Vigun01g030900.2
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun01g030900.2 vs. DB:Swiss
Match: BECN1_ARATH (Beclin-1-like protein OS=Arabidopsis thaliana OX=3702 GN=ATG6 PE=1 SV=2) HSP 1 Score: 724.546 bits (1869), Expect = 0.000e+0 Identity = 367/490 (74.90%), Postives = 417/490 (85.10%), Query Frame = 1 Query: 1 MKKGDNKGRTRPFPVDPNVPRWVCQNCRNPLCIVGVDSYADKFFNDPSRSGMQGLSVHGASSVLSATKMDNSYVVLPKQRP-QALGNAHRPRGDXXXX--XXQPGKAMEESFVVVYKSESGTDGGGAHSPGTGADSGGHLHPHNSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRILSDKLDKEVEDVNRDIESYEACLKRLEGEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXXXQNAEINAELKELELKSSRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKIIPMGSYPRITDTNNSTFELFGPVNLFWSTRYDKAMTLFLACLKDFADFAKSKDQENNIPPEKCFKLPYKIDNDKVENYSITQSFNKQENWTKSLKYTLCNLKWALYWFVGNTNFQPLSAMVS 1461 M+K + ++R P+DPN+P+WVCQNC + L IVGVDSYA KFFNDP S QG S+HGA+SVL +T+MDNS+VVLP+ +P Q+ G RPRG ++ A Q GKAMEESFVVVYKSE +D GG+H+ G LH + SGFN+TI VLTRAF+IA TQTQVEQPLCL+CMR+LSDKL+KEVEDV RD+E+YEAC++RLEGE +DVLSEADFLKEK KIEEEER+L AAIEETE+QNAE+N +LKELE K +RF ELE+RYW EFNNFQFQLI+HQEERDAILAKIEVSQAHLELL +TNVL DAFPI +DGEFGTINNFRLGRLP I VEWDEINAAWGQACLLLHTMC YFRPKFQ ++KI PMGSYPRI D+NN T+ELFGPVNLFWSTRYDKAMTL+L CLKDFADFA SKDQENNIPP+ C LPYKI+ DKV YSITQSFNKQE+WTK+LKYTLCNLKWALYWFVGNTNFQPLSA VS Sbjct: 1 MRKEEIPDKSRTIPIDPNLPKWVCQNCHHSLTIVGVDSYAGKFFNDPPPSATQGSSIHGANSVLGSTRMDNSFVVLPRHKPPQSQGIPPRPRGASSPQPDATQSGKAMEESFVVVYKSEPVSDSGGSHNLSLEVGQNGPLHSNTSGFNATINVLTRAFDIARTQTQVEQPLCLECMRVLSDKLEKEVEDVTRDVEAYEACVQRLEGETQDVLSEADFLKEKKKIEEEERKLVAAIEETEKQNAEVNHQLKELEFKGNRFNELEDRYWQEFNNFQFQLIAHQEERDAILAKIEVSQAHLELLNKTNVLIDAFPIRNDGEFGTINNFRLGRLPAIKVEWDEINAAWGQACLLLHTMCNYFRPKFQCQVKIQPMGSYPRIVDSNNETYELFGPVNLFWSTRYDKAMTLYLMCLKDFADFANSKDQENNIPPDNCLNLPYKIEKDKVLGYSITQSFNKQESWTKALKYTLCNLKWALYWFVGNTNFQPLSATVS 490
BLAST of Vigun01g030900.2 vs. DB:Swiss
Match: BECN1_PIG (Beclin-1 OS=Sus scrofa OX=9823 GN=BECN1 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 9.640e-59 Identity = 140/435 (32.18%), Postives = 219/435 (50.34%), Query Frame = 1 Query: 202 KMDNSYVVLPKQRPQAL-----GNAHRPRGDXXXXXXQPGKAMEESFVVVYKS-----------ESGTDGGGAHSPGTGADSGGHLHPHNSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRILSDKLDKEVEDVNRDIESYEACLKRLEGEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXXXQNAEINAE-LKELELKSSRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKIIPMGSYPRITDTNNSTFEL----FGPVNLFWSTRYDKAMTLFLACLKDFADFAKSKDQENNIPPEKCFKLPYKIDND--KVEN-------YSITQSFNKQENWTKSLKYTLCNLKWALYW 1416 K+D S+ +L + Q L A G+ A PG EE F+ + T+ + + A GG + + + V F+I + QT V+ PLC +C L D+LD ++ + ++Y+ CL+ LE D +++ L+ +L+ E E +N +I AE L++++ ++ R + E +Y E++ F+ Q + +E ++ ++ +Q L+ LK+TNV N F I H G+FGTINNFRLGRLP +PVEW+EINAAWGQ LLLH + KFQ R +++P G++ + + + EL G + FW ++D AM FL C++ F +E E F LPY++D + K+E+ YSI FN +E WTK+LK+ L NLKW L W Sbjct: 25 KLDTSFKILDRVTIQELTAPLLATAQVKPGETQEEEANPG---EEPFIETRQDGVSRRFIPPARMMSTESANSFTLIGEASDGGTME----NLSRRLKVTGDLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILEQMHED---DSEQLRMELRELALEEERLIQELEEVEKNRKIVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQ-RYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQF--------KEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAW 440
