLNRIDEGTYGVVFRAKDKKSG 1035
MAAGRHGGYR+ E R+RE + + SRR S +Q++ +G H RG S D R EA S +G P R S + D+EPGE+ S S SDD + + E + G+S++ +KRKFSPI+WD+D +V K V + E +SP+ + V + QE + E E+Y RNIS+SRWA G N +EG D E+ +R+K LSP+LG + + +S RL E+ ++++ + S D + R TP+ + P R +NMLQGCRSVDEFERLN+I+EGTYGVV+RA+DKK+G
Sbjct: 1 MAAGRHGGYRDYEARERELDAEASRR----SKEQQHHHHPSGRH--QRGDS------------DPRC-EADRRRDGGRSRGGRELSNGYGHRRSPPPRSRLSARLGDREPGEVLSGSASDDSGGRPHRAR--ENGVSSSSRDGESVVAASASSPSKKRKFSPIIWDRDSPKPMHSDVAKGKKAVDSVPTELPLPPPPPLPPQDHIPERLAVEKSPMDVEPAVASESPEQLQEHAESRVMEEEEEYSTMRNISTSRWA-GANDDEEEGAPHRKKKSASPADSAELGQRKKALSPELGEVVASDISGGRTMSRSSDSGRLGADENEDLEVDKDDYMDVDRDDDGNSDIANHQSGMDSEYEVRRSETPEPVKPPHRCINMLQGCRSVDEFERLNKINEGTYGVVYRARDKKTG 388
BLAST of rna-KK1_019893 vs. DB:Swiss
Match: CDKG1_ORYSJ (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKG-1 PE=2 SV=1) HSP 1 Score: 357.836 bits (917), Expect = 1.072e-113 Identity = 167/220 (75.91%), Postives = 189/220 (85.91%), Query Frame = 1 Query: 1120 TSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFEQIDKIFRILGTPNETIWPGFSELPRVKVKFVKNQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEEALNHEWFREVPLPKSKEFMPTFPAQNAQDRRMRRILKSPDPLAEQHRKEMLQGESGTGGIFG 1779
TSNLLLNNRGELKICDFGL+RQYGSPLKPYT LVVTLWYRAPELLLG K YSTAIDMWSLGCIM ELLSK PLFNGK+E +Q+DKIFR LGTP+E IWPG+S+LP VKF K +N LR KF A SFTG P+LS++GFDLLN+LLTYDPEKRI+AE+ALNHEWFRE+PLP+SK+FMPTFPA N QDRR ++ +KSPDPL EQ KE QG +G G+FG
Sbjct: 476 TSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLSKGPLFNGKSEIDQLDKIFRTLGTPDENIWPGYSKLPGATVKFGKQTHNRLRDKFRAVSFTGGPMLSEAGFDLLNRLLTYDPEKRISAEDALNHEWFRELPLPRSKDFMPTFPALNEQDRRFKKHMKSPDPLEEQRMKE--QGNNGDRGLFG 693 HSP 2 Score: 72.0182 bits (175), Expect = 7.554e-12 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 1 Query: 895 TPDRLFPLQRAVNMLQGCRSVDEFERLNRIDEGTYGVVFRAKDKKSG 1035
TP+ +R +NMLQGCRSVDEFERLN I+EGTYGVVFR +DK++G
Sbjct: 326 TPECTRSPRRCINMLQGCRSVDEFERLNTINEGTYGVVFRVRDKRTG 372
BLAST of rna-KK1_019893 vs. DB:Swiss
Match: CDKG1_ORYSI (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. indica OX=39946 GN=CDKG-1 PE=3 SV=1) HSP 1 Score: 356.295 bits (913), Expect = 3.320e-113 Identity = 167/220 (75.91%), Postives = 189/220 (85.91%), Query Frame = 1 Query: 1120 TSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFEQIDKIFRILGTPNETIWPGFSELPRVKVKFVKNQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEEALNHEWFREVPLPKSKEFMPTFPAQNAQDRRMRRILKSPDPLAEQHRKEMLQGESGTGGIFG 1779
TSNLLLNNRGELKICDFGL+RQYGSPLKPYT LVVTLWYRAPELLLG K YSTAIDMWSLGCIM ELLSK PLFNGK+E +Q+DKIFR LGTP+E IWPG+S+LP VKF K +N LR KF A SFTG P+LS++GFDLLN+LLTYDPEKRI+AE+ALNHEWFRE+PLP+SK+FMPTFPA N QDRR ++ +KSPDPL EQ KE QG +G G+FG
Sbjct: 476 TSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLSKGPLFNGKSEIDQLDKIFRTLGTPDENIWPGYSKLPGATVKFGKQTHNRLRDKFRAVSFTGGPMLSEAGFDLLNRLLTYDPEKRISAEDALNHEWFRELPLPRSKDFMPTFPALNEQDRRFKKHMKSPDPLEEQWMKE--QGNNGDRGLFG 693 HSP 2 Score: 72.0182 bits (175), Expect = 8.168e-12 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 1 Query: 895 TPDRLFPLQRAVNMLQGCRSVDEFERLNRIDEGTYGVVFRAKDKKSG 1035
TP+ +R +NMLQGCRSVDEFERLN I+EGTYGVVFR +DK++G
Sbjct: 326 TPECTRSPRRCINMLQGCRSVDEFERLNTINEGTYGVVFRVRDKRTG 372
BLAST of rna-KK1_019893 vs. DB:Swiss
Match: CDKG1_ARATH (Cyclin-dependent kinase G1 OS=Arabidopsis thaliana OX=3702 GN=CDKG1 PE=1 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 3.476e-91 Identity = 130/182 (71.43%), Postives = 152/182 (83.52%), Query Frame = 1 Query: 1123 SNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFEQIDKIFRILGTPNETIWPGFSELPRVKVKFVKNQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEEALNHEWFREVPLPKSKEFMPTFPAQ 1668
SNLL+NN GELKICDFG+ARQYGSP+KPYT +V+T WYR PELLLG K+YSTA+DMWS+GCIMAELLS++PLF GK+E +Q+ KIF +LGTPNE IWPGFS P K KF YN+LRKKFPA SF G +LS+ GFDLLN LLT DPEKR+T E+ALNH WF EVPLPKSK+FMPT+P +
Sbjct: 430 SNLLMNNCGELKICDFGMARQYGSPIKPYTQMVITQWYRPPELLLGAKEYSTAVDMWSVGCIMAELLSQKPLFPGKSELDQLQKIFAVLGTPNEAIWPGFSSFPNAKAKFPTQPYNMLRKKFPAISFVGGQILSERGFDLLNSLLTLDPEKRLTVEDALNHGWFHEVPLPKSKDFMPTYPPK 611 HSP 2 Score: 59.6918 bits (143), Expect = 4.786e-8 Identity = 44/143 (30.77%), Postives = 72/143 (50.35%), Query Frame = 1 Query: 610 ESEDYIPTRNISSSRWAAGDNSSSDEGEITDDKEI--LKRRKLSPDLGMRIRNKVSRLEECKIEEFVGARAKXXXXXXXXXXXXXXXXDDHPSIDRGTPDRLFPLQRAVNMLQGCRSVDEFERLNRIDEGTYGVVFRAKDKKS 1032
E E + NI +SRW G S +E + + R L+P+ + VS ++C + G+ GR DH ++ D L P + +NM+ G RSV+EF++LN+I+EGTYG+V++A+D+K+
Sbjct: 182 EEEQVMQEPNIKTSRWGTGLTSPKEELISVNVSKTNRWNRSSLTPECEEVM---VSEEQQCYSSGSGSGHLSVEKLSADGNSGREYYSSDHDELEHEDQDSLTPGE--MNMMFGSRSVNEFQKLNKINEGTYGIVYKARDEKT 319
BLAST of rna-KK1_019893 vs. DB:Swiss
Match: CD11B_HUMAN (Cyclin-dependent kinase 11B OS=Homo sapiens OX=9606 GN=CDK11B PE=1 SV=4) HSP 1 Score: 246.514 bits (628), Expect = 8.297e-71 Identity = 118/192 (61.46%), Postives = 149/192 (77.60%), Query Frame = 1 Query: 1120 TSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFEQIDKIFRILGTPNETIWPGFSELPRV-KVKFVKNQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEEALNHEWFREVPLPKSKEFMPTFPAQNAQDRRMR 1692
TSNLLL++ G LK+ DFGLAR+YGSPLK YT +VVTLWYRAPELLLG K+YSTA+DMWS+GCI ELL+++PLF GK+E +QI+K+F+ LGTP+E IWPG+SELP V K+ F ++ YN LRK+F A +LSD GFDL+NK LTY P +RI+AE+ L HE+FRE PLP PT+PA++ Q R R
Sbjct: 565 TSNLLLSHAGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGKSEIDQINKVFKDLGTPSEKIWPGYSELPAVKKMTFSEHPYNNLRKRFGA-------LLSDQGFDLMNKFLTYFPGRRISAEDGLKHEYFRETPLPIDPSMFPTWPAKSEQQRVKR 749
BLAST of rna-KK1_019893 vs. DB:Swiss
Match: CD11B_RAT (Cyclin-dependent kinase 11B OS=Rattus norvegicus OX=10116 GN=Cdk11b PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 1.388e-69 Identity = 119/200 (59.50%), Postives = 147/200 (73.50%), Query Frame = 1 Query: 1120 TSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFEQIDKIFRILGTPNETIWPGFSELPRV-KVKFVKNQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEEALNHEWFREVPLPKSKEFMPTFPAQNAQDRRMRRILKSPDP 1716
TSNLLL + G LK+ DFGLAR+YGSPLK YT +VVTLWYRAPELLLG K+YSTA DMWS+GCI ELL+++PLF GK++ +QI+KIF+ +GTP+E IWPG+SELP V K+ F + YN LRK+F A +LSD GFDL+NK LTY P +RI AE+ L HE+FRE PLP PT+PA++ Q R SP P
Sbjct: 206 TSNLLLTHAGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTACDMWSVGCIFGELLTQKPLFPGKSDIDQINKIFKDIGTPSEKIWPGYSELPAVKKMTFSELPYNNLRKRFGA-------LLSDQGFDLMNKFLTYYPGRRINAEDGLKHEYFRETPLPIDPSMFPTWPAKSEQQCVKRGT--SPKP 396 HSP 2 Score: 61.2326 bits (147), Expect = 1.355e-8 Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 1 Query: 916 LQRAVNMLQGCRSVDEFERLNRIDEGTYGVVFRAKDKKS 1032
L + + LQGCRSV+EF+ LNRI+EGTYGVV+RAKDKK+
Sbjct: 63 LPKYLPALQGCRSVEEFQCLNRIEEGTYGVVYRAKDKKT 101
BLAST of rna-KK1_019893 vs. DB:Swiss
Match: CD11B_MOUSE (Cyclin-dependent kinase 11B OS=Mus musculus OX=10090 GN=Cdk11b PE=1 SV=2) HSP 1 Score: 241.891 bits (616), Expect = 4.409e-69 Identity = 116/192 (60.42%), Postives = 147/192 (76.56%), Query Frame = 1 Query: 1120 TSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFEQIDKIFRILGTPNETIWPGFSELPRV-KVKFVKNQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEEALNHEWFREVPLPKSKEFMPTFPAQNAQDRRMR 1692
TSNLLL++ G LK+ DFGLAR+YGSPLK YT +VVTLWYRAPELLLG K+YSTA+DMWS+GCI ELL+++PLF GK++ +QI+KIF+ LGTP+E IWPG+++LP V K+ F + YN LRK+F A +LSD GFDL+NK LTY P +RI AE+ L HE+FRE PLP PT+PA++ Q R R
Sbjct: 554 TSNLLLSHAGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGKSDIDQINKIFKDLGTPSEKIWPGYNDLPAVKKMTFSEYPYNNLRKRFGA-------LLSDQGFDLMNKFLTYYPGRRINAEDGLKHEYFRETPLPIDPSMFPTWPAKSEQQRVKR 738 HSP 2 Score: 60.4622 bits (145), Expect = 3.616e-8 Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 1 Query: 916 LQRAVNMLQGCRSVDEFERLNRIDEGTYGVVFRAKDKKS 1032
L + + LQGCRSV+EF+ LNRI+EGTYGVV+RAKDKK+
Sbjct: 411 LPKYLPALQGCRSVEEFQCLNRIEEGTYGVVYRAKDKKT 449
BLAST of rna-KK1_019893 vs. DB:Swiss
Match: CD11A_HUMAN (Cyclin-dependent kinase 11A OS=Homo sapiens OX=9606 GN=CDK11A PE=1 SV=4) HSP 1 Score: 241.121 bits (614), Expect = 8.756e-69 Identity = 116/192 (60.42%), Postives = 147/192 (76.56%), Query Frame = 1 Query: 1120 TSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFEQIDKIFRILGTPNETIWPGFSELPRV-KVKFVKNQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEEALNHEWFREVPLPKSKEFMPTFPAQNAQDRRMR 1692
TSNLLL++ G LK+ DFGLAR+YGSPLK YT +VVT WYRAPELLLG K+YSTA+DMWS+GCI ELL+++PLF G +E +QI+K+F+ LGTP+E IWPG+SELP V K+ F ++ YN LRK+F A +LSD GFDL+NK LTY P +RI+AE+ L HE+FRE PLP PT+PA++ Q R R
Sbjct: 553 TSNLLLSHAGILKVGDFGLAREYGSPLKAYTPVVVTQWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGNSEIDQINKVFKELGTPSEKIWPGYSELPVVKKMTFSEHPYNNLRKRFGA-------LLSDQGFDLMNKFLTYFPGRRISAEDGLKHEYFRETPLPIDPSMFPTWPAKSEQQRVKR 737
BLAST of rna-KK1_019893 vs. DB:Swiss
Match: CD111_CAEEL (Cyclin-dependent kinase 11.1 OS=Caenorhabditis elegans OX=6239 GN=cdk-11.1 PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 2.089e-58 Identity = 109/189 (57.67%), Postives = 139/189 (73.54%), Query Frame = 1 Query: 1120 TSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFEQIDKIFRILGTPNETIWPGFSELPRVK-VKFVKNQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEEALNHEWFREVPLPKSKEFMPTFPAQNAQDR 1683
TSNLL++++G LKI DFGLAR+YG PLK +T +VVTLWYR+PELLLGT+ YST +DMWS+GCIMAE + +PLF G+ E EQI KIF +GTP E+IWPG +EL K + F K YN LRK+F A +L+D+GF LLN LLT DP+ R +A +AL+HEWF E P P E PTFPA++ Q++
Sbjct: 487 TSNLLMSHKGILKIADFGLAREYGDPLKKFTSIVVTLWYRSPELLLGTRLYSTPVDMWSVGCIMAEFILLKPLFPGRGELEQIKKIFMEMGTPTESIWPGVTELDGWKALTFEKYPYNQLRKRFLAGR-----LLNDTGFKLLNGLLTLDPKNRFSATQALDHEWFTEEPYPVPPEEFPTFPAKSEQNK 670 The following BLAST results are available for this feature:
BLAST of rna-KK1_019893 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-KK1_019893_Cc_Asha_v1.0 ID=rna-KK1_019893_Cc_Asha_v1.0; Name=rna-KK1_019893; organism=Cajanus cajan; type=mRNA; length=1782bpback to top protein sequence of rna-KK1_019893_Cc_Asha_v1.0 >rna-KK1_019893_Cc_Asha_v1.0 ID=rna-KK1_019893_Cc_Asha_v1.0; Name=rna-KK1_019893_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=593bpback to top mRNA from alignment at Chr_1-CM003603.1:1599872..1603025- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-KK1_019893_Cc_Asha_v1.0 ID=rna-KK1_019893_Cc_Asha_v1.0; Name=rna-KK1_019893; organism=Cajanus cajan; type=mRNA; length=3154bp; location=Sequence derived from: Chr_1-CM003603.1:1599872..1603025- (Cajanus cajanback to top Coding sequence (CDS) from alignment at Chr_1-CM003603.1:1599872..1603025- >rna-KK1_019893_Cc_Asha_v1.0 ID=rna-KK1_019893_Cc_Asha_v1.0; Name=rna-KK1_019893; organism=Cajanus cajan; type=CDS; length=3564bp; location=Sequence derived from: Chr_1-CM003603.1:1599872..1603025- (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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