rna-KK1_019914

Transcript Overview


Name	rna-KK1_019914
Unique Name	rna-KK1_019914_Cc_Asha_v1.0
Type	mRNA
Organism	Cajanus cajan (pigeon pea)
Sequence length	690
Product	hypothetical protein

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_1-CM003603.1	supercontig	Chr_1-CM003603.1:1743178..1747066 +	Cajanus cajan Asha genome v1.0	n/a
Chr_1-CM003603.1	supercontig	Chr_1-CM003603.1:1743178..1747066 +	Cajanus cajan Asha genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cajanus cajan Asha genome v1.0	2019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot	2019-10-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
cccrR0011	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
cccrR0028	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ccpsR022	Pisum sativum Cameor genome v1a	Pisum sativum
ccpsR024	Pisum sativum Cameor genome v1a	Pisum sativum
ccpsR033	Pisum sativum Cameor genome v1a	Pisum sativum
ccccR001	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccpvR0004	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccpvR0019	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccpvR0036	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccvuR0003	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
ccvuR0016	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
caiccL0518	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caccL0156	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
caccL0552	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
caccL0729	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
anccL0256	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0379	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0433	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0833	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0912	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
asccL0009	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
asccL0662	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
cctifR0008	Vicia faba cv. Tiffany genome v1.0	Vicia faba
cctifR0010	Vicia faba cv. Tiffany genome v1.0	Vicia faba
ccvfhR0008	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccvfhR0010	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccvrvR0014	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccvrvR0038	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccvssR0010	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccvuaR0003	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
ccvssR0042	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccvuaR0020	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
canccL0154	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canccL0553	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
carccL0160		Cicer arietinum
carccL0594		Cicer arietinum
ccccaR0000	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccccaR0054	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccvumR0009	Vigna umbellata FF25 genome v1.0	Vigna umbellata
ccvumR0042	Vigna umbellata FF25 genome v1.0	Vigna umbellata

Orthologs


Gene/Transcript	Assembly	Species
rna-XM_014663607.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Vigun01g244000.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
rna-XM_004502278.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
Vum_04G03195.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Phvul.001G258300.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Cr_13049.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
Ca_13740.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
rna-TanjilR_11013	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Vfaba.Hedin2.R1.2g113320.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
jg53602.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
LR48_mrnaVigan03g312600	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Vfaba.Tiffany.R1.2g093000.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
Ca_11312	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
evm.model.Chr01.2297	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Psat5g093920.1	Pisum sativum Cameor genome v1a	Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Cc_v2.0_00126.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-KK1_019914	gene-KK1_019914_Cc_Asha_v1.0	Cajanus cajan	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-KK1_019914	rna-KK1_019914_Cc_Asha_v1.0-protein	Cajanus cajan	polypeptide
rna-KK1_019914_Cc_Asha_v1.0	rna-KK1_019914_Cc_Asha_v1.0	Cajanus cajan	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1743178..1743447	rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1743178..1743447	Cajanus cajan	exon
rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1743178..1743447	rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1743178..1743447	Cajanus cajan	exon
rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1743560..1743697	rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1743560..1743697	Cajanus cajan	exon
rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1743560..1743697	rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1743560..1743697	Cajanus cajan	exon
rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1746269..1746355	rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1746269..1746355	Cajanus cajan	exon
rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1746269..1746355	rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1746269..1746355	Cajanus cajan	exon
rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1746537..1746584	rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1746537..1746584	Cajanus cajan	exon
rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1746537..1746584	rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1746537..1746584	Cajanus cajan	exon
rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1746920..1747066	rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1746920..1747066	Cajanus cajan	exon
rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1746920..1747066	rna-KK1_019914_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1746920..1747066	Cajanus cajan	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1743178..1743447	rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1743178..1743447	Cajanus cajan	CDS
rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1743178..1743447	rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1743178..1743447	Cajanus cajan	CDS
rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1743560..1743697	rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1743560..1743697	Cajanus cajan	CDS
rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1743560..1743697	rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1743560..1743697	Cajanus cajan	CDS
rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1746269..1746355	rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1746269..1746355	Cajanus cajan	CDS
rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1746269..1746355	rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1746269..1746355	Cajanus cajan	CDS
rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1746537..1746584	rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1746537..1746584	Cajanus cajan	CDS
rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1746537..1746584	rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1746537..1746584	Cajanus cajan	CDS
rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1746920..1747066	rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1746920..1747066	Cajanus cajan	CDS
rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1746920..1747066	rna-KK1_019914_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1746920..1747066	Cajanus cajan	CDS

Homology

[Close]

BLAST of rna-KK1_019914 vs. DB:Swiss
Match: HHL1_ARATH (Protein HHL1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HHL1 PE=1 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 2.600e-123
Identity = 171/231 (74.03%), Postives = 199/231 (86.15%), Query Frame = 1

Query:    1 MEVAMSLNALVRLPL-SSSRFHDEAPARHSLFSSRTR-RSCKAPPPRHVLVVEAKGKKGMMSRQFQRSAPPPLPKLEDDGNPKFVIFIRMANVYLWYPLSIVTGGTTAKIMVAAKDNFLGKYIYKDTLDRNLAAVIYRDEKEVQKSAFKQYRVLRSATDFRYGYKLVENGNIRAALSTTDVIELPTEDQLKTVLDKVKDFFGDAKESFGKITSLGTTATEDSDEDTKEKAK 687
            MEV+MSLNAL RLPL ++ RF +   ARHSLFSSRT  R       R V VVEAKGKKGM +RQ+QR+ PPP+PK+EDDGNP+FVIFIRMANVYLWYPLSI+ GGTTAKIMVAAKDN LGKYIYKDT+ RN+AAVIYRDEKE+QK+A KQ+RVLR+AT+FRYGYKLVENGN+RAALST+DVIELPT+DQLKTV DKVKD+FGDAKESFGK++SL   + E ++E + EKAK
Sbjct:    1 MEVSMSLNALTRLPLKNTGRFEEVGLARHSLFSSRTACRETAVQQRRMVFVVEAKGKKGMAARQYQRT-PPPMPKIEDDGNPRFVIFIRMANVYLWYPLSIIAGGTTAKIMVAAKDNLLGKYIYKDTIARNIAAVIYRDEKEIQKTAIKQHRVLRTATEFRYGYKLVENGNMRAALSTSDVIELPTQDQLKTVFDKVKDYFGDAKESFGKLSSLNPGSDEKTEETSDEKAK 230

The following BLAST results are available for this feature:

BLAST of rna-KK1_019914 vs. DB:Swiss

BLAST of rna-KK1_019914 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
HHL1_ARATH	2.600e-123	74.03	Protein HHL1, chloroplastic OS=Arabidopsis thalian...	[more]

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_1-CM003603.1:1743178..1747066+
coding sequence from alignment at Chr_1-CM003603.1:1743178..1747066+

mRNA sequence

>rna-KK1_019914_Cc_Asha_v1.0 ID=rna-KK1_019914_Cc_Asha_v1.0; Name=rna-KK1_019914; organism=Cajanus cajan; type=mRNA; length=690bp
ATGGAAGTAGCAATGTCTCTGAACGCGCTCGTTCGTCTTCCTCTCTCGAG
TTCGCGCTTCCACGACGAGGCTCCGGCGAGACACTCTCTGTTTTCGAGCC
GCACGCGGCGGAGTTGCAAGGCTCCGCCACCGCGGCACGTGCTGGTGGTG
GAAGCCAAGGGCAAAAAGGGAATGATGTCTCGTCAATTCCAGCGCTCCGC
ACCTCCTCCTTTGCCCAAACTCGAAGACGATGGGAATCCCAAATTCGTTA
TCTTCATTCGCATGGCCAATGTATACCTTTGGTACCCTCTTAGCATCGTA
ACAGGTGGCACCACTGCTAAAATCATGGTTGCGGCTAAAGATAATTTCCT
GGGCAAGTATATTTATAAAGACACCCTTGATAGAAATCTCGCCGCTGTTA
TCTACCGGGATGAGAAGGAGGTACAGAAATCTGCTTTCAAACAGTACCGT
GTATTACGATCAGCTACTGATTTCAGATACGGCTACAAACTTGTTGAAAA
TGGCAATATAAGAGCTGCTCTTTCTACCACTGACGTTATTGAGCTCCCAA
CCGAAGATCAACTAAAAACCGTTCTTGATAAAGTGAAAGACTTTTTCGGA
GACGCAAAGGAATCTTTTGGGAAGATAACATCATTGGGCACTACTGCAAC
GGAGGATTCAGACGAAGATACAAAAGAAAAAGCCAAGTGA

