rna-KK1_034441
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-KK1_034441 vs. DB:Swiss
Match: ADF5_ARATH (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana OX=3702 GN=ADF5 PE=1 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.411e-76 Identity = 110/132 (83.33%), Postives = 116/132 (87.88%), Query Frame = 1 Query: 1 MWVTDECKSSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTEGYDDLTASLPSDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIRDIAK 396 M VTDEC SSFMDMKWKK HRYIVFKI+E SR VTVDK+GG E Y DL SLP DDCRYAVFDFDFVTVDNCRKSKIFFIAWSP AS+IRAKILYATSKDGLRR L+GI YELQATDPTEMGFD+I+D AK Sbjct: 12 MRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQDRAK 143
BLAST of rna-KK1_034441 vs. DB:Swiss
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana OX=3702 GN=ADF9 PE=2 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 5.813e-73 Identity = 100/132 (75.76%), Postives = 113/132 (85.61%), Query Frame = 1 Query: 1 MWVTDECKSSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTEGYDDLTASLPSDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIRDIAK 396 MW+TD+CK SFM+MKWKK HRY+V+K++E SR VTVDK+G E YDDL ASLP DDCRYAVFDFD+VTVDNCR SKIFFI WSP ASRIR K++YATSK GLRR LDG+ YELQATDPTEMGFD I+D AK Sbjct: 10 MWMTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDRAK 141
BLAST of rna-KK1_034441 vs. DB:Swiss
Match: ADF5_ORYSJ (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF5 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 5.211e-72 Identity = 99/132 (75.00%), Postives = 116/132 (87.88%), Query Frame = 1 Query: 1 MWVTDECKSSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTEGYDDLTASLPSDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIRDIAK 396 M V +EC+ FM+MKWKK HR++V+KIDE SR V VDK+GGP EGY++L A+LP+DDCRYAVFDFDFVTVDNC+KSKIFFIAWSPTASRIRAKILYATSK GLRR LDG+ YE+QATD +EMG+DVIR A+ Sbjct: 12 MNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQATDSSEMGYDVIRGRAQ 143
BLAST of rna-KK1_034441 vs. DB:Swiss
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 8.156e-60 Identity = 83/132 (62.88%), Postives = 104/132 (78.79%), Query Frame = 1 Query: 1 MWVTDECKSSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTEGYDDLTASLPSDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIRDIAK 396 M V DE K++F++++ KK HRY+VFKIDE + V V+K G PTE YDD ASLP +DCRYAV+DFDFVT +NC+KSKIFF AWSP+ S IRAK+LY+TSKD L R L GI YE+QATDPTE+ +V+R+ A Sbjct: 15 MGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERAN 146
BLAST of rna-KK1_034441 vs. DB:Swiss
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana OX=3702 GN=ADF8 PE=2 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 2.669e-58 Identity = 78/128 (60.94%), Postives = 103/128 (80.47%), Query Frame = 1 Query: 1 MWVTDECKSSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTEGYDDLTASLPSDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIR 384 M V DECK F+++K K+ +R+IVFKIDE ++ V ++KLG P E YDD T+S+P D+CRYAV+DFDF T DNC+KSKIFFIAWSP SR+R+K+LYA+SKD +R ++GI ELQATDP+EM D+I+ Sbjct: 8 MHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIK 135
BLAST of rna-KK1_034441 vs. DB:Swiss
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 4.048e-58 Identity = 78/128 (60.94%), Postives = 103/128 (80.47%), Query Frame = 1 Query: 1 MWVTDECKSSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTEGYDDLTASLPSDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIR 384 M V+DECK F+++K K+ +R+IVFKIDE ++ V +DKLG P E Y+D T S+P D+CRYAV+D+DF T +NC+KSKIFFIAWSP SR+R+K+LYA+SKD +R LDGI ELQATDP+EM D+I+ Sbjct: 8 MHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIK 135
