Vigun01g079400.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 GN=ERF114 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.068e-29 Identity = 71/108 (65.74%), Postives = 80/108 (74.07%), Query Frame = 1 Query: 241 INTADDSTPSTYGQIPTSTLIETQDPSQH--PLNQG----RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLLAS 546 I++ DD+ PS Y QDP+Q P +Q R+RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE+AA AYD AALKFKGSKAKLNFPE + L S Sbjct: 55 ISSIDDNYPSVY---------NPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQLGS 153
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.421e-27 Identity = 60/83 (72.29%), Postives = 67/83 (80.72%), Query Frame = 1 Query: 286 PTSTLIETQDPSQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHL 534 P ++ D Q +Q R+RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE AA AYD AALKFKG+KAKLNFPE + Sbjct: 16 PVKQELDKSDQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERV 98
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 GN=ERF115 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 6.208e-27 Identity = 61/68 (89.71%), Postives = 63/68 (92.65%), Query Frame = 1 Query: 343 RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLLAS 546 RKRHYRGVRQRPWGKWAAEIRDP+KAARVWLGTF+TAEAAA AYD AALKFKGSKAKLNFPE LAS Sbjct: 88 RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLAS 155
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.830e-25 Identity = 72/140 (51.43%), Postives = 85/140 (60.71%), Query Frame = 1 Query: 127 GKRPLP--SDHASRENREGFNFPSQQGEEEPSSF--PFVQHPINTADDSTPSTYGQIPTSTLIETQDPSQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHL 534 GKRPL S +RE ++ S E + S F PI ++ D S+ TL E + R+R+YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AA AYD AA +F+G KAKLNFPEH+ Sbjct: 4 GKRPLSPESMAGNREEKKELCCCSTLSESDVSDFVSELTGQPIPSSIDDQSSSL------TLQEKSN--------SRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHI 129
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.353e-22 Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 1 Query: 343 RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLL 540 +KR YRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAA AYD AAL+F+G+KAKLNFPE + + Sbjct: 73 KKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRI 138
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.676e-22 Identity = 54/69 (78.26%), Postives = 61/69 (88.41%), Query Frame = 1 Query: 343 RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLLASI 549 R + YRGVRQRPWGKWAAEIRDP KA RVWLGTF+TAEAAA AYDAAAL+F+GSKAKLNFPE++ +I Sbjct: 57 RPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENVGTQTI 125
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 GN=ERF071 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.604e-19 Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 1 Query: 343 RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFP 525 RK YRG+RQRPWGKWAAEIRDP K RVWLGTF TA+ AA AYD AA+K +G KAKLNFP Sbjct: 46 RKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFP 106
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.292e-18 Identity = 56/99 (56.57%), Postives = 65/99 (65.66%), Query Frame = 1 Query: 256 DSTPSTYGQIPTSTLIETQDP-------SQHPLNQ-GRKRHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFP 525 D+ ST TSTL + + P + P+ Q +RHYRGVR+RPWGK+AAEIRDP KK RVWLGTFDTA AA YD AA K +GSKA LNFP Sbjct: 31 DTFASTIHHCTTSTLSQRKPPLATIAVPTTAPVVQENDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702 GN=RAP2-12 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.358e-18 Identity = 49/76 (64.47%), Postives = 61/76 (80.26%), Query Frame = 1 Query: 319 SQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLLAS 546 ++ N+ RK YRG+RQRPWGKWAAEIRDP++ AR+WLGTF TAE AA AYDAAA + +GSKAK+NFPE + A+ Sbjct: 113 AEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKAN 188
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 GN=RAP2-2 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 3.856e-18 Identity = 55/109 (50.46%), Postives = 71/109 (65.14%), Query Frame = 1 Query: 208 EPSSFPFVQHPINTADDSTP-STYGQIPTSTLIETQDPSQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEH 531 +P F P+ +A ST G +E+ + ++ + RK YRG+RQRPWGKWAAEIRDP+K +R WLGTFDTAE AA AYDAAA + +G+KAK+NFPE Sbjct: 78 KPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEE 186 The following BLAST results are available for this feature:
BLAST of Vigun01g079400.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun01g079400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g079400.1; organism=Vigna unguiculata; type=mRNA; length=945bpback to top protein sequence of Vigun01g079400.1_Vu_IT97K-499-35_v1.1 >Vigun01g079400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=315bpback to top mRNA from alignment at Vu01:22470509..22474068+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun01g079400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g079400.1; organism=Vigna unguiculata; type=mRNA; length=3560bp; location=Sequence derived from: Vu01:22470509..22474068+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu01:22470509..22474068+ >Vigun01g079400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g079400.1; organism=Vigna unguiculata; type=CDS; length=945bp; location=Sequence derived from: Vu01:22470509..22474068+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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