Vigun01g079400.1

Transcript Overview


Name	Vigun01g079400.1
Unique Name	Vigun01g079400.1_Vu_IT97K-499-35_v1.1
Type	mRNA
Organism	Vigna unguiculata (cowpea)
Sequence length	945

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Vu01	supercontig	Vu01:22470509..22474068 +	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	2019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	2019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot	2019-10-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
vuvuR017	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
psvuL193	Pisum sativum Cameor genome v1a	Pisum sativum
pvvuL009	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pvvuL404	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
cavuL163	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
anvuL0078	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuL0653	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuL0873	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuL1078	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
asvuL209	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
asvuL404	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
asvuL411	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
vuzwsR020	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
tifvuL581	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vfhvuL538	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vrvvuL001	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vrvvuL130	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vrvvuL276	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vssvuL163	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vuvuaR000	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vuvuaR013	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
avjvuL002	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjvuL337	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjvuL343	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carvuL159		Cicer arietinum
ccavuL505	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccavuL559	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
vuvumR029	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vuvumR036	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vuvvaR048	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vstvuL141	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vstvuL307	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vstvuL311	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vasvuL152	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvuL324	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvuL330	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
pvfvuL006	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvuL359	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
vuvunR000	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
vuvunR012	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Orthologs


Gene/Transcript	Assembly	Species
Vigan.11G103500.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Vum_11G00702.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
LR48_mrnaVigan10g172200	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
evm.model.Chr04.1022	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Phvul.001G084000.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
PvulFLAVERTChr01.1000570	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
Va10G044820.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Phvul.004G069900.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Cc_v2.0_15599.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
rna-XM_014649698.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Vigst.11G054500.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
PvulFLAVERTChr04.398	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
Cc_v2.0_18462.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
Vigan.04G230700.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
rna-TanjilR_06084	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vigun01g079400.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
Vigun04g105200.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Vigun04g105200.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vigun01g079400	Vigun01g079400_Vu_IT97K-499-35_v1.1	Vigna unguiculata	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Vigun01g079400.1	Vigun01g079400.1_Vu_IT97K-499-35_v1.1-protein	Vigna unguiculata	polypeptide
Vigun01g079400.1_Vu_IT97K-499-35_v1.1	Vigun01g079400.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vigun01g079400.1.v1.1.CDS.1	Vigun01g079400.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS
Vigun01g079400.1.v1.1.CDS.2	Vigun01g079400.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS
Vigun01g079400.1.v1.1.CDS.3	Vigun01g079400.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS

Homology

[Close]

BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 GN=ERF114 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.068e-29
Identity = 71/108 (65.74%), Postives = 80/108 (74.07%), Query Frame = 1

Query:  241 INTADDSTPSTYGQIPTSTLIETQDPSQH--PLNQG----RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLLAS 546
            I++ DD+ PS Y           QDP+Q   P +Q     R+RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE+AA AYD AALKFKGSKAKLNFPE + L S
Sbjct:   55 ISSIDDNYPSVY---------NPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQLGS 153

[Close]

BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.421e-27
Identity = 60/83 (72.29%), Postives = 67/83 (80.72%), Query Frame = 1

Query:  286 PTSTLIETQDPSQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHL 534
            P    ++  D  Q   +Q R+RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE AA AYD AALKFKG+KAKLNFPE +
Sbjct:   16 PVKQELDKSDQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERV 98

[Close]

BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 GN=ERF115 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 6.208e-27
Identity = 61/68 (89.71%), Postives = 63/68 (92.65%), Query Frame = 1

Query:  343 RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLLAS 546
            RKRHYRGVRQRPWGKWAAEIRDP+KAARVWLGTF+TAEAAA AYD AALKFKGSKAKLNFPE   LAS
Sbjct:   88 RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLAS 155

[Close]

BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.830e-25
Identity = 72/140 (51.43%), Postives = 85/140 (60.71%), Query Frame = 1

Query:  127 GKRPLP--SDHASRENREGFNFPSQQGEEEPSSF--PFVQHPINTADDSTPSTYGQIPTSTLIETQDPSQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHL 534
            GKRPL   S   +RE ++     S   E + S F       PI ++ D   S+       TL E  +         R+R+YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AA AYD AA +F+G KAKLNFPEH+
Sbjct:    4 GKRPLSPESMAGNREEKKELCCCSTLSESDVSDFVSELTGQPIPSSIDDQSSSL------TLQEKSN--------SRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHI 129

[Close]

BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.353e-22
Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 1

Query:  343 RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLL 540
            +KR YRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAA AYD AAL+F+G+KAKLNFPE + +
Sbjct:   73 KKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRI 138

[Close]

BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.676e-22
Identity = 54/69 (78.26%), Postives = 61/69 (88.41%), Query Frame = 1

Query:  343 RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLLASI 549
            R + YRGVRQRPWGKWAAEIRDP KA RVWLGTF+TAEAAA AYDAAAL+F+GSKAKLNFPE++   +I
Sbjct:   57 RPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENVGTQTI 125

[Close]

BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 GN=ERF071 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.604e-19
Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 1

Query:  343 RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFP 525
            RK  YRG+RQRPWGKWAAEIRDP K  RVWLGTF TA+ AA AYD AA+K +G KAKLNFP
Sbjct:   46 RKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFP 106

[Close]

BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.292e-18
Identity = 56/99 (56.57%), Postives = 65/99 (65.66%), Query Frame = 1

Query:  256 DSTPSTYGQIPTSTLIETQDP-------SQHPLNQ-GRKRHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFP 525
            D+  ST     TSTL + + P       +  P+ Q   +RHYRGVR+RPWGK+AAEIRDP KK  RVWLGTFDTA  AA  YD AA K +GSKA LNFP
Sbjct:   31 DTFASTIHHCTTSTLSQRKPPLATIAVPTTAPVVQENDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129

[Close]

BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702 GN=RAP2-12 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.358e-18
Identity = 49/76 (64.47%), Postives = 61/76 (80.26%), Query Frame = 1

Query:  319 SQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLLAS 546
            ++   N+ RK  YRG+RQRPWGKWAAEIRDP++ AR+WLGTF TAE AA AYDAAA + +GSKAK+NFPE  + A+
Sbjct:  113 AEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKAN 188

[Close]

BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 GN=RAP2-2 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 3.856e-18
Identity = 55/109 (50.46%), Postives = 71/109 (65.14%), Query Frame = 1

Query:  208 EPSSFPFVQHPINTADDSTP-STYGQIPTSTLIETQDPSQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEH 531
            +P  F     P+ +A  ST     G       +E+ + ++    + RK  YRG+RQRPWGKWAAEIRDP+K +R WLGTFDTAE AA AYDAAA + +G+KAK+NFPE 
Sbjct:   78 KPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEE 186

The following BLAST results are available for this feature:

BLAST of Vigun01g079400.1 vs. DB:Swiss

BLAST of Vigun01g079400.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
EF114_ARATH	2.068e-29	65.74	Ethylene-responsive transcription factor ERF114 OS...	[more]
EF113_ARATH	3.421e-27	72.29	Ethylene-responsive transcription factor ERF113 OS...	[more]
EF115_ARATH	6.208e-27	89.71	Ethylene-responsive transcription factor ERF115 OS...	[more]
EF112_ARATH	1.830e-25	51.43	Ethylene-responsive transcription factor ERF112 OS...	[more]
EF110_ARATH	1.353e-22	80.30	Ethylene-responsive transcription factor ERF110 OS...	[more]
RAP26_ARATH	3.676e-22	78.26	Ethylene-responsive transcription factor RAP2-6 OS...	[more]
ERF71_ARATH	2.604e-19	75.41	Ethylene-responsive transcription factor ERF071 OS...	[more]
EF105_ARATH	1.292e-18	56.57	Ethylene-responsive transcription factor ERF105 OS...	[more]
RA212_ARATH	2.358e-18	64.47	Ethylene-responsive transcription factor RAP2-12 O...	[more]
RAP22_ARATH	3.856e-18	50.46	Ethylene-responsive transcription factor RAP2-2 OS...	[more]

InterPro

Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 141..157 score: 70.05 coord: 119..130 score: 76.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 118..181 e-value: 1.0E-37 score: 141.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 118..167 e-value: 3.2E-13 score: 49.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 118..175 score: 25.264
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 118..177 e-value: 9.13898E-23 score: 87.3271
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10		coord: 117..177 e-value: 1.2E-31 score: 110.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..203
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 118..176

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Vu01:22470509..22474068+
coding sequence from alignment at Vu01:22470509..22474068+

mRNA sequence

>Vigun01g079400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g079400.1; organism=Vigna unguiculata; type=mRNA; length=945bp
atgaaggtttcttcattgaggcttagtgttaacattgttgctcagccgca
aggctcacatttgaatctttactcaaccgctttcaAAGAACCTTTCATAG
AATTGAACAAGGTGGATCGAAGGCATGGAAAGAGGCCTCTCCCTTCTGAT
CATGCATCAAGGGAGAATAGGGAAGGTTTCAACTTCCCTAGCCAACAAGG
GGAGGAAGAACCTTCTTCATTCCCCTTTGTTCAACATCCAATCAATACTG
CAGATGATAGCACCCCTTCTACATATGGCCAAATACCCACTTCTACCTTG
ATTGAGACACAGGACCCATCTCAGCACCCTTTAAATCAAGGGAGAAAAAG
ACACTATCGTGGAGTTCGGCAGAGACCGTGGGGGAAATGGGCTGCCGAAA
TCCGCGACCCTAAAAAGGCTGCTAGAGTGTGGCTTGGCACGTTTGACACG
GCAGAGgctgcagctgctgcttatgatgctgctgctTTGAAGTTCAAAGG
ATCCAAAGCAAAGCTCAATTTCCCTGAACACCTTCTTCTTGCTTCAATAC
CACCTTCTTCACCTTCATCTTCACCTTCACCTCAAACTATTAACACCAAT
AACAGTTATTATGCTTCTTTTTCTTCACCTCTTGCACCTCATGcaccaac
accatcaccaccaccaccactttatcaaccacaacccttaccatcacAGG
AAGAAGCGTTTCCAAACCTAATGCAGTACGCACAGCTTCTTTGGAGTAGG
GACGATGATGATCTACAACGTGTTGCTTCAGGCCTTCACCATGACTCTTT
CTACGATTCCAGTTCTTCAACTTTGTTCTCTTCCTCCTCCACTTCTTCTG
TTGTGACTGAATCTGATCAACGGATTGGAGGTGACACCAGTGGCTTCAAG
GATTCTTGCTTTTCTAGAGGGAGTGATTTTCATGCCAAGAATTGA

protein sequence of Vigun01g079400.1_Vu_IT97K-499-35_v1.1

>Vigun01g079400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=315bp
MKVSSLRLSVNIVAQPQGSHLNLYSTAFKEPFIELNKVDRRHGKRPLPSD
HASRENREGFNFPSQQGEEEPSSFPFVQHPINTADDSTPSTYGQIPTSTL
IETQDPSQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT
AEAAAAAYDAAALKFKGSKAKLNFPEHLLLASIPPSSPSSSPSPQTINTN
NSYYASFSSPLAPHAPTPSPPPPLYQPQPLPSQEEAFPNLMQYAQLLWSR
DDDDLQRVASGLHHDSFYDSSSSTLFSSSSTSSVVTESDQRIGGDTSGFK
DSCFSRGSDFHAKN*

