rna-KK1_019924

Transcript Overview
Namerna-KK1_019924
Unique Namerna-KK1_019924_Cc_Asha_v1.0
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length771
ProductRING finger protein 141
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_1-CM003603.1supercontigChr_1-CM003603.1:1791893..1793449 +Cajanus cajan Asha genome v1.0n/a
Chr_1-CM003603.1supercontigChr_1-CM003603.1:1791893..1793449 +Cajanus cajan Asha genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Cajanus cajan Asha genome v1.02019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
cccrR0011Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cccrR0028Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ccpsR022Pisum sativum Cameor genome v1aPisum sativum
ccpsR024Pisum sativum Cameor genome v1aPisum sativum
ccpsR033Pisum sativum Cameor genome v1aPisum sativum
ccccR001Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvR0004Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpvR0019Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccpvR0036Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccvuR0003Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccvuR0016Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caiccL0517Cicer arietinum ICC 4958 genome v2Cicer arietinum
caiccL0518Cicer arietinum ICC 4958 genome v2Cicer arietinum
caccL0156Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0552Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caccL0729Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anccL0256Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0379Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0433Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0833Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccL0912Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asccL0009Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asccL0662Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cctifR0008Vicia faba cv. Tiffany genome v1.0Vicia faba
cctifR0010Vicia faba cv. Tiffany genome v1.0Vicia faba
ccvfhR0008Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvfhR0010Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvrvR0014Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvrvR0038Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccvssR0010Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvuaR0003Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ccvssR0042Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccvuaR0020Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canccL0154Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canccL0553Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjccL0001Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0331Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccL0697Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccL0160Cicer arietinum
carccL0594Cicer arietinum
ccccaR0000Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccccaR0054Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccvumR0009Vigna umbellata FF25 genome v1.0Vigna umbellata
ccvumR0042Vigna umbellata FF25 genome v1.0Vigna umbellata

Orthologs
Gene/TranscriptAssemblySpecies
Va03G084790.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_32989Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_13817.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Phvul.002G177300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Va01G037970.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_022778829.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg30364.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.2g113560.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun03g171800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_13054.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vfaba.Tiffany.R1.2g093160.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_004502283.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
LR48_mrnaVigan03g312000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014651448.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vum_01G01524.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_11307Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
evm.model.Chr01.2292Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigun01g243400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_09097Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr03.3695Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.001G257800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
LR48_mrnaVigan01g092200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_11015Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Psat5g093560.1Pisum sativum Cameor genome v1aPisum sativum
Vum_04G03189.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg53607.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat7g079800.1Pisum sativum Cameor genome v1aPisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_025195Cajanus cajan Asha genome v1.0Cajanus cajan
Cc_v2.0_22002.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-KK1_019924gene-KK1_019924_Cc_Asha_v1.0Cajanus cajangene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_019924rna-KK1_019924_Cc_Asha_v1.0-proteinCajanus cajanpolypeptide
rna-KK1_019924_Cc_Asha_v1.0rna-KK1_019924_Cc_Asha_v1.0Cajanus cajanpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1791893..1791981rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1791893..1791981Cajanus cajanexon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1791893..1791981rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1791893..1791981Cajanus cajanexon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792264..1792426rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792264..1792426Cajanus cajanexon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792264..1792426rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792264..1792426Cajanus cajanexon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792580..1792646rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792580..1792646Cajanus cajanexon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792580..1792646rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792580..1792646Cajanus cajanexon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792775..1793015rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792775..1793015Cajanus cajanexon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792775..1793015rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792775..1793015Cajanus cajanexon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1793239..1793449rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1793239..1793449Cajanus cajanexon
rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1793239..1793449rna-KK1_019924_Cc_Asha_v1.0-exon-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1793239..1793449Cajanus cajanexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1791893..1791981rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1791893..1791981Cajanus cajanCDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1791893..1791981rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1791893..1791981Cajanus cajanCDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792264..1792426rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792264..1792426Cajanus cajanCDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792264..1792426rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792264..1792426Cajanus cajanCDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792580..1792646rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792580..1792646Cajanus cajanCDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792580..1792646rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792580..1792646Cajanus cajanCDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792775..1793015rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1792775..1793015Cajanus cajanCDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792775..1793015rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1792775..1793015Cajanus cajanCDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1793239..1793449rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571082112:1793239..1793449Cajanus cajanCDS
rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1793239..1793449rna-KK1_019924_Cc_Asha_v1.0-CDS-Chr_1-CM003603.1_Cc_Asha_v1.0-1571847872:1793239..1793449Cajanus cajanCDS


Homology
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BLAST of rna-KK1_019924 vs. DB:Swiss
Match: AIRP2_ARATH (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.964e-76
Identity = 115/231 (49.78%), Postives = 152/231 (65.80%), Query Frame = 1 
Query:   28 RLPYHDSLKVLEADIQHANALAAAIPRAKGGTLLQMKLVYNHLAPLFLLFLQWMDCSCAGFLHRYLNLFHIIIYKVHNDGRSSMSTHGRKATIGDFYAVILPSLQRLHGSLEKLEVCEKGQSSIEGSSHGKKVTEEGGKLTNVDLQREDECGICLEPCTKMVLPGCCHAMCIKCYRKWNRKSESCPFCRGSLRRVNSEDLWVLTCNDDVVDAETVSREDLLRFYLYISKLP 720
            R  + DSLK LEADIQ AN LA+  P    G  +QM+L Y+  A LFL  LQW DC  AG L     L  I+IYK + DG+++MS H RK +I +FY V+ PSL +LHG +  +E  E+ Q  I    + KK   + GK++ +DL+RE+ECGICLE   K+VLP C H+MCI CYR W  +S+SCPFCRGSL+RVNS DLW+ TC+ ++ D   + +E+L R  +YI KLP
Sbjct:    2 RKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFAGAL----GLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVE--ERKQKEICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLP 226
The following BLAST results are available for this feature:
BLAST of rna-KK1_019924 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
AIRP2_ARATH1.964e-7649.78E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis t... [more]
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InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 160..197
e-value: 7.3E-4
score: 28.8
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 158..198
e-value: 5.1E-8
score: 33.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 160..198
score: 11.634
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 131..209
e-value: 4.5E-13
score: 50.4
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 175..184
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 151..202

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-KK1_019924_Cc_Asha_v1.0 ID=rna-KK1_019924_Cc_Asha_v1.0; Name=rna-KK1_019924; organism=Cajanus cajan; type=mRNA; length=771bp
ATGGCAATGATTCCGTACCACCTTTCTCGTTTACCTTACCACGATTCCCT
CAAAGTACTCGAGGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAA
TTCCCAGAGCCAAGGGTGGGACTCTTCTTCAAATGAAATTGGTTTACAAT
CACTTGGCTCCTCTCTTCCTGTTATTTCTACAATGGATGGATTGTTCTTG
TGCAGGCTTTCTCCATAGGTATCTCAACCTCTTCCACATAATTATATACA
AGGTACACAATGATGGTAGATCAAGCATGTCTACACATGGAAGGAAGGCC
ACAATTGGGGACTTTTATGCCGTTATATTGCCGTCTCTCCAGCGGCTTCA
TGGTAGTTTGGAGAAGTTGGAGGTTTGTGAAAAAGGGCAATCAAGCATAG
AAGGTTCAAGTCATGGCAAGAAGGTGACCGAAGAAGGTGGGAAACTTACC
AATGTTGATTTGCAAAGAGAAGATGAATGTGGGATTTGCTTAGAGCCTTG
CACCAAAATGGTTTTACCCGGTTGCTGCCACGCCATGTGTATTAAATGCT
ACCGCAAGTGGAACCGAAAATCGGAGTCTTGTCCTTTTTGCCGTGGTAGC
TTGAGGAGAGTTAATTCAGAGGATCTATGGGTGTTAACTTGTAATGATGA
TGTTGTTGATGCAGAAACGGTTTCTAGGGAGGATTTGTTGCGTTTTTATC
TCTATATCAGCAAGTTGCCAAAAGATCACCCAGATGCACTTTTTCTAATG
TATTATGAATACTTGATTTAG
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protein sequence of rna-KK1_019924_Cc_Asha_v1.0

>rna-KK1_019924_Cc_Asha_v1.0 ID=rna-KK1_019924_Cc_Asha_v1.0; Name=rna-KK1_019924_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=256bp
MAMIPYHLSRLPYHDSLKVLEADIQHANALAAAIPRAKGGTLLQMKLVYN
HLAPLFLLFLQWMDCSCAGFLHRYLNLFHIIIYKVHNDGRSSMSTHGRKA
TIGDFYAVILPSLQRLHGSLEKLEVCEKGQSSIEGSSHGKKVTEEGGKLT
NVDLQREDECGICLEPCTKMVLPGCCHAMCIKCYRKWNRKSESCPFCRGS
LRRVNSEDLWVLTCNDDVVDAETVSREDLLRFYLYISKLPKDHPDALFLM
YYEYLI
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mRNA from alignment at Chr_1-CM003603.1:1791893..1793449+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-KK1_019924_Cc_Asha_v1.0 ID=rna-KK1_019924_Cc_Asha_v1.0; Name=rna-KK1_019924; organism=Cajanus cajan; type=mRNA; length=1557bp; location=Sequence derived from: Chr_1-CM003603.1:1791893..1793449+ (Cajanus cajan
ATGGCAATGATTCCGTACCACCTTTCTCGTTTACCTTACCACGATTCCCT
CAAAGTACTCGAGGCTGATATACAGCACGCCAATGCTTTgtgagtttaaa
tttttaatttttccttcaattaattaactttccTTTTGTGTGTATGTTTT
TGGGCACTAGGAAAAAAGTGGGAGTGAAGGGTCTTCTCTGATTGTTGATT
ATTGTCTTTAATTGTTTGCTAATCAGTTATGTTTTTAGAAAAGGGacata
attattaatcaagTTTTTACTCATAATAGGAATTTACTAATTACTTATGA
ATTTGTCaatttgattgtgaattttattttttcccccCTCTGAATTTGGA
TTGTGTGTTGTGCCCCTCTAGGGCTGCTGCAATTCCCAGAGCCAAGGGTG
GGACTCTTCTTCAAATGAAATTGGTTTACAATCACTTGGCTCCTCTCTTC
CTGTTATTTCTACAATGGATGGATTGTTCTTGTGCAGGCTTTCTCCATAG
GTATCTCAACCTCTTCCACATAATTATATACAAGGTATCTTTCTTTCTAT
TTCCTTCTGTTGTTCCATTGTTCTTTGTTCCTTTTTTTGTTTGACTTTTT
GGACTGTTTGGCCAATAATAATACCTATGGTCTATATAATTgatcatgtt
tttcttttgctGGTGTTGCTCTCATAATTTACCATAGGTACACAATGATG
GTAGATCAAGCATGTCTACACATGGAAGGAAGGCCACAATTGGGGACTTT
TATGGTGTGTGAATGTTTGACTTGTGAAAAAAAAgcttttttatgatttt
tttaatagaaagtgTAATCAATTTGTGGCTGTCATTGCTGACTATTCCTC
ATTGTTTATGTGATTATAAATTGAACTTTTAGCCGTTATATTGCCGTCTC
TCCAGCGGCTTCATGGTAGTTTGGAGAAGTTGGAGGTTTGTGAAAAAGGG
CAATCAAGCATAGAAGGTTCAAGTCATGGCAAGAAGGTGACCGAAGAAGG
TGGGAAACTTACCAATGTTGATTTGCAAAGAGAAGATGAATGTGGGATTT
GCTTAGAGCCTTGCACCAAAATGGTTTTACCCGGTTGCTGCCACGCCATG
TGTATTAAATGCTACCGCAAGTGGTAATCAATATAGCTTCTGTTCATATT
TTCATATTGAGTCTGTGTGCATACAAGTTTTAAGTGTTCTTGAGAGCTtg
tgtattggaaaaaaaactCATTATCTTCAGTAGAGAAGCTTACAGCAACT
CTATTAAGAACAGGCTCATTGTCAACCATCAAATTTATATGCCATTGCCA
ATGGTTTGTTGTTTTGACATTTGTGCTGGACTTTTGTGACTCACAGGAAC
CGAAAATCGGAGTCTTGTCCTTTTTGCCGTGGTAGCTTGAGGAGAGTTAA
TTCAGAGGATCTATGGGTGTTAACTTGtaatgatgatgttgttgatgcaG
AAACGGTTTCTAGGGAGGATTTGTTGCGTTTTTATCTCTATATCAGCAAG
TTGCCAAAAGATCACCCAGATGCACTTTTTCTAATGTATTATGAATACTT
GATTTAG
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Coding sequence (CDS) from alignment at Chr_1-CM003603.1:1791893..1793449+

>rna-KK1_019924_Cc_Asha_v1.0 ID=rna-KK1_019924_Cc_Asha_v1.0; Name=rna-KK1_019924; organism=Cajanus cajan; type=CDS; length=1542bp; location=Sequence derived from: Chr_1-CM003603.1:1791893..1793449+ (Cajanus cajan
ATGGCAATGATTCCGTACCACCTTTCTCGTTTACCTTACCACGATTCCCT
CAAAGTACTCGAGGCTGATATACAGCACGCCAATGCTTTATGGCAATGAT
TCCGTACCACCTTTCTCGTTTACCTTACCACGATTCCCTCAAAGTACTCG
AGGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAATTCCCAGAGCC
AAGGGTGGGACTCTTCTTCAAATGAAATTGGTTTACAATCACTTGGCTCC
TCTCTTCCTGTTATTTCTACAATGGATGGATTGTTCTTGTGCAGGCTTTC
TCCATAGGTATCTCAACCTCTTCCACATAATTATATACAAGGGCTGCTGC
AATTCCCAGAGCCAAGGGTGGGACTCTTCTTCAAATGAAATTGGTTTACA
ATCACTTGGCTCCTCTCTTCCTGTTATTTCTACAATGGATGGATTGTTCT
TGTGCAGGCTTTCTCCATAGGTATCTCAACCTCTTCCACATAATTATATA
CAAGGTACACAATGATGGTAGATCAAGCATGTCTACACATGGAAGGAAGG
CCACAATTGGGGACTTTTATGGTACACAATGATGGTAGATCAAGCATGTC
TACACATGGAAGGAAGGCCACAATTGGGGACTTTTATGCCGTTATATTGC
CGTCTCTCCAGCGGCTTCATGGTAGTTTGGAGAAGTTGGAGGTTTGTGAA
AAAGGGCAATCAAGCATAGAAGGTTCAAGTCATGGCAAGAAGGTGACCGA
AGAAGGTGGGAAACTTACCAATGTTGATTTGCAAAGAGAAGATGAATGTG
GGATTTGCTTAGAGCCTTGCACCAAAATGGTTTTACCCGGTTGCTGCCAC
GCCATGTGTATTAAATGCTACCGCAAGTGCCGTTATATTGCCGTCTCTCC
AGCGGCTTCATGGTAGTTTGGAGAAGTTGGAGGTTTGTGAAAAAGGGCAA
TCAAGCATAGAAGGTTCAAGTCATGGCAAGAAGGTGACCGAAGAAGGTGG
GAAACTTACCAATGTTGATTTGCAAAGAGAAGATGAATGTGGGATTTGCT
TAGAGCCTTGCACCAAAATGGTTTTACCCGGTTGCTGCCACGCCATGTGT
ATTAAATGCTACCGCAAGTGGAACCGAAAATCGGAGTCTTGTCCTTTTTG
CCGTGGTAGCTTGAGGAGAGTTAATTCAGAGGATCTATGGGTGTTAACTT
GtaatgatgatgttgttgatgcaGAAACGGTTTCTAGGGAGGATTTGTTG
CGTTTTTATCTCTATATCAGCAAGTTGCCAAAAGATCACCCAGATGCACT
TTTTCTAATGTATTATGAATACTTGATTTAGGAACCGAAAATCGGAGTCT
TGTCCTTTTTGCCGTGGTAGCTTGAGGAGAGTTAATTCAGAGGATCTATG
GGTGTTAACTTGtaatgatgatgttgttgatgcaGAAACGGTTTCTAGGG
AGGATTTGTTGCGTTTTTATCTCTATATCAGCAAGTTGCCAAAAGATCAC
CCAGATGCACTTTTTCTAATGTATTATGAATACTTGATTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS