rna-KK1_019927

Transcript Overview


Name	rna-KK1_019927
Unique Name	rna-KK1_019927_Cc_Asha_v1.0
Type	mRNA
Organism	Cajanus cajan (pigeon pea)
Sequence length	1335
Product	hypothetical protein

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_1-CM003603.1	supercontig	Chr_1-CM003603.1:1809738..1815196 +	Cajanus cajan Asha genome v1.0	n/a
Chr_1-CM003603.1	supercontig	Chr_1-CM003603.1:1809738..1815196 +	Cajanus cajan Asha genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cajanus cajan Asha genome v1.0	2019-09-17
BLAST: C. cajan Asha genome v1.0 vs. Swissprot	2019-10-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
cccrR0011	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
cccrR0023	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
cccrR0028	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ccpsR022	Pisum sativum Cameor genome v1a	Pisum sativum
ccpsR024	Pisum sativum Cameor genome v1a	Pisum sativum
ccpsR036	Pisum sativum Cameor genome v1a	Pisum sativum
ccpvR0004	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccpvR0017	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccpvR0036	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccvuR0003	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
caiccL0517	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caiccL0518	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caccL0156	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
caccL0552	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
caccL0729	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
anccL0379	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0433	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0833	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccL0912	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
asccL0662	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
cctifR0008	Vicia faba cv. Tiffany genome v1.0	Vicia faba
cctifR0010	Vicia faba cv. Tiffany genome v1.0	Vicia faba
ccvfhR0008	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccvfhR0010	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccvrvR0014	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccvssR0010	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccvuaR0003	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
ccvssR0038	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
canccL0154	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canccL0553	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canccL0735	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjccL0001	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjccL0697	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carccL0160		Cicer arietinum
carccL0594		Cicer arietinum
carccL0785		Cicer arietinum
ccccaR0000	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccccaR0050	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccvumR0042	Vigna umbellata FF25 genome v1.0	Vigna umbellata

Orthologs


Gene/Transcript	Assembly	Species
evm.model.Chr01.2290.1.6211317a	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Ca_11305	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
rna-XM_014637737.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
rna-XM_004502290.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
rna-TanjilR_32988	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Vigun01g243100.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Vfaba.Hedin2.R1.2g113680.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Cr_13057.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
jg53612.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vfaba.Tiffany.R1.2g093280.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
Vum_04G03186.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Psat5g093400.1	Pisum sativum Cameor genome v1a	Pisum sativum
Va03G084760.2	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Phvul.001G257500.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
LR48_mrnaVigan03g311700	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Cc_v2.0_00135.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-KK1_019927	gene-KK1_019927_Cc_Asha_v1.0	Cajanus cajan	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
rna-KK1_019927_Cc_Asha_v1.0	rna-KK1_019927_Cc_Asha_v1.0	Cajanus cajan	polypeptide
rna-KK1_019927	rna-KK1_019927_Cc_Asha_v1.0-protein	Cajanus cajan	polypeptide

The following exon feature(s) are a part of this mRNA:

The following CDS feature(s) are a part of this mRNA:

Homology

[Close]

BLAST of rna-KK1_019927 vs. DB:Swiss
Match: RGS1_ARATH (Regulator of G-protein signaling 1 OS=Arabidopsis thaliana OX=3702 GN=RGS1 PE=1 SV=1)

HSP 1 Score: 508.064 bits (1307), Expect = 7.933e-178
Identity = 264/392 (67.35%), Postives = 321/392 (81.89%), Query Frame = 1

Query:   10 CAVEGGCPSDYVAIALSIFSFIVLLLWSIFPFLVHKVPRTKGSGFWIPVIQVVASFNLLLSIVMSNNYLKFGKRNWLQSCYLWGVWGEAPLGFGLLLSCRITQASQLYFIFVKRRLPLIKSYIFLPLILLPWTAIAAVIHLMRPLSSRCHMRAQWTIPVVCFHSLYVAILVVVTAAVHHIEFRFDELKDLWRGILVSAVSIAVWVTAYILNEIYDNISWLEVASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESREFRTMSQALGIPDSGVLTQSEPISRVDPNEPLDKLLLNKRFRQSFMAFADSCLAGESVHFFDEVYELSKIPEDDCVRRIYMARHIIEKYIVAGAAMEVNISHRSRQEILLTSNLARPDLFHSALNEIIQLMR 1185
            CA+ GGCPSDYVA+A+S+  F VLL  S+ P L+HK PRT  S FWIPVIQV++SFNLL SI+MS N L+F  ++W + CYLW VW E PLGFGLL+SCRITQA QLYFIFVK+RLP +KSYIFLPL+LLPW   AA+IH  +PL+ +CHM  QWT PV   H+LYV  L+  T AV H+EFRFDEL+DLW+GILVSA SI +WVTA++LNEI++ ISWL+VASRF+LLV   ILVV FFSISS+QPLLSQISL++R++ EF+ M QALGIPDSG+L + E    VDPNEPLDKLLLNKRFR SFM FADSC AGE++HFF+EVYE  KIPEDD +RRIYMARHI+EK+IVAGA ME+N+SH++RQEIL T +L   DLF +ALNE++QL++
Sbjct:    5 CALHGGCPSDYVAVAISVICFFVLLSRSVLPCLIHKAPRTNSSSFWIPVIQVISSFNLLFSIMMSVNLLRFRTKHWWRYCYLWAVWIEGPLGFGLLMSCRITQAFQLYFIFVKKRLPPVKSYIFLPLVLLPWIFGAAIIHATKPLNDKCHMGLQWTFPVAGLHALYVLALIAFTRAVRHVEFRFDELRDLWKGILVSATSIVIWVTAFVLNEIHEEISWLQVASRFVLLVTGGILVVVFFSISSNQPLLSQISLKKRQNFEFQRMGQALGIPDSGLLFRKEEFRPVDPNEPLDKLLLNKRFRHSFMEFADSCYAGETLHFFEEVYEHGKIPEDDSIRRIYMARHIMEKFIVAGAEMELNLSHKTRQEILTTQDLTHTDLFKNALNEVMQLIK 396

The following BLAST results are available for this feature:

BLAST of rna-KK1_019927 vs. DB:Swiss

BLAST of rna-KK1_019927 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot)
Total hits: 1


Match Name	E-value	Identity	Description
RGS1_ARATH	7.933e-178	67.35	Regulator of G-protein signaling 1 OS=Arabidopsis ...	[more]

InterPro

Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016137	RGS domain	SMART	SM00315	RGS_3	coord: 294..404 e-value: 3.5E-12 score: 56.5
IPR016137	RGS domain	PFAM	PF00615	RGS	coord: 295..396 e-value: 9.9E-11 score: 42.0
IPR016137	RGS domain	PROSITE	PS50132	RGS	coord: 294..395 score: 14.18
None	No IPR available	GENE3D	1.20.58.1850		coord: 284..399 e-value: 5.5E-18 score: 66.8
IPR036305	RGS domain superfamily	SUPERFAMILY	48097	Regulator of G-protein signaling, RGS	coord: 295..395

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_1-CM003603.1:1809738..1815196+
coding sequence from alignment at Chr_1-CM003603.1:1809738..1815196+

mRNA sequence

>rna-KK1_019927_Cc_Asha_v1.0 ID=rna-KK1_019927_Cc_Asha_v1.0; Name=rna-KK1_019927; organism=Cajanus cajan; type=mRNA; length=1335bp
ATGGTGAGATGTGCCGTGGAAGGAGGTTGCCCCAGTGACTATGTAGCCAT
TGCCCTATCCATCTTTTCTTTCATTGTGCTTCTCTTGTGGTCAATATTTC
CCTTCCTAGTTCACAAGGTTCCTCGAACCAAAGGCAGTGGCTTCTGGATA
CCTGTAATTCAAGTTGTTGCCAGCTTCAACCTACTTCTATCAATTGTGAT
GTCAAATAATTACTTGAAATTTGGAAAGAGAAATTGGTTGCAGTCGTGCT
ACCTATGGGGAGTCTGGGGTGAAGCTCCACTTGGGTTCGGTTTGTTGTTG
AGCTGCCGCATAACACAAGCTTCACAATTATATTTTATCTTTGTCAAGAG
GCGTTTGCCACTGATAAAATCATATATTTTTCTTCCACTTATTCTACTTC
CCTGGACTGCTATTGCTGCTGTTATCCATTTGATGAGGCCTCTAAGCAGT
CGCTGTCACATGAGAGCTCAATGGACCATCCCAGTTGTATGTTTCCATTC
ATTGTACGTTGCGATTTTGGTTGTGGTTACAGCTGCTGTTCATCATATAG
AGTTCAGGTTTGATGAACTCAAAGACCTCTGGCGGGGAATACTTGTATCA
GCCGTGTCCATTGCTGTGTGGGTTACTGCTTACATACTAAATGAAATTTA
TGACAATATCTCATGGCTTGAAGTTGCCTCCAGATTTCTGCTTTTAGTTG
TGGCAAGCATACTTGTGGTGGCTTTCTTTTCAATATCAAGTTCACAACCA
CTTCTCTCACAAATCAGCTTGAGGAGAAGAGAATCTAGAGAATTTCGCAC
AATGAGCCAGGCTCTTGGAATACCTGATAGTGGGGTATTAACACAAAGTG
AGCCAATTTCAAGGGTAGATCCTAATGAACCGTTGGATAAGCTTCTATTG
AATAAAAGATTCCGGCAGTCTTTTATGGCATTTGCTGATAGTTGCTTGGC
TGGGGAAAGTGTGCACTTCTTTGACGAAGTATATGAGCTTAGTAAAATAC
CTGAAGATGACTGTGTGAGAAGGATCTATATGGCACGACATATTATTGAG
AAATACATAGTAGCAGGTGCGGCTATGGAGGTGAACATCTCTCATAGAAG
CAGACAAGAAATATTGTTAACTTCCAACCTCGCACGTCCTGATCTCTTCC
ACAGTGCACTTAATGAGATCATTCAGTTGATGAGAACAGCAAAATCTGGC
GCGAGATTACTGGTCTTCAATGTTCTTCCTGAAGTTCCAGGAAGAATCCA
ATGTAAGATCAAATGGGTACGAGCTGGAGCAAATGACAGGGTGGAACTTT
TCTCCAAGGTTGAGTTCTGTGCATGGTACAGATGA

protein sequence of rna-KK1_019927_Cc_Asha_v1.0

>rna-KK1_019927_Cc_Asha_v1.0 ID=rna-KK1_019927_Cc_Asha_v1.0; Name=rna-KK1_019927_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=444bp
MVRCAVEGGCPSDYVAIALSIFSFIVLLLWSIFPFLVHKVPRTKGSGFWI
PVIQVVASFNLLLSIVMSNNYLKFGKRNWLQSCYLWGVWGEAPLGFGLLL
SCRITQASQLYFIFVKRRLPLIKSYIFLPLILLPWTAIAAVIHLMRPLSS
RCHMRAQWTIPVVCFHSLYVAILVVVTAAVHHIEFRFDELKDLWRGILVS
AVSIAVWVTAYILNEIYDNISWLEVASRFLLLVVASILVVAFFSISSSQP
LLSQISLRRRESREFRTMSQALGIPDSGVLTQSEPISRVDPNEPLDKLLL
NKRFRQSFMAFADSCLAGESVHFFDEVYELSKIPEDDCVRRIYMARHIIE
KYIVAGAAMEVNISHRSRQEILLTSNLARPDLFHSALNEIIQLMRTAKSG
ARLLVFNVLPEVPGRIQCKIKWVRAGANDRVELFSKVEFCAWYR

mRNA from alignment at Chr_1-CM003603.1:1809738..1815196+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>rna-KK1_019927_Cc_Asha_v1.0 ID=rna-KK1_019927_Cc_Asha_v1.0; Name=rna-KK1_019927; organism=Cajanus cajan; type=mRNA; length=5459bp; location=Sequence derived from: Chr_1-CM003603.1:1809738..1815196+ (Cajanus cajan
ATGGTGAGATGTGCCGTGGAAGGAGGTTGCCCCAGTGACTATGTAGCCAT
TGCCCTATCCATCTTTTCTTTCATTGTGTAagcttctctctttttctctt
tcttttttcagcCAAATTTCACACTAAACTATAATTGCCCCTATCCATGT
AATGGCTCATTGTTATTGTGCCAAATTGGCCACTCCTATGCCTGTATGAT
GTCATGACCATGTAAATTTTGAGCTCTGATTAAGAAGTTATGATGTTATT
TATATGCCCTTAACCCCTTGCTATTTCAAGTTAGTTTCCCACCATGCCCa
tgaattaaaaacttttttttttccctatctGATCTGCTTATTGATTAAAG
GAGTTTCCTTGGTTGGGCTCTCTCTTTGATGAATCATGTGATTCCTGTGT
TGGGTGATTTAGTTTACCCTTTACTATCTGTTTGGATAAACCATTAAACC
TCCTCATAAACACCTTTAAGAGAAcaaaataaggagaaaaaatgaaataa
gtttttccataggttaaaattagtttattcataagttaaaattaagattt
tgaagaagCTAATAGCAGAGAGTTTCTACAAATTAggttatgtataagtt
aattttagtttatggagaaacttattttatttttctttcttatttttctc
tcctaaaagtGCTCTTGGAGAAGTTTAATCAAACAAACCTTTAGTCTTAT
CTTATAAGTATCATTTTAGTATCAGTATAACCAAGAAACATCTGGGGCTT
CTATTTGGCACCCAACTAATCCATATCCCATCAGGTTGGCCTACTTAGGA
GTAAAATGGTATTTCCGGTGATAATTTCatttgtttcaaaattattaata
tataaagaaaactaTGTGACATTTGTTTTCTTATGCATAAGCTATTGATT
GGTTTCTATCTTTCAGGCTTCTCTTGTGGTCAATATTTCCCTTCCTAGTT
CACAAGGTTCCTCGAACCAAAGGCAGTGGCTTCTGGATACCTGTAATTCA
AGTTGTTGCCAGCTTCAACCTACTTCTATCAATTGTGGTAGAAATAagtt
ctttatctctttttcatttattttctttgacaacTTTAGAAACATCCCTA
TTTGAGTTGTTCGGTGGTACCGTAGTATCAGCTCAGCATTGCCTTGTTCT
CTCAAGCTTAGCTAtcctatatttgttttttatgcaGATGTCAAATAATT
ACTTGAAATTTGGAAAGAGAAATTGGTTGCAGTCGTGCTACCTATGGGGA
GGTTATCCTTCTTTtgtttatacatacatattgaAAAGATGAATTCTTGT
TAGTATAACCATGCTTTTCATGTTTATTTCAGTCTGGGGTGAAGCTCCAC
TTGGGTTCGGTTTGTTGTTGAGCTGCCGCATAACACAAGCttcacaatta
tattttatctttgtcAAGTAAGTGACAACTTGATATTAAGTTTTTAGACC
ATATTGGTGCAAGTTGCTGCCTCTATACCGATTAAATGACTTAAGGGTGT
GTTTGggtaaacaacttaattaagtGCTTATTGGGCAAGTGTTTATCATG
TAAGCATTGTTGTATAAGTTATTTCTATAATTGAATAGAAAATAggatta
aattctttttatataaactgTAAGTTGTTTTCATAAGGTATATCTATAGA
GCTTActgaaataagttaaaaaagcCTTATGAATAGATTATAAGCTATTT
CCATAAGTTCTTCCAAATATTTATACGAGTGATTAATTATGCTATGAGAT
ATGActaaataaactttatttaagtTCTTCCAAATGTACCCTAAAGTTCA
TCATCCGTAGCTTAAAGCAGTTAATCTGTATTTTCCTCCACTGTAGCACA
CAGCACACAGCCTGTTAAATGTATTATCATAACATTCTGTTTGTCCGAAT
GGTTTTATGGTGAAACTACTATCCACTTGAGCTCATGGAGGCTTGTGGAT
TTTTTATTGATGTGATTATTTGCAGGCATTATTGACCATAATTAATTGGC
ACTTTGCCTGTTACTTCAAGaagcttcaattttttttttaatttttagtt
ttttttttttttggtactcACTGCAATTCTTAACCAGTACTAAAGGAGTT
ATCACCCATTTCTGACCTGTAttcaatttctttctttattaatCTTTCAG
GAGGCGTTTGCCACtgataaaatcatatatttttcttccacTTATTCTAC
TTCCCTGGACTGCTATTGCTGCTGGTAAGActgaattaatttagttttac
ttGTTGCCGTAGTTTTTATTACATAGAATTTACTACTTGAAGTAGAGGTA
ACTGGTGTAAGTTTATCATTATTATCCATAGAACTTCATTTCTTTTGATC
TCTTCTTatcttatatttcaaaattttgctGGACTTTGTCTCTTTAGTTG
AATCAgttattatgtttttaagtGTTTCTGCTTTGTGTCCATGATTTTCT
CAACATCTTTTGGAATTTCTGTAAATGATTACCAGGACCCACTCCCCTAT
CTTGTCCTAGCCCTGTCTCTTTTGTTTGCTTTCCTTccattatttatttc
taataaaactATTTGTTCATGCTATAGTTATCCATTTGATGAGGCCTCTA
AGCAGTCGCTGTCACATGAGAGCTCAATGGACCATCCCAGTTGTATGTTT
CCATTCATTGTACGTTGCGATTTTGGTTGTGGTTACAGCTGCTGTTCATC
ATATAGAGTTCAGGTTTGATGAACTCAAAGACCTCTGGCGGGGAATACTT
GTATCAGCCGTGTCCATTGGTACACTTTTTCCTAGGTTTTATAAGAAACT
CCtctatttctctattttcttttctgaaGTTCCTAGCTTCCTACTAACCA
GTGAGGTTGTTGTTAAGGTTATTGAATTCACCATTAAGTCGATAATTATT
CAGGTTTTTAGCAAATAAATTTCCTATCTAAATGAGTAACattcaagtta
aaaaaaattgatgccAAAATTAATGTTAGCTCATTGATGCATATTTTCAA
ATGTTATAGATATCGCATATTCCTTAACTAGTGTGTTTAGGGAATTTGCA
GAAGCTTTACCCTAAATACATGATAGTTTACTTTCTGAAAAGAGATTCTA
TACTATGTAGTCTCTTAATTAGCCAcattttctttaatcaaatttaacta
TGGCCTGCTGGACTAAAAACAACTGATATTCATTTTTGCATTGGCTGATC
CTATATCCACTTAGTTATTTTCAAactattgttataaatataaaatatga
gctTGGATATTTTCTGGATGGCTTATCTCAGCAGCCTCAATAATTTAACC
TTTGCTCATTTATTCTGGCAGCTGTGTGGGTTACTGCTTACatactaaat
gaaatttatgACAATATCTCATGGCTTGAAGTTGCCTCCAGATTTCTGCT
TTTAGTTGTGGTATGCTTTCCTACTGCTTCTTGTGTTCCATAACTATGAA
ACGACAGATATTTTTAGAGTCTGTTTGGATAAAAAGGTTAAAAGAGTTTT
TGAGAGCTTCTCAACTGGggaaaaaaactatttttaattgagAAACTGTC
AAAAACTCCTTtaaacttgtatccaaatagACCCTTAATAGATTCAAAGT
TAAAATCCAAGTCATTatgttgtgaattttttatttacttccaTTCTCTG
TTGGTTTTATTTAAAGGCAAGCATACTTGTGGTGGCTTTCTTTTCAATAT
CAAGTTCACAACCACTTCTCTCACAAATCAGCTTGAGGAGAAGAGAATCT
AGAGAATTTCGCACAATGAGCCAGGCTCTTGGAATACCTGATAGTGGGGT
ATTAACACAAAGTGAGCCAATTTCAAGGGTAGATCCTAATGAACCGTTGG
ATAAGCTTCTATTGAATAAAAGATTCCGGCAGTCTTTTATGGCATTTGCT
GATAGGTAAAGTAACCTTCTTGTGTTTCCAGTATGTTGGCACTTGGCAGA
CATTTGAAAGAACTATGTTTTCTCTTCACTTTAAGAAATGACATATTTGA
AAGAAACAATTCCGACAAAATGAGTAATATTTTCTACACATTAAATGGAA
GATAACAGATGTTAAATTTGCACAATGAAATCTTGGTTAAGAATGAATCC
TTTCTACTCTTGTCCCACAAGGTCCGGAAAGTGTTGGACCTAAACAtcaa
aattgaagcaaaaaaatgcattttttttttgtcttgtttgaaattaaaaa
agtaatattgttttaatactTACAGTTGCTTGGCTGGGGAAAGTGTGCAC
TTCTTTGACGAAGTATATGAGCTTAGTAAAATACCTGAAGATGACTGTGT
GAGAAGGATCTATATGGCACGACATATTATTGAGAAATACATAGTAGCAG
GTTTGTAATTCTAATTCCAGGTGGCTTCCTTCTTTCATCCTAtcccttgt
tttttttttccatgatgCCCAGTTTTTGCAATATTCAAAATTGCAGGATA
AGTTTTCTCAGTCCTTTTATGTGTCTGTTTGAATATAAAACAGAAGTACT
TTTAGCAGTTCttctattgaattttttttattttattttcaattgagaAG
TTCTCAAAAACTCTTCTAAGCTTGTacttaaatagattttatgaACACTG
CTATTTGATTTAGACACAGTTGCTTGTCTCGTCTATGGTGTTCTGGTGAA
TGACTCGGAGTACCAAGAGttgtaggagaaaaaaaatcccATGCTTGCCA
TCTTTGCTTCCCAATTTGGGGCACTTTGTTTAATATTGGCTGGAATGTAA
TTTCACAGGTGCGGCTATGGAGGTGAACATCTCTCATAGAAGCAGACAAG
AAATATTGTTAACTTCCAACCTCGCACGTCCTGATCTCTTCCACAGTGCA
CTTAATGAGATCATTCAGTTGATGAGAACAGCAAGTTCCTTAGATTCAAA
AGCCCTTGATTAGAATTGATTAATGATATATACTCGCATATCATCCTCCT
AACAATGCTCTCAACTCTTCATAAAGAAaatgttgatgaatatctagaaG
ACATAAAAGCATTATGTTATGTAGCGATTTAAGATCAGAGAAAATAGGTT
ATGCACTAATGTTATATATTAGTTTGACATTGTTATCCAATCATAAACCA
CCATGTACGGTGACTTTATTGGCTTTAacaattaataactaaaaagtaaa
aattcatACTGATGGTAAAATGTAATTGAATCATTGAATGacaatataaa
agtatttttgtatTGTTAGTGTATAACCATTAAGCTCTTAGGATCTTAAG
ATTGTTCCTTAAAATTAGTCTGACCATGGATGTATAATTTTAACCTAAAA
CATTTCACTTGTGCAGAATCTGGCGCGAGATTACTGGTCTTCAATGTTCT
TCCTGAAGTTCCAGGAAGAATCCAATGTAAGATCAAATGGGTACGAGCTG
GAGCAAATGACAGGGTGGAACTTTTCTCCAAGGTTGAGTTCTGTGCATGG
TACAGATGA

Coding sequence (CDS) from alignment at Chr_1-CM003603.1:1809738..1815196+

>rna-KK1_019927_Cc_Asha_v1.0 ID=rna-KK1_019927_Cc_Asha_v1.0; Name=rna-KK1_019927; organism=Cajanus cajan; type=CDS; length=2670bp; location=Sequence derived from: Chr_1-CM003603.1:1809738..1815196+ (Cajanus cajan
ATGGTGAGATGTGCCGTGGAAGGAGGTTGCCCCAGTGACTATGTAGCCAT
TGCCCTATCCATCTTTTCTTTCATTGTATGGTGAGATGTGCCGTGGAAGG
AGGTTGCCCCAGTGACTATGTAGCCATTGCCCTATCCATCTTTTCTTTCA
TTGTGCTTCTCTTGTGGTCAATATTTCCCTTCCTAGTTCACAAGGTTCCT
CGAACCAAAGGCAGTGGCTTCTGGATACCTGTAATTCAAGTTGTTGCCAG
CTTCAACCTACTTCTATCAATTGTGGCTTCTCTTGTGGTCAATATTTCCC
TTCCTAGTTCACAAGGTTCCTCGAACCAAAGGCAGTGGCTTCTGGATACC
TGTAATTCAAGTTGTTGCCAGCTTCAACCTACTTCTATCAATTGTGATGT
CAAATAATTACTTGAAATTTGGAAAGAGAAATTGGTTGCAGTCGTGCTAC
CTATGGGGAGATGTCAAATAATTACTTGAAATTTGGAAAGAGAAATTGGT
TGCAGTCGTGCTACCTATGGGGAGTCTGGGGTGAAGCTCCACTTGGGTTC
GGTTTGTTGTTGAGCTGCCGCATAACACAAGCttcacaattatattttat
ctttgtcAATCTGGGGTGAAGCTCCACTTGGGTTCGGTTTGTTGTTGAGC
TGCCGCATAACACAAGCttcacaattatattttatctttgtcAAGAGGCG
TTTGCCACtgataaaatcatatatttttcttccacTTATTCTACTTCCCT
GGACTGCTATTGCTGCTGGAGGCGTTTGCCACtgataaaatcatatattt
ttcttccacTTATTCTACTTCCCTGGACTGCTATTGCTGCTGTTATCCAT
TTGATGAGGCCTCTAAGCAGTCGCTGTCACATGAGAGCTCAATGGACCAT
CCCAGTTGTATGTTTCCATTCATTGTACGTTGCGATTTTGGTTGTGGTTA
CAGCTGCTGTTCATCATATAGAGTTCAGGTTTGATGAACTCAAAGACCTC
TGGCGGGGAATACTTGTATCAGCCGTGTCCATTGTTATCCATTTGATGAG
GCCTCTAAGCAGTCGCTGTCACATGAGAGCTCAATGGACCATCCCAGTTG
TATGTTTCCATTCATTGTACGTTGCGATTTTGGTTGTGGTTACAGCTGCT
GTTCATCATATAGAGTTCAGGTTTGATGAACTCAAAGACCTCTGGCGGGG
AATACTTGTATCAGCCGTGTCCATTGCTGTGTGGGTTACTGCTTACatac
taaatgaaatttatgACAATATCTCATGGCTTGAAGTTGCCTCCAGATTT
CTGCTTTTAGTTGTGCTGTGTGGGTTACTGCTTACatactaaatgaaatt
tatgACAATATCTCATGGCTTGAAGTTGCCTCCAGATTTCTGCTTTTAGT
TGTGGCAAGCATACTTGTGGTGGCTTTCTTTTCAATATCAAGTTCACAAC
CACTTCTCTCACAAATCAGCTTGAGGAGAAGAGAATCTAGAGAATTTCGC
ACAATGAGCCAGGCTCTTGGAATACCTGATAGTGGGGTATTAACACAAAG
TGAGCCAATTTCAAGGGTAGATCCTAATGAACCGTTGGATAAGCTTCTAT
TGAATAAAAGATTCCGGCAGTCTTTTATGGCATTTGCTGATAGGCAAGCA
TACTTGTGGTGGCTTTCTTTTCAATATCAAGTTCACAACCACTTCTCTCA
CAAATCAGCTTGAGGAGAAGAGAATCTAGAGAATTTCGCACAATGAGCCA
GGCTCTTGGAATACCTGATAGTGGGGTATTAACACAAAGTGAGCCAATTT
CAAGGGTAGATCCTAATGAACCGTTGGATAAGCTTCTATTGAATAAAAGA
TTCCGGCAGTCTTTTATGGCATTTGCTGATAGTTGCTTGGCTGGGGAAAG
TGTGCACTTCTTTGACGAAGTATATGAGCTTAGTAAAATACCTGAAGATG
ACTGTGTGAGAAGGATCTATATGGCACGACATATTATTGAGAAATACATA
GTAGCAGTTGCTTGGCTGGGGAAAGTGTGCACTTCTTTGACGAAGTATAT
GAGCTTAGTAAAATACCTGAAGATGACTGTGTGAGAAGGATCTATATGGC
ACGACATATTATTGAGAAATACATAGTAGCAGGTGCGGCTATGGAGGTGA
ACATCTCTCATAGAAGCAGACAAGAAATATTGTTAACTTCCAACCTCGCA
CGTCCTGATCTCTTCCACAGTGCACTTAATGAGATCATTCAGTTGATGAG
AACAGCAAGTGCGGCTATGGAGGTGAACATCTCTCATAGAAGCAGACAAG
AAATATTGTTAACTTCCAACCTCGCACGTCCTGATCTCTTCCACAGTGCA
CTTAATGAGATCATTCAGTTGATGAGAACAGCAAAATCTGGCGCGAGATT
ACTGGTCTTCAATGTTCTTCCTGAAGTTCCAGGAAGAATCCAATGTAAGA
TCAAATGGGTACGAGCTGGAGCAAATGACAGGGTGGAACTTTTCTCCAAG
GTTGAGTTCTGTGCATGGTACAGATGAAATCTGGCGCGAGATTACTGGTC
TTCAATGTTCTTCCTGAAGTTCCAGGAAGAATCCAATGTAAGATCAAATG
GGTACGAGCTGGAGCAAATGACAGGGTGGAACTTTTCTCCAAGGTTGAGT
TCTGTGCATGGTACAGATGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR016137	RGS
IPR036305	RGS_sf

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