protein sequence of rna-KK1_019914_Cc_Asha_v1.0

>rna-KK1_019914_Cc_Asha_v1.0 ID=rna-KK1_019914_Cc_Asha_v1.0; Name=rna-KK1_019914_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=229bp
MEVAMSLNALVRLPLSSSRFHDEAPARHSLFSSRTRRSCKAPPPRHVLVV
EAKGKKGMMSRQFQRSAPPPLPKLEDDGNPKFVIFIRMANVYLWYPLSIV
TGGTTAKIMVAAKDNFLGKYIYKDTLDRNLAAVIYRDEKEVQKSAFKQYR
VLRSATDFRYGYKLVENGNIRAALSTTDVIELPTEDQLKTVLDKVKDFFG
DAKESFGKITSLGTTATEDSDEDTKEKAK

mRNA from alignment at Chr_1-CM003603.1:1743178..1747066+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-KK1_019914_Cc_Asha_v1.0 ID=rna-KK1_019914_Cc_Asha_v1.0; Name=rna-KK1_019914; organism=Cajanus cajan; type=mRNA; length=3889bp; location=Sequence derived from: Chr_1-CM003603.1:1743178..1747066+ (Cajanus cajan
ATGGAAGTAGCAATGTCTCTGAACGCGCTCGTTCGTCTTCCTCTCTCGAG
TTCGCGCTTCCACGACGAGGCTCCGGCGAGACACTCTCTGTTTTCGAGCC
GCACGCGGCGGAGTTGCAAGGCTCCGCCACCGCGGCACGTGCTGGTGGTG
GAAGCCAAGGGCAAAAAGGGAATGATGTCTCGTCAATTCCAGCGCTCCGC
ACCTCCTCCTTTGCCCAAACTCGAAGACGATGGGAATCCCAAATTCGTTA
TCTTCATTCGCATGGCCAATGTAATCAATCATTAAATACCATAtcctttc
ttaattttttttattaatttataattgtaattatattttgttatgattat
tttttctcaaattaccTATTCTAACCTTGCAGGTATACCTTTGGTACCCT
CTTAGCATCGTAACAGGTGGCACCACTGCTAAAATCATGGTTGCGGCTAA
AGATAATTTCCTGGGcaagtatatttataaagacACCCTTGATAGAAATC
TCGCCGCTGTTATCTACCGGGTAAGATTTTTCCCCATTTTATATTGCTGC
TGCTATATAATACTATTAgctttaaattaatgtttctaTGATTTAAGTGC
TGCATGCTATTTTTGTCTACCTCACTTGTTATGTTGATAAgcttgtttta
tattttatttttgtgttttattgtATTGGTGCGAGAGGCAACTTATATGA
TGATCGATGATGATATTGATAATGGGAGAagcgttttttttttcttagtg
aaattgaaaagaaaaaaaaaaaaaaaaaaNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagagga
aaaaagggGCATTCCGAGAATTGAACTCGGGACCTCTCGCACCCTAAGCG
AGAATCATACCACTAGACCAAATGCCCACCATCATTTGGTAGTACGTGCT
GTTTGGAGAATTGAATTCATATAAGTAGTATTCTGTTCTTGTCTCCCTTT
TTTTGGGTGAAATGTTTTTGTCTCCGTATTATGTTGACTAGTCGAGATAC
TTCGTTACACAGATAAAATATTAGATAGTCATCCGTGATTATTCAGAAAG
AAtatgagaaattattttttttcgaCGTGTAGAGAGATATAATGGGTCAc
taaaaaatggaaataaaaaacaGTTACATAcactaatatctttttttata
ataagtatagataagtgtgatattttatttgttttattgcaATGGTACCA
GAGGCAATTAAAGTAATATGATAATGAAATGAAGCCATGTTTTCTTCCaa
tgaatttgattaaaaaaaaggagaaagggGCATTATGAGAAATGAACTCG
GAGCCTCTCGAACACTAAGCGAGAATCATACCACTAGACCAAATGTCCAG
CATCTATTAAATGAATTGTTATAACAATGTGAAGCATTTTCTGAATGGAA
TATGTGCTGCCTGTATAAAATTTACTACTGTCATCTTAAAAACGAATAAT
GCTTGGTTTGTGTTGGCATCAACCACAACATATTACATGTATTTGATATA
TCTGTGTGAGATTGACAGAACTAGATTGCGTTTGGCTGTTTGCAAAATTG
ATTTTGgttaaacttgattttgaaatgaaatgacATGATTAATGCTTAAA
GGGAGTTAGCAGTAAAACGCTGTATAAAACTTTTGATGCAATGCAAAAGG
TACTTATAGTTGTTCCAATTCGAATCAACTTTGGACTTATAACCAATTCC
TCAATGTGAAACTAAACATGTGAACATTTATCTAAAATCACATTTAGTTA
ATATTTCAATGTGATTTTAGATGATCCAAAATGAATCCAAACGTTCACCA
AGTATATGGGTGTGTAGGAAACAAGATGAGACCAGCTGTGCAGATGAGGC
GATGTGTTTGGATGACATTATTCTTTAACAATtgatgtgttgtgttgtga
gtCCTATATTACCATATTTGGATATTTATTCAACAAGGATTTATCACAGG
AGAATTTATTCATTAGCATGATCTCAAAGTTTACTAAAAtaagctataaa
aaaaatttatttggcaaaaaaattcactttaaaaTTCATCGAAATAAACT
GAAAATAGTAAAATCATAAGCGGCTTTCATATGCCCAAATAAGCTCTTTG
TAAGTTCTTCCAAGTTCCAAACATGCTAGAGATCTATCGTAATCACTATA
TTGTGGGTGTGCTTTATCAGTTATGCATACCGAGTGTGCTTTTTTCCACA
TTTTCTATCCGTGTGCTAGTGTTACtgctatataatattaatttgaagcC
ATAAAGAAGAATTTATTTAAGCACATGCTACGTCTGTCTCCCCATTATGT
TGATAAGTGtgctttatattttaatcttgtGTTTTATTGCATTGGCTAGA
CTTCAGAGACAACTAATATGTCAATACTTAATAGTTAATAGAATaagata
catatttttttaatgaaaatgaaaggaaaaaaaaatggggcATTCCGAGA
ATTGAACTCGGGACCTCTCGCACCCTAAGCGAGAATCATACCACTAGACC
AAATGCCCACCTTGGTTTTAACAGATTTTGCTGcctttataaaaatgaat
aatacttGGTTTGTCTTAGGATCTTGCACAACACGTCACATCTATATCTA
TGTGAGATGGCAGAATTAGTGTTGGGTGTGTGGGAAATGAGGTGAGACCA
ACTGCACAGATGAGGAGATATGTTCTTAAACAATTGATGTTTGTTGAGTC
CTTTATTCAACAAGGATTTATCACGAGAGCTCATTCATAAACATGATCCT
GAAGCTTACTAAAATTCGCCAAACAAggtttattttgttaaatttcacTG
TAAAACtcattgaaataaattaaaagagccAATAGTATGGTCATAAGCTA
CTGTCATGTCCAAATAGGCTCTAAGTTCTCCCAAACACACTAGAGATGTT
GcgtaattactaattactatACTGCGCTGTGCTTTGTTATTTACTCATTG
TCCTGTTTTTGTTGCTGACTGTTTTGCTTCAATTCAATTAGGATGAGAAG
GAGGTACAGAAATCTGCTTTCAAACAGTACCGTGTATTACGATCAGCTAC
TGATTTCAGATACGGCTACAAACTTGTTGTAATGCTCCTATACTTCTTTT
ATGCTATAtctcaacaaatattttaaatgcaaTTTCAGTTTTTACATAGT
TATCGATCAAAAGTTTTTACGTTGttgaaattttactttatacAGAAGTT
AGAAGACCATTCCCACATGTTATCTGTTGTTTTAACTTTTTGGTATGata
aatttgcaggaaaatggCAATATAAGAGCTGCTCTTTCTACCACTGACGT
TATTGAGGTAACACTCTTGACATGTTCTCTGTTACCATCATAATGTTTTT
TTGAAGTTCCACGCAGAATTTTAAACCTCTCAGCATTAGAAATGTATATG
TTTTActaatacaacaaaaaaattctGGTTGTTTTTGCAACTTTTCAGTT
TGATATATTTGCAGGAAAATAGTAACTTTCATTATCATTGGAATTTATAG
ATTTAGATTTTTGACTCCTATAGATTGATAATAGTCCACATTATGTATAC
TTTctacttaattatattatttttatccaaatattcAGGAAAACTATTTT
GGATACTTTCCCactaatatattatgtttttccAAATTGAAGCTCCCAAC
CGAAGATCAACTAAAAACCGTTCTTGATAAAGTGAAAGACTTTTTCGGAG
ACGCAAAGGAATCTTTTGGGAAGATAACATCATTGGGCACTACTGCAACG
GAGGATTCAGACGaagatacaaaagaaaaagccaagtgA

Coding sequence (CDS) from alignment at Chr_1-CM003603.1:1743178..1747066+

>rna-KK1_019914_Cc_Asha_v1.0 ID=rna-KK1_019914_Cc_Asha_v1.0; Name=rna-KK1_019914; organism=Cajanus cajan; type=CDS; length=1380bp; location=Sequence derived from: Chr_1-CM003603.1:1743178..1747066+ (Cajanus cajan
ATGGAAGTAGCAATGTCTCTGAACGCGCTCGTTCGTCTTCCTCTCTCGAG
TTCGCGCTTCCACGACGAGGCTCCGGCGAGACACTCTCTGTTTTCGAGCC
GCACGCGGCGGAGTTGCAAGGCTCCGCCACCGCGGCACGTGCTGGTGGTG
GAAGCCAAGGGCAAAAAGGGAATGATGTCTCGTCAATTCCAGCGCTCCGC
ACCTCCTCCTTTGCCCAAACTCGAAGACGATGGGAATCCCAAATTCGTTA
TCTTCATTCGCATGGCCAATATGGAAGTAGCAATGTCTCTGAACGCGCTC
GTTCGTCTTCCTCTCTCGAGTTCGCGCTTCCACGACGAGGCTCCGGCGAG
ACACTCTCTGTTTTCGAGCCGCACGCGGCGGAGTTGCAAGGCTCCGCCAC
CGCGGCACGTGCTGGTGGTGGAAGCCAAGGGCAAAAAGGGAATGATGTCT
CGTCAATTCCAGCGCTCCGCACCTCCTCCTTTGCCCAAACTCGAAGACGA
TGGGAATCCCAAATTCGTTATCTTCATTCGCATGGCCAATGTATACCTTT
GGTACCCTCTTAGCATCGTAACAGGTGGCACCACTGCTAAAATCATGGTT
GCGGCTAAAGATAATTTCCTGGGcaagtatatttataaagacACCCTTGA
TAGAAATCTCGCCGCTGTTATCTACCGGGTATACCTTTGGTACCCTCTTA
GCATCGTAACAGGTGGCACCACTGCTAAAATCATGGTTGCGGCTAAAGAT
AATTTCCTGGGcaagtatatttataaagacACCCTTGATAGAAATCTCGC
CGCTGTTATCTACCGGGATGAGAAGGAGGTACAGAAATCTGCTTTCAAAC
AGTACCGTGTATTACGATCAGCTACTGATTTCAGATACGGCTACAAACTT
GTTGATGAGAAGGAGGTACAGAAATCTGCTTTCAAACAGTACCGTGTATT
ACGATCAGCTACTGATTTCAGATACGGCTACAAACTTGTTgaaaatggCA
ATATAAGAGCTGCTCTTTCTACCACTGACGTTATTGAGgaaaatggCAAT
ATAAGAGCTGCTCTTTCTACCACTGACGTTATTGAGCTCCCAACCGAAGA
TCAACTAAAAACCGTTCTTGATAAAGTGAAAGACTTTTTCGGAGACGCAA
AGGAATCTTTTGGGAAGATAACATCATTGGGCACTACTGCAACGGAGGAT
TCAGACGaagatacaaaagaaaaagccaagtgACTCCCAACCGAAGATCA
ACTAAAAACCGTTCTTGATAAAGTGAAAGACTTTTTCGGAGACGCAAAGG
AATCTTTTGGGAAGATAACATCATTGGGCACTACTGCAACGGAGGATTCA
GACGaagatacaaaagaaaaagccaagtgA

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