Vigun01g079400.1

Transcript Overview
NameVigun01g079400.1
Unique NameVigun01g079400.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length945
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:22470509..22474068 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR017Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL193Pisum sativum Cameor genome v1aPisum sativum
pvvuL009Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL404Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL163Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anvuL0078Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0653Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0873Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1078Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL209Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL404Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL411Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR020Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL581Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL538Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL001Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL130Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL276Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL163Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR000Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR013Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
avjvuL002Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL337Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL343Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL159Cicer arietinum
ccavuL505Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL559Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR029Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR036Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR048Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL141Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL307Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL311Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL152Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL324Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL330Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL006Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL359Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR012Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigan.11G103500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vum_11G00702.1Vigna umbellata FF25 genome v1.0Vigna umbellata
LR48_mrnaVigan10g172200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr04.1022Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.001G084000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr01.1000570Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Va10G044820.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.004G069900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cc_v2.0_15599.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_014649698.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigst.11G054500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
PvulFLAVERTChr04.398Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_18462.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigan.04G230700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-TanjilR_06084Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun01g079400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun04g105200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun04g105200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g079400Vigun01g079400_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g079400.1Vigun01g079400.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g079400.1_Vu_IT97K-499-35_v1.1Vigun01g079400.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g079400.1.v1.1.CDS.1Vigun01g079400.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g079400.1.v1.1.CDS.2Vigun01g079400.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g079400.1.v1.1.CDS.3Vigun01g079400.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


Homology
[Close]
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 GN=ERF114 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.068e-29
Identity = 71/108 (65.74%), Postives = 80/108 (74.07%), Query Frame = 1 
Query:  241 INTADDSTPSTYGQIPTSTLIETQDPSQH--PLNQG----RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLLAS 546
            I++ DD+ PS Y           QDP+Q   P +Q     R+RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE+AA AYD AALKFKGSKAKLNFPE + L S
Sbjct:   55 ISSIDDNYPSVY---------NPQDPNQQVAPTHQDQGDLRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQLGS 153
[Close]
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.421e-27
Identity = 60/83 (72.29%), Postives = 67/83 (80.72%), Query Frame = 1 
Query:  286 PTSTLIETQDPSQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHL 534
            P    ++  D  Q   +Q R+RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE AA AYD AALKFKG+KAKLNFPE +
Sbjct:   16 PVKQELDKSDQHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERV 98
[Close]
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 GN=ERF115 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 6.208e-27
Identity = 61/68 (89.71%), Postives = 63/68 (92.65%), Query Frame = 1 
Query:  343 RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLLAS 546
            RKRHYRGVRQRPWGKWAAEIRDP+KAARVWLGTF+TAEAAA AYD AALKFKGSKAKLNFPE   LAS
Sbjct:   88 RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLAS 155
[Close]
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.830e-25
Identity = 72/140 (51.43%), Postives = 85/140 (60.71%), Query Frame = 1 
Query:  127 GKRPLP--SDHASRENREGFNFPSQQGEEEPSSF--PFVQHPINTADDSTPSTYGQIPTSTLIETQDPSQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHL 534
            GKRPL   S   +RE ++     S   E + S F       PI ++ D   S+       TL E  +         R+R+YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AA AYD AA +F+G KAKLNFPEH+
Sbjct:    4 GKRPLSPESMAGNREEKKELCCCSTLSESDVSDFVSELTGQPIPSSIDDQSSSL------TLQEKSN--------SRQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHI 129
[Close]
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.353e-22
Identity = 53/66 (80.30%), Postives = 60/66 (90.91%), Query Frame = 1 
Query:  343 RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLL 540
            +KR YRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAA AYD AAL+F+G+KAKLNFPE + +
Sbjct:   73 KKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRI 138
[Close]
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.676e-22
Identity = 54/69 (78.26%), Postives = 61/69 (88.41%), Query Frame = 1 
Query:  343 RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLLASI 549
            R + YRGVRQRPWGKWAAEIRDP KA RVWLGTF+TAEAAA AYDAAAL+F+GSKAKLNFPE++   +I
Sbjct:   57 RPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPENVGTQTI 125
[Close]
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 GN=ERF071 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.604e-19
Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 1 
Query:  343 RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFP 525
            RK  YRG+RQRPWGKWAAEIRDP K  RVWLGTF TA+ AA AYD AA+K +G KAKLNFP
Sbjct:   46 RKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFP 106
[Close]
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.292e-18
Identity = 56/99 (56.57%), Postives = 65/99 (65.66%), Query Frame = 1 
Query:  256 DSTPSTYGQIPTSTLIETQDP-------SQHPLNQ-GRKRHYRGVRQRPWGKWAAEIRDP-KKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFP 525
            D+  ST     TSTL + + P       +  P+ Q   +RHYRGVR+RPWGK+AAEIRDP KK  RVWLGTFDTA  AA  YD AA K +GSKA LNFP
Sbjct:   31 DTFASTIHHCTTSTLSQRKPPLATIAVPTTAPVVQENDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFP 129
[Close]
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702 GN=RAP2-12 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.358e-18
Identity = 49/76 (64.47%), Postives = 61/76 (80.26%), Query Frame = 1 
Query:  319 SQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEHLLLAS 546
            ++   N+ RK  YRG+RQRPWGKWAAEIRDP++ AR+WLGTF TAE AA AYDAAA + +GSKAK+NFPE  + A+
Sbjct:  113 AEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKAN 188
[Close]
BLAST of Vigun01g079400.1 vs. DB:Swiss
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana OX=3702 GN=RAP2-2 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 3.856e-18
Identity = 55/109 (50.46%), Postives = 71/109 (65.14%), Query Frame = 1 
Query:  208 EPSSFPFVQHPINTADDSTP-STYGQIPTSTLIETQDPSQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTXXXXXXXXXXXXLKFKGSKAKLNFPEH 531
            +P  F     P+ +A  ST     G       +E+ + ++    + RK  YRG+RQRPWGKWAAEIRDP+K +R WLGTFDTAE AA AYDAAA + +G+KAK+NFPE 
Sbjct:   78 KPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEE 186
The following BLAST results are available for this feature:
BLAST of Vigun01g079400.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
EF114_ARATH2.068e-2965.74Ethylene-responsive transcription factor ERF114 OS... [more]
EF113_ARATH3.421e-2772.29Ethylene-responsive transcription factor ERF113 OS... [more]
EF115_ARATH6.208e-2789.71Ethylene-responsive transcription factor ERF115 OS... [more]
EF112_ARATH1.830e-2551.43Ethylene-responsive transcription factor ERF112 OS... [more]
EF110_ARATH1.353e-2280.30Ethylene-responsive transcription factor ERF110 OS... [more]
RAP26_ARATH3.676e-2278.26Ethylene-responsive transcription factor RAP2-6 OS... [more]
ERF71_ARATH2.604e-1975.41Ethylene-responsive transcription factor ERF071 OS... [more]
EF105_ARATH1.292e-1856.57Ethylene-responsive transcription factor ERF105 OS... [more]
RA212_ARATH2.358e-1864.47Ethylene-responsive transcription factor RAP2-12 O... [more]
RAP22_ARATH3.856e-1850.46Ethylene-responsive transcription factor RAP2-2 OS... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 141..157
score: 70.05
coord: 119..130
score: 76.67
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 118..181
e-value: 1.0E-37
score: 141.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 118..167
e-value: 3.2E-13
score: 49.7
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 118..175
score: 25.264
IPR001471AP2/ERF domainCDDcd00018AP2coord: 118..177
e-value: 9.13898E-23
score: 87.3271
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 117..177
e-value: 1.2E-31
score: 110.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..203
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 118..176

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g079400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g079400.1; organism=Vigna unguiculata; type=mRNA; length=945bp
atgaaggtttcttcattgaggcttagtgttaacattgttgctcagccgca
aggctcacatttgaatctttactcaaccgctttcaAAGAACCTTTCATAG
AATTGAACAAGGTGGATCGAAGGCATGGAAAGAGGCCTCTCCCTTCTGAT
CATGCATCAAGGGAGAATAGGGAAGGTTTCAACTTCCCTAGCCAACAAGG
GGAGGAAGAACCTTCTTCATTCCCCTTTGTTCAACATCCAATCAATACTG
CAGATGATAGCACCCCTTCTACATATGGCCAAATACCCACTTCTACCTTG
ATTGAGACACAGGACCCATCTCAGCACCCTTTAAATCAAGGGAGAAAAAG
ACACTATCGTGGAGTTCGGCAGAGACCGTGGGGGAAATGGGCTGCCGAAA
TCCGCGACCCTAAAAAGGCTGCTAGAGTGTGGCTTGGCACGTTTGACACG
GCAGAGgctgcagctgctgcttatgatgctgctgctTTGAAGTTCAAAGG
ATCCAAAGCAAAGCTCAATTTCCCTGAACACCTTCTTCTTGCTTCAATAC
CACCTTCTTCACCTTCATCTTCACCTTCACCTCAAACTATTAACACCAAT
AACAGTTATTATGCTTCTTTTTCTTCACCTCTTGCACCTCATGcaccaac
accatcaccaccaccaccactttatcaaccacaacccttaccatcacAGG
AAGAAGCGTTTCCAAACCTAATGCAGTACGCACAGCTTCTTTGGAGTAGG
GACGATGATGATCTACAACGTGTTGCTTCAGGCCTTCACCATGACTCTTT
CTACGATTCCAGTTCTTCAACTTTGTTCTCTTCCTCCTCCACTTCTTCTG
TTGTGACTGAATCTGATCAACGGATTGGAGGTGACACCAGTGGCTTCAAG
GATTCTTGCTTTTCTAGAGGGAGTGATTTTCATGCCAAGAATTGA
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protein sequence of Vigun01g079400.1_Vu_IT97K-499-35_v1.1

>Vigun01g079400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=315bp
MKVSSLRLSVNIVAQPQGSHLNLYSTAFKEPFIELNKVDRRHGKRPLPSD
HASRENREGFNFPSQQGEEEPSSFPFVQHPINTADDSTPSTYGQIPTSTL
IETQDPSQHPLNQGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDT
AEAAAAAYDAAALKFKGSKAKLNFPEHLLLASIPPSSPSSSPSPQTINTN
NSYYASFSSPLAPHAPTPSPPPPLYQPQPLPSQEEAFPNLMQYAQLLWSR
DDDDLQRVASGLHHDSFYDSSSSTLFSSSSTSSVVTESDQRIGGDTSGFK
DSCFSRGSDFHAKN*
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mRNA from alignment at Vu01:22470509..22474068+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g079400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g079400.1; organism=Vigna unguiculata; type=mRNA; length=3560bp; location=Sequence derived from: Vu01:22470509..22474068+ (Vigna unguiculata
ATGAAGGTTTCTTCATTGAGGCTTAGTGTTAACATTGTTGCTCAGCCGCA
AGGCTCACATTTGAATCTTTACTCAACCGCTTTCAGTGTTCAACATCAGC
TTTGGGGCTCGGCGTTATATGCCTTAATACCTTTGAAAATATCCGCAAAA
ATATCACAAACACATCAGTTTTCAATTTTCTTACTTCTCTACTTCTCATT
TTGTGATTTAAAGTAAAAATGGCTTGTTTTTCCCAAGAACTATATTTAAT
TCATACATGATAACTGTCTCCCTAAACTATAACATAAAATTAGAATTGGT
CCCTGCTTGAAAATTTGATTATGTTTGGTTCCCTAACTTTAGAAGGCCAT
GGATTTAGTCTCCCCTAAAACTCTAAATCAACACTAGGCTTCAACTGGTG
TCCACTTATTGCTTTTTGCATCCGCTTTTTTTCGATGCTATTCTTCAACA
TTCTTGTAAGTGATTTCTCTTCTTTGGTTATTTTCTTTTTAATTAAAAAC
TTTTATTATATTTTCTTAAAAAAATAGAAAACATAAGAACGAATGAGTAA
AATTTAATATATATATATATATATATATATATATATATATATAATTGCAT
TTTTAGTTATAAATTAACTTCAACTTAACACAAATATCTAATTGTAAATA
TGGATTAAATTGAAATTGTAAATATTCGAGGTTGTAGGATAAAAAATCGC
TTATAAAAAGAAGTTGTAGTTCTATGTGCCAATTGTAAATAGTTGATCTT
TATACTATTGAAATACAATTATCAAATTTATGATGTTCTATGAATTTAAC
TTGTAGTATTCAGGTCAACCGGGAAGCTATGAGTGTGAATATTATGTGGT
CAGGCACATGCATAGAATTATATTTGCAAACATTGTTGACTCAAAGATTA
AGTATTAAGTATTTAGTATTCAAAGATTGTTGACTCAAACTGTTTATTGT
GTAAATTTTCAATAACGCGTAAAAGTCTTAAAGGAAGACGATGTTAGGTA
TTTTGTTAGTTTTAATGTAAATATTATATGTATAATCATTAGGTTAGGAT
TATATATTTGATGTAAATATTAGATTGAATTTCATGTAAATATTAGGTTA
GGATTACATTACAACTTTGAAAGAAAATATACATTTGTAGTTGTTCGGGA
TAATTATATGCAGGTTATGTATATGGTAAGGAGCACAAACGAATTTGTTA
TTTTAAAAAAAGTCACTTTTTATATTGGTTACACTAAAAAAAATGATATC
TAGTGGTTGTTATTTTGCGGAGGTTATAAAAAACCCCACAAATTAGCATA
AGCTTATAAAAAACCTTTATAAATTAACATAATTTAGGATGGTCTAGTAA
ATTGTCTAAAATGATAATAATAGTGACATTTTTGTATTCTATTTGTAGTG
TTAAGGCCTCAACCAGTATAAAAAGTGCCTTTTTTTATATCAGTTAAGGC
CACAATGGACATTTTCTATATTGATTATGGCCTTAACCGATATAAAAAAA
GACACTTTTATATACCGATTATGACCTAAAGTGATATAAAAAGTCACTTT
TATTACATAATTTTTCTTTTCCTAATGGATTTTTTATACTAATTTCAAAA
CTGGTATAGAAAATGAACATTCTTTATCGCCTATATTTATACTGAATCTG
GAATCGATATAGAAAATCTTTTTTAACCGACATAAACAAATTTCCCTGGA
CTAGGTTAGAAAAAAAAAACAAAGGAACCTAATTGCTCTTCCTTCTATGG
ACTAACAAAACTCACTAGCTCTTTTTCTCTCTCTCATTTCCCATGGAGAA
TTGAACCCTATCTCAAAGTAACAAACAAGCAAGGTTATCTTTTGCTTTTT
CCCTTCTAGTAAATATTCGTTTTTTTTTTTAACTCGTCTTTCTTATTTAA
AAGATGATGGGGGCAAGAGTATCCTTCTTTTGATATTGGTTTCATTCATA
TTCCATCACTCTTCTCTATAAGAAATTCTAGATCTGCTTTATAAGAAGGC
ATATATAGCAGCAAGGTTCTCACCAAGAGCAAGAAAAGAGGTTAATCAAT
TCAGTGTGTTGATAGGTAAAAGACTTCTACAGAAGAACCTTTCATAGAAT
TGAACAAGGTGGATCGAAGGCATGGAAAGAGGCCTCTCCCTTCTGATCAT
GCATCAAGGGAGAATAGGGAAGGTTTCAACTTCCCTAGCCAACAAGGGGA
GGAAGAACCTTCTTCATTCCCCTTTGTTCAACATCCAATCAATACTGCAG
ATGATAGCACCCCTTCTACATATGGCCAAATACCCACTTCTACCTTGATT
GAGACACAGGACCCATCTCAGCACCCTTTAAATCAAGGTAAAAAATTTGC
CAGGTTCATGCACTATCTTTATATTTTTCAATTTATATATTCATCTATGT
CATACTATGCAACCCTATTTGTCAAAGATTTCACCAGGATCACTTTCTGT
TCTCCTTTTTCAACTCCACACATATCTATATAGAAGTAGATTCTACAGAG
ATCTACTTATTTAAATGGGGTTTCAAAATATTTATGATTTTTTTTTTTGG
CATCACTAGCACGAGTGCAATTTCCAAATCTGAATTGAAAAACAGAAAAA
GAAAAATGAGGACATGTATGTCTTCTCTTTTTCTAAAAGGGTTGTTGGTT
TGATGCACATGTAAAATATGTGTTTTAAACTTGCAAAGATAAACCAGTTG
AAATGACACTCTCTAACACTCTCTTTATGTATCGATCTTGATCCCTTGAA
TGTTATTCTACAAGGTTGGTGTGGTGTGTATGTTGTTATAATGATTGTGG
GGACAAAGAGTTAGGTATTTTCAGTGAGCAATATTTTCCATTGGTGCTTT
AATTTGTTAGGGTGGCTGTGTTTTGGTAAATGAGAAATTGGACGAAACGA
AAAGAAAAGTGTGTGTGTGTGCCTAACCAAAGCATTGTTGTGCAATAATT
GAAAGGGAGAAAAAGACACTATCGTGGAGTTCGGCAGAGACCGTGGGGGA
AATGGGCTGCCGAAATCCGCGACCCTAAAAAGGCTGCTAGAGTGTGGCTT
GGCACGTTTGACACGGCAGAGGCTGCAGCTGCTGCTTATGATGCTGCTGC
TTTGAAGTTCAAAGGATCCAAAGCAAAGCTCAATTTCCCTGAACACCTTC
TTCTTGCTTCAATACCACCTTCTTCACCTTCATCTTCACCTTCACCTCAA
ACTATTAACACCAATAACAGTTATTATGCTTCTTTTTCTTCACCTCTTGC
ACCTCATGCACCAACACCATCACCACCACCACCACTTTATCAACCACAAC
CCTTACCATCACAGGAAGAAGCGTTTCCAAACCTAATGCAGTACGCACAG
CTTCTTTGGAGTAGGGACGATGATGATCTACAACGTGTTGCTTCAGGCCT
TCACCATGACTCTTTCTACGATTCCAGTTCTTCAACTTTGTTCTCTTCCT
CCTCCACTTCTTCTGTTGTGACTGAATCTGATCAACGGATTGGAGGTGAC
ACCAGTGGCTTCAAGGATTCTTGCTTTTCTAGAGGGAGTGATTTTCATGC
CAAGAATTGA
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Coding sequence (CDS) from alignment at Vu01:22470509..22474068+

>Vigun01g079400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g079400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g079400.1; organism=Vigna unguiculata; type=CDS; length=945bp; location=Sequence derived from: Vu01:22470509..22474068+ (Vigna unguiculata
ATGAAGGTTTCTTCATTGAGGCTTAGTGTTAACATTGTTGCTCAGCCGCA
AGGCTCACATTTGAATCTTTACTCAACCGCTTTCAAAGAACCTTTCATAG
AATTGAACAAGGTGGATCGAAGGCATGGAAAGAGGCCTCTCCCTTCTGAT
CATGCATCAAGGGAGAATAGGGAAGGTTTCAACTTCCCTAGCCAACAAGG
GGAGGAAGAACCTTCTTCATTCCCCTTTGTTCAACATCCAATCAATACTG
CAGATGATAGCACCCCTTCTACATATGGCCAAATACCCACTTCTACCTTG
ATTGAGACACAGGACCCATCTCAGCACCCTTTAAATCAAGGGAGAAAAAG
ACACTATCGTGGAGTTCGGCAGAGACCGTGGGGGAAATGGGCTGCCGAAA
TCCGCGACCCTAAAAAGGCTGCTAGAGTGTGGCTTGGCACGTTTGACACG
GCAGAGGCTGCAGCTGCTGCTTATGATGCTGCTGCTTTGAAGTTCAAAGG
ATCCAAAGCAAAGCTCAATTTCCCTGAACACCTTCTTCTTGCTTCAATAC
CACCTTCTTCACCTTCATCTTCACCTTCACCTCAAACTATTAACACCAAT
AACAGTTATTATGCTTCTTTTTCTTCACCTCTTGCACCTCATGCACCAAC
ACCATCACCACCACCACCACTTTATCAACCACAACCCTTACCATCACAGG
AAGAAGCGTTTCCAAACCTAATGCAGTACGCACAGCTTCTTTGGAGTAGG
GACGATGATGATCTACAACGTGTTGCTTCAGGCCTTCACCATGACTCTTT
CTACGATTCCAGTTCTTCAACTTTGTTCTCTTCCTCCTCCACTTCTTCTG
TTGTGACTGAATCTGATCAACGGATTGGAGGTGACACCAGTGGCTTCAAG
GATTCTTGCTTTTCTAGAGGGAGTGATTTTCATGCCAAGAATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription