rna-KK1_019924

Transcript Overview


Name	rna-KK1_019924
Unique Name	rna-KK1_019924_Cc_Asha_v1.0
Type	mRNA
Organism	Cajanus cajan (pigeon pea)
Sequence length	771
Product	RING finger protein 141

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_1-CM003603.1	supercontig	Chr_1-CM003603.1:1791893..1793449 +	Cajanus cajan Asha genome v1.0	n/a
Chr_1-CM003603.1	supercontig	Chr_1-CM003603.1:1791893..1793449 +	Cajanus cajan Asha genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cajanus cajan Asha genome v1.0	2019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot	2019-10-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
cccrR0011	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
cccrR0028	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ccpsR022	Pisum sativum Cameor genome v1a	Pisum sativum
ccpsR024	Pisum sativum Cameor genome v1a	Pisum sativum
ccpsR033	Pisum sativum Cameor genome v1a	Pisum sativum
ccccR001	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccpvR0004	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccpvR0019	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccpvR0036	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccvuR0003	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
ccvuR0016	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
caiccL0517	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caiccL0518	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caccL0156	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
caccL0552	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
caccL0729	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
anccL0256	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0379	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0433	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0833	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0912	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
asccL0009	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
asccL0662	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
cctifR0008	Vicia faba cv. Tiffany genome v1.0	Vicia faba
cctifR0010	Vicia faba cv. Tiffany genome v1.0	Vicia faba
ccvfhR0008	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccvfhR0010	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccvrvR0014	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccvrvR0038	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccvssR0010	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccvuaR0003	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
ccvssR0042	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccvuaR0020	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
canccL0154	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canccL0553	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjccL0001	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjccL0331	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjccL0697	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carccL0160		Cicer arietinum
carccL0594		Cicer arietinum
ccccaR0000	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccccaR0054	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccvumR0009	Vigna umbellata FF25 genome v1.0	Vigna umbellata
ccvumR0042	Vigna umbellata FF25 genome v1.0	Vigna umbellata

Orthologs


Gene/Transcript	Assembly	Species
Va03G084790.2	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
rna-TanjilR_32989	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Ca_13817.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
Phvul.002G177300.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Va01G037970.2	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
rna-XM_022778829.1	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
jg30364.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vfaba.Hedin2.R1.2g113560.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Vigun03g171800.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Cr_13054.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
Vfaba.Tiffany.R1.2g093160.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
rna-XM_004502283.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
LR48_mrnaVigan03g312000	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
rna-XM_014651448.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Vum_01G01524.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Ca_11307	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
evm.model.Chr01.2292	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Vigun01g243400.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
rna-TanjilR_09097	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
evm.model.Chr03.3695	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Phvul.001G257800.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
LR48_mrnaVigan01g092200	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
rna-TanjilR_11015	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Psat5g093560.1	Pisum sativum Cameor genome v1a	Pisum sativum
Vum_04G03189.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
jg53607.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Psat7g079800.1	Pisum sativum Cameor genome v1a	Pisum sativum

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
rna-KK1_025195	Cajanus cajan Asha genome v1.0	Cajanus cajan
Cc_v2.0_22002.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-KK1_019924	gene-KK1_019924_Cc_Asha_v1.0	Cajanus cajan	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-KK1_019924	rna-KK1_019924_Cc_Asha_v1.0-protein	Cajanus cajan	polypeptide
rna-KK1_019924_Cc_Asha_v1.0	rna-KK1_019924_Cc_Asha_v1.0	Cajanus cajan	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1791893..1791981	rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1791893..1791981	Cajanus cajan	exon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1791893..1791981	rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1791893..1791981	Cajanus cajan	exon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792264..1792426	rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792264..1792426	Cajanus cajan	exon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792264..1792426	rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792264..1792426	Cajanus cajan	exon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792580..1792646	rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792580..1792646	Cajanus cajan	exon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792580..1792646	rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792580..1792646	Cajanus cajan	exon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792775..1793015	rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792775..1793015	Cajanus cajan	exon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792775..1793015	rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792775..1793015	Cajanus cajan	exon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1793239..1793449	rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1793239..1793449	Cajanus cajan	exon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1793239..1793449	rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1793239..1793449	Cajanus cajan	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1791893..1791981	rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1791893..1791981	Cajanus cajan	CDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1791893..1791981	rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1791893..1791981	Cajanus cajan	CDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792264..1792426	rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792264..1792426	Cajanus cajan	CDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792264..1792426	rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792264..1792426	Cajanus cajan	CDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792580..1792646	rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792580..1792646	Cajanus cajan	CDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792580..1792646	rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792580..1792646	Cajanus cajan	CDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792775..1793015	rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792775..1793015	Cajanus cajan	CDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792775..1793015	rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792775..1793015	Cajanus cajan	CDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1793239..1793449	rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1793239..1793449	Cajanus cajan	CDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1793239..1793449	rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1793239..1793449	Cajanus cajan	CDS

