rna-KK1_026345
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-KK1_026345 vs. DB:Swiss
Match: MRS2B_ARATH (Magnesium transporter MRS2-11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MRS2-11 PE=1 SV=1) HSP 1 Score: 420.624 bits (1080), Expect = 6.928e-146 Identity = 237/289 (82.01%), Postives = 269/289 (93.08%), Query Frame = 1 Query: 1 MTNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDYNRIGGKAFLETLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLDALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRMCIMGRNCTLNKGNDDMECSVPLEKQIAXXXXXXXXXXXXNYLQRCESCHGQAERLLDSAREMEDSIXXXXXXXXXXXXXXXXXXQVGTFCVAIGALVAGIFGMNLKSYLEEHVFAFWLTTAXXXXXXXXAFFLMYYYLRARKIF 867 MTNS+P+LLVRE+AILLNLGSLRAIAM+D VLIFDYNR GG+AF++TL+PRLNP++ NGGPSMPFE+E VE+AL+SRIQRLEQRLMD+EPRVQALL+ LPNRLT DILE+LRISKQ LVELGS+AGALRQMLLDLLEDPHEIRR+CIMGRNCTL +G+DD+EC++P +K IAEEEEEEIEMLLENYLQRCESCHGQAERLLDSA+EMEDSI+V+LSSRRLEVSR ELLLQVGTFCVA+GAL+AGIFGMNL+SYLEE AFWLTT GII+G +AFFLMY YL RKIF Sbjct: 171 MTNSVPSLLVREHAILLNLGSLRAIAMRDRVLIFDYNRRGGRAFVDTLMPRLNPRSMNGGPSMPFELEAVESALISRIQRLEQRLMDIEPRVQALLEVLPNRLTADILEELRISKQRLVELGSRAGALRQMLLDLLEDPHEIRRICIMGRNCTLRRGDDDLECTLPSDKLIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRFELLLQVGTFCVAVGALIAGIFGMNLRSYLEEQASAFWLTTGGIIIGAAVAFFLMYSYLSRRKIF 459
BLAST of rna-KK1_026345 vs. DB:Swiss
Match: MRS2A_ORYSJ (Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MRS2-A PE=2 SV=1) HSP 1 Score: 405.986 bits (1042), Expect = 6.764e-140 Identity = 231/289 (79.93%), Postives = 264/289 (91.35%), Query Frame = 1 Query: 1 MTNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDYNRIGGKAFLETLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLDALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRMCIMGRNCTLNKGNDDMECSVPLEKQIAXXXXXXXXXXXXNYLQRCESCHGQAERLLDSAREMEDSIXXXXXXXXXXXXXXXXXXQVGTFCVAIGALVAGIFGMNLKSYLEEHVFAFWLTTAXXXXXXXXAFFLMYYYLRARKIF 867 + NSMP+LLVRE AIL+NLGSLRAIAM + VLIF+YN GGKAFL++LLPRLNP+N NGGP+MPF++EVVEAALLSRIQRLE+RLM +EPRV ALL+ LPNRLT D+LEQLR+SKQ LVELGS+AG L+QML+DLL+DPHEIRR+CIMGRNCTL+K +D+MECSVPLEKQIAEEEEEEIEMLLENYLQRCES HGQAERLLDSAREMEDSI+V+LSSRRLEVSRVELLLQVGTFCVAIGAL+AGIFGMNLKSYLE + +AFW TT GI+VG + FF+MY YL+ RKI Sbjct: 186 LMNSMPSLLVREQAILVNLGSLRAIAMHERVLIFNYNSPGGKAFLDSLLPRLNPRNINGGPAMPFQLEVVEAALLSRIQRLERRLMRIEPRVGALLEVLPNRLTADVLEQLRLSKQALVELGSRAGDLKQMLIDLLDDPHEIRRICIMGRNCTLDKLSDNMECSVPLEKQIAEEEEEEIEMLLENYLQRCESIHGQAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAIGALIAGIFGMNLKSYLETNAWAFWATTGGIVVGAVAGFFIMYSYLKTRKIL 474
BLAST of rna-KK1_026345 vs. DB:Swiss
Match: MRS2A_ORYSI (Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=MRS2-A PE=3 SV=1) HSP 1 Score: 405.986 bits (1042), Expect = 6.764e-140 Identity = 231/289 (79.93%), Postives = 264/289 (91.35%), Query Frame = 1 Query: 1 MTNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDYNRIGGKAFLETLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLDALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRMCIMGRNCTLNKGNDDMECSVPLEKQIAXXXXXXXXXXXXNYLQRCESCHGQAERLLDSAREMEDSIXXXXXXXXXXXXXXXXXXQVGTFCVAIGALVAGIFGMNLKSYLEEHVFAFWLTTAXXXXXXXXAFFLMYYYLRARKIF 867 + NSMP+LLVRE AIL+NLGSLRAIAM + VLIF+YN GGKAFL++LLPRLNP+N NGGP+MPF++EVVEAALLSRIQRLE+RLM +EPRV ALL+ LPNRLT D+LEQLR+SKQ LVELGS+AG L+QML+DLL+DPHEIRR+CIMGRNCTL+K +D+MECSVPLEKQIAEEEEEEIEMLLENYLQRCES HGQAERLLDSAREMEDSI+V+LSSRRLEVSRVELLLQVGTFCVAIGAL+AGIFGMNLKSYLE + +AFW TT GI+VG + FF+MY YL+ RKI Sbjct: 186 LMNSMPSLLVREQAILVNLGSLRAIAMHERVLIFNYNSPGGKAFLDSLLPRLNPRNINGGPAMPFQLEVVEAALLSRIQRLERRLMRIEPRVGALLEVLPNRLTADVLEQLRLSKQALVELGSRAGDLKQMLIDLLDDPHEIRRICIMGRNCTLDKLSDNMECSVPLEKQIAEEEEEEIEMLLENYLQRCESIHGQAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAIGALIAGIFGMNLKSYLETNAWAFWATTGGIVVGAVAGFFIMYSYLKTRKIL 474
BLAST of rna-KK1_026345 vs. DB:Swiss
Match: MRS2_NEUCR (Mitochondrial inner membrane magnesium transporter mrs2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mrs2 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.145e-16 Identity = 77/272 (28.31%), Postives = 132/272 (48.53%), Query Frame = 1 Query: 4 TNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDYNRIGGK------AFLETLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLDALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRMCIMGRNCTLNKGNDD-MECSVPLEKQIAXXXXXXXXXXXXNYLQRCESCHGQAERLLDSAREMEDSIXXXXXXXXXXXXXXXXXXQVGTFCVAIGALVAGIFGMNLKSYLEEHVFAFWLTTA 798 ++++P +L+R AILLNL L+ + DCVL+FD G K AF+ L +L K ++G S+P+E +EA L+S LE + V +L L + + + L L + + + KA +R + +LLE ++ M + + L +G DD E + LE +Y + C+ +A L+ S R E+ I L + R + ++L VGT +A+G +A +GMNL++++EE + F + T+ Sbjct: 219 SSNLPHILIRPSAILLNLLHLKVLIKHDCVLLFDV--YGSKSSYPQSAFMYDLQGKLQQKQSSGANSLPYEFRALEAVLMSVTSELEADFEAVRDPVIRILSELEDDIDREKLRVLLVLSKRVSTFEQKAKLVRDAIEELLEADDDLASMYLTEKTHDLYRGEDDHTEIELLLE----------------SYNKICDEVVEEASNLVSSIRNTEEIIRAILDANRNSLMLLDLKFSVGTLGLAMGTFLASWYGMNLENFIEETNWGFAMVTS 472
BLAST of rna-KK1_026345 vs. DB:Swiss
