Vigun01g032200.1

Transcript Overview
NameVigun01g032200.1
Unique NameVigun01g032200.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1337
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:4066590..4071526 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
psvuL388Pisum sativum Cameor genome v1aPisum sativum
pvvuL468Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL359Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0346Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0593Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL572Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR040Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL219Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL193Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL322Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL617Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR001Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL145Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL328Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL497Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL340Cicer arietinum
ccavuL074Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR053Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR016Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR018Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL490Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL501Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL399Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Psat05G0604700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_20814Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
PvulFLAVERTChr05.1000194Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigst.07G141400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
jg20989.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vum_07G01833.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_004499763.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cc_v2.0_24879.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Tiffany.R1.2g011080.1Vicia faba cv. Tiffany genome v1.0Vicia faba
evm.model.Chr01.273Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigan.07G238900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_014644507.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_015218Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.2g014600.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Va05G001250.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
XM_058865790.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
XM_058865828.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
LR48_mrnaVigan05g015600Vigna angularis Jingnong 6 genome v1.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun01g032200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g032200Vigun01g032200_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g032200.1Vigun01g032200.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g032200.1_Vu_IT97K-499-35_v1.1Vigun01g032200.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g032200.1.v1.1.five_prime_UTR.1Vigun01g032200.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g032200.1.v1.1.CDS.1Vigun01g032200.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g032200.1.v1.1.CDS.2Vigun01g032200.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g032200.1.v1.1.CDS.3Vigun01g032200.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g032200.1.v1.1.CDS.4Vigun01g032200.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g032200.1.v1.1.CDS.5Vigun01g032200.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g032200.1.v1.1.CDS.6Vigun01g032200.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g032200.1.v1.1.CDS.7Vigun01g032200.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g032200.1.v1.1.CDS.8Vigun01g032200.1.v1.1.CDS.8_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g032200.1.v1.1.CDS.9Vigun01g032200.1.v1.1.CDS.9_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g032200.1.v1.1.three_prime_UTR.1Vigun01g032200.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
BLAST of Vigun01g032200.1 vs. DB:Swiss
Match: IMP4_RAT (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Rattus norvegicus OX=10116 GN=Imp4 PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 1.042e-110
Identity = 155/282 (54.96%), Postives = 209/282 (74.11%), Query Frame = 1
Query:   34 YLYRKSLEGKERLLYEKKRKIGEALQEGKPIPTELRNEEAALRRQIDLEDENTAVPRTHIDDEYAYAAEKDPKILLTTSRDPSAPLQQFVKELSIVFPNAQRMNRGGQVISEIIESCRAHDYTDVILVHEHRGVPDGLIVCHLPFGPTAYFGLHNVVTRHEIKDRKAIGTMPEAYPHLILDNFSTKLGERSANILKHLFPVPKPDTKRIVTFSNQSDYISFRHHIYEKHGGPKSVELKEIGPRFELRLYQIKLGTVDQ-AEAQIEWVIRPYMNTTKKRKFLS 876
            YLYRK+ E  +R + EKK ++  AL+E + IPTELR E  AL+  ++ +D       +H+DDEY +A  +DPK+++TTSRDPS+ L+ F KEL +VFP AQRMNRG   +  ++ +C+A+  TD+++VHEHRG P GLIV HLPFGPTAYF L NVV RH+I D   +GTM EA PHLI   FS++LG+R ++IL++LFPVPK D+ R++TF+NQ DYISFRHH+Y+K    ++VEL E+GPRFEL+LY I+LGT++Q A A +EW   PY NT +KR FLS
Sbjct:   12 YLYRKAREEAQRSVQEKKERVKRALEENQLIPTELRREALALQGSLEFDDAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LGTMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKK-TDHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFLS 289          
BLAST of Vigun01g032200.1 vs. DB:Swiss
Match: IMP4_MOUSE (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Mus musculus OX=10090 GN=Imp4 PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 1.042e-110
Identity = 155/282 (54.96%), Postives = 209/282 (74.11%), Query Frame = 1
Query:   34 YLYRKSLEGKERLLYEKKRKIGEALQEGKPIPTELRNEEAALRRQIDLEDENTAVPRTHIDDEYAYAAEKDPKILLTTSRDPSAPLQQFVKELSIVFPNAQRMNRGGQVISEIIESCRAHDYTDVILVHEHRGVPDGLIVCHLPFGPTAYFGLHNVVTRHEIKDRKAIGTMPEAYPHLILDNFSTKLGERSANILKHLFPVPKPDTKRIVTFSNQSDYISFRHHIYEKHGGPKSVELKEIGPRFELRLYQIKLGTVDQ-AEAQIEWVIRPYMNTTKKRKFLS 876
            YLYRK+ E  +R + EKK ++  AL+E + IPTELR E  AL+  ++ +D       +H+DDEY +A  +DPK+++TTSRDPS+ L+ F KEL +VFP AQRMNRG   +  ++ +C+A+  TD+++VHEHRG P GLIV HLPFGPTAYF L NVV RH+I D   +GTM EA PHLI   FS++LG+R ++IL++LFPVPK D+ R++TF+NQ DYISFRHH+Y+K    ++VEL E+GPRFEL+LY I+LGT++Q A A +EW   PY NT +KR FLS
Sbjct:   12 YLYRKAREEAQRSVQEKKERVKRALEENQLIPTELRREALALQGSLEFDDAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LGTMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKK-TDHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFLS 289          
BLAST of Vigun01g032200.1 vs. DB:Swiss
Match: IMP4_BOVIN (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Bos taurus OX=9913 GN=IMP4 PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 3.039e-110
Identity = 155/282 (54.96%), Postives = 207/282 (73.40%), Query Frame = 1
Query:   34 YLYRKSLEGKERLLYEKKRKIGEALQEGKPIPTELRNEEAALRRQIDLEDENTAVPRTHIDDEYAYAAEKDPKILLTTSRDPSAPLQQFVKELSIVFPNAQRMNRGGQVISEIIESCRAHDYTDVILVHEHRGVPDGLIVCHLPFGPTAYFGLHNVVTRHEIKDRKAIGTMPEAYPHLILDNFSTKLGERSANILKHLFPVPKPDTKRIVTFSNQSDYISFRHHIYEKHGGPKSVELKEIGPRFELRLYQIKLGTVDQ-AEAQIEWVIRPYMNTTKKRKFLS 876
            YLYRK+ E  ER   E+K K+  AL+E + IPTELR E  AL+  ++ +D        H+DDEY +A  +DPK+++TTSRDPS+ L+ F KEL +VFP AQRMNRG   +  ++ +C+A+  TD+++VHEHRG P GLIV HLPFGPTAYF L NVV RH+I D   +GT  EA PHLI+  FS++LG+R ++IL++LFPVPK D++R++TF+NQ DYISFRHH+Y+K    ++VEL E+GPRFEL+LY I+LGT++Q A A +EW   PY NT  KR FLS
Sbjct:   12 YLYRKAREEAERTAQERKDKVRRALEENRLIPTELRREALALQGSLEFDDAGGEGVTNHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LGTASEAKPHLIMHGFSSRLGKRVSDILRYLFPVPKDDSRRVITFANQDDYISFRHHVYKK-TNHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTAHKRVFLS 289          
BLAST of Vigun01g032200.1 vs. DB:Swiss
Match: IMP4_HUMAN (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Homo sapiens OX=9606 GN=IMP4 PE=1 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 8.669e-110
Identity = 154/283 (54.42%), Postives = 208/283 (73.50%), Query Frame = 1
Query:   34 YLYRKSLEGKERLLYEKKRKIGEALQEGKPIPTELRNEEAALRRQIDLEDENTAVPRTHIDDEYAYAAEKDPKILLTTSRDPSAPLQQFVKELSIVFPNAQRMNRGGQVISEIIESCRAHDYTDVILVHEHRGVPDGLIVCHLPFGPTAYFGLHNVVTRHEIKDRKAIGTMPEAYPHLILDNFSTKLGERSANILKHLFPVPKPDTKRIVTFSNQSDYISFRHHIYEKHGGPKSVELKEIGPRFELRLYQIKLGTVDQ-AEAQIEWVIRPYMNTTKKRKFLSN 879
            YLYRK+ E  +R   E+K ++  AL+E + IPTELR E  AL+  ++ +D       +H+DDEY +A  +DPK+++TTSRDPS+ L+ F KEL +VFP AQRMNRG   +  ++ +C+A+  TD+++VHEHRG P GLIV HLPFGPTAYF L NVV RH+I D   +GTM EA PHLI   FS++LG+R ++IL++LFPVPK D+ R++TF+NQ DYISFRHH+Y+K    ++VEL E+GPRFEL+LY I+LGT++Q A A +EW   PY NT +KR FLS 
Sbjct:   12 YLYRKAREEAQRSAQERKERLRRALEENRLIPTELRREALALQGSLEFDDAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LGTMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKK-TDHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFLST 290          
BLAST of Vigun01g032200.1 vs. DB:Swiss
Match: IMP4_PONAB (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Pongo abelii OX=9601 GN=IMP4 PE=2 SV=2)

HSP 1 Score: 322.783 bits (826), Expect = 9.461e-110
Identity = 154/282 (54.61%), Postives = 208/282 (73.76%), Query Frame = 1
Query:   34 YLYRKSLEGKERLLYEKKRKIGEALQEGKPIPTELRNEEAALRRQIDLEDENTAVPRTHIDDEYAYAAEKDPKILLTTSRDPSAPLQQFVKELSIVFPNAQRMNRGGQVISEIIESCRAHDYTDVILVHEHRGVPDGLIVCHLPFGPTAYFGLHNVVTRHEIKDRKAIGTMPEAYPHLILDNFSTKLGERSANILKHLFPVPKPDTKRIVTFSNQSDYISFRHHIYEKHGGPKSVELKEIGPRFELRLYQIKLGTVDQ-AEAQIEWVIRPYMNTTKKRKFLS 876
            YLYRK+ E  +R   E+K ++  AL+E + IPTELR E  AL+  ++ +D       +H+DDEY +A  +DPK+++TTSRDPS+ L+ F KEL +VFP AQRMNRG   +  ++ +C+A+  TD+++VHEHRG P GLIV HLPFGPTAYF L NVV RH+I D   +GTM EA PHLI   FS++LG+R ++IL++LFPVPK D+ R++TF+NQ DYISFRHH+Y+K    ++VEL E+GPRFEL+LY I+LGT++Q A A +EW   PY NT +KR FLS
Sbjct:   12 YLYRKAREEAQRSAQERKERLRRALEENRLIPTELRREALALQGSLEFDDAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHEVGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LGTMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKK-TDHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFLS 289          
BLAST of Vigun01g032200.1 vs. DB:Swiss
Match: YHPK_CAEEL (Brix domain-containing protein ZK795.3 OS=Caenorhabditis elegans OX=6239 GN=ZK795.3 PE=4 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 4.772e-108
Identity = 157/293 (53.58%), Postives = 205/293 (69.97%), Query Frame = 1
Query:    1 MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIGEALQEGKPIPTELRNEEAALRRQIDLEDENTAVPRTHIDDEYAYAAEKDPKILLTTSRDPSAPLQQFVKELSIVFPNAQRMNRGGQVISEIIESCRAHDYTDVILVHEHRGVPDGLIVCHLPFGPTAYFGLHNVVTRHEIKDRKAIGTMPEAYPHLILDNFSTKLGERSANILKHLFPVPKPDTKRIVTFSNQSDYISFRHHIYEKHGGPKSVELKEIGPRFELRLYQIKLGTVDQ-AEAQIEWVIRPYMNTTKKRKFLS 876
            M+RR  RLRRE+++RKSLE K++ L EK+ KI  AL+    I   LR +   L +  D   +     +   D EY +A  +DPKI++TTSRDPS+ L+ F KE+ ++FPNAQR+NRG   + +++++ +A D TD+I+  E RG PDG++VCHLPFGPTA+F + NVV RH+I +    GTM E YPHLI DN ++KLG R   ILKHLFPVPKPD+KRI+TFSN  DYISFRHH+Y K      VEL E GPRFEL+ YQIKLGT++  A A+ EWV+R Y NT +KR FLS
Sbjct:    1 MIRRENRLRREFIFRKSLEEKQKSLEEKREKIRNALENNTKIDYNLRKDAIELAKGSDWGGQ-----QYETDSEYRWAGAQDPKIVITTSRDPSSRLKMFAKEMKLIFPNAQRINRGHYDVKQVVQASKAQDSTDLIIFTETRGNPDGMLVCHLPFGPTAFFSMANVVMRHDIPN---CGTMSEQYPHLIFDNLNSKLGHRFTTILKHLFPVPKPDSKRIITFSNSEDYISFRHHVY-KTENDGEVELTEAGPRFELKPYQIKLGTLETLAAAEDEWVLRSYTNTARKRTFLS 284          
BLAST of Vigun01g032200.1 vs. DB:Swiss
Match: IMP4_SCHPO (U3 small nucleolar ribonucleoprotein protein imp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=imp4 PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.604e-95
Identity = 140/285 (49.12%), Postives = 203/285 (71.23%), Query Frame = 1
Query:    1 MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIGEALQEGKPIPTELRNEEAALRRQIDLEDENTAV---PRTHIDDEYAYAAEKDPKILLTTSRDPSAPLQQFVKELSIVFPNAQRMNRGGQVISEIIESCRAHDYTDVILVHEHRGVPDGLIVCHLPFGPTAYFGLHNVVTRHEIKDRKAIGTMPEAYPHLILDNFSTKLGERSANILKHLFPV-PKPDTKRIVTFSNQSDYISFRHHIYEKHGGPKSVELKEIGPRFELRLYQIKLGTVDQAEAQIEWVIRPY 843
            MLRR +R RR+++Y+++ E +E  L EK+R + +AL+  K +  +L+ E++ L++     DE+ A      T++DDEY    E++PK+L+TTSR+PS+ L QF KE+ ++ PN+ R+NRG  V+  ++E+ RA+D TD++++HEHRG+PDGL++ HLP+GPT  F LHNVV RH+I +    GTM EAYPHLI +N ++KLG+R    L  LFP  PK  T R+VTF+N  DYISFRHHIY K  GPK + L E GPRFE++L++I LGTVD  +A +EW ++PY
Sbjct:    1 MLRRAVRERRQFIYKRNQELQEAKLNEKRRALRKALEGNKELNKDLQ-EDSQLQKDYKY-DESRATQEETETNLDDEYHRLGEREPKVLVTTSREPSSRLAQFAKEVRLLIPNSYRLNRGNIVVGSLVEAARANDITDIVILHEHRGIPDGLVISHLPYGPTLSFSLHNVVLRHDIPN---TGTMSEAYPHLIFENLTSKLGKRVKTALSALFPPDPKDTTPRVVTFANTDDYISFRHHIYAK-TGPKQIILSEAGPRFEMKLFEITLGTVDMVDADVEWKLKPY 279          
BLAST of Vigun01g032200.1 vs. DB:Swiss
Match: IMP4_YARLI (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=IMP4 PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 2.144e-94
Identity = 140/293 (47.78%), Postives = 200/293 (68.26%), Query Frame = 1
Query:    1 MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIGEALQEGKPIPTELRNEEAALRRQIDLEDENTAVPRTHIDDEY-AYAAEKDPKILLTTSRDPSAPLQQFVKELSIVFPNAQRMNRGGQVISEIIESCRAHDYTDVILVHEHRGVPDGLIVCHLPFGPTAYFGLHNVVTRHEIKDRKAIGTMPEAYPHLILDNFSTKLGERSANILKHLFPVP-KPDTKRIVTFSNQSDYISFRHHIYEKHGGPKSVELKEIGPRFELRLYQIKLGTVDQAEAQIEWVIRPYMNTTKKRKFL 873
            M+RR  R RREYLYRKSL+ +E    +K++++  AL  GKP+P ++ ++E  LR+ I   DE+    +  IDDEY A +   DPK+++TTSRDPS  L QF KE+ ++FP + R+NRGG V+  ++ +C+    +D+I++HEHRGVP  + V H P GPTAYF LHNVV RH++ D    G M E +PHLI DNF+T LG+R   ILKHLFP   K D+ R++TF+N+ D+IS R H+Y K    + VEL E+GPRFE+RLY ++LGT++  +A +EW +  +M T  K+ +L
Sbjct:    1 MIRRQARERREYLYRKSLQLQEATKIQKRQQLKAALASGKPLPKDVADDEE-LRKTIAY-DESV---QDEIDDEYSAMSGITDPKVVVTTSRDPSTRLSQFAKEVKLLFPTSIRLNRGGTVLPSLVSACKTSASSDLIVLHEHRGVPTAMTVSHFPHGPTAYFSLHNVVLRHDLPD---TGNMSEVHPHLIFDNFTTDLGKRVVQILKHLFPPGVKKDSARVITFANRGDFISVRQHVYVK--TREGVELAEVGPRFEMRLYDLRLGTLENKDADVEWRMHGFMRTANKKDYL 283          
BLAST of Vigun01g032200.1 vs. DB:Swiss
Match: IMP4_YEAST (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IMP4 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 2.474e-91
Identity = 135/296 (45.61%), Postives = 200/296 (67.57%), Query Frame = 1
Query:    1 MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIGEALQEGKPIPTELRNEEAALRRQIDLED---ENTAVPRTHIDDEYAYAAE-KDPKILLTTSRDPSAPLQQFVKELSIVFPNAQRMNRGGQVISEIIESCRAHDYTDVILVHEHRGVPDGLIVCHLPFGPTAYFGLHNVVTRHEIKDRKAIGTMPEAYPHLILDNFSTKLGERSANILKHLFPV-PKPDTKRIVTFSNQSDYISFRHHIYEKHGGPKSVELKEIGPRFELRLYQIKLGTVDQAEAQIEWVIRPYMNTTKKRKFL 873
            MLRR  R RREYLYRK+ E ++  L +K++ I +AL +GKP+P EL  +E+ L++    +    E+       +DDEYA  +   DP+I++TTSRDPS  L QF KE+ ++FPNA R+NRG  V+  ++++C+    TD++++HEHRGVP  L + H P GPTA F LHNVV RH+I +    G   E  PHLI DNF+T LG+R   ILKHLF   PK D++R++TF+N+ D+IS R H+Y +    + VE+ E+GPRFE+RL++++LGT++  +A +EW +R ++ T  K+ +L
Sbjct:    1 MLRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDES-LQKDFRYDQSLKESEEADDLQVDDEYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLNRGNYVMPNLVDACKKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRHDIIN---AGNQSEVNPHLIFDNFTTALGKRVVCILKHLFNAGPKKDSERVITFANRGDFISVRQHVYVR--TREGVEIAEVGPRFEMRLFELRLGTLENKDADVEWQLRRFIRTANKKDYL 290          
BLAST of Vigun01g032200.1 vs. DB:Swiss
Match: IMP4_CANGA (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=IMP4 PE=3 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 1.348e-89
Identity = 137/299 (45.82%), Postives = 200/299 (66.89%), Query Frame = 1
Query:    1 MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIGEALQEGKPIPTELRNEEAALR------RQIDLEDENTAVPRTHIDDEY-AYAAEKDPKILLTTSRDPSAPLQQFVKELSIVFPNAQRMNRGGQVISEIIESCRAHDYTDVILVHEHRGVPDGLIVCHLPFGPTAYFGLHNVVTRHEIKDRKAIGTMPEAYPHLILDNFSTKLGERSANILKHLF-PVPKPDTKRIVTFSNQSDYISFRHHIYEKHGGPKSVELKEIGPRFELRLYQIKLGTVDQAEAQIEWVIRPYMNTTKKRKFL 873
            MLRR  R RREYLYRK+ E +E  L +K++ I +AL +GKP+P EL  +E   +         D EDE        +DDEY A +   + ++++TTSRDPS+ L QF KE+ ++FPNA R+NRG  V+++++ +C+    TD+I++HEHRGVP  L V H P+GPTA+F LHNVV RH+I +R   G   E  PHLI DNF+T LG R   ILK+LF P PK D+ R++TF+N+ D+IS R H+Y +      VE+ E+GPRFE+RL++++LGT++  +A +EW +R ++ T  ++ +L
Sbjct:    1 MLRRQARERREYLYRKAQELQETQLQQKRQIIKQALAQGKPLPKELAEDEQLQKDFRYDQSMADNEDE------AGVDDEYSASSGIVEARVIVTTSRDPSSRLAQFAKEIKLLFPNAVRLNRGNYVMADLVSACKKSGTTDLIVLHEHRGVPTSLTVSHFPYGPTAFFSLHNVVLRHDILNR---GNQSEVNPHLIFDNFTTPLGNRVVTILKNLFPPGPKKDSSRVITFANRGDFISVRQHVYVR--TKDGVEMAEVGPRFEMRLFELRLGTLENKDADVEWQLRRFVRTANRKDYL 288          
The following BLAST results are available for this feature:
BLAST of Vigun01g032200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
IMP4_RAT1.042e-11054.96U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]
IMP4_MOUSE1.042e-11054.96U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]
IMP4_BOVIN3.039e-11054.96U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]
IMP4_HUMAN8.669e-11054.42U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]
IMP4_PONAB9.461e-11054.61U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]
YHPK_CAEEL4.772e-10853.58Brix domain-containing protein ZK795.3 OS=Caenorha... [more]
IMP4_SCHPO1.604e-9549.12U3 small nucleolar ribonucleoprotein protein imp4 ... [more]
IMP4_YARLI2.144e-9447.78U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]
IMP4_YEAST2.474e-9145.61U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]
IMP4_CANGA1.348e-8945.82U3 small nucleolar ribonucleoprotein protein IMP4 ... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007109Brix domainSMARTSM00879Brix_2coord: 86..262
e-value: 2.2E-62
score: 223.2
IPR007109Brix domainPFAMPF04427Brixcoord: 90..260
e-value: 2.3E-33
score: 115.9
IPR007109Brix domainPROSITEPS50833BRIXcoord: 83..268
score: 44.742
NoneNo IPR availableGENE3D3.40.50.10480coord: 83..223
e-value: 3.8E-25
score: 90.5
NoneNo IPR availableSUPERFAMILY52954Class II aaRS ABD-relatedcoord: 82..265

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g032200.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g032200.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g032200.1; organism=Vigna unguiculata; type=mRNA; length=1337bp
GCAGGTCGTTTTGCTCTCAGGGTATCCTTTCCTTTTCTTCACTTCCTTCT
CTCTTGTTCCCGCGCCGCTCCGCACCTCTTCTTCTTTGTTTTTCTCCATC
TCTGAACGGTGCCGTTTCGTTCTGTGAGTGCGTTGAACAGTTGAACATGC
TGCGTAGAAACATTCGATTGAGGAGAGAGTATTTGTACAGAAAGAGCTTA
GAAGGCAAAGAACGCTTGCTCTATGAAAAGAAACGCAAAATCGGAGAAGC
GCTTCAAGAGGGGAAACCCATTCCCACTGAACTCAGAAATGAGGAAGCTG
CACTTCGACGCCAAATCGACCTTGAAGATGAAAACACTGCTGTTCCAAGA
ACGCACATTGATGATGAGTATGCTTATGCTGCGGAAAAGGATCCCAAGAT
TTTGTTGACCACTTCCAGGGATCCAAGTGCTCCTCTTCAGCAGTTTGTAA
AGGAGTTGAGTATAGTTTTTCCTAATGCGCAGCGAATGAATCGTGGTGGT
CAGGTTATCTCAGAGATTATAGAATCTTGTCGTGCACATGACTATACTGA
TGTTATTTTGGTTCATGAACATCGTGGTGTACCAGATGGTTTAATTGTTT
GCCATCTACCATTTGGTCCAACTGCATATTTTGGATTACACAATGTGGTT
ACAAGGCATGAAATTAAAGACAGGAAAGCTATTGGAACTATGCCTGAGGC
ATATCCACATTTGATTCTTGATAACTTCTCAACTAAGTTAGGCGAAAGGT
CAGCGAACATTCTCAAGCATCTTTTTCCCGTGCCAAAACCAGACACAAAA
CGAATTGTCACTTTTTCCAACCAATCTGACTATATCTCGTTCAGGCATCA
TATTTATGAAAAGCACGGAGGCCCTAAATCTGTAGAACTGAAGGAAATTG
GTCCACGATTTGAGTTACGGCTTTATCAGATAAAGTTGGGAACGGTGGAT
CAAGCTGAAGCTCAGATAGAATGGGTCATTAGACCTTACATGAACACAAC
TAAAAAGCGGAAATTTCTCAGTAATTGATGCAAACATTGTTATGGATTTT
GAGCTCGCTTTTCACGGACTGTACTTCGGATGATATGTGTAGTTGATGAG
GTTGACAAACGAACTAAATTATTTTAAATGAAATTTATATCAGTTTAGTG
CAATAGCAAAAATATAAGCAAATGAAAATGGAAATATACTTGCTTACCTC
TGGATGAAAATAATTATTTTTAGAATTTAATTTCCATATGTGCATGTTGT
GTGATCTTTTATATCTTTTTGAGTTTGATGTATGTTGGTCCTTGAATTCA
TGTATCACTGATTTTGTATTAAATGAAATGTTTGTTT
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protein sequence of Vigun01g032200.1_Vu_IT97K-499-35_v1.1

>Vigun01g032200.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g032200.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g032200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=294bp
MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIGEALQEGKPIPTELRNEE
AALRRQIDLEDENTAVPRTHIDDEYAYAAEKDPKILLTTSRDPSAPLQQF
VKELSIVFPNAQRMNRGGQVISEIIESCRAHDYTDVILVHEHRGVPDGLI
VCHLPFGPTAYFGLHNVVTRHEIKDRKAIGTMPEAYPHLILDNFSTKLGE
RSANILKHLFPVPKPDTKRIVTFSNQSDYISFRHHIYEKHGGPKSVELKE
IGPRFELRLYQIKLGTVDQAEAQIEWVIRPYMNTTKKRKFLSN*
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mRNA from alignment at Vu01:4066590..4071526+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g032200.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g032200.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g032200.1; organism=Vigna unguiculata; type=mRNA; length=4937bp; location=Sequence derived from: Vu01:4066590..4071526+ (Vigna unguiculata
GCAGGTCGTTTTGCTCTCAGGGTATCCTTTCCTTTTCTTCACTTCCTTCT CTCTTGTTCCCGCGCCGCTCCGCACCTCTTCTTCTTTGTTTTTCTCCATC TCTGAACGGTGCCGTTTCGTTCTGTGAGTGCGTTGAACAGTTGAACATGC TGCGTAGAAACATTCGATTGAGGAGAGAGTATTTGTACAGAAAGAGCTTA GAAGGCAAAGAACGCTTGCTCTATGAAAAGAAACGCAAAATCGGAGAAGC GCTTCAAGGTTTCTGTTTTGTTGTTTTGTTTTTTTTGGTTTCATATTCAA CATTATGATACTAATAATAATAATGATTTTTATTATTTCTCATATAATTA TGTTTATTTATTTATTTGTTTGGTTTTTGCAGAGGGGAAACCCATTCCCA CTGAACTCAGAAATGAGGAAGCTGCACTTCGACGCCAAATCGACCTTGAA GATGAAAACACTGCTGGTAAGTGGTGCCACGCACTATGTTTCTTCATGTT TTTTTTTTCTTTTTCTTTTATGCAATAACTTTAAATGGATTTTTTTGTTT GGTTAATGCATATGAAGAGAATGTAAGAAGTAACAAAATGAAATAAAGTT GCCCACAAGCTAAAATTAGCTTGCACATGAGTTAAAAACTGTGTTTTTCC TTTCTATTTTCCTGTTATAGAAGTATTTGTAGAGACACTTAGCCAACTAA AAACTAGTTTAATTTATAGAGAAGTTTATTTTTTTTTTCTTTCTTATTTC CTTCTGTTAGAAGTGCTTGCGGAAAACTTTGTTTTAATACATCCAAGGTT ATTTTTCTTTTGTGCCATATATCCTTCTGTTGTGTGTTTCAATATGGGGT TTGATGGGATTTATAATTGAATTCAGTTCCAAGAACGCACATTGATGATG AGTATGCTTATGCTGCGGAAAAGGATCCCAAGATTTTGTTGACCACTTCC AGGGATCCAAGTGCTCCTCTTCAGCAGTTTGTAAAGGTTTGCTTGCTTTT GATGTGTGTGGTGTTTGTTTGTTTCAATTCTGTTATTTAAACCAAATTTT TTTCTACTTTTTTGTCTGTTACTTCAAGGACTCTTGTTTATTGTGATCTT CAATTCTTTTTGTGCAGGAGTTGAGTATAGTTTTTCCTAATGCGCAGCGA ATGAATCGTGGTGGTCAGGTTGGTGTCTTTAATTATTCATCATGTGTTGT CCCATACTGCATGTTTGTGACATCATGATCTGATTATTTGGTGGTTTCTT TGGTCATGTGATTTAGATAAGAAATTATGTTTTTAATTATAAATAAGAGA AGAACCAGGATAGGATAAGAAAATAGTGGTTTTTTGAGTTATTCTTGCAA AAGTGTAGAGCACATTGTCTGAACACGATACTGAAATGACACCCCTAGTG CTCAGCAACACCATGAGTTTCAAATTAATTATCTCGTAAAAGAGTAGTTG CTCAAATGCAGTGTTTTTTTTCCAAACTGGATGTTCACGTAATACATAAG TTTAAAAGTGCTATGTGAGGTCTACAAATCTGCATGTGTGCTTTACGAAT ACTGTTGCTTTCCAGACACAGAATCTTGACCTTGGAATGAGTTTTGGATT TCCAAATTCCAAATGCTCTTAAAGGAACATCTATCTATCTGGAGAATGCA TACAAAACTGAAAATATGATTTGCTAGAAGTAAATAAACCAAAAGAACCG AGTACAAATTCTCGATGGGTTAGAGAAAATATGCAAAGAATCTCAGTTAA AGAAGATCACAATGGATTTGTACTCATTACACCCCATTCATTACTTGCCT CTGTCATTCAGGCCTGTGAAGTTAATATAATTTAATTTTCAATAGTATGT ATGCGTGCGGTCTTTCAGTGGGACCACACCTTACTCCTCTTGCTTGTTAA GGAAATTAATATTCTAACGTCACAATCGAAGGCATTACATGAATAACACT CACACCACTAGGTTCTATTACTCCGTGCATCTCTGCTTCAATTTAGTTGC CTTCATTAAGCCATTTTTTTCATCTAGAATGTCTGATGGCTTTCTGTAAT TAGCTTTATTTTCAACTCTTGCTAAAACATATCAACATCTAATTCTTGAC TCCATGAGCAACTTGCCTAATGGTATATGCAATCTTCCTTTTCATTTCAG GTTATCTCAGAGATTATAGAATCTTGTCGTGCACATGACTATACTGATGT TATTTTGGTTCATGAACATCGTGGTGTACCAGATGGTTTAATTGTTTGCC ATCTACCATTTGGTCCAACTGCATATTTTGGATTACACAATGTGGCAAGT ATTAGTCTTACAGTGTTTCATATTGATTTTAGGGAACAATATACTAATAT GTTGTTTCATACAGGTTACAAGGCATGAAATTAAAGACAGGAAAGCTATT GGAACTATGCCTGAGGCATATCCACATTTGATTCTTGATAACTTCTCAAC TAAGGTATTCATAATTCAGTATGAGCTTTATTATCTAAGGAAGTACTAAG TTTCAATGACTATGATCTGTTGCTTTGTCTCTGGACTTTTTGATAATTAC AGGTCCTGCAGTATCATTGGTTCTTATCTTATTCCATAATGTAGTAGTGA TTGGAGTTCAAAACGATTTTAAAGTATTAAAAAATCTGGATGTAAATTTA ACTGGTTCAGGCTTTAGTTGACATAATATTATTGACTAATACATATTTAC ACTGTGCTGGATGGATATTAAATTCCAATGTTGACATGCAATTGTCATTA TGTTTAAACATCAAGTGATATTAAACTTTCACTGAAGCCAGAATAATATG TGAACATGTTTAAGCATTGTAGTGTGTTGCTATCATGGCATGTCAAGTGT TGAACTGTGCAATCTGGTTCTGGTTGAGTACATGTACTTTAGGCTGTGGA TTTAGCATTTGACAGGTTAGTTAGATATAAAATTCTTATCTAAGTGTAGA CAATAGCATAGATTAAGTGTTACGAGAATGGGAATGTTTTGATGCATGAG TAGGCATATAAGAATAGATATGATGTGGAGTCAATATATTGAGAGAGAAT ACTAGTGGCTTCTACTGAAAAAAGAATTGCAAAACCATAGCCAAAAAGCC ATGTTACTATAATGCCCAAAATTTTGTGACCAGTAGCTAATGAATCTGAG TTGATAGGGTGTGCTGTCATTTGTTTGAGCACTGATTCATGTAAAAGTTA TATAGCTCGATTTTTCAATTACATCTCTTGTACTTATGTGCCTTTGAAAT AAGAAATTGTACTACTGAGATTCAAACTCCAGTTCATTTTTGAAAAAGAA AGATGCTCAATCACTATTTCATTACTGGTTTTTTGGTGAACGAAGTTATT TCTTATAATATATTTTTGTATCCTTTTTATATGAAAAATGTTCGAGAGTC TGCCAAGATATCATTTATGATTGACTTATAGGGTTGTTTACCAGGACCTT TCCCTTGTCTTTTTCTCGTCTCTTGAATATCTTTTTACAAAATTATGCTC TGGCCATCTCAATCTAAACAAAATTAATTACTGTTGACTACATTATACTA CTGAGTGCTGACTGCTCATCTTGTTTGGAATTCTTTTGGACGTTAAACAG TTAGGCGAAAGGTCAGCGAACATTCTCAAGCATCTTTTTCCCGTGCCAAA ACCAGACACAAAACGAATTGTCACTTTTTCCAACCAATCTGACTATATCT CGTTCAGGTTAGGTCCATGTTTCCAATTTTGTGGATTCAGCTTCATTATT TGTTCAAGTTCTAACGATTATTAACCTTCTGGTTAATTTGTTTCTTTAAA TTGTTTCTGTTATGTACAGGCATCATATTTATGAAAAGCACGGAGGCCCT AAATCTGTAGAACTGAAGGAAATTGGTCCACGATTTGAGTTACGGCTTTA TCAGGTTTGCATCACAATTAAGTCCGCCATGGGTTGAACACATTATTGCT ACTAGGATTTAAGGTTTTCGTTTGCTTAAAGCTGTATAGTGCAGTGATTG TTTTGCATGGGCTATATGATATCTTATCACTATGTTTTCATCATCATTAA TACTTCTCATGAGCTTAACTGTGCTTTGATTTCGTTATGATTTATTTTTT TTATTTAAATACCATAGTTTTGTAACATATCAGTTTTTCTAGACAATGAA TACGTCTACATGACAGGACCTAGCCCAATTCAATAAGCAGTATCACTTTC AATTGTGATTAAGCATTGTTTTCTAATTTTTGGAACCTATGGATGAAAAC TGGCTATTTAAGTCTTCTGGTATCGTAGCTGCTTAAAGTGGATACTTCTT TCCCCAACCTGTGGATTAAATTGGACCATAGTAGTTCATGCGTCAGTTTA TTGTTTTTTGTTTTGCTTTCATTATAGTCACACTTCAGTTTTTTGTTTGG GTTTCATTGGTTATCTCAAACGTCAGTTTCCGAAGTAAATTGTCATTGAA ACTGGCCTATTATTACTCATACAACATATCTGTTGAACAAGTACTTTCAG TTCCTGATGTTTTCAAAAACTGTTTTCAGATAAAGTTGGGAACGGTGGAT CAAGCTGAAGCTCAGATAGAATGGGTCATTAGACCTTACATGAACACAAC TAAAAAGCGGAAATTTCTCAGTAATTGATGCAAACATTGTTATGGATTTT GAGCTCGCTTTTCACGGACTGTACTTCGGATGATATGTGTAGTTGATGAG GTTGACAAACGAACTAAATTATTTTAAATGAAATTTATATCAGTTTAGTG CAATAGCAAAAATATAAGCAAATGAAAATGGAAATATACTTGCTTACCTC TGGATGAAAATAATTATTTTTAGAATTTAATTTCCATATGTGCATGTTGT GTGATCTTTTATATCTTTTTGAGTTTGATGTATGTTGGTCCTTGAATTCA TGTATCACTGATTTTGTATTAAATGAAATGTTTGTTT
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Coding sequence (CDS) from alignment at Vu01:4066590..4071526+

>Vigun01g032200.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g032200.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g032200.1; organism=Vigna unguiculata; type=CDS; length=882bp; location=Sequence derived from: Vu01:4066590..4071526+ (Vigna unguiculata
ATGCTGCGTAGAAACATTCGATTGAGGAGAGAGTATTTGTACAGAAAGAG
CTTAGAAGGCAAAGAACGCTTGCTCTATGAAAAGAAACGCAAAATCGGAG
AAGCGCTTCAAGAGGGGAAACCCATTCCCACTGAACTCAGAAATGAGGAA
GCTGCACTTCGACGCCAAATCGACCTTGAAGATGAAAACACTGCTGTTCC
AAGAACGCACATTGATGATGAGTATGCTTATGCTGCGGAAAAGGATCCCA
AGATTTTGTTGACCACTTCCAGGGATCCAAGTGCTCCTCTTCAGCAGTTT
GTAAAGGAGTTGAGTATAGTTTTTCCTAATGCGCAGCGAATGAATCGTGG
TGGTCAGGTTATCTCAGAGATTATAGAATCTTGTCGTGCACATGACTATA
CTGATGTTATTTTGGTTCATGAACATCGTGGTGTACCAGATGGTTTAATT
GTTTGCCATCTACCATTTGGTCCAACTGCATATTTTGGATTACACAATGT
GGTTACAAGGCATGAAATTAAAGACAGGAAAGCTATTGGAACTATGCCTG
AGGCATATCCACATTTGATTCTTGATAACTTCTCAACTAAGTTAGGCGAA
AGGTCAGCGAACATTCTCAAGCATCTTTTTCCCGTGCCAAAACCAGACAC
AAAACGAATTGTCACTTTTTCCAACCAATCTGACTATATCTCGTTCAGGC
ATCATATTTATGAAAAGCACGGAGGCCCTAAATCTGTAGAACTGAAGGAA
ATTGGTCCACGATTTGAGTTACGGCTTTATCAGATAAAGTTGGGAACGGT
GGATCAAGCTGAAGCTCAGATAGAATGGGTCATTAGACCTTACATGAACA
CAACTAAAAAGCGGAAATTTCTCAGTAATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR007109Brix