BLAST of Vigun01g030900.2 vs. DB:Swiss
Match: BECN1_HUMAN (Beclin-1 OS=Homo sapiens OX=9606 GN=BECN1 PE=1 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 2.539e-58 Identity = 126/356 (35.39%), Postives = 194/356 (54.49%), Query Frame = 1 Query: 391 ADSGGHLHPHNSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRILSDKLDKEVEDVNRDIESYEACLKRLEGEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXXXQNAEINAE-LKELELKSSRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKIIPMGSYPRITDTNNSTFEL----FGPVNLFWSTRYDKAMTLFLACLKDFADFAKSKDQENNIPPEKCFKLPYKIDND--KVEN-------YSITQSFNKQENWTKSLKYTLCNLKWALYW 1416 A GG + + + V F+I + QT V+ PLC +C L D+LD ++ + ++Y+ CL+ LE D +++ L+ +LK E E +N +I AE L++++ ++ R + E +Y E++ F+ Q + +E ++ ++ +Q L+ LK+TNV N F I H G+FGTINNFRLGRLP +PVEW+EINAAWGQ LLLH + KFQ R +++P G++ + + + EL G + FW ++D AM FL C++ F +E E F LPY++D + K+E+ YSI FN +E WTK+LK+ L NLKW L W Sbjct: 103 ASDGGTME----NLSRRLKVTGDLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILEQMNED---DSEQLQMELKELALEEERLIQELEDVEKNRKIVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQ-RYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQF--------KEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAW 442
BLAST of Vigun01g030900.2 vs. DB:Swiss
Match: BECN1_PONAB (Beclin-1 OS=Pongo abelii OX=9601 GN=BECN1 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.097e-58 Identity = 126/356 (35.39%), Postives = 194/356 (54.49%), Query Frame = 1 Query: 391 ADSGGHLHPHNSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRILSDKLDKEVEDVNRDIESYEACLKRLEGEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXXXQNAEINAE-LKELELKSSRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKIIPMGSYPRITDTNNSTFEL----FGPVNLFWSTRYDKAMTLFLACLKDFADFAKSKDQENNIPPEKCFKLPYKIDND--KVEN-------YSITQSFNKQENWTKSLKYTLCNLKWALYW 1416 A GG + + + V F+I + QT V+ PLC +C L D+LD ++ + ++Y+ CL+ LE D +++ L+ +LK E E +N +I AE L++++ ++ R + E +Y E++ F+ Q + +E ++ ++ +Q L+ LK+TNV N F I H G+FGTINNFRLGRLP +PVEW+EINAAWGQ LLLH + KFQ R +++P G++ + + + EL G + FW ++D AM FL C++ F +E E F LPY++D + K+E+ YSI FN +E WTK+LK+ L NLKW L W Sbjct: 103 ASDGGTME----NLSRRLKVTGDLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILEQMNED---DSEQLQMELKELALEEERLIQELEDVEKNRKIVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQ-RYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQF--------KEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAW 442
BLAST of Vigun01g030900.2 vs. DB:Swiss
Match: BECN1_BOVIN (Beclin-1 OS=Bos taurus OX=9913 GN=BECN1 PE=1 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 3.114e-58 Identity = 126/356 (35.39%), Postives = 193/356 (54.21%), Query Frame = 1 Query: 391 ADSGGHLHPHNSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRILSDKLDKEVEDVNRDIESYEACLKRLEGEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXXXQNAEINAE-LKELELKSSRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKIIPMGSYPRITDTNNSTFEL----FGPVNLFWSTRYDKAMTLFLACLKDFADFAKSKDQENNIPPEKCFKLPYKIDND--KVEN-------YSITQSFNKQENWTKSLKYTLCNLKWALYW 1416 A GG + + + V F+I + QT V+ PLC +C L D+LD ++ + ++Y+ CL+ LE D +++ L +LK E E +N +I AE L++++ ++ R + E +Y E++ F+ Q + +E ++ ++ +Q L+ LK+TNV N F I H G+FGTINNFRLGRLP +PVEW+EINAAWGQ LLLH + KFQ R +++P G++ + + + EL G + FW ++D AM FL C++ F +E E F LPY++D + K+E+ YSI FN +E WTK+LK+ L NLKW L W Sbjct: 101 ASDGGTME----NLSRRLKVTGDLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILEQMNED---DSEQLGLELKELALEEERLIQELEDVEKNRKIVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQ-RYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQF--------KEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAW 440
BLAST of Vigun01g030900.2 vs. DB:Swiss
Match: BECN1_MOUSE (Beclin-1 OS=Mus musculus OX=10090 GN=Becn1 PE=1 SV=3) HSP 1 Score: 202.216 bits (513), Expect = 3.920e-58 Identity = 125/356 (35.11%), Postives = 194/356 (54.49%), Query Frame = 1 Query: 391 ADSGGHLHPHNSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRILSDKLDKEVEDVNRDIESYEACLKRLEGEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXXXQNAEINAE-LKELELKSSRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKIIPMGSYPRITDTNNSTFEL----FGPVNLFWSTRYDKAMTLFLACLKDFADFAKSKDQENNIPPEKCFKLPYKIDND--KVEN-------YSITQSFNKQENWTKSLKYTLCNLKWALYW 1416 A GG + + + V F+I + QT V+ PLC +C L D+LD ++ + ++Y+ CL+ LE D +++ L+ +LK E E +N ++ AE L++++ ++ R + E +Y E++ F+ Q + +E ++ ++ +Q L+ LK+TNV N F I H G+FGTINNFRLGRLP +PVEW+EINAAWGQ LLLH + KFQ R +++P G++ + + + EL G + FW ++D AM FL C++ F +E E F LPY++D + K+E+ YSI FN +E WTK+LK+ L NLKW L W Sbjct: 101 ASDGGTME----NLSRRLKVTGDLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILEQMNED---DSEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQVRYAQIQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQ-RYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQF--------KEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAW 440
BLAST of Vigun01g030900.2 vs. DB:Swiss
Match: BECNB_DICDI (Beclin-1-like protein B OS=Dictyostelium discoideum OX=44689 GN=atg6B PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 1.733e-57 Identity = 128/331 (38.67%), Postives = 185/331 (55.89%), Query Frame = 1 Query: 463 FEIATTQTQVEQPLCLDCMRILSDKLDKEVEDVNRDIESYEACLKRLE-GEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXXXQNAEINAELKELELKSSRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKIIPMGSYPRITDTNNS---TFELFGPVN-----LFWSTRYDKAMTLFLACLKDFADFAKSKDQENNIPPEKCFKLPYKIDNDKVENYSITQSFNKQENWTKSLKYTLCNLKWALYWFVGN 1428 F+IAT + PLCL+C ++ +L+ E ++ ++ Y A LK+LE G+ + L E KE + EEE +L IE T ++ E+ +L+ + + K LE+ YW F+ F ++ +++ERD +I+ HLE LK+TN+LNDAF + HDG FGTIN+ RLG+LP PVEW+EINAAWG A LL M + + KFQ + ++P GS R+ + +EL+G + LFW R+D M FL C+K+ + KD E F +PYKID + + I F + WTKSLK+ L NLKW L W V N Sbjct: 491 FKIATDLINYDLPLCLECTKLTIGELEDEGSILDGEVSIYSAYLKQLEKGKTEEDLEE--LGKEMTLLCEEEEQLRLMIENTHQERKEVEQLTLQLQDRIATLKSLEDSYWSCFSEFHYETFRNKDERDQTTVQIQWVNDHLESLKQTNILNDAFHLWHDGHFGTINSLRLGKLPSQPVEWNEINAAWGLAVSLLDAMAKKLKFKFQ-QFTLVPNGSCSRVDKRDVDPPLAYELYGTNDISLGRLFWYRRFDNGMIAFLQCIKELCEHITEKDPE--------FSVPYKIDKEYIGGMCIKLQFTNDDTWTKSLKFMLTNLKWILIWIVKN 810
BLAST of Vigun01g030900.2 vs. DB:Swiss
Match: BECN1_RAT (Beclin-1 OS=Rattus norvegicus OX=10116 GN=Becn1 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 3.954e-57 Identity = 126/358 (35.20%), Postives = 197/358 (55.03%), Query Frame = 1 Query: 391 ADSGGHLHPHNSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRILSDKLDKEVEDVNRDIESYEACLKRLEGEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXX--XQNAEINAE-LKELELKSSRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKIIPMGSYPRITDTNNSTFEL----FGPVNLFWSTRYDKAMTLFLACLKDFADFAKSKDQENNIPPEKCFKLPYKIDND--KVEN-------YSITQSFNKQENWTKSLKYTLCNLKWALYW 1416 A GG + + + V F+I + QT V+ PLC +C L D+LD ++ + ++Y+ CL+ LE ++E D + + +++E E I+E E +N ++ AE L++++ ++ R + E +Y E++ F+ Q + +E ++ ++ +Q L+ LK+TNV N F I H G+FGTINNFRLGRLP PVEW+EINAAWGQ LLLH + KFQ R +++P G++ + + + EL G + FW ++D AM FL C++ F +E E F LPY++D + K+E+ YSI FN +E WTK+LK+ L NLKW L W Sbjct: 101 ASDGGTME----NLSRRLKVTGDLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEMLEQ-----MNEGDSEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSAPVEWNEINAAWGQTVLLLHALANKMGLKFQ-RYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQF--------KEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAW 440
BLAST of Vigun01g030900.2 vs. DB:Swiss
Match: BECN1_CHICK (Beclin-1 OS=Gallus gallus OX=9031 GN=BECN1 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 1.703e-56 Identity = 125/356 (35.11%), Postives = 190/356 (53.37%), Query Frame = 1 Query: 391 ADSGGHLHPHNSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRILSDKLDKEVEDVNRDIESYEACLKRLEGEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXXXQNAEINAE-LKELELKSSRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKIIPMGSYPRITDTNNSTFEL----FGPVNLFWSTRYDKAMTLFLACLKDFADFAKSKDQENNIPPEKCFKLPYKIDND--KVEN-------YSITQSFNKQENWTKSLKYTLCNLKWALYW 1416 A GG + + + V F+I + QT V+ PLC +C L D+LD ++ + ++Y+ CL+ LE D + + L+ +LK E E +N +I AE + + ++ R ++ E +Y E+ F+ Q + +E ++ ++ +Q L+ LK+TNV N F I H G+FGTINNFRLGRLP +PVEW+EINAAWGQ LLLH + KFQ R +++P G++ + + + EL G + FW ++D AM FL C++ F +E E F LPY++D + K+E+ YSI FN +E WTK+LK+ L NLKW L W Sbjct: 100 ASDGGTME----NLSRRLKVTGDLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNITENECQNYKRCLEILEKMNED---DKEKLQTELKELALEEEQLIQELEDVEKNRKIVAEDFERVRAEAERLEQEEAQYQKEYCEFKRQQLELDDELKSVENQMRYAQMQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQ-RYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQF--------KEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAW 439
BLAST of Vigun01g030900.2 vs. DB:Swiss
Match: BECN1_DANRE (Beclin-1 OS=Danio rerio OX=7955 GN=becn1 PE=2 SV=3) HSP 1 Score: 196.823 bits (499), Expect = 4.179e-56 Identity = 145/476 (30.46%), Postives = 223/476 (46.85%), Query Frame = 1 Query: 28 TRPFPVDPNVPRWVCQNCRNPLCIVGVDSYADKFFNDPSRSGMQGLSVHGASSVLSATKMDNSYVVLPKQRPQALGNAHRPRGDXXXXXXQPGKAMEESFVVVYKSESGTDGGGAHSPGTGADSGGHLHPHNSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRILSDKLDKEVEDVNRDIESYEACLKRLEGEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXXXQNAEINAELKELELKSSRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKIIPMGSYPRITDTNNSTFEL----FGPVNLFWSTRYDKAMTLFLACLKDFADFAKSKDQENNIPPEKCFKLPYKIDND--KVEN-------YSITQSFNKQENWTKSLKYTLCNLKWALYW 1416 T F + +VCQ C PL + D FN R +++H ++ L V++ + Q G + + Q G A F+ + S G +D G + + V + F+I + QT ++ PLC +C L D LD ++ + ++Y++CL+ L + EA L ++++EE L +E E + + EL E S E RY E+ F+ Q + ++ ++ ++ Q L+ LK+TNV N F I H G+FGTINNFRLGRLP +PVEW+EINAAWGQ LLLH + FQ R +++P G++ + ++ + EL G + FW ++D AM FL C++ F + + D F LPY++D D K+E+ YSI FN +E WTK+LK+ L NLKW L W Sbjct: 3 TLRFSSNTMQVSFVCQRCNQPLKL-------DTSFNVLDR-----MTIHELTAPL---------VMVTANKQQDSGESSSFPEETFLENKQDGVA--RKFIPPARMMSAESTNSFTLIGEASDGGTM-----ENLSRRLKVTSNLFDIMSGQTDIDHPLCEECTDTLLDHLDTQLNITENECQNYKSCLELLSQLPEE--EEASLLNALQQLKQEEESLIQELESIETKREAVAKELDEGRNHSQLMDTEELRYQKEYCEFKRQQLELDDDLKSVDNQMRYCQIQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALASKMGLCFQ-RYQLVPYGNHSYLESLSDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKDD--------TGFCLPYRMDVDKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAW 439 The following BLAST results are available for this feature:
BLAST of Vigun01g030900.2 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun01g030900.2_Vu_IT97K-499-35_v1.1 ID=Vigun01g030900.2_Vu_IT97K-499-35_v1.1; Name=Vigun01g030900.2; organism=Vigna unguiculata; type=mRNA; length=2015bpback to top protein sequence of Vigun01g030900.2_Vu_IT97K-499-35_v1.1 >Vigun01g030900.2_Vu_IT97K-499-35_v1.1 ID=Vigun01g030900.2_Vu_IT97K-499-35_v1.1; Name=Vigun01g030900.2_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=492bpback to top mRNA from alignment at Vu01:3887005..3893764+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun01g030900.2_Vu_IT97K-499-35_v1.1 ID=Vigun01g030900.2_Vu_IT97K-499-35_v1.1; Name=Vigun01g030900.2; organism=Vigna unguiculata; type=mRNA; length=6760bp; location=Sequence derived from: Vu01:3887005..3893764+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu01:3887005..3893764+ >Vigun01g030900.2_Vu_IT97K-499-35_v1.1 ID=Vigun01g030900.2_Vu_IT97K-499-35_v1.1; Name=Vigun01g030900.2; organism=Vigna unguiculata; type=CDS; length=1476bp; location=Sequence derived from: Vu01:3887005..3893764+ (Vigna unguiculataback to top |