Match: LPE10_YARLI (Mitochondrial inner membrane magnesium transporter LPE10 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=LPE10 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.431e-14 Identity = 66/262 (25.19%), Postives = 122/262 (46.56%), Query Frame = 1 Query: 13 MPALLVREYAILLNLGSLRAIAMQDCVLIFD-YNRIGGKA---FLETLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLDALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRMCIMGRNCTLNKGNDDM-ECSVPLEKQIAXXXXXXXXXXXXNYLQRCESCHGQAERLLDSAREMEDSIXXXXXXXXXXXXXXXXXXQVGTFCVAIGALVAGIFGMNLKSYLEEHVFAF 783 +P +LVR+ +IL+NL +RA+ D VL+FD + K F+ L +L N G S+P+E+ +EA +S I L+ + + +L L + + L L I + L KA +R ++ +LL+ ++ + + + + DD E + LE Y + C+ L+ + R E+ +++ L + R + ++L Q+G +A G +A ++GMNLK+++EE + F Sbjct: 153 VPTILVRDNSILINLLHIRALIKADKVLLFDVFGSTDSKTQSLFMYDLGHKLKKSNKTMG-SLPYEMRALEAIFISVIAALDAEMKVHTTVINGILSELEQDIDREKLRHLLIQSKKLSAFLQKATLIRDVIDELLDTDEDLAGLYLTEKKAGHPRAIDDHSEVEMLLE----------------TYYKHCDEIVQTVGNLVSNIRNTEEIVNIILDANRNALMHLDLKFQIGALGLAGGTFIASLYGMNLKNFIEESYWGF 397
BLAST of rna-KK1_026345 vs. DB:Swiss
Match: MRS2_SCHPO (Mitochondrial inner membrane magnesium transporter mrs2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrs2 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.984e-14 Identity = 77/266 (28.95%), Postives = 128/266 (48.12%), Query Frame = 1 Query: 13 MPALLVREYAILLNLGSLRAIAMQDCVLIFDY----NRIGGKAFLETLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLDALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRMCIMGRNCTLNKGNDDMECSVPLEKQIAXXXXXXXXXXXXNYLQRCESCHGQAERLLDSAREMEDSIXXXXXXXXXXXXXXXXXXQVGTFCVAIGALVAGIFGMNLKSYLEEHVFAFWLTTA 798 +P +LVRE +IL+NL +RA+ + VL+FD + F+ L RL K+++ G +P+E+ +E L+S + L+ L L V LL + + L L I + L KA +R +L +LLE ++ M + R T + D V L LLE Y ++ + Q + L+ + R E+ ++ L + R + + L L T + GA+VA ++GMNL++ LE H +AF++TT Sbjct: 125 VPVILVREGSILINLLHIRALIKANSVLLFDVYGSQHSHSQSQFIYELEGRLKQKSSDFG-WLPYEMRALETILVSVVNTLDSELHVLHNLVSDLLADFELDINQERLRTLLIFSKRLSGFLKKATLIRDVLDELLEQDQDLAGMYLTERLKTGKPRDLDKHDEVEL--------------LLETYCKQVDEIVQQTDNLVGNIRSTEEICNIMLDANRNSLMLLGLKLSAMTLGLGFGAVVASLYGMNLQNGLENHPYAFYITTG 375
BLAST of rna-KK1_026345 vs. DB:Swiss
Match: MRS2_ASPFU (Mitochondrial inner membrane magnesium transporter mrs2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=mrs2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.546e-13 Identity = 75/265 (28.30%), Postives = 122/265 (46.04%), Query Frame = 1 Query: 4 TNSMPALLVREYAILLNLGSLRAIAMQDCVLIFD-YNRIGG---KAFLETLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLDALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRMCIMGRNCTLNKGNDD-MECSVPLEKQIAXXXXXXXXXXXXNYLQRCESCHGQAERLLDSAREMEDSIXXXXXXXXXXXXXXXXXXQVGTFCVAIGALVAGIFGMNLKSYLEEHVFAF 783 ++++P +LVR AIL+NL LR + D VL+FD Y F+ L +L K G ++P+E +EA L+S