Vigun01g137700.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun01g137700.1 vs. DB:Swiss
Match: CALM3_ORYSJ (Calmodulin-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CAM3 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.764e-60 Identity = 100/149 (67.11%), Postives = 125/149 (83.89%), Query Frame = 1 Query: 1 MAGVLTDDQIAEFQEAFCLIDKDCDGFISVDELTAIFRSIVGNPTKEEIEDMISEVDLDGNGSIDFEEFLNIMSRXXXXX-XXXXXXXAFKVFDRDQDGYISAIELRHVMMNLGERLTDEEAEQMIREADLDGDGQVSFDEFARIMMLK 444 MA LTDDQIAEF+EAF L DKD DG I+ EL + RS+ NPT+ E++DMI+EVD DGNG+IDF EFLN+M+RK+K+T EELKEAF+VFD+DQ+G+ISA ELRHVM NLGE+LTDEE E+MIREAD+DGDGQ+++DEF ++MM K Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREADVDGDGQINYDEFVKVMMAK 149
BLAST of Vigun01g137700.1 vs. DB:Swiss
Match: CALM3_ORYSI (Calmodulin-3 OS=Oryza sativa subsp. indica OX=39946 GN=CAM3 PE=3 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 7.648e-60 Identity = 99/149 (66.44%), Postives = 125/149 (83.89%), Query Frame = 1 Query: 1 MAGVLTDDQIAEFQEAFCLIDKDCDGFISVDELTAIFRSIVGNPTKEEIEDMISEVDLDGNGSIDFEEFLNIMSRXXXXX-XXXXXXXAFKVFDRDQDGYISAIELRHVMMNLGERLTDEEAEQMIREADLDGDGQVSFDEFARIMMLK 444 MA LTDDQIAEF+EAF L DKD DG I+ EL + RS+ NPT+ E++DMI+EVD DGNG+IDF EFLN+M+RK+K+T EELKEAF+VFD+DQ+G+ISA ELRHVM NLGE+LTDEE ++MIREAD+DGDGQ+++DEF ++MM K Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
BLAST of Vigun01g137700.1 vs. DB:Swiss
Match: CALM_CAPAN (Calmodulin OS=Capsicum annuum OX=4072 GN=CCM1 PE=2 SV=3) HSP 1 Score: 184.111 bits (466), Expect = 1.982e-59 Identity = 98/149 (65.77%), Postives = 125/149 (83.89%), Query Frame = 1 Query: 1 MAGVLTDDQIAEFQEAFCLIDKDCDGFISVDELTAIFRSIVGNPTKEEIEDMISEVDLDGNGSIDFEEFLNIMSRXXXXX-XXXXXXXAFKVFDRDQDGYISAIELRHVMMNLGERLTDEEAEQMIREADLDGDGQVSFDEFARIMMLK 444 MA LTDDQI+EF+EAF L DKD DG I+ EL + RS+ NPT+ E++DMI+EVD DGNG+IDF EFLN+M+RK+K+T EELKEAF+VFD+DQ+G+ISA ELRHVM NLGE+LTDEE ++MIREAD+DGDGQ+++DEF ++MM K Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
BLAST of Vigun01g137700.1 vs. DB:Swiss
Match: CALM_WHEAT (Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3) HSP 1 Score: 183.726 bits (465), Expect = 2.845e-59 Identity = 98/149 (65.77%), Postives = 125/149 (83.89%), Query Frame = 1 Query: 1 MAGVLTDDQIAEFQEAFCLIDKDCDGFISVDELTAIFRSIVGNPTKEEIEDMISEVDLDGNGSIDFEEFLNIMSRXXXXX-XXXXXXXAFKVFDRDQDGYISAIELRHVMMNLGERLTDEEAEQMIREADLDGDGQVSFDEFARIMMLK 444 MA LTD+QIAEF+EAF L DKD DG I+ EL + RS+ NPT+ E++DMI+EVD DGNG+IDF EFLN+M+RK+K+T EELKEAF+VFD+DQDG+ISA ELRHVM NLGE+LTDEE ++MIREAD+DGDGQ++++EF ++MM K Sbjct: 1 MADQLTDEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQDGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
BLAST of Vigun01g137700.1 vs. DB:Swiss
Match: CALM_HORVU (Calmodulin OS=Hordeum vulgare OX=4513 GN=CAM PE=2 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 3.174e-59 Identity = 97/149 (65.10%), Postives = 123/149 (82.55%), Query Frame = 1 Query: 1 MAGVLTDDQIAEFQEAFCLIDKDCDGFISVDELTAIFRSIVGNPTKEEIEDMISEVDLDGNGSIDFEEFLNIMSRXXX-XXXXXXXXXAFKVFDRDQDGYISAIELRHVMMNLGERLTDEEAEQMIREADLDGDGQVSFDEFARIMMLK 444 MA LTDDQIAEF+EAF L DKD DG I+ EL + RS+ NPT+ E++DMI+EVD DGNG+IDF EFLN+M+RK+K EELKEAF+VFD+DQ+G+ISA ELRHVM NLGE+LTDEE ++MIREAD+DGDGQ++++EF ++MM K Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
BLAST of Vigun01g137700.1 vs. DB:Swiss
Match: CALM2_SOYBN (Calmodulin-2 OS=Glycine max OX=3847 GN=CAM-2 PE=1 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 3.174e-59 Identity = 97/149 (65.10%), Postives = 123/149 (82.55%), Query Frame = 1 Query: 1 MAGVLTDDQIAEFQEAFCLIDKDCDGFISVDELTAIFRSIVGNPTKEEIEDMISEVDLDGNGSIDFEEFLNIMSRXXX-XXXXXXXXXAFKVFDRDQDGYISAIELRHVMMNLGERLTDEEAEQMIREADLDGDGQVSFDEFARIMMLK 444 MA LTDDQIAEF+EAF L DKD DG I+ EL + RS+ NPT+ E++DMI+EVD DGNG+IDF EFLN+M+RK+K EELKEAF+VFD+DQ+G+ISA ELRHVM NLGE+LTDEE ++MIREAD+DGDGQ++++EF ++MM K Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
BLAST of Vigun01g137700.1 vs. DB:Swiss
Match: CALM1_ORYSJ (Calmodulin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CAM1-1 PE=1 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 3.174e-59 Identity = 97/149 (65.10%), Postives = 123/149 (82.55%), Query Frame = 1 Query: 1 MAGVLTDDQIAEFQEAFCLIDKDCDGFISVDELTAIFRSIVGNPTKEEIEDMISEVDLDGNGSIDFEEFLNIMSRXXX-XXXXXXXXXAFKVFDRDQDGYISAIELRHVMMNLGERLTDEEAEQMIREADLDGDGQVSFDEFARIMMLK 444 MA LTDDQIAEF+EAF L DKD DG I+ EL + RS+ NPT+ E++DMI+EVD DGNG+IDF EFLN+M+RK+K EELKEAF+VFD+DQ+G+ISA ELRHVM NLGE+LTDEE ++MIREAD+DGDGQ++++EF ++MM K Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
BLAST of Vigun01g137700.1 vs. DB:Swiss
Match: CALM1_ORYSI (Calmodulin-1 OS=Oryza sativa subsp. indica OX=39946 GN=CAM1-1 PE=1 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 3.174e-59 Identity = 97/149 (65.10%), Postives = 123/149 (82.55%), Query Frame = 1 Query: 1 MAGVLTDDQIAEFQEAFCLIDKDCDGFISVDELTAIFRSIVGNPTKEEIEDMISEVDLDGNGSIDFEEFLNIMSRXXX-XXXXXXXXXAFKVFDRDQDGYISAIELRHVMMNLGERLTDEEAEQMIREADLDGDGQVSFDEFARIMMLK 444 MA LTDDQIAEF+EAF L DKD DG I+ EL + RS+ NPT+ E++DMI+EVD DGNG+IDF EFLN+M+RK+K EELKEAF+VFD+DQ+G+ISA ELRHVM NLGE+LTDEE ++MIREAD+DGDGQ++++EF ++MM K Sbjct: 1 MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
BLAST of Vigun01g137700.1 vs. DB:Swiss
Match: CML11_ARATH (Calmodulin-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=CML11 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 3.913e-59 Identity = 94/145 (64.83%), Postives = 121/145 (83.45%), Query Frame = 1 Query: 13 LTDDQIAEFQEAFCLIDKDCDGFISVDELTAIFRSIVGNPTKEEIEDMISEVDLDGNGSIDFEEFLNIMS-RXXXXXXXXXXXXAFKVFDRDQDGYISAIELRHVMMNLGERLTDEEAEQMIREADLDGDGQVSFDEFARIMMLK 444 LT +QI EF+EAFCL DKD DG I+ DEL + RS+ NPT++E++DMI+E+D DGNG+I+F EFLN+M+ + + EELKEAFKVFD+DQ+GYISA ELRHVM+NLGE+LTDEE +QMI+EADLDGDGQV++DEF R+MM+ Sbjct: 28 LTQEQIMEFKEAFCLFDKDGDGCITADELATVIRSLDQNPTEQELQDMITEIDSDGNGTIEFSEFLNLMANQLQETDADEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVDQMIKEADLDGDGQVNYDEFVRMMMIN 172
BLAST of Vigun01g137700.1 vs. DB:Swiss
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum OX=4690 PE=2 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 8.595e-59 Identity = 96/149 (64.43%), Postives = 123/149 (82.55%), Query Frame = 1 Query: 1 MAGVLTDDQIAEFQEAFCLIDKDCDGFISVDELTAIFRSIVGNPTKEEIEDMISEVDLDGNGSIDFEEFLNIMSRXXX-XXXXXXXXXAFKVFDRDQDGYISAIELRHVMMNLGERLTDEEAEQMIREADLDGDGQVSFDEFARIMMLK 444 MA LTDDQI+EF+EAF L DKD DG I+ EL + RS+ NPT+ E++DMI+EVD DGNG+IDF EFLN+M+RK+K EELKEAF+VFD+DQ+G+ISA ELRHVM NLGE+LTDEE ++MIREAD+DGDGQ++++EF ++MM K Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149 The following BLAST results are available for this feature:
BLAST of Vigun01g137700.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun01g137700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g137700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g137700.1; organism=Vigna unguiculata; type=mRNA; length=621bpback to top protein sequence of Vigun01g137700.1_Vu_IT97K-499-35_v1.1 >Vigun01g137700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g137700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g137700.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=149bpback to top mRNA from alignment at Vu01:31806041..31806938- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun01g137700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g137700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g137700.1; organism=Vigna unguiculata; type=mRNA; length=898bp; location=Sequence derived from: Vu01:31806041..31806938- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu01:31806041..31806938- >Vigun01g137700.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g137700.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g137700.1; organism=Vigna unguiculata; type=CDS; length=447bp; location=Sequence derived from: Vu01:31806041..31806938- (Vigna unguiculataback to top |