BLAST of rna-KK1_034441 vs. DB:Swiss
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 2.072e-57 Identity = 77/131 (58.78%), Postives = 103/131 (78.63%), Query Frame = 1 Query: 1 MWVTDECKSSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTEGYDDLTASLPSDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIRDIA 393 M V D+CK F+++K K+ HR+IV+KI+E + V V+K+G PTE Y+D ASLP ++CRYAV+DFDFVT +NC+KS+IFFIAW P +R+R+K++YA+SKD +R LDGI ELQA DPTEMG DVI+ A Sbjct: 8 MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRA 138
BLAST of rna-KK1_034441 vs. DB:Swiss
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF1 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 2.165e-57 Identity = 80/131 (61.07%), Postives = 103/131 (78.63%), Query Frame = 1 Query: 1 MWVTDECKSSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTEGYDDLTASLPSDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIRDIA 393 M V DECK F+++K K+ R+IVFKI+E + V VD+LG P E YDD TA LP+D+CRYAVFDFDFVT +NC+KSKIFFI+W+P SR+R+K+LYA+SKD +R LDGI ELQATDP+EM D+++ A Sbjct: 8 MAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSRA 138
BLAST of rna-KK1_034441 vs. DB:Swiss
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 5.033e-57 Identity = 79/128 (61.72%), Postives = 101/128 (78.91%), Query Frame = 1 Query: 1 MWVTDECKSSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTEGYDDLTASLPSDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIR 384 M V DECK FM++K K+ R+IVFKI+E + VTV++LG P E YDD T LP ++CRYAVFDFDFVT +NC+KSKIFFI+WSP SR+R+K+LYA++KD +R LDGI ELQATDP+EM D+I+ Sbjct: 8 MAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECLPPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVELQATDPSEMSMDIIK 135
BLAST of rna-KK1_034441 vs. DB:Swiss
Match: ADF7_ARATH (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.238e-56 Identity = 80/131 (61.07%), Postives = 105/131 (80.15%), Query Frame = 1 Query: 1 MWVTDECKSSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTEGYDDLTASLPSDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIRDIA 393 M V DECK F+++K K+ +R+I+F+ID + V V+KLG P E YDD TASLP+++CRYAVFDFDF+T +NC+KSKIFFIAWSP +SR+R K++YA+SKD +R LDGI ELQATDP+EM FD+I+ A Sbjct: 8 MAVEDECKLKFLELKSKRNYRFIIFRID--GQQVVVEKLGNPDETYDDFTASLPANECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKSRA 136 The following BLAST results are available for this feature:
BLAST of rna-KK1_034441 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-KK1_034441_Cc_Asha_v1.0 ID=rna-KK1_034441_Cc_Asha_v1.0; Name=rna-KK1_034441; organism=Cajanus cajan; type=mRNA; length=399bpback to top protein sequence of rna-KK1_034441_Cc_Asha_v1.0 >rna-KK1_034441_Cc_Asha_v1.0 ID=rna-KK1_034441_Cc_Asha_v1.0; Name=rna-KK1_034441_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=132bpback to top mRNA from alignment at Scaffold000015-KQ483641.1:97559..98028- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-KK1_034441_Cc_Asha_v1.0 ID=rna-KK1_034441_Cc_Asha_v1.0; Name=rna-KK1_034441; organism=Cajanus cajan; type=mRNA; length=470bp; location=Sequence derived from: Scaffold000015-KQ483641.1:97559..98028- (Cajanus cajanback to top Coding sequence (CDS) from alignment at Scaffold000015-KQ483641.1:97559..98028- >rna-KK1_034441_Cc_Asha_v1.0 ID=rna-KK1_034441_Cc_Asha_v1.0; Name=rna-KK1_034441; organism=Cajanus cajan; type=CDS; length=798bp; location=Sequence derived from: Scaffold000015-KQ483641.1:97559..98028- (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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