LE+ + V +L AL + D L L I + L KA +R + DLLE ++ M + R + + DD E + LE +Y + C+ + L+ S R E+ + L + R + ++L +GT +A G L + ++GMNLK+++EE F Sbjct: 214 SSTLPHILVRPSAILINLLHLRVLIKHDRVLVFDAYGSTDSYMQSLFVYDLEGKLQQKQTGGFGALPYEFRALEAVLISVTTGLEEEFNGVREPVVRVLRALEEDIDRDKLRHLLIYSKKLGTFEQKARLVRDAIDDLLEADDDLAAMYLTERANGVQREEDDHQEVEMLLE----------------SYHKVCDEIVQASGNLVTSIRNTEEVVKAILDANRNSLMLLDLKFSIGTLGLATGTLFSALYGMNLKNFIEESDLGF 462
BLAST of rna-KK1_026345 vs. DB:Swiss
Match: MRS2_GIBZE (Mitochondrial inner membrane magnesium transporter MRS2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) OX=229533 GN=MRS2 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.776e-13 Identity = 75/267 (28.09%), Postives = 124/267 (46.44%), Query Frame = 1 Query: 4 TNSMPALLVREYAILLNLGSLRAIAMQDCVLIFDYNRIGGK------AFLETLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLDALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRMCIMGRNCTLNKGNDD-MECSVPLEKQIAXXXXXXXXXXXXNYLQRCESCHGQAERLLDSAREMEDSIXXXXXXXXXXXXXXXXXXQVGTFCVAIGALVAGIFGMNLKSYLEEHVFAF 783 ++++P +L+R AILLNL L+ + D VL+FD G K AF+ L +L K G S+P+E +EA L S LE + V +L L + + L L I + + KA +R + DLLE ++ M + + L +G DD E + LE +Y + + +A L+ R E+ + L + R + ++L VGT +A+G +AG++GMNL++++EE + F Sbjct: 209 SSNLPHILIRPSAILLNLLHLKVLIKHDRVLLFDI--YGSKTSYPQSAFMYDLQGKLQQKTAPGNASLPYEFRALEAVLTSVTSELEADFEAVREPVMHILSELEDDIDRHKLRMLLILSKRVSTFEQKAKLVRDAIEDLLEADDDLADMYLTEKTHDLYRGEDDHTEVEMLLE----------------SYHKLTDEIVQEAGNLVSGIRNTEEIVRAILDANRNALMLLDLKFSVGTLGLAMGTFLAGLYGMNLENFIEETNWGF 457
BLAST of rna-KK1_026345 vs. DB:Swiss
Match: MRS2_ASHGO (Mitochondrial inner membrane magnesium transporter MRS2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MRS2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.879e-13 Identity = 65/259 (25.10%), Postives = 122/259 (47.10%), Query Frame = 1 Query: 13 MPALLVREYAILLNLGSLRAIAMQDCVLIFDYNRIGGKAFLETLLPRLNPK--NNNGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLDALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRMCIMGRNCTLNKGNDDMECSVPLEKQIAXXXXXXXXXXXXNYLQRCESCHGQAERLLDSAREMEDSIXXXXXXXXXXXXXXXXXXQVGTFCVAIGALVAGIFGMNLKSYLEEHVFAF 783 +P+++V+ IL+NL ++A+ ++ V +FD A L L+ L K +++ P+ +E +E+ L++ + LE L + +L+ L +++ D L L I + L K+ +R ML +LLE ++ MC+ T+ D E + LE Y ++C+ Q+ LL + + ED +++ L + R + EL + + T + L+ GMNLK+++EE V+ F Sbjct: 88 IPSIVVKPTCILVNLLHIKAVIEKNRVYVFDTTSKEAAARLGVLMYDLESKLASHSSQPAQHYEHRALESILVNVMTCLETEFKHLSKQCGLVLNELEDQIDRDKLRDLLIHSKDLTSFYQKSLLIRDMLDELLESDEDLAAMCLSPAPGTVEA--DAAEVEMLLE----------------TYYKQCDEYVQQSGSLLQNIKSTEDVVNIILDANRNSLMLFELKVTIYTLGFTVATLLPAFCGMNLKNFIEESVWGF 328
BLAST of rna-KK1_026345 vs. DB:Swiss
Match: LPE10_YEAST (Mitochondrial inner membrane magnesium transporter MFM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MFM1 PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 1.710e-9 Identity = 68/272 (25.00%), Postives = 118/272 (43.38%), Query Frame = 1 Query: 13 MPALLVREYAILLNLGSLRAIAMQDCVLIFD-------YNRIGGKAFLETLLPRLNPKNN---NGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLDALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRMCIMGRNCTLNKGNDD-MECSVPLEKQIAXXXXXXXXXXXXNYLQRCESCHGQAERLLDSAREMEDSIXXXXXXXXXXXXXXXXXXQVGTFCVAIGALVAGIFGMNLKSYLEEHVFAFWLTT 795 +P+LLVRE +IL++L +++A+ D V+IFD N K F+ + RL + N P +P+E +E +S + L + L + +L L +T D L L + L KA ++ ML DLLE + M + + + DD E + LE Y + ++E + + E+ I++ L S R E+ + + +G + + I+GMNL+S++EE +A+ T Sbjct: 118 VPSLLVRENSILISLLTVKALIKPDMVIIFDSAGSGITLNSEAHKDFINDMKLRLKNQETSELNSDP-LPYEFRALETIFISALSNLTSEMKVLLTICKGVLQDLEFSITRDKLRFLLGQNKKLSSFNKKAVLVKDMLDDLLEQDDMLCDMYLTDKKAGKIRVQDDHTEIEMLLE----------------TYHNYVDEIVQKSESAISDVKTTEEIINIILDSNRNELMLLGIRYAIGMLSLGGALFLGSIYGMNLESFIEESNYAYLTVT 372 The following BLAST results are available for this feature:
BLAST of rna-KK1_026345 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: C. cajan Asha genome v1.0 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: Cajanus cajan Asha genome v1.0
Date Performed: 2019-09-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >rna-KK1_026345_Cc_Asha_v1.0 ID=rna-KK1_026345_Cc_Asha_v1.0; Name=rna-KK1_026345; organism=Cajanus cajan; type=mRNA; length=870bpback to top protein sequence of rna-KK1_026345_Cc_Asha_v1.0 >rna-KK1_026345_Cc_Asha_v1.0 ID=rna-KK1_026345_Cc_Asha_v1.0; Name=rna-KK1_026345_Cc_Asha_v1.0; organism=Cajanus cajan; type=polypeptide; length=289bpback to top mRNA from alignment at Scaffold126026-KQ483432.1:583710..588466- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>rna-KK1_026345_Cc_Asha_v1.0 ID=rna-KK1_026345_Cc_Asha_v1.0; Name=rna-KK1_026345; organism=Cajanus cajan; type=mRNA; length=4757bp; location=Sequence derived from: Scaffold126026-KQ483432.1:583710..588466- (Cajanus cajanback to top Coding sequence (CDS) from alignment at Scaffold126026-KQ483432.1:583710..588466- >rna-KK1_026345_Cc_Asha_v1.0 ID=rna-KK1_026345_Cc_Asha_v1.0; Name=rna-KK1_026345; organism=Cajanus cajan; type=CDS; length=1740bp; location=Sequence derived from: Scaffold126026-KQ483432.1:583710..588466- (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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