mRNA from alignment at Vu01:22470509..22474068+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Vigun01g079400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g079400.1; organism=Vigna unguiculata; type=mRNA; length=3560bp; location=Sequence derived from: Vu01:22470509..22474068+ (Vigna unguiculata
ATGAAGGTTTCTTCATTGAGGCTTAGTGTTAACATTGTTGCTCAGCCGCA
AGGCTCACATTTGAATCTTTACTCAACCGCTTTCAGTGTTCAACATCAGC
TTTGGGGCTCGGCGTTATATGCCTTAATACCTTTGAAAATATCCGCAAAA
ATATCACAAACACATCAGTTTTCAATTTTCTTACTTCTCTACTTCTCATT
TTGTGATTTAAAGTAAAAATGGCTTGTTTTTCCCAAGAACTATATTTAAT
TCATACATGATAACTGTCTCCCTAAACTATAACATAAAATTAGAATTGGT
CCCTGCTTGAAAATTTGATTATGTTTGGTTCCCTAACTTTAGAAGGCCAT
GGATTTAGTCTCCCCTAAAACTCTAAATCAACACTAGGCTTCAACTGGTG
TCCACTTATTGCTTTTTGCATCCGCTTTTTTTCGATGCTATTCTTCAACA
TTCTTGTAAGTGATTTCTCTTCTTTGGTTATTTTCTTTTTAATTAAAAAC
TTTTATTATATTTTCTTAAAAAAATAGAAAACATAAGAACGAATGAGTAA
AATTTAATATATATATATATATATATATATATATATATATATAATTGCAT
TTTTAGTTATAAATTAACTTCAACTTAACACAAATATCTAATTGTAAATA
TGGATTAAATTGAAATTGTAAATATTCGAGGTTGTAGGATAAAAAATCGC
TTATAAAAAGAAGTTGTAGTTCTATGTGCCAATTGTAAATAGTTGATCTT
TATACTATTGAAATACAATTATCAAATTTATGATGTTCTATGAATTTAAC
TTGTAGTATTCAGGTCAACCGGGAAGCTATGAGTGTGAATATTATGTGGT
CAGGCACATGCATAGAATTATATTTGCAAACATTGTTGACTCAAAGATTA
AGTATTAAGTATTTAGTATTCAAAGATTGTTGACTCAAACTGTTTATTGT
GTAAATTTTCAATAACGCGTAAAAGTCTTAAAGGAAGACGATGTTAGGTA
TTTTGTTAGTTTTAATGTAAATATTATATGTATAATCATTAGGTTAGGAT
TATATATTTGATGTAAATATTAGATTGAATTTCATGTAAATATTAGGTTA
GGATTACATTACAACTTTGAAAGAAAATATACATTTGTAGTTGTTCGGGA
TAATTATATGCAGGTTATGTATATGGTAAGGAGCACAAACGAATTTGTTA
TTTTAAAAAAAGTCACTTTTTATATTGGTTACACTAAAAAAAATGATATC
TAGTGGTTGTTATTTTGCGGAGGTTATAAAAAACCCCACAAATTAGCATA
AGCTTATAAAAAACCTTTATAAATTAACATAATTTAGGATGGTCTAGTAA
ATTGTCTAAAATGATAATAATAGTGACATTTTTGTATTCTATTTGTAGTG
TTAAGGCCTCAACCAGTATAAAAAGTGCCTTTTTTTATATCAGTTAAGGC
CACAATGGACATTTTCTATATTGATTATGGCCTTAACCGATATAAAAAAA
GACACTTTTATATACCGATTATGACCTAAAGTGATATAAAAAGTCACTTT
TATTACATAATTTTTCTTTTCCTAATGGATTTTTTATACTAATTTCAAAA
CTGGTATAGAAAATGAACATTCTTTATCGCCTATATTTATACTGAATCTG
GAATCGATATAGAAAATCTTTTTTAACCGACATAAACAAATTTCCCTGGA
CTAGGTTAGAAAAAAAAAACAAAGGAACCTAATTGCTCTTCCTTCTATGG
ACTAACAAAACTCACTAGCTCTTTTTCTCTCTCTCATTTCCCATGGAGAA
TTGAACCCTATCTCAAAGTAACAAACAAGCAAGGTTATCTTTTGCTTTTT
CCCTTCTAGTAAATATTCGTTTTTTTTTTTAACTCGTCTTTCTTATTTAA
AAGATGATGGGGGCAAGAGTATCCTTCTTTTGATATTGGTTTCATTCATA
TTCCATCACTCTTCTCTATAAGAAATTCTAGATCTGCTTTATAAGAAGGC
ATATATAGCAGCAAGGTTCTCACCAAGAGCAAGAAAAGAGGTTAATCAAT
TCAGTGTGTTGATAGGTAAAAGACTTCTACAGAAGAACCTTTCATAGAAT
TGAACAAGGTGGATCGAAGGCATGGAAAGAGGCCTCTCCCTTCTGATCAT
GCATCAAGGGAGAATAGGGAAGGTTTCAACTTCCCTAGCCAACAAGGGGA
GGAAGAACCTTCTTCATTCCCCTTTGTTCAACATCCAATCAATACTGCAG
ATGATAGCACCCCTTCTACATATGGCCAAATACCCACTTCTACCTTGATT
GAGACACAGGACCCATCTCAGCACCCTTTAAATCAAGGTAAAAAATTTGC
CAGGTTCATGCACTATCTTTATATTTTTCAATTTATATATTCATCTATGT
CATACTATGCAACCCTATTTGTCAAAGATTTCACCAGGATCACTTTCTGT
TCTCCTTTTTCAACTCCACACATATCTATATAGAAGTAGATTCTACAGAG
ATCTACTTATTTAAATGGGGTTTCAAAATATTTATGATTTTTTTTTTTGG
CATCACTAGCACGAGTGCAATTTCCAAATCTGAATTGAAAAACAGAAAAA
GAAAAATGAGGACATGTATGTCTTCTCTTTTTCTAAAAGGGTTGTTGGTT
TGATGCACATGTAAAATATGTGTTTTAAACTTGCAAAGATAAACCAGTTG
AAATGACACTCTCTAACACTCTCTTTATGTATCGATCTTGATCCCTTGAA
TGTTATTCTACAAGGTTGGTGTGGTGTGTATGTTGTTATAATGATTGTGG
GGACAAAGAGTTAGGTATTTTCAGTGAGCAATATTTTCCATTGGTGCTTT
AATTTGTTAGGGTGGCTGTGTTTTGGTAAATGAGAAATTGGACGAAACGA
AAAGAAAAGTGTGTGTGTGTGCCTAACCAAAGCATTGTTGTGCAATAATT
GAAAGGGAGAAAAAGACACTATCGTGGAGTTCGGCAGAGACCGTGGGGGA
AATGGGCTGCCGAAATCCGCGACCCTAAAAAGGCTGCTAGAGTGTGGCTT
GGCACGTTTGACACGGCAGAGGCTGCAGCTGCTGCTTATGATGCTGCTGC
TTTGAAGTTCAAAGGATCCAAAGCAAAGCTCAATTTCCCTGAACACCTTC
TTCTTGCTTCAATACCACCTTCTTCACCTTCATCTTCACCTTCACCTCAA
ACTATTAACACCAATAACAGTTATTATGCTTCTTTTTCTTCACCTCTTGC
ACCTCATGCACCAACACCATCACCACCACCACCACTTTATCAACCACAAC
CCTTACCATCACAGGAAGAAGCGTTTCCAAACCTAATGCAGTACGCACAG
CTTCTTTGGAGTAGGGACGATGATGATCTACAACGTGTTGCTTCAGGCCT
TCACCATGACTCTTTCTACGATTCCAGTTCTTCAACTTTGTTCTCTTCCT
CCTCCACTTCTTCTGTTGTGACTGAATCTGATCAACGGATTGGAGGTGAC
ACCAGTGGCTTCAAGGATTCTTGCTTTTCTAGAGGGAGTGATTTTCATGC
CAAGAATTGA

Coding sequence (CDS) from alignment at Vu01:22470509..22474068+

>Vigun01g079400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g079400.1; organism=Vigna unguiculata; type=CDS; length=945bp; location=Sequence derived from: Vu01:22470509..22474068+ (Vigna unguiculata
ATGAAGGTTTCTTCATTGAGGCTTAGTGTTAACATTGTTGCTCAGCCGCA
AGGCTCACATTTGAATCTTTACTCAACCGCTTTCAAAGAACCTTTCATAG
AATTGAACAAGGTGGATCGAAGGCATGGAAAGAGGCCTCTCCCTTCTGAT
CATGCATCAAGGGAGAATAGGGAAGGTTTCAACTTCCCTAGCCAACAAGG
GGAGGAAGAACCTTCTTCATTCCCCTTTGTTCAACATCCAATCAATACTG
CAGATGATAGCACCCCTTCTACATATGGCCAAATACCCACTTCTACCTTG
ATTGAGACACAGGACCCATCTCAGCACCCTTTAAATCAAGGGAGAAAAAG
ACACTATCGTGGAGTTCGGCAGAGACCGTGGGGGAAATGGGCTGCCGAAA
TCCGCGACCCTAAAAAGGCTGCTAGAGTGTGGCTTGGCACGTTTGACACG
GCAGAGGCTGCAGCTGCTGCTTATGATGCTGCTGCTTTGAAGTTCAAAGG
ATCCAAAGCAAAGCTCAATTTCCCTGAACACCTTCTTCTTGCTTCAATAC
CACCTTCTTCACCTTCATCTTCACCTTCACCTCAAACTATTAACACCAAT
AACAGTTATTATGCTTCTTTTTCTTCACCTCTTGCACCTCATGCACCAAC
ACCATCACCACCACCACCACTTTATCAACCACAACCCTTACCATCACAGG
AAGAAGCGTTTCCAAACCTAATGCAGTACGCACAGCTTCTTTGGAGTAGG
GACGATGATGATCTACAACGTGTTGCTTCAGGCCTTCACCATGACTCTTT
CTACGATTCCAGTTCTTCAACTTTGTTCTCTTCCTCCTCCACTTCTTCTG
TTGTGACTGAATCTGATCAACGGATTGGAGGTGACACCAGTGGCTTCAAG
GATTCTTGCTTTTCTAGAGGGAGTGATTTTCATGCCAAGAATTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR036955	AP2/ERF_dom_sf
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	DNA-binding transcription factor activity
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of DNA-templated transcription

Search form

Vigun01g079400.1