Homology

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BLAST of rna-KK1_019924 vs. DB:Swiss
Match: AIRP2_ARATH (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.964e-76
Identity = 115/231 (49.78%), Postives = 152/231 (65.80%), Query Frame = 1

Query:   28 RLPYHDSLKVLEADIQHANALAAAIPRAKGGTLLQMKLVYNHLAPLFLLFLQWMDCSCAGFLHRYLNLFHIIIYKVHNDGRSSMSTHGRKATIGDFYAVILPSLQRLHGSLEKLEVCEKGQSSIEGSSHGKKVTEEGGKLTNVDLQREDECGICLEPCTKMVLPGCCHAMCIKCYRKWNRKSESCPFCRGSLRRVNSEDLWVLTCNDDVVDAETVSREDLLRFYLYISKLP 720
            R  + DSLK LEADIQ AN LA+  P    G  +QM+L Y+  A LFL  LQW DC  AG L     L  I+IYK + DG+++MS H RK +I +FY V+ PSL +LHG +  +E  E+ Q  I    + KK   + GK++ +DL+RE+ECGICLE   K+VLP C H+MCI CYR W  +S+SCPFCRGSL+RVNS DLW+ TC+ ++ D   + +E+L R  +YI KLP
Sbjct:    2 RKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL----GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVE--ERKQKEICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLP 226

The following BLAST results are available for this feature:

BLAST of rna-KK1_019924 vs. DB:Swiss

BLAST of rna-KK1_019924 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
AIRP2_ARATH	1.964e-76	49.78	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis t...	[more]

InterPro

Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 160..197 e-value: 7.3E-4 score: 28.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 158..198 e-value: 5.1E-8 score: 33.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 160..198 score: 11.634
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 131..209 e-value: 4.5E-13 score: 50.4
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 175..184
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 151..202

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_1-CM003603.1:1791893..1793449+
coding sequence from alignment at Chr_1-CM003603.1:1791893..1793449+

mRNA sequence

>rna-KK1_019924_Cc_Asha_v1.0 ID=rna-KK1_019924_Cc_Asha_v1.0; Name=rna-KK1_019924; organism=Cajanus cajan; type=mRNA; length=771bp
ATGGCAATGATTCCGTACCACCTTTCTCGTTTACCTTACCACGATTCCCT
CAAAGTACTCGAGGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAA
TTCCCAGAGCCAAGGGTGGGACTCTTCTTCAAATGAAATTGGTTTACAAT
CACTTGGCTCCTCTCTTCCTGTTATTTCTACAATGGATGGATTGTTCTTG
TGCAGGCTTTCTCCATAGGTATCTCAACCTCTTCCACATAATTATATACA
AGGTACACAATGATGGTAGATCAAGCATGTCTACACATGGAAGGAAGGCC
ACAATTGGGGACTTTTATGCCGTTATATTGCCGTCTCTCCAGCGGCTTCA
TGGTAGTTTGGAGAAGTTGGAGGTTTGTGAAAAAGGGCAATCAAGCATAG
AAGGTTCAAGTCATGGCAAGAAGGTGACCGAAGAAGGTGGGAAACTTACC
AATGTTGATTTGCAAAGAGAAGATGAATGTGGGATTTGCTTAGAGCCTTG
CACCAAAATGGTTTTACCCGGTTGCTGCCACGCCATGTGTATTAAATGCT
ACCGCAAGTGGAACCGAAAATCGGAGTCTTGTCCTTTTTGCCGTGGTAGC
TTGAGGAGAGTTAATTCAGAGGATCTATGGGTGTTAACTTGTAATGATGA
TGTTGTTGATGCAGAAACGGTTTCTAGGGAGGATTTGTTGCGTTTTTATC
TCTATATCAGCAAGTTGCCAAAAGATCACCCAGATGCACTTTTTCTAATG
TATTATGAATACTTGATTTAG

protein sequence of rna-KK1_019924_Cc_Asha_v1.0

>rna-KK1_019924_Cc_Asha_v1.0 ID=rna-KK1_019924_Cc_Asha_v1.0; Name=rna-KK1_019924_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=256bp
MAMIPYHLSRLPYHDSLKVLEADIQHANALAAAIPRAKGGTLLQMKLVYN
HLAPLFLLFLQWMDCSCAGFLHRYLNLFHIIIYKVHNDGRSSMSTHGRKA
TIGDFYAVILPSLQRLHGSLEKLEVCEKGQSSIEGSSHGKKVTEEGGKLT
NVDLQREDECGICLEPCTKMVLPGCCHAMCIKCYRKWNRKSESCPFCRGS
LRRVNSEDLWVLTCNDDVVDAETVSREDLLRFYLYISKLPKDHPDALFLM
YYEYLI

mRNA from alignment at Chr_1-CM003603.1:1791893..1793449+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-KK1_019924_Cc_Asha_v1.0 ID=rna-KK1_019924_Cc_Asha_v1.0; Name=rna-KK1_019924; organism=Cajanus cajan; type=mRNA; length=1557bp; location=Sequence derived from: Chr_1-CM003603.1:1791893..1793449+ (Cajanus cajan
ATGGCAATGATTCCGTACCACCTTTCTCGTTTACCTTACCACGATTCCCT
CAAAGTACTCGAGGCTGATATACAGCACGCCAATGCTTTgtgagtttaaa
tttttaatttttccttcaattaattaactttccTTTTGTGTGTATGTTTT
TGGGCACTAGGAAAAAAGTGGGAGTGAAGGGTCTTCTCTGATTGTTGATT
ATTGTCTTTAATTGTTTGCTAATCAGTTATGTTTTTAGAAAAGGGacata
attattaatcaagTTTTTACTCATAATAGGAATTTACTAATTACTTATGA
ATTTGTCaatttgattgtgaattttattttttcccccCTCTGAATTTGGA
TTGTGTGTTGTGCCCCTCTAGGGCTGCTGCAATTCCCAGAGCCAAGGGTG
GGACTCTTCTTCAAATGAAATTGGTTTACAATCACTTGGCTCCTCTCTTC
CTGTTATTTCTACAATGGATGGATTGTTCTTGTGCAGGCTTTCTCCATAG
GTATCTCAACCTCTTCCACATAATTATATACAAGGTATCTTTCTTTCTAT
TTCCTTCTGTTGTTCCATTGTTCTTTGTTCCTTTTTTTGTTTGACTTTTT
GGACTGTTTGGCCAATAATAATACCTATGGTCTATATAATTgatcatgtt
tttcttttgctGGTGTTGCTCTCATAATTTACCATAGGTACACAATGATG
GTAGATCAAGCATGTCTACACATGGAAGGAAGGCCACAATTGGGGACTTT
TATGGTGTGTGAATGTTTGACTTGTGAAAAAAAAgcttttttatgatttt
tttaatagaaagtgTAATCAATTTGTGGCTGTCATTGCTGACTATTCCTC
ATTGTTTATGTGATTATAAATTGAACTTTTAGCCGTTATATTGCCGTCTC
TCCAGCGGCTTCATGGTAGTTTGGAGAAGTTGGAGGTTTGTGAAAAAGGG
CAATCAAGCATAGAAGGTTCAAGTCATGGCAAGAAGGTGACCGAAGAAGG
TGGGAAACTTACCAATGTTGATTTGCAAAGAGAAGATGAATGTGGGATTT
GCTTAGAGCCTTGCACCAAAATGGTTTTACCCGGTTGCTGCCACGCCATG
TGTATTAAATGCTACCGCAAGTGGTAATCAATATAGCTTCTGTTCATATT
TTCATATTGAGTCTGTGTGCATACAAGTTTTAAGTGTTCTTGAGAGCTtg
tgtattggaaaaaaaactCATTATCTTCAGTAGAGAAGCTTACAGCAACT
CTATTAAGAACAGGCTCATTGTCAACCATCAAATTTATATGCCATTGCCA
ATGGTTTGTTGTTTTGACATTTGTGCTGGACTTTTGTGACTCACAGGAAC
CGAAAATCGGAGTCTTGTCCTTTTTGCCGTGGTAGCTTGAGGAGAGTTAA
TTCAGAGGATCTATGGGTGTTAACTTGtaatgatgatgttgttgatgcaG
AAACGGTTTCTAGGGAGGATTTGTTGCGTTTTTATCTCTATATCAGCAAG
TTGCCAAAAGATCACCCAGATGCACTTTTTCTAATGTATTATGAATACTT
GATTTAG

Coding sequence (CDS) from alignment at Chr_1-CM003603.1:1791893..1793449+

>rna-KK1_019924_Cc_Asha_v1.0 ID=rna-KK1_019924_Cc_Asha_v1.0; Name=rna-KK1_019924; organism=Cajanus cajan; type=CDS; length=1542bp; location=Sequence derived from: Chr_1-CM003603.1:1791893..1793449+ (Cajanus cajan
ATGGCAATGATTCCGTACCACCTTTCTCGTTTACCTTACCACGATTCCCT
CAAAGTACTCGAGGCTGATATACAGCACGCCAATGCTTTATGGCAATGAT
TCCGTACCACCTTTCTCGTTTACCTTACCACGATTCCCTCAAAGTACTCG
AGGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAATTCCCAGAGCC
AAGGGTGGGACTCTTCTTCAAATGAAATTGGTTTACAATCACTTGGCTCC
TCTCTTCCTGTTATTTCTACAATGGATGGATTGTTCTTGTGCAGGCTTTC
TCCATAGGTATCTCAACCTCTTCCACATAATTATATACAAGGGCTGCTGC
AATTCCCAGAGCCAAGGGTGGGACTCTTCTTCAAATGAAATTGGTTTACA
ATCACTTGGCTCCTCTCTTCCTGTTATTTCTACAATGGATGGATTGTTCT
TGTGCAGGCTTTCTCCATAGGTATCTCAACCTCTTCCACATAATTATATA
CAAGGTACACAATGATGGTAGATCAAGCATGTCTACACATGGAAGGAAGG
CCACAATTGGGGACTTTTATGGTACACAATGATGGTAGATCAAGCATGTC
TACACATGGAAGGAAGGCCACAATTGGGGACTTTTATGCCGTTATATTGC
CGTCTCTCCAGCGGCTTCATGGTAGTTTGGAGAAGTTGGAGGTTTGTGAA
AAAGGGCAATCAAGCATAGAAGGTTCAAGTCATGGCAAGAAGGTGACCGA
AGAAGGTGGGAAACTTACCAATGTTGATTTGCAAAGAGAAGATGAATGTG
GGATTTGCTTAGAGCCTTGCACCAAAATGGTTTTACCCGGTTGCTGCCAC
GCCATGTGTATTAAATGCTACCGCAAGTGCCGTTATATTGCCGTCTCTCC
AGCGGCTTCATGGTAGTTTGGAGAAGTTGGAGGTTTGTGAAAAAGGGCAA
TCAAGCATAGAAGGTTCAAGTCATGGCAAGAAGGTGACCGAAGAAGGTGG
GAAACTTACCAATGTTGATTTGCAAAGAGAAGATGAATGTGGGATTTGCT
TAGAGCCTTGCACCAAAATGGTTTTACCCGGTTGCTGCCACGCCATGTGT
ATTAAATGCTACCGCAAGTGGAACCGAAAATCGGAGTCTTGTCCTTTTTG
CCGTGGTAGCTTGAGGAGAGTTAATTCAGAGGATCTATGGGTGTTAACTT
GtaatgatgatgttgttgatgcaGAAACGGTTTCTAGGGAGGATTTGTTG
CGTTTTTATCTCTATATCAGCAAGTTGCCAAAAGATCACCCAGATGCACT
TTTTCTAATGTATTATGAATACTTGATTTAGGAACCGAAAATCGGAGTCT
TGTCCTTTTTGCCGTGGTAGCTTGAGGAGAGTTAATTCAGAGGATCTATG
GGTGTTAACTTGtaatgatgatgttgttgatgcaGAAACGGTTTCTAGGG
AGGATTTGTTGCGTTTTTATCTCTATATCAGCAAGTTGCCAAAAGATCAC
CCAGATGCACTTTTTCTAATGTATTATGAATACTTGATTTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR017907	Znf_